>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase|
           2) (Hydroperoxide dehydrase 2)
          Length = 478

 Score =  168 bits (425), Expect = 6e-42
 Identities = 78/90 (86%), Positives = 86/90 (95%)
 Frame = +1

Query: 163 REVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRVV 342
           R VPGSYG+PFVSA+RDRLDFYY QGQDKYFESR E+YGSTVVRINVPPGPFMARDPRVV
Sbjct: 10  RPVPGSYGVPFVSAVRDRLDFYYLQGQDKYFESRAERYGSTVVRINVPPGPFMARDPRVV 69

Query: 343 AVLDAKSFPVLFDVTKVEKKNLFTGTYMPS 432
           A+LDAKSFPVLFDV KVEK+++FTGT+MPS
Sbjct: 70  ALLDAKSFPVLFDVAKVEKRDVFTGTFMPS 99

>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase) (Hydroperoxide dehydrase)
          Length = 536

 Score =  141 bits (355), Expect = 8e-34
 Identities = 63/98 (64%), Positives = 85/98 (86%)
 Frame = +1

Query: 139 SDEGSLVPREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPF 318
           SDE +L  R++PG YGLP +  I+DRLD++Y QG++++F+SR++KY STV R N+PPGPF
Sbjct: 65  SDETTLPIRQIPGDYGLPGIGPIQDRLDYFYNQGREEFFKSRLQKYKSTVYRANMPPGPF 124

Query: 319 MARDPRVVAVLDAKSFPVLFDVTKVEKKNLFTGTYMPS 432
           +A +PRV+ +LDAKSFPVLFD++KVEKK+LFTGTYMPS
Sbjct: 125 IASNPRVIVLLDAKSFPVLFDMSKVEKKDLFTGTYMPS 162

>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase) (Hydroperoxide dehydrase)
          Length = 518

 Score =  134 bits (337), Expect = 9e-32
 Identities = 61/99 (61%), Positives = 79/99 (79%)
 Frame = +1

Query: 136 RSDEGSLVPREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGP 315
           R+    L  R +PG+YGLP V  I+DR D++Y QG +++F+SR+ KY STV R+N+PPG 
Sbjct: 46  RTGSKDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGA 105

Query: 316 FMARDPRVVAVLDAKSFPVLFDVTKVEKKNLFTGTYMPS 432
           F+A +P+VVA+LD KSFPVLFDV KVEKK+LFTGTYMPS
Sbjct: 106 FIAENPQVVALLDGKSFPVLFDVDKVEKKDLFTGTYMPS 144

>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)|
           (Rubber particle protein) (RPP)
          Length = 473

 Score =  134 bits (336), Expect = 1e-31
 Identities = 61/98 (62%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
 Frame = +1

Query: 142 DEGSLVPREVPGSYGLPFVSAIRDRLDFYYFQG-QDKYFESRVEKYGSTVVRINVPPGPF 318
           D  S   RE+PGSYG+PF   I+DRL+++Y  G +D+YF SR++KY STV R N+PPGPF
Sbjct: 2   DPSSKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPF 61

Query: 319 MARDPRVVAVLDAKSFPVLFDVTKVEKKNLFTGTYMPS 432
           ++ +P+V+ +LDAKSFP+LFDV+KVEKK+LFTGTYMPS
Sbjct: 62  VSSNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPS 99

>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase|
           4) (Hydroperoxide dehydrase 4)
          Length = 510

 Score =  127 bits (320), Expect = 9e-30
 Identities = 58/103 (56%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
 Frame = +1

Query: 127 GMARSDEGSLVPREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYG-STVVRINV 303
           G ++     L+ RE+PG YG+PF+S +RDRLD+YYFQG D++F SRV ++G +TV+R+N+
Sbjct: 18  GQSKLSPSGLLIREIPGGYGVPFLSPLRDRLDYYYFQGADEFFRSRVARHGGATVLRVNM 77

Query: 304 PPGPFMARDPRVVAVLDAKSFPVLFDVTKVEKKNLFTGTYMPS 432
           PPGPF+A DPRVVA+LDA+SF VL D + V+K +   GT+MPS
Sbjct: 78  PPGPFLAGDPRVVALLDARSFRVLLDDSMVDKADTLDGTFMPS 120

>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase 1) (Hydroperoxide dehydrase 1)
          Length = 512

 Score =  121 bits (303), Expect = 8e-28
 Identities = 58/91 (63%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
 Frame = +1

Query: 163 REVPGSYGLPFVSAIRDRLDFYYFQG-QDKYFESRVEKYGSTVVRINVPPGPFMARDPRV 339
           R+VPG YG P V AIRDR +++Y  G +D +F +RV  + STVVR+N+PPGPF+ARDPRV
Sbjct: 48  RKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVARDPRV 107

Query: 340 VAVLDAKSFPVLFDVTKVEKKNLFTGTYMPS 432
           VA+LDA SFPVLFD + V+K +LFTGT+MPS
Sbjct: 108 VALLDAASFPVLFDTSLVDKTDLFTGTFMPS 138

>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase|
           3) (Hydroperoxide dehydrase 3)
          Length = 500

 Score =  120 bits (301), Expect = 1e-27
 Identities = 54/91 (59%), Positives = 75/91 (82%), Gaps = 1/91 (1%)
 Frame = +1

Query: 163 REVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYG-STVVRINVPPGPFMARDPRV 339
           RE+PG YG+PF S +RDRLD++YFQG ++YF SRV ++G +TV+R+N+PPGPF++ +PRV
Sbjct: 30  REIPGGYGVPFFSPLRDRLDYFYFQGAEEYFRSRVARHGGATVLRVNMPPGPFISGNPRV 89

Query: 340 VAVLDAKSFPVLFDVTKVEKKNLFTGTYMPS 432
           VA+LDA+SF VL D + V+K +   GTYMPS
Sbjct: 90  VALLDARSFRVLLDDSMVDKADTLDGTYMPS 120

>TRPC_XANCP (Q8PD70) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)|
          Length = 265

 Score = 32.3 bits (72), Expect = 0.50
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +1

Query: 160 PREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRV 339
           P ++  SY     S +    D Y+FQG D Y +   E     V+R +    P+   + RV
Sbjct: 76  PADIAVSYEFGGASCLSVLTDMYFFQGSDAYLQQAREACTLPVLRKDFTVDPYQVYEARV 135

Query: 340 V 342
           +
Sbjct: 136 L 136

>CP131_DROME (Q9VFJ0) Probable cytochrome P450 313a1 (EC 1.14.-.-)|
           (CYPCCCXIIIA1)
          Length = 492

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +1

Query: 166 EVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRVV 342
           ++PG  GLP + +  + +  Y  + +  +    + KYGST++    P    + RDP+VV
Sbjct: 31  KIPGPIGLPILGSSLENIITY--KRKLSFRTKYLNKYGSTILTWMGPVPFIVTRDPKVV 87

>SPC34_SCHPO (O14285) DASH complex subunit spc34 (Outer kinetochore protein|
           spc34)
          Length = 164

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 193 FVSAIRDRLDFYYFQGQDKYFESRVEKY 276
           +V+ I + LD Y  QG  +Y E+ VEKY
Sbjct: 75  YVACIEELLDIYPMQGGREYLETLVEKY 102

>CTLA4_CANFA (Q9XSI1) Cytotoxic T-lymphocyte protein 4 precursor (Cytotoxic|
           T-lymphocyte-associated antigen 4) (CTLA-4) (CD152
           antigen)
          Length = 223

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -3

Query: 404 FFFSTLVTSKSTGKLLASSTATTRGSRAMKGPGGTLMRTTVEPYF 270
           FF+S L+T+ S  K+L   +  T G      P G       +PYF
Sbjct: 175 FFYSFLITAVSLSKMLKKRSPLTTGVYVKMPPTGPECEKQFQPYF 219

>GBRB3_DROME (Q08832) Gamma-aminobutyric-acid receptor beta-like subunit|
           precursor (GABA(A) receptor)
          Length = 496

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 20/82 (24%), Positives = 35/82 (42%)
 Frame = +1

Query: 178 SYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRVVAVLDA 357
           +YG+ F + +   +D +Y+    +     +E YG TV  + +   P   R    V   + 
Sbjct: 165 TYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRG---VEDAEL 221

Query: 358 KSFPVLFDVTKVEKKNLFTGTY 423
             F ++   T   K+ L TG Y
Sbjct: 222 PQFTIIGYETNDRKERLATGVY 243

>C90A1_ARATH (Q42569) Cytochrome P450 90A1 (EC 1.14.-.-)|
          Length = 472

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 172 PGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGS 282
           PGS GLP +      +  Y  +  + + + RV +YGS
Sbjct: 33  PGSLGLPLIGETFQLIGAYKTENPEPFIDERVARYGS 69

>RRMJ_METAC (Q8TR92) Ribosomal RNA large subunit methyltransferase J (EC|
           2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S
           rRNA m2U2552 methyltransferase)
          Length = 272

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 13/51 (25%)
 Frame = +1

Query: 208 RDRLDFYYFQGQDKYFESR-------------VEKYGSTVVRINVPPGPFM 321
           RDR D+YY Q +++ + SR             V K G +VV +   PG ++
Sbjct: 3   RDRRDYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWL 53

>TRPC_XYLFT (Q87EX2) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)|
          Length = 264

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +1

Query: 160 PREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRV 339
           P E+  SY L   S +    D ++F+G D Y     +     V+R +    P+   + RV
Sbjct: 76  PAEIAISYELGGASCLSVLTDVHFFKGHDDYLSQARDACTLPVLRKDFTIDPYQVYEARV 135

Query: 340 V 342
           +
Sbjct: 136 L 136

>TRPC_XYLFA (Q9PGT5) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)|
          Length = 264

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +1

Query: 160 PREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRV 339
           P E+  SY L   S +    D ++F+G D Y     +     V+R +    P+   + RV
Sbjct: 76  PAEIAISYELGGASCLSVLTDVHFFKGHDDYLSQARDACTLPVLRKDFTIDPYQVYEARV 135

Query: 340 V 342
           +
Sbjct: 136 L 136

>RRMJ_METMA (Q8PUP4) Ribosomal RNA large subunit methyltransferase J (EC|
           2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S
           rRNA m2U2552 methyltransferase)
          Length = 268

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 13/51 (25%)
 Frame = +1

Query: 208 RDRLDFYYFQGQDKYFESR-------------VEKYGSTVVRINVPPGPFM 321
           RDR D+YY Q +++ + SR             V K G +VV +   PG ++
Sbjct: 3   RDRRDYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWL 53


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,065,490
Number of Sequences: 219361
Number of extensions: 553761
Number of successful extensions: 1795
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1791
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)