ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast60d09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide oxidoreductase (PCR) Length = 1490 Score = 835 bits (421), Expect = 0.0 Identities = 435/437 (99%), Gaps = 2/437 (0%) Strand = Plus / Plus Query: 22 gcagcacagtgcactcgagttcgagctcgttgaactcctgcagtgcagtgctagctagcg 81 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11 gcagcacagtgcactcgagttcgagctcgttgaactcctgcagtgcagtgctagctagcg 70 Query: 82 acagtccaagctcaccgtcatccatggctctccagcttctcccctccaccctctccgtcc 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71 acagtccaagctcaccgtcatccatggctctccagcttctcccctccaccctctccgtcc 130 Query: 142 ccaagaagggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcg 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131 ccaagaagggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcg 190 Query: 202 tgagcagcaaggcgaagaaggcgtcgctggcggtgaggacgcaggtggccacggcgcctt 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 tgagcagcaaggcgaagaaggcgtcgctggcggtgaggacgcaggtggccacggcgcctt 250 Query: 262 cgccggtgacgacgagcccgggctcgaccgcgtcgtcgccgagcggcaagaagacgctgc 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 cgccggtgacgacgagcccgggctcgaccgcgtcgtcgccgagcggcaagaagacgctgc 310 Query: 322 ggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggccaagg 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 ggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggccaagg 370 Query: 382 cgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctc-aggcct 440 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 371 cgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggcct 430 Query: 441 cc-aggcggccaaggcg 456 || |||||||||||||| Sbjct: 431 ccaaggcggccaaggcg 447
>emb|X76532.1|TAPWR5PI Triticum aestivium pWR5 RNA for protochlorophyilide reductase Length = 1484 Score = 557 bits (281), Expect = e-155 Identities = 349/369 (94%), Gaps = 2/369 (0%) Strand = Plus / Plus Query: 90 agctcaccgtcatccatggctctccagcttctcccctccaccctctccgtccccaagaag 149 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 58 agctcaccgtcatccatggctctccagctcctcccctccaccctctccgtccccaagaag 117 Query: 150 ggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcgtgagcagc 209 || |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||| Sbjct: 118 ggtagcagcatgggcgcggcggcagtgaaggacacggcggcgttcctgggcgtgagcagc 177 Query: 210 aaggcgaagaaggcgtcgctggcggtgaggacgcaggtggccacggcgccttcgccggtg 269 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 178 aaggcgaagaaggcgtcgctagcggtgaggacgcaggtggccacggcgccttcgtcggtg 237 Query: 270 acgacgagcccgggctcgaccgcgtcgtcgccgagcggcaagaagacgctgcggcagggc 329 |||||||||||||||||| | || || ||||||||||||||||||||||||||||||| Sbjct: 238 acgacgagcccgggctcggcgacggcgaagccgagcggcaagaagacgctgcggcagggc 297 Query: 330 gtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggccaaggcgctggcc 389 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 298 gtggtggtgatcacgggcgcgtcgtccgggctgggtctggcggcggccaaggcgctggca 357 Query: 390 gagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctc-aggcctcc-aggcg 447 |||||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||| Sbjct: 358 gagacgggcaagtggcacgtggtcatggcgtgccgcgacttcctcaaggcatccaaggcg 417 Query: 448 gccaaggcg 456 ||||||||| Sbjct: 418 gccaaggcg 426
>emb|X17067.1|ASPCR Avena sativa mRNA for protochlorophyllide reductase Length = 1146 Score = 159 bits (80), Expect = 1e-35 Identities = 101/108 (93%) Strand = Plus / Plus Query: 328 gcgtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggccaaggcgctgg 387 ||||||||||||||||||||||||| || || || ||||| ||||||||||||||||||| Sbjct: 1 gcgtggtggtgatcacgggcgcgtcgtcgggcctcggcctcgcggcggccaaggcgctgg 60 Query: 388 ccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctca 435 | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 61 cggagacgggcaagtggcacgtggtcatggcgtgccgcgacttcctca 108
>ref|XM_474360.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1164 Score = 153 bits (77), Expect = 6e-34 Identities = 113/125 (90%) Strand = Plus / Plus Query: 309 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 368 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 202 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 261 Query: 369 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 428 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 262 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 321 Query: 429 ttcct 433 ||||| Sbjct: 322 ttcct 326
>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01, complete sequence Length = 133331 Score = 153 bits (77), Expect = 6e-34 Identities = 113/125 (90%) Strand = Plus / Plus Query: 309 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 368 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 4144 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 4203 Query: 369 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 428 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 4204 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 4263 Query: 429 ttcct 433 ||||| Sbjct: 4264 ttcct 4268
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 153 bits (77), Expect = 6e-34 Identities = 113/125 (90%) Strand = Plus / Plus Query: 309 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 368 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 34698582 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 34698641 Query: 369 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 428 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 34698642 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 34698701 Query: 429 ttcct 433 ||||| Sbjct: 34698702 ttcct 34698706
>dbj|AK104855.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B11, full insert sequence Length = 1384 Score = 153 bits (77), Expect = 6e-34 Identities = 113/125 (90%) Strand = Plus / Plus Query: 309 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 368 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 274 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 333 Query: 369 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 428 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 334 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 393 Query: 429 ttcct 433 ||||| Sbjct: 394 ttcct 398
>dbj|AK103940.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G08, full insert sequence Length = 1384 Score = 153 bits (77), Expect = 6e-34 Identities = 113/125 (90%) Strand = Plus / Plus Query: 309 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 368 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 274 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 333 Query: 369 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 428 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 334 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 393 Query: 429 ttcct 433 ||||| Sbjct: 394 ttcct 398
>dbj|AK065236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H23, full insert sequence Length = 1385 Score = 153 bits (77), Expect = 6e-34 Identities = 113/125 (90%) Strand = Plus / Plus Query: 309 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 368 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 275 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 334 Query: 369 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 428 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 335 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 394 Query: 429 ttcct 433 ||||| Sbjct: 395 ttcct 399
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete sequence Length = 100836 Score = 153 bits (77), Expect = 6e-34 Identities = 113/125 (90%) Strand = Plus / Plus Query: 309 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 368 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 96506 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 96565 Query: 369 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 428 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 96566 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 96625 Query: 429 ttcct 433 ||||| Sbjct: 96626 ttcct 96630
>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete sequence Length = 103264 Score = 153 bits (77), Expect = 6e-34 Identities = 113/125 (90%) Strand = Plus / Plus Query: 309 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 368 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 41602 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 41661 Query: 369 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 428 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 41662 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 41721 Query: 429 ttcct 433 ||||| Sbjct: 41722 ttcct 41726
>dbj|AK103943.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G12, full insert sequence Length = 1384 Score = 145 bits (73), Expect = 1e-31 Identities = 112/125 (89%) Strand = Plus / Plus Query: 309 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 368 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 274 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 333 Query: 369 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 428 |||||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||| Sbjct: 334 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtggtggcgtgccgcgac 393 Query: 429 ttcct 433 ||||| Sbjct: 394 ttcct 398
>ref|NM_197169.1| Oryza sativa (japonica cultivar-group) putative dehydrogenase (OSJNBa0017E08.8), mRNA Length = 1564 Score = 131 bits (66), Expect = 2e-27 Identities = 114/130 (87%) Strand = Plus / Plus Query: 306 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 365 |||||| |||||||||| ||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 306 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 365 Query: 366 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 425 || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 366 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 425 Query: 426 gacttcctca 435 |||||||||| Sbjct: 426 gacttcctca 435
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 131 bits (66), Expect = 2e-27 Identities = 114/130 (87%) Strand = Plus / Minus Query: 306 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 365 |||||| |||||||||| ||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 120731 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 120672 Query: 366 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 425 || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 120671 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 120612 Query: 426 gacttcctca 435 |||||||||| Sbjct: 120611 gacttcctca 120602
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 131 bits (66), Expect = 2e-27 Identities = 114/130 (87%) Strand = Plus / Plus Query: 306 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 365 |||||| |||||||||| ||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 18385962 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 18386021 Query: 366 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 425 || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 18386022 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 18386081 Query: 426 gacttcctca 435 |||||||||| Sbjct: 18386082 gacttcctca 18386091
>dbj|AK068143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134C06, full insert sequence Length = 2944 Score = 131 bits (66), Expect = 2e-27 Identities = 114/130 (87%) Strand = Plus / Plus Query: 306 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 365 |||||| |||||||||| ||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 1506 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 1565 Query: 366 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 425 || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 1566 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 1625 Query: 426 gacttcctca 435 |||||||||| Sbjct: 1626 gacttcctca 1635
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 131 bits (66), Expect = 2e-27 Identities = 114/130 (87%) Strand = Plus / Plus Query: 306 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 365 |||||| |||||||||| ||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 18396015 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 18396074 Query: 366 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 425 || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 18396075 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 18396134 Query: 426 gacttcctca 435 |||||||||| Sbjct: 18396135 gacttcctca 18396144
>emb|AJ567760.1|ZMA567760 Zea mays partial mRNA for NADPH-protochlorophyllide oxidoreductase (por gene) Length = 1116 Score = 91.7 bits (46), Expect = 2e-15 Identities = 109/130 (83%) Strand = Plus / Plus Query: 306 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 365 ||||||||||| || || ||||| || ||| ||||| |||||||| ||||| || ||| Sbjct: 154 ggcaagaagaccctccgcaagggcacggcggtcatcaccggcgcgtcgtccggcctcggc 213 Query: 366 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 425 || || |||| ||||| ||||| ||||| ||||||||||||||| ||||||| |||||| Sbjct: 214 ctcgccacggcgaaggccctggcggagacaggcaagtggcacgtcatcatggcctgccgc 273 Query: 426 gacttcctca 435 |||||||||| Sbjct: 274 gacttcctca 283
>emb|X84738.1|HVNADPHPO H.vulgare mRNA for NADPH-protochlorophyllide oxidoreductase Length = 1345 Score = 89.7 bits (45), Expect = 8e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 339 atcacgggcgcgtcatccgggctgggcctggcggcggccaaggcgctggccgagacgggc 398 |||||||||||||| || || || ||||| || |||||||||| ||||| ||| | ||| Sbjct: 313 atcacgggcgcgtcgtcgggcctcggcctcgccacggccaaggccctggcggagtcaggc 372 Query: 399 aagtggcacgtcgtcatggcgtgccgcgacttcctca 435 |||||||||||| |||||||||||||||||| ||||| Sbjct: 373 aagtggcacgtcatcatggcgtgccgcgactacctca 409
>gb|AY103784.1| Zea mays PCO066646 mRNA sequence Length = 1664 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 345 ggcgcgtcatccgggctgggcctggcggcggccaaggcgctggccgagacgggcaagtgg 404 |||||||| ||||| || |||||||| |||| ||||| ||||| ||||| ||||||||| Sbjct: 375 ggcgcgtcgtccggcctcggcctggccacggcgaaggccctggcggagaccggcaagtgg 434 Query: 405 cacgtcgtcatggcgtgccgcga 427 |||||| ||||||| |||||||| Sbjct: 435 cacgtcatcatggcctgccgcga 457
>gb|AY862405.1| Musa acuminata NADPH-protochlorophyllide oxidoreductase gene, complete cds Length = 1619 Score = 69.9 bits (35), Expect = 7e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 317 gctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggc 376 ||||||| ||||||||||||| ||||| ||||| || || || || ||||| || || || Sbjct: 423 gctgcggaagggcgtggtggtaatcaccggcgcctcctcgggactcggcctcgccgctgc 482 Query: 377 caaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctca 435 |||||| || |||||||| | || |||||||| |||||||| ||| | |||||||||| Sbjct: 483 caaggctctcgccgagaccgagaaatggcacgttgtcatggcctgcagggacttcctca 541
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 367 tggcggcggccaaggcgctggccg 390 |||||||||||||||||||||||| Sbjct: 5142952 tggcggcggccaaggcgctggccg 5142975
>gb|AF223646.1| Uncultured bacterium plasmid pAH115 esterase gene, complete cds Length = 2142 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 282 ggctcgaccgcgtcgtcgccga 303 |||||||||||||||||||||| Sbjct: 140 ggctcgaccgcgtcgtcgccga 119
>ref|XM_957279.1| Neurospora crassa OR74A hypothetical protein (NCU06338.1) partial mRNA Length = 5772 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 ggcgtgagcagcaaggcgaagaagg 222 ||||||||||||||||| ||||||| Sbjct: 5698 ggcgtgagcagcaaggcaaagaagg 5722
>ref|XM_326192.1| Neurospora crassa OR74A hypothetical protein (NCU06338.1) partial mRNA Length = 5772 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 ggcgtgagcagcaaggcgaagaagg 222 ||||||||||||||||| ||||||| Sbjct: 5698 ggcgtgagcagcaaggcaaagaagg 5722
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 caggcggccaaggcgcggcat 462 ||||||||||||||||||||| Sbjct: 911611 caggcggccaaggcgcggcat 911631
>gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosome 1, complete sequence Length = 164612 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 cttctcccctccaccctctcc 137 ||||||||||||||||||||| Sbjct: 42019 cttctcccctccaccctctcc 41999
>gb|AE005920.1| Caulobacter crescentus CB15 section 246 of 359 of the complete genome Length = 10062 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 362 gggcctggcggcggccaaggcgctg 386 |||||||||||||| |||||||||| Sbjct: 7333 gggcctggcggcggtcaaggcgctg 7309
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 367 tggcggcggccaaggcgctggccga 391 ||||||| ||||||||||||||||| Sbjct: 4597581 tggcggcagccaaggcgctggccga 4597605
>gb|AE005001.1| Halobacterium sp. NRC-1 section 32 of 170 of the complete genome Length = 10670 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 404 gcacgtcgtcatggcgtgccg 424 ||||||||||||||||||||| Sbjct: 6496 gcacgtcgtcatggcgtgccg 6476
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 374 ggccaaggcgctggccgagac 394 ||||||||||||||||||||| Sbjct: 3414909 ggccaaggcgctggccgagac 3414929
>gb|AY260760.3| Streptomyces hygroscopicus subsp. yingchengensis Shy1 (shy1), CvhE (cvhE), CvhD (cvhD), CvhC (cvhC), CvhB (cvhB), CvhA (cvhA), Shy26 (shy26), Shy4 (shy4), Shy5 (shy5), Shy6 (shy6), Shy7 (shy7), Shy8 (shy8), Shy9 (shy9), Shy10 (shy10), Shy11 (shy11), Shy12 (shy12), Shy13 (shy13), Shy14 (shy14), Shy15 (shy15), Shy16 (shy16), Shy17 (shy17), Shy18 (shy18), Hmr19 (hmr19), Shy20 (shy20), Shy21 (shy21), Shy22 (shy22), Shy23 (shy23), Shy24 (shy24), and Shy25 (shy25) genes, complete cds Length = 36687 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 gctgggcctggcggcggccaa 379 ||||||||||||||||||||| Sbjct: 2550 gctgggcctggcggcggccaa 2530
>ref|XM_479797.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2387 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 agcagcaaggcgaagaaggcgtcgctgg 231 |||||||||||||| |||||| |||||| Sbjct: 1676 agcagcaaggcgaacaaggcggcgctgg 1703
>gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0036C12, complete sequence Length = 145517 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 tggcggcggccaaggcgctggccg 390 ||||||||||||||||| |||||| Sbjct: 62502 tggcggcggccaaggcggtggccg 62525
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10, complete sequence Length = 134183 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ctcgaccgcgtcgtcgccga 303 |||||||||||||||||||| Sbjct: 50427 ctcgaccgcgtcgtcgccga 50446
>gb|AC162446.2| Mus musculus chromosome 8, clone RP23-410L16, complete sequence Length = 197906 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 gctgcggcagggcgtggtgg 336 |||||||||||||||||||| Sbjct: 132507 gctgcggcagggcgtggtgg 132526
>ref|XM_587808.2| PREDICTED: Bos taurus similar to MICAL-like 2 isoform 1 (LOC510644), mRNA Length = 3523 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 ccgcgacttcctcaggcctccagg 445 ||||| |||||||||||||||||| Sbjct: 1263 ccgcgtcttcctcaggcctccagg 1240
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcggccaaggcgctggccga 391 |||||||||||||||||||| Sbjct: 2105778 gcggccaaggcgctggccga 2105797
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 aaggcgaagaaggcgtcgctggcg 233 |||| ||||||||||||||||||| Sbjct: 3274483 aaggggaagaaggcgtcgctggcg 3274506
>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence Length = 211910 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ctctccagcttctcccctcc 128 |||||||||||||||||||| Sbjct: 118208 ctctccagcttctcccctcc 118189
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 402 tggcacgtcgtcatggcgtgccgc 425 ||||||||||||||||| |||||| Sbjct: 373356 tggcacgtcgtcatggcttgccgc 373379
>ref|XM_982866.1| PREDICTED: Mus musculus microtubule associated serine/threonine kinase 3, transcript variant 2 (Mast3), mRNA Length = 4425 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gctgcggcagggcgtggtgg 336 |||||||||||||||||||| Sbjct: 3427 gctgcggcagggcgtggtgg 3408
>ref|XM_888290.2| PREDICTED: Mus musculus microtubule associated serine/threonine kinase 3, transcript variant 2 (Mast3), mRNA Length = 4425 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gctgcggcagggcgtggtgg 336 |||||||||||||||||||| Sbjct: 3427 gctgcggcagggcgtggtgg 3408
>ref|XM_979773.1| PREDICTED: Mus musculus microtubule associated serine/threonine kinase 3 (Mast3), mRNA Length = 4425 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gctgcggcagggcgtggtgg 336 |||||||||||||||||||| Sbjct: 3427 gctgcggcagggcgtggtgg 3408
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 gcagggcgtggtggtgatca 342 |||||||||||||||||||| Sbjct: 4141015 gcagggcgtggtggtgatca 4141034
>gb|AC126798.3| Mus musculus BAC clone RP24-229N7 from chromosome 1, complete sequence Length = 172452 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ccccaagaagggcagcagca 159 |||||||||||||||||||| Sbjct: 124088 ccccaagaagggcagcagca 124069
>gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, complete sequence Length = 223130 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 gcagtgcagtgctagctagc 80 |||||||||||||||||||| Sbjct: 181503 gcagtgcagtgctagctagc 181484
>emb|CR666827.2|CNS0FDHT Tetraodon nigroviridis full-length cDNA Length = 555 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ggtgaaggacacggcggcgt 192 |||||||||||||||||||| Sbjct: 224 ggtgaaggacacggcggcgt 205
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 ggctgggcctggcggcggcc 377 |||||||||||||||||||| Sbjct: 1077017 ggctgggcctggcggcggcc 1077036
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ggcggcggccaaggcgctgg 387 |||||||||||||||||||| Sbjct: 1942139 ggcggcggccaaggcgctgg 1942158
>emb|X99258.1|MTMOB M.tuberculosis genomic sequence containing 4 ORF's Length = 4082 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcggccaaggcgctggccga 391 |||||||||||||||||||| Sbjct: 3778 gcggccaaggcgctggccga 3797
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcggccaaggcgctggccga 391 |||||||||||||||||||| Sbjct: 29855 gcggccaaggcgctggccga 29874
>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14 Length = 291050 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcggccaaggcgctggccga 391 |||||||||||||||||||| Sbjct: 184766 gcggccaaggcgctggccga 184785
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ctggcggcggccaaggcgctggcc 389 |||||||||||| ||||||||||| Sbjct: 40231 ctggcggcggccgaggcgctggcc 40254
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 gctgggcctggcggcggcca 378 |||||||||||||||||||| Sbjct: 107449 gctgggcctggcggcggcca 107468
>gb|AF498106.1| Aedes aegypti relish R7 isoform mRNA, complete cds; alternatively spliced Length = 2730 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 agctcgttgaactcctgcag 64 |||||||||||||||||||| Sbjct: 1390 agctcgttgaactcctgcag 1409
>gb|AF498105.1| Aedes aegypti relish R6 isoform mRNA, complete cds; alternatively spliced Length = 3280 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 agctcgttgaactcctgcag 64 |||||||||||||||||||| Sbjct: 1941 agctcgttgaactcctgcag 1960
>gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome 12, complete sequence Length = 201550 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 gcagtgcagtgctagctagc 80 |||||||||||||||||||| Sbjct: 2135 gcagtgcagtgctagctagc 2154
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 377 caaggcgctggccgagacgggcaa 400 |||||||||||||||||| ||||| Sbjct: 171756 caaggcgctggccgagaccggcaa 171779
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 gcagggcgtggtggtgatca 342 |||||||||||||||||||| Sbjct: 1108145 gcagggcgtggtggtgatca 1108126
>gb|AE011995.1| Xanthomonas axonopodis pv. citri str. 306, section 373 of 469 of the complete genome Length = 11692 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 gcagggcgtggtggtgatca 342 |||||||||||||||||||| Sbjct: 3837 gcagggcgtggtggtgatca 3856
>gb|AE012533.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 441 of 460 of the complete genome Length = 6066 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gcggcggccaaggcgctggc 388 |||||||||||||||||||| Sbjct: 5752 gcggcggccaaggcgctggc 5771
>gb|AE012453.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 361 of 460 of the complete genome Length = 10452 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 gcagggcgtggtggtgatca 342 |||||||||||||||||||| Sbjct: 3550 gcagggcgtggtggtgatca 3569
>dbj|AK140821.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130034L06 product:weakly similar to Sast-pending protein [Mus musculus], full insert sequence Length = 4263 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gctgcggcagggcgtggtgg 336 |||||||||||||||||||| Sbjct: 3507 gctgcggcagggcgtggtgg 3488
>gb|AC091729.4| Homo sapiens BAC clone RP13-580H13 from 7, complete sequence Length = 104285 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccagcttctcccctccaccc 132 |||||||||||||||||||| Sbjct: 51908 ccagcttctcccctccaccc 51927
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 gcaaggcgaagaaggcgtcg 227 |||||||||||||||||||| Sbjct: 1457481 gcaaggcgaagaaggcgtcg 1457500
>gb|DQ384244.1| Olyra latifolia tasselseed2-like short-chain dehydrogenase/reductase gene, partial cds Length = 759 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 248 ggccacggcgccttcgccggtgacgacg 275 ||||||| ||||||||||| |||||||| Sbjct: 565 ggccacgacgccttcgccgctgacgacg 592
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gcggcggccaaggcgctggc 388 |||||||||||||||||||| Sbjct: 4949256 gcggcggccaaggcgctggc 4949275 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 gcagggcgtggtggtgatca 342 |||||||||||||||||||| Sbjct: 978778 gcagggcgtggtggtgatca 978759
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 agcagcaaggcgaagaaggcgtcgctgg 231 |||||||||||||| |||||| |||||| Sbjct: 971854 agcagcaaggcgaacaaggcggcgctgg 971881
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 tggcggcggccaaggcgctggccg 390 ||||||||||||||||| |||||| Sbjct: 5664502 tggcggcggccaaggcggtggccg 5664479
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 tggcggcggccaaggcgctggccg 390 ||||||||||||||||| |||||| Sbjct: 16738392 tggcggcggccaaggcggtggccg 16738415 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ctcgaccgcgtcgtcgccga 303 |||||||||||||||||||| Sbjct: 16551688 ctcgaccgcgtcgtcgccga 16551707
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cgccttcgccggtgacgacg 275 |||||||||||||||||||| Sbjct: 2286225 cgccttcgccggtgacgacg 2286244
>gb|AC068547.7| Homo sapiens BAC clone RP11-458J7 from 2, complete sequence Length = 185555 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 tctccagcttctcccctccaccct 133 ||||||||||||| |||||||||| Sbjct: 85347 tctccagcttctctcctccaccct 85370
>gb|AE004696.1| Pseudomonas aeruginosa PAO1, section 257 of 529 of the complete genome Length = 14449 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ggcgtcgctggcggtgagga 240 |||||||||||||||||||| Sbjct: 4846 ggcgtcgctggcggtgagga 4865
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 cgaccgcgtcgtcgccgagc 305 |||||||||||||||||||| Sbjct: 1012168 cgaccgcgtcgtcgccgagc 1012187
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 402 tggcacgtcgtcatggcgtgccgc 425 ||||||||||||||||| |||||| Sbjct: 2097905 tggcacgtcgtcatggcttgccgc 2097882
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ctcgaccgcgtcgtcgccga 303 |||||||||||||||||||| Sbjct: 2286263 ctcgaccgcgtcgtcgccga 2286282 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ctcgaccgcgtcgtcgccga 303 |||||||||||||||||||| Sbjct: 1600910 ctcgaccgcgtcgtcgccga 1600929
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 tggcggcggccaaggcgctggccg 390 ||||||||||||||||| |||||| Sbjct: 56649 tggcggcggccaaggcggtggccg 56626
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470F10 Length = 185294 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 agcagcaaggcgaagaaggcgtcgctgg 231 |||||||||||||| |||||| |||||| Sbjct: 134592 agcagcaaggcgaacaaggcggcgctgg 134619
>dbj|AK172971.1| Mus musculus mRNA for mKIAA0561 protein Length = 1425 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gctgcggcagggcgtggtgg 336 |||||||||||||||||||| Sbjct: 703 gctgcggcagggcgtggtgg 684
>gb|AE005112.1| Halobacterium sp. NRC-1 section 143 of 170 of the complete genome Length = 12204 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 cgaccgcgtcgtcgccgagc 305 |||||||||||||||||||| Sbjct: 5711 cgaccgcgtcgtcgccgagc 5692
>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_B05 Length = 144799 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 agcagcaaggcgaagaaggcgtcgctgg 231 |||||||||||||| |||||| |||||| Sbjct: 381 agcagcaaggcgaacaaggcggcgctgg 408
>emb|X80268.1|MY4547 M.tuberculosis 45/47 gene Length = 2061 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcggccaaggcgctggccga 391 |||||||||||||||||||| Sbjct: 1904 gcggccaaggcgctggccga 1923
>gb|AF013569.1|AF013569 Mycobacterium bovis fibronectin attachment protein (FAP-B) gene, complete cds Length = 1123 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gcggccaaggcgctggccga 391 |||||||||||||||||||| Sbjct: 901 gcggccaaggcgctggccga 920
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 gctcgaccgcgtcgtcgccgagcg 306 ||||||||| |||||||||||||| Sbjct: 1756600 gctcgaccgggtcgtcgccgagcg 1756623
>dbj|AK067392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104G24, full insert sequence Length = 2387 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 agcagcaaggcgaagaaggcgtcgctgg 231 |||||||||||||| |||||| |||||| Sbjct: 1676 agcagcaaggcgaacaaggcggcgctgg 1703
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 gcagggcgtggtggtgatca 342 |||||||||||||||||||| Sbjct: 1141678 gcagggcgtggtggtgatca 1141659
>gb|BC024265.1| Mus musculus microtubule associated serine/threonine kinase 3, mRNA (cDNA clone IMAGE:5137303), complete cds Length = 3042 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gctgcggcagggcgtggtgg 336 |||||||||||||||||||| Sbjct: 1139 gctgcggcagggcgtggtgg 1120
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 ggcctggcggcggccaaggcgctg 386 ||||||| |||||||||||||||| Sbjct: 4462203 ggcctggtggcggccaaggcgctg 4462180 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,865,060 Number of Sequences: 3902068 Number of extensions: 3865060 Number of successful extensions: 91750 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88336 Number of HSP's gapped (non-prelim): 3411 length of query: 462 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 440 effective length of database: 17,147,199,772 effective search space: 7544767899680 effective search space used: 7544767899680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
