ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast60d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 99 4e-21
2FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 94 2e-19
3APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 32 0.51
4APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 31 1.1
5HLT_VIBPA (Q99289) Thermolabile hemolysin precursor (TL) (Lecith... 29 4.3
6LTBP1_RAT (Q00918) Latent transforming growth factor beta-bindin... 29 5.7
7KLF6_RAT (O35819) Krueppel-like factor 6 (Core promoter element-... 28 7.4
8CLPP_PINTH (P41609) ATP-dependent Clp protease proteolytic subun... 28 7.4
9KLF6_MOUSE (O08584) Krueppel-like factor 6 (Core promoter elemen... 28 9.7
10CFAD_MOUSE (P03953) Complement factor D precursor (EC 3.4.21.46)... 28 9.7

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 99.0 bits (245), Expect = 4e-21
 Identities = 46/70 (65%), Positives = 54/70 (77%)
 Frame = +2

Query: 221 PVVFNFGDSNSDTGGMATAKGWRIAPPEGRAFFHRPTGRFCDGRLIIDFLCESLNISYLS 400
           P +FNFGDSNSDTGG A A  + + PP G  FFHR TGR+ DGRLIIDF+ ES N+ YLS
Sbjct: 33  PAIFNFGDSNSDTGGKAAAF-YPLNPPYGETFFHRSTGRYSDGRLIIDFIAESFNLPYLS 91

Query: 401 PYLKALGSNY 430
           PYL +LGSN+
Sbjct: 92  PYLSSLGSNF 101



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 41/70 (58%), Positives = 54/70 (77%)
 Frame = +2

Query: 221 PVVFNFGDSNSDTGGMATAKGWRIAPPEGRAFFHRPTGRFCDGRLIIDFLCESLNISYLS 400
           P +FNFGDSNSDTGG++ A G +  PP G +FF  P GR+CDGRL+IDF+ ESL + YLS
Sbjct: 29  PAIFNFGDSNSDTGGLSAAFG-QAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGLPYLS 87

Query: 401 PYLKALGSNY 430
            +L ++GSN+
Sbjct: 88  AFLDSVGSNF 97



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
 Frame = +2

Query: 221 PVVFNFGDSNSDTGGMATAK-----GWRIAPPEGRAF-FHRPTGRFCDGRLIIDFLCESL 382
           P VF FGDS  DTG     +      +R   P G  F F   TGRF +G +  D+L + +
Sbjct: 203 PAVFFFGDSVFDTGNNNNLETKIKSNYR---PYGMDFKFRVATGRFSNGMVASDYLAKYM 259

Query: 383 NISYLSP 403
            +  + P
Sbjct: 260 GVKEIVP 266



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>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
 Frame = +2

Query: 221 PVVFNFGDSNSDTGG--------MATAKGWRIAPPEGRAFFHRPTGRFCDGRLIIDFLCE 376
           P VF FGDS  DTG             + + +  P G A     TGRF +GR+  D++ +
Sbjct: 124 PAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVA-----TGRFSNGRVASDYISK 178

Query: 377 SLNISYLSP 403
            L +  + P
Sbjct: 179 YLGVKEIVP 187



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>HLT_VIBPA (Q99289) Thermolabile hemolysin precursor (TL) (Lecithin-dependent|
           haemolysin) (LDH) (Atypical phospholipase)
           (Phospholipase A2) (Lysophospholipase)
          Length = 418

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +2

Query: 227 VFNFGDSNSDTGGMATAKGWRIAPPEGRAFFHRPTGRFCDGRLIIDFLCESLNI 388
           V   GDS SDTG +  A  WR   P   ++F    G F +G +  +++ ++ N+
Sbjct: 147 VVALGDSLSDTGNIFNASQWRF--PNPNSWF---LGHFSNGFVWTEYIAKAKNL 195



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>LTBP1_RAT (Q00918) Latent transforming growth factor beta-binding protein 1|
           precursor (LTBP-1) (Transforming growth factor
           beta-1-binding protein 1) (TGF-beta-1-BP-1)
           (Transforming growth factor beta-1-masking protein,
           large subunit)
          Length = 1712

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -1

Query: 348 PSQKRPVGRWKKARPSGGAMRHPLAVAMPPVSELESPKLNTTGRAPG-PQLN 196
           P+++ PV     +R  G  +  P  V  PP  E+ S     T   PG PQL+
Sbjct: 767 PAKEEPVEALTSSREHGPGVAEPEVVTAPPEKEIPSLDQEKTRLEPGQPQLS 818



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>KLF6_RAT (O35819) Krueppel-like factor 6 (Core promoter element-binding|
           protein) (Transcription factor Zf9)
          Length = 283

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = +2

Query: 197 FSCGPGARPVVFNFGDSNSDTGGMATAKGWRIAPPEGRAFFHR 325
           + CGPG  P   + G   S T G +  KG   A P+GR   HR
Sbjct: 162 WGCGPGDLP---SPGKVRSGTSGKSGDKGSGDASPDGRRRVHR 201



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>CLPP_PINTH (P41609) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 196

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 287 RIAPPEGRAFFHRPTGRFCDGRLIIDFLCESLNISYLSPYL 409
           RIA P  R   H+P   + DG    DF  ES +++ L  Y+
Sbjct: 115 RIALPHARIMIHQPASSYYDGS-AADFHNESKHVTMLRDYI 154



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>KLF6_MOUSE (O08584) Krueppel-like factor 6 (Core promoter element-binding|
           protein)
          Length = 283

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = +2

Query: 197 FSCGPGARPVVFNFGDSNSDTGGMATAKGWRIAPPEGRAFFHR 325
           + CGPG  P   + G   S T G +  KG   A P+GR   HR
Sbjct: 162 WGCGPGDLP---SPGKVRSGTSGKSGDKGNGDASPDGRRRVHR 201



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>CFAD_MOUSE (P03953) Complement factor D precursor (EC 3.4.21.46) (C3|
           convertase activator) (Properdin factor D) (Adipsin) (28
           kDa protein, adipocyte)
          Length = 259

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 13/75 (17%)
 Frame = +2

Query: 200 SCGPGARPVVFNFGDSNSDTGGMATAKGWRIAPPEGR----------AFFHRPT---GRF 340
           S GP  RP+   + D   + G +    GW +    GR          +  +R T     +
Sbjct: 126 SLGPHVRPLPLQYEDKEVEPGTLCDVAGWGVVTHAGRRPDVLHQLRVSIMNRTTCNLRTY 185

Query: 341 CDGRLIIDFLCESLN 385
            DG + I+ +C   N
Sbjct: 186 HDGVVTINMMCAESN 200


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,892,109
Number of Sequences: 219361
Number of extensions: 484332
Number of successful extensions: 1336
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1332
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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