ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast60c11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473679.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 294 Score = 192 bits (97), Expect = 6e-46 Identities = 147/164 (89%) Strand = Plus / Plus Query: 140 ttcttcttcgacgccnagccgctcggcgagcccggcatgccggcgcaggacgcgtgcgcg 199 ||||||||||||||| ||||| | ||||||| |||| || |||| |||||| |||||| Sbjct: 25 ttcttcttcgacgccgagccggtgggcgagcagggcaggcacgcgctggacgcctgcgcg 84 Query: 200 ctctgcaccaagccgctggcgcgcgacagcgacgtcttcatgtacaagggggacacgccc 259 ||||||||||||| ||| || | ||||||||| |||||||||||||||||||||||||| Sbjct: 85 ctctgcaccaagcagctcacgagggacagcgacatcttcatgtacaagggggacacgccc 144 Query: 260 ttctgcagcgaggagtgccgcgacgagcagatgcagctcgacgc 303 ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 145 ttctgcagcgaggagtgccgctacgagcagatgcagctcgacgc 188 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Plus Query: 362 cggcgcgggcagcaggagtccaggaaggtctccgtcgcgagcta 405 ||||||||||| | |||| |||||||||| ||||| |||||||| Sbjct: 250 cggcgcgggcaccgggagaccaggaaggtgtccgtggcgagcta 293
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16, complete sequence Length = 145739 Score = 192 bits (97), Expect = 6e-46 Identities = 147/164 (89%) Strand = Plus / Minus Query: 140 ttcttcttcgacgccnagccgctcggcgagcccggcatgccggcgcaggacgcgtgcgcg 199 ||||||||||||||| ||||| | ||||||| |||| || |||| |||||| |||||| Sbjct: 97358 ttcttcttcgacgccgagccggtgggcgagcagggcaggcacgcgctggacgcctgcgcg 97299 Query: 200 ctctgcaccaagccgctggcgcgcgacagcgacgtcttcatgtacaagggggacacgccc 259 ||||||||||||| ||| || | ||||||||| |||||||||||||||||||||||||| Sbjct: 97298 ctctgcaccaagcagctcacgagggacagcgacatcttcatgtacaagggggacacgccc 97239 Query: 260 ttctgcagcgaggagtgccgcgacgagcagatgcagctcgacgc 303 ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 97238 ttctgcagcgaggagtgccgctacgagcagatgcagctcgacgc 97195 Score = 180 bits (91), Expect = 2e-42 Identities = 162/186 (87%) Strand = Plus / Minus Query: 139 cttcttcttcgacgccnagccgctcggcgagcccggcatgccggcgcaggacgcgtgcgc 198 |||||||||||||||| ||||| |||||||| |||| || |||| |||||| ||||| Sbjct: 100914 cttcttcttcgacgccgagccggtcggcgagaccgggcggcacgcgctggacgcctgcgc 100855 Query: 199 gctctgcaccaagccgctggcgcgcgacagcgacgtcttcatgtacaagggggacacgcc 258 ||||||||||||||||||| ||||| |||||| |||||||||||| |||||||| || Sbjct: 100854 gctctgcaccaagccgctgcgccgcgatagcgacatcttcatgtacagaggggacacccc 100795 Query: 259 cttctgcagcgaggagtgccgcgacgagcagatgcagctcgacgccatctccgccaggca 318 |||||||||||||||||||||| ||||||||||||| ||||||||| || ||| ||||| Sbjct: 100794 cttctgcagcgaggagtgccgctacgagcagatgcacctcgacgccgcctgcgcgaggca 100735 Query: 319 ggccgc 324 |||||| Sbjct: 100734 ggccgc 100729 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Minus Query: 362 cggcgcgggcagcaggagtccaggaaggtctccgtcgcgagcta 405 ||||||||||| | |||| |||||||||| ||||| |||||||| Sbjct: 97133 cggcgcgggcaccgggagaccaggaaggtgtccgtggcgagcta 97090 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 251 gacacgcccttctgcagcgaggagtgc 277 |||| |||||||||||||||||||||| Sbjct: 86616 gacatgcccttctgcagcgaggagtgc 86590 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 251 gacacgcccttctgcagcgaggagtgc 277 |||||||| |||||||||||||||||| Sbjct: 82689 gacacgccgttctgcagcgaggagtgc 82663
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 192 bits (97), Expect = 6e-46 Identities = 147/164 (89%) Strand = Plus / Minus Query: 140 ttcttcttcgacgccnagccgctcggcgagcccggcatgccggcgcaggacgcgtgcgcg 199 ||||||||||||||| ||||| | ||||||| |||| || |||| |||||| |||||| Sbjct: 29594669 ttcttcttcgacgccgagccggtgggcgagcagggcaggcacgcgctggacgcctgcgcg 29594610 Query: 200 ctctgcaccaagccgctggcgcgcgacagcgacgtcttcatgtacaagggggacacgccc 259 ||||||||||||| ||| || | ||||||||| |||||||||||||||||||||||||| Sbjct: 29594609 ctctgcaccaagcagctcacgagggacagcgacatcttcatgtacaagggggacacgccc 29594550 Query: 260 ttctgcagcgaggagtgccgcgacgagcagatgcagctcgacgc 303 ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 29594549 ttctgcagcgaggagtgccgctacgagcagatgcagctcgacgc 29594506 Score = 180 bits (91), Expect = 2e-42 Identities = 162/186 (87%) Strand = Plus / Minus Query: 139 cttcttcttcgacgccnagccgctcggcgagcccggcatgccggcgcaggacgcgtgcgc 198 |||||||||||||||| ||||| |||||||| |||| || |||| |||||| ||||| Sbjct: 29598225 cttcttcttcgacgccgagccggtcggcgagaccgggcggcacgcgctggacgcctgcgc 29598166 Query: 199 gctctgcaccaagccgctggcgcgcgacagcgacgtcttcatgtacaagggggacacgcc 258 ||||||||||||||||||| ||||| |||||| |||||||||||| |||||||| || Sbjct: 29598165 gctctgcaccaagccgctgcgccgcgatagcgacatcttcatgtacagaggggacacccc 29598106 Query: 259 cttctgcagcgaggagtgccgcgacgagcagatgcagctcgacgccatctccgccaggca 318 |||||||||||||||||||||| ||||||||||||| ||||||||| || ||| ||||| Sbjct: 29598105 cttctgcagcgaggagtgccgctacgagcagatgcacctcgacgccgcctgcgcgaggca 29598046 Query: 319 ggccgc 324 |||||| Sbjct: 29598045 ggccgc 29598040 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Minus Query: 362 cggcgcgggcagcaggagtccaggaaggtctccgtcgcgagcta 405 ||||||||||| | |||| |||||||||| ||||| |||||||| Sbjct: 29594444 cggcgcgggcaccgggagaccaggaaggtgtccgtggcgagcta 29594401 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 251 gacacgcccttctgcagcgaggagtgc 277 |||| |||||||||||||||||||||| Sbjct: 29583927 gacatgcccttctgcagcgaggagtgc 29583901 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 251 gacacgcccttctgcagcgaggagtgc 277 |||||||| |||||||||||||||||| Sbjct: 29580000 gacacgccgttctgcagcgaggagtgc 29579974
>dbj|AK063206.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-D01, full insert sequence Length = 727 Score = 192 bits (97), Expect = 6e-46 Identities = 147/164 (89%) Strand = Plus / Plus Query: 140 ttcttcttcgacgccnagccgctcggcgagcccggcatgccggcgcaggacgcgtgcgcg 199 ||||||||||||||| ||||| | ||||||| |||| || |||| |||||| |||||| Sbjct: 113 ttcttcttcgacgccgagccggtgggcgagcagggcaggcacgcgctggacgcctgcgcg 172 Query: 200 ctctgcaccaagccgctggcgcgcgacagcgacgtcttcatgtacaagggggacacgccc 259 ||||||||||||| ||| || | ||||||||| |||||||||||||||||||||||||| Sbjct: 173 ctctgcaccaagcagctcacgagggacagcgacatcttcatgtacaagggggacacgccc 232 Query: 260 ttctgcagcgaggagtgccgcgacgagcagatgcagctcgacgc 303 ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 233 ttctgcagcgaggagtgccgctacgagcagatgcagctcgacgc 276 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Plus Query: 362 cggcgcgggcagcaggagtccaggaaggtctccgtcgcgagcta 405 ||||||||||| | |||| |||||||||| ||||| |||||||| Sbjct: 338 cggcgcgggcaccgggagaccaggaaggtgtccgtggcgagcta 381
>ref|XM_473680.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 315 Score = 180 bits (91), Expect = 2e-42 Identities = 162/186 (87%) Strand = Plus / Plus Query: 139 cttcttcttcgacgccnagccgctcggcgagcccggcatgccggcgcaggacgcgtgcgc 198 |||||||||||||||| ||||| |||||||| |||| || |||| |||||| ||||| Sbjct: 24 cttcttcttcgacgccgagccggtcggcgagaccgggcggcacgcgctggacgcctgcgc 83 Query: 199 gctctgcaccaagccgctggcgcgcgacagcgacgtcttcatgtacaagggggacacgcc 258 ||||||||||||||||||| ||||| |||||| |||||||||||| |||||||| || Sbjct: 84 gctctgcaccaagccgctgcgccgcgatagcgacatcttcatgtacagaggggacacccc 143 Query: 259 cttctgcagcgaggagtgccgcgacgagcagatgcagctcgacgccatctccgccaggca 318 |||||||||||||||||||||| ||||||||||||| ||||||||| || ||| ||||| Sbjct: 144 cttctgcagcgaggagtgccgctacgagcagatgcacctcgacgccgcctgcgcgaggca 203 Query: 319 ggccgc 324 |||||| Sbjct: 204 ggccgc 209
>dbj|AK120315.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055L24, full insert sequence Length = 636 Score = 180 bits (91), Expect = 2e-42 Identities = 162/186 (87%) Strand = Plus / Plus Query: 139 cttcttcttcgacgccnagccgctcggcgagcccggcatgccggcgcaggacgcgtgcgc 198 |||||||||||||||| ||||| |||||||| |||| || |||| |||||| ||||| Sbjct: 26 cttcttcttcgacgccgagccggtcggcgagaccgggcggcacgcgctggacgcctgcgc 85 Query: 199 gctctgcaccaagccgctggcgcgcgacagcgacgtcttcatgtacaagggggacacgcc 258 ||||||||||||||||||| ||||| |||||| |||||||||||| |||||||| || Sbjct: 86 gctctgcaccaagccgctgcgccgcgatagcgacatcttcatgtacagaggggacacccc 145 Query: 259 cttctgcagcgaggagtgccgcgacgagcagatgcagctcgacgccatctccgccaggca 318 |||||||||||||||||||||| ||||||||||||| ||||||||| || ||| ||||| Sbjct: 146 cttctgcagcgaggagtgccgctacgagcagatgcacctcgacgccgcctgcgcgaggca 205 Query: 319 ggccgc 324 |||||| Sbjct: 206 ggccgc 211
>gb|AY109649.1| Zea mays CL122_1 mRNA sequence Length = 3177 Score = 93.7 bits (47), Expect = 4e-16 Identities = 108/128 (84%), Gaps = 3/128 (2%) Strand = Plus / Plus Query: 139 cttcttcttcgacgccnagccgctcggcgagcccggcatgccggc---gcaggacgcgtg 195 |||||||||||||||| ||||| | |||||||| || ||| | | || |||||| || Sbjct: 2611 cttcttcttcgacgccgagccggactgcgagcccagcctgctgcccacgctggacgcctg 2670 Query: 196 cgcgctctgcaccaagccgctggcgcgcgacagcgacgtcttcatgtacaagggggacac 255 |||||||||| |||||||||||| |||||| ||||| |||||||||||| |||||||| Sbjct: 2671 cgcgctctgcgccaagccgctgggacgcgactgcgacatcttcatgtacagaggggacac 2730 Query: 256 gcccttct 263 |||||||| Sbjct: 2731 gcccttct 2738
>ref|XM_467200.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1034 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 228 gcgacgtcttcatgtacaagggggacacgcccttctgcagcgaggagtgc 277 ||||| |||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 418 gcgacatcttcatgtacagaggggacacgccgttctgcagcgaggagtgc 467
>ref|XM_467198.1| Oryza sativa (japonica cultivar-group), mRNA Length = 770 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 228 gcgacgtcttcatgtacaagggggacacgcccttctgcagcgaggagtgc 277 ||||| |||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 325 gcgacatcttcatgtacagaggggacacgccgttctgcagcgaggagtgc 374
>dbj|AK111294.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-A08, full insert sequence Length = 770 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 228 gcgacgtcttcatgtacaagggggacacgcccttctgcagcgaggagtgc 277 ||||| |||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 325 gcgacatcttcatgtacagaggggacacgccgttctgcagcgaggagtgc 374
>dbj|AK071055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077C02, full insert sequence Length = 1034 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 228 gcgacgtcttcatgtacaagggggacacgcccttctgcagcgaggagtgc 277 ||||| |||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 418 gcgacatcttcatgtacagaggggacacgccgttctgcagcgaggagtgc 467
>ref|XM_467202.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 228 gcgacgtcttcatgtacaagggggacacgcccttctgcagcgaggagtgccg 279 ||||| |||||||||||| ||| ||||||| |||||||||||||||||||| Sbjct: 214 gcgacatcttcatgtacagagggaacacgccattctgcagcgaggagtgccg 265
>ref|XM_473677.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 339 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 234 tcttcatgtacaagggggacacgcccttctgcagcgaggagtgc 277 |||||||||||| ||| |||||||| |||||||||||||||||| Sbjct: 101 tcttcatgtacaggggagacacgccgttctgcagcgaggagtgc 144
>dbj|AK070920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072B01, full insert sequence Length = 768 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 234 tcttcatgtacaagggggacacgcccttctgcagcgaggagtgc 277 |||||||||||| ||| |||||||| |||||||||||||||||| Sbjct: 38 tcttcatgtacaggggagacacgccgttctgcagcgaggagtgc 81
>dbj|AK064763.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-H07, full insert sequence Length = 872 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 234 tcttcatgtacaagggggacacgcccttctgcagcgaggagtgc 277 |||||||||||| ||| |||||||| |||||||||||||||||| Sbjct: 259 tcttcatgtacaggggagacacgccgttctgcagcgaggagtgc 302
>dbj|AK059947.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-H10, full insert sequence Length = 972 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 228 gcgacgtcttcatgtacaagggggacacgcccttctgcagcgaggagtgccg 279 ||||| |||||||||||| ||| ||||||| |||||||||||||||||||| Sbjct: 214 gcgacatcttcatgtacagagggaacacgccattctgcagcgaggagtgccg 265
>ref|XM_473678.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 384 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 225 acagcgacgtcttcatgtacaagggggacacgcccttctgcagcgaggagtgc 277 |||| ||| |||||||||||| || |||| |||||||||||||||||||||| Sbjct: 206 acagagacatcttcatgtacagaggtgacatgcccttctgcagcgaggagtgc 258
>dbj|AK060089.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H12, full insert sequence Length = 1044 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 225 acagcgacgtcttcatgtacaagggggacacgcccttctgcagcgaggagtgc 277 |||| ||| |||||||||||| || |||| |||||||||||||||||||||| Sbjct: 441 acagagacatcttcatgtacagaggtgacatgcccttctgcagcgaggagtgc 493
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 248 ggggacacgcccttctgcagcgaggagtgc 277 ||||||||||| |||||||||||||||||| Sbjct: 28155436 ggggacacgccgttctgcagcgaggagtgc 28155407 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 248 ggggacacgcccttctgcagcgaggagtgc 277 ||||||||||| |||||||||||||||||| Sbjct: 28151676 ggggacacgccgttctgcagcgaggagtgc 28151647 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Minus Query: 252 acacgcccttctgcagcgaggagtgccg 279 ||||||| |||||||||||||||||||| Sbjct: 28172516 acacgccattctgcagcgaggagtgccg 28172489 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 cggcggcctgctccttcttctt 144 |||||||||||||||||||||| Sbjct: 1611473 cggcggcctgctccttcttctt 1611494
>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1717_A09 Length = 203132 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 248 ggggacacgcccttctgcagcgaggagtgc 277 ||||||||||| |||||||||||||||||| Sbjct: 145083 ggggacacgccgttctgcagcgaggagtgc 145054 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 248 ggggacacgcccttctgcagcgaggagtgc 277 ||||||||||| |||||||||||||||||| Sbjct: 141323 ggggacacgccgttctgcagcgaggagtgc 141294 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Minus Query: 252 acacgcccttctgcagcgaggagtgccg 279 ||||||| |||||||||||||||||||| Sbjct: 162163 acacgccattctgcagcgaggagtgccg 162136
>ref|XM_467201.1| Oryza sativa (japonica cultivar-group), mRNA Length = 378 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Plus Query: 234 tcttcatgtacaagggggacacgcccttctgcagcgaggagtgc 277 |||||||||||| || ||||| || |||||||||||||||||| Sbjct: 197 tcttcatgtacagaggcgacaccccgttctgcagcgaggagtgc 240
>ref|XM_473675.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 453 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 238 catgtacaagggggacacgcccttctgcagcgaggagtgc 277 |||||||| |||||||| || |||||||||||||||||| Sbjct: 261 catgtacaggggggacattccgttctgcagcgaggagtgc 300
>dbj|AK061584.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-B04, full insert sequence Length = 1079 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 238 catgtacaagggggacacgcccttctgcagcgaggagtgc 277 |||||||| |||||||| || |||||||||||||||||| Sbjct: 460 catgtacaggggggacattccgttctgcagcgaggagtgc 499
>ref|XM_482330.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1113 Score = 46.1 bits (23), Expect = 0.088 Identities = 38/43 (88%) Strand = Plus / Plus Query: 235 cttcatgtacaagggggacacgcccttctgcagcgaggagtgc 277 ||||||||||||||| |||||| | ||||||||| ||||||| Sbjct: 631 cttcatgtacaagggcgacacggcgttctgcagcctggagtgc 673
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 177 tgccggcgcaggacgcgtgcgcg 199 ||||||||||||||||||||||| Sbjct: 336806 tgccggcgcaggacgcgtgcgcg 336828
>dbj|AK099936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119L03, full insert sequence Length = 1113 Score = 46.1 bits (23), Expect = 0.088 Identities = 38/43 (88%) Strand = Plus / Plus Query: 235 cttcatgtacaagggggacacgcccttctgcagcgaggagtgc 277 ||||||||||||||| |||||| | ||||||||| ||||||| Sbjct: 631 cttcatgtacaagggcgacacggcgttctgcagcctggagtgc 673
>gb|AC166316.2| Mus musculus chromosome 19, clone RP23-466L5, complete sequence Length = 185237 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 tctcctcttcctctctctcccc 45 |||||||||||||||||||||| Sbjct: 105163 tctcctcttcctctctctcccc 105184
>ref|XM_464005.1| Oryza sativa (japonica cultivar-group), mRNA Length = 682 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 cggcggcctgctccttcttctt 144 |||||||||||||||||||||| Sbjct: 95 cggcggcctgctccttcttctt 74
>ref|XM_516349.1| PREDICTED: Pan troglodytes similar to chemokine-like factor superfamily 8 (LOC460249), mRNA Length = 1161 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcgctcgctctcctcttcctct 37 |||||||||||||||||||||| Sbjct: 32 tcgctcgctctcctcttcctct 53
>gb|AY022900.1| Oryza sativa microsatellite MRG5225 containing (CGG)X10, genomic sequence Length = 230 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 cggcggcctgctccttcttctt 144 |||||||||||||||||||||| Sbjct: 87 cggcggcctgctccttcttctt 66
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 tctcctcttcctctctctcccc 45 |||||||||||||||||||||| Sbjct: 15126568 tctcctcttcctctctctcccc 15126547
>gb|AF474370.2| Homo sapiens chemokine-like factor super family member 8 (CKLFSF8) mRNA, complete cds Length = 1185 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcgctcgctctcctcttcctct 37 |||||||||||||||||||||| Sbjct: 40 tcgctcgctctcctcttcctct 61
>gb|AC097639.2| Homo sapiens chromosome 3 clone RP11-384L8, complete sequence Length = 177384 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcgctcgctctcctcttcctct 37 |||||||||||||||||||||| Sbjct: 112798 tcgctcgctctcctcttcctct 112819
>gb|AC103558.2| Homo sapiens chromosome 3 clone RP11-46B13, complete sequence Length = 174539 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcgctcgctctcctcttcctct 37 |||||||||||||||||||||| Sbjct: 25729 tcgctcgctctcctcttcctct 25750
>gb|AC091733.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048F08, from chromosome 3, complete sequence Length = 155790 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 tctcctcttcctctctctcccc 45 |||||||||||||||||||||| Sbjct: 28205 tctcctcttcctctctctcccc 28226
>ref|NM_178868.3| Homo sapiens CKLF-like MARVEL transmembrane domain containing 8 (CMTM8), mRNA Length = 1185 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcgctcgctctcctcttcctct 37 |||||||||||||||||||||| Sbjct: 40 tcgctcgctctcctcttcctct 61
>gb|AC159982.4| Mus musculus chromosome 19, clone RP24-383P9, complete sequence Length = 198886 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 tctcctcttcctctctctcccc 45 |||||||||||||||||||||| Sbjct: 150066 tctcctcttcctctctctcccc 150087
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctccc 44 |||||||||||||||||||||| Sbjct: 6312098 ctctcctcttcctctctctccc 6312119 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ttctgcagcgaggagtgccg 279 |||||||||||||||||||| Sbjct: 22027594 ttctgcagcgaggagtgccg 22027613
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 tctcctcttcctctctctcccc 45 |||||||||||||||||||||| Sbjct: 15121102 tctcctcttcctctctctcccc 15121081
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 cggcggcctgctccttcttctt 144 |||||||||||||||||||||| Sbjct: 48576 cggcggcctgctccttcttctt 48597
>dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1734_E04 Length = 101439 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctccc 44 |||||||||||||||||||||| Sbjct: 98235 ctctcctcttcctctctctccc 98256
>dbj|AP004135.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1132_G05 Length = 87572 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctccc 44 |||||||||||||||||||||| Sbjct: 48 ctctcctcttcctctctctccc 69
>dbj|AK062905.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-F09, full insert sequence Length = 679 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 cggcggcctgctccttcttctt 144 |||||||||||||||||||||| Sbjct: 95 cggcggcctgctccttcttctt 74
>gb|AC122119.11| Mus musculus chromosome 19, clone RP24-252F4, complete sequence Length = 183160 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 tctcctcttcctctctctcccc 45 |||||||||||||||||||||| Sbjct: 63257 tctcctcttcctctctctcccc 63236
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 cggcatgccggcgcaggacgc 192 ||||||||||||||||||||| Sbjct: 3220466 cggcatgccggcgcaggacgc 3220446
>ref|XM_550562.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1005 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 234 tcttcatgtacaagggggacacgcccttctgcagcga 270 ||||||||||||||||| || || | ||||||||||| Sbjct: 345 tcttcatgtacaaggggaacgcggcgttctgcagcga 381
>gb|AC139637.17| Mus musculus chromosome 15, clone RP24-253M12, complete sequence Length = 136076 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctcc 43 ||||||||||||||||||||| Sbjct: 79384 ctctcctcttcctctctctcc 79364
>gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0063F24, complete sequence Length = 152738 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 ctcctcttcctctctctcccc 45 ||||||||||||||||||||| Sbjct: 72737 ctcctcttcctctctctcccc 72757
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 279 gcgacgagcagatgcagctcgacgccatc 307 |||||| ||||||||||| |||||||||| Sbjct: 918533 gcgacgggcagatgcagcgcgacgccatc 918561
>gb|AC142474.4| Mus musculus BAC clone RP24-362N7 from chromosome 15, complete sequence Length = 172879 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctcc 43 ||||||||||||||||||||| Sbjct: 170743 ctctcctcttcctctctctcc 170763
>ref|XM_502831.1| Yarrowia lipolytica CLIB122, YALI0D14652g predicted mRNA Length = 3012 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 ggcctgctccttcttcttctt 147 ||||||||||||||||||||| Sbjct: 1338 ggcctgctccttcttcttctt 1318
>emb|AL136526.27| Human DNA sequence from clone RP11-151A6 on chromosome 13q32.21-33.3 Contains the 3' end of the PCCA gene for propionyl Coenzyme A carboxylase alpha polypeptide, the 3' end of a novel gene, a novel gene for a protein similar to ribosomal protein 26, the 3' end of a novel gene, a novel gene and a CpG island, complete sequence Length = 179804 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctcc 43 ||||||||||||||||||||| Sbjct: 72923 ctctcctcttcctctctctcc 72943
>gb|AC182755.1| Gasterosteus aculeatus clone VMRC28-49K03, complete sequence Length = 136793 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 cctcttcctctctctccccgcaccc 51 |||||||||||||| |||||||||| Sbjct: 16181 cctcttcctctctccccccgcaccc 16157
>gb|AC018843.4|AC018843 Homo sapiens chromosome 3 clone RP11-900O22 map 3p, complete sequence Length = 211012 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 ccgcccggaggcagcagcggt 341 ||||||||||||||||||||| Sbjct: 30919 ccgcccggaggcagcagcggt 30899
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ccatggcggcgtcggcggcct 131 ||||||||||||||||||||| Sbjct: 19433175 ccatggcggcgtcggcggcct 19433195
>gb|AC090956.1|AC090956 Homo sapiens chromosome 3 clone RP11-659G4 map 3p, complete sequence Length = 202844 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 ccgcccggaggcagcagcggt 341 ||||||||||||||||||||| Sbjct: 185485 ccgcccggaggcagcagcggt 185465
>gb|AC026218.5|AC026218 Homo sapiens chromosome 3 clone RP11-813N23 map 3p, complete sequence Length = 198597 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 ccgcccggaggcagcagcggt 341 ||||||||||||||||||||| Sbjct: 198526 ccgcccggaggcagcagcggt 198506
>gb|AC018505.4|AC018505 Homo sapiens chromosome 3 clone RP11-58I13 map 3p, complete sequence Length = 196044 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 ccgcccggaggcagcagcggt 341 ||||||||||||||||||||| Sbjct: 83937 ccgcccggaggcagcagcggt 83917
>gb|AC018831.4|AC018831 Homo sapiens chromosome 3 clone RP11-481B18 map 3p, complete sequence Length = 178548 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 ccgcccggaggcagcagcggt 341 ||||||||||||||||||||| Sbjct: 112320 ccgcccggaggcagcagcggt 112300
>gb|AC011599.8|AC011599 Homo sapiens 3 BAC RP11-606C6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 209876 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ccgcccggaggcagcagcggt 341 ||||||||||||||||||||| Sbjct: 125946 ccgcccggaggcagcagcggt 125966
>dbj|AK102200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087E11, full insert sequence Length = 1005 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 234 tcttcatgtacaagggggacacgcccttctgcagcga 270 ||||||||||||||||| || || | ||||||||||| Sbjct: 345 tcttcatgtacaaggggaacgcggcgttctgcagcga 381
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ccgccaggcaggccgcccgga 329 ||||||||||||||||||||| Sbjct: 5244078 ccgccaggcaggccgcccgga 5244058
>emb|AL161666.4|CNS01RHA Human chromosome 14 DNA sequence BAC R-89K22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167108 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctcc 43 ||||||||||||||||||||| Sbjct: 86719 ctctcctcttcctctctctcc 86699
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 ggcggcgtcggcggcctgctc 135 ||||||||||||||||||||| Sbjct: 3501306 ggcggcgtcggcggcctgctc 3501326
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 ctcctcttcctctctctcccc 45 ||||||||||||||||||||| Sbjct: 19850276 ctcctcttcctctctctcccc 19850296
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ccatggcggcgtcggcggcct 131 ||||||||||||||||||||| Sbjct: 19359402 ccatggcggcgtcggcggcct 19359422
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ccatggcggcgtcggcggcct 131 ||||||||||||||||||||| Sbjct: 110869 ccatggcggcgtcggcggcct 110889
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 ggcctgctccttcttcttctt 147 ||||||||||||||||||||| Sbjct: 1790883 ggcctgctccttcttcttctt 1790863
>gb|AC069271.5| Homo sapiens chromosome 3 clone RP11-715I4 map 3p, complete sequence Length = 229408 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 ccgcccggaggcagcagcggt 341 ||||||||||||||||||||| Sbjct: 164639 ccgcccggaggcagcagcggt 164619
>gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052K01, complete sequence Length = 144395 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 57406 ctctcctcttcctctctctc 57387
>gb|AC145600.6| Mus musculus BAC clone RP24-220P24 from chromosome y, complete sequence Length = 171542 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 142463 cctgctccttcttcttcttc 142482 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 142260 cctgctccttcttcttcttc 142279
>gb|AC166333.9| Mus musculus chromosome 1, clone RP23-395A13, complete sequence Length = 188044 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 59219 ctcctcttcctctctctccc 59238
>ref|XM_475785.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 501 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 460 ctctcctcttcctctctctc 441
>gb|AC137110.11| Mus musculus chromosome 7, clone RP23-399P8, complete sequence Length = 199827 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tcctcttcctctctctcccc 45 |||||||||||||||||||| Sbjct: 19087 tcctcttcctctctctcccc 19068
>gb|AC162284.11| Mus musculus chromosome 8, clone RP23-256C11, complete sequence Length = 162981 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 123526 ctctcctcttcctctctctc 123507 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 123507 ctctcctcttcctctctctc 123488
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 cgagcccggcatgccggcgcagga 189 |||||||||| ||||||||||||| Sbjct: 2002318 cgagcccggcctgccggcgcagga 2002341
>gb|AC102098.8| Mus musculus chromosome 7, clone RP23-49M22, complete sequence Length = 192099 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 19484 ctctcctcttcctctctctc 19503
>gb|AC121285.7| Mus musculus chromosome 3, clone RP23-437I18, complete sequence Length = 190736 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 9092 cctgctccttcttcttcttc 9111
>gb|AC129700.8| Rattus norvegicus 4 BAC CH230-10L17 (Children's Hospital Oakland Research Institute) complete sequence Length = 238527 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tcctcttcctctctctcccc 45 |||||||||||||||||||| Sbjct: 43393 tcctcttcctctctctcccc 43374
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 catggcggcgtcggcggcctgctc 135 |||| ||||||||||||||||||| Sbjct: 2941629 catgacggcgtcggcggcctgctc 2941606
>gb|AC183977.3| Mus musculus BAC clone RP24-70E20 from chromosome y, complete sequence Length = 210508 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 144280 ctctcctcttcctctctctc 144299
>ref|XM_324141.1| Neurospora crassa OR74A predicted protein (NCU04785.1) partial mRNA Length = 2637 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 247 cctgctccttcttcttcttc 266
>ref|XM_955318.1| Neurospora crassa OR74A hypothetical protein (NCU04785.1) partial mRNA Length = 2637 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 247 cctgctccttcttcttcttc 266
>gb|AC087218.2| Rattus norvegicus strain Brown Norway clone RP31-249D7, complete sequence Length = 144201 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tcctcttcctctctctcccc 45 |||||||||||||||||||| Sbjct: 87481 tcctcttcctctctctcccc 87462
>gb|AC145516.4| Mus musculus BAC clone RP24-157K17 from chromosome Y, complete sequence Length = 202847 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 201116 ctctcctcttcctctctctc 201097
>gb|AY596534.1| Saccharum officinarum clone SCJLLR1104A08, complete sequence Length = 1065 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ttctgcagcgaggagtgccg 279 |||||||||||||||||||| Sbjct: 394 ttctgcagcgaggagtgccg 413
>gb|AC158215.3| Mus musculus chromosome 7, clone RP24-180E12, complete sequence Length = 156342 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tcctcttcctctctctcccc 45 |||||||||||||||||||| Sbjct: 67398 tcctcttcctctctctcccc 67379
>gb|AC175390.2| Mus musculus BAC clone RP24-108F5 from chromosome y, complete sequence Length = 179677 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 114639 cctgctccttcttcttcttc 114620
>gb|AC026232.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-396K2, complete sequence Length = 74340 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 30643 ctcctcttcctctctctccc 30624
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 catggcggcgtcggcggcctgctc 135 |||| ||||||||||||||||||| Sbjct: 95451 catgacggcgtcggcggcctgctc 95428
>gb|AY319387.1| Oncorhynchus mykiss Na/K ATPase alpha subunit isoform 2 mRNA, complete cds Length = 3882 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 82 cctgctccttcttcttcttc 63
>gb|AY461827.1| Coprinus cordisporus SFSU DEH2073 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 597 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 gcaggacgcgtgcgcgctctgcac 207 |||||||||||| ||||||||||| Sbjct: 467 gcaggacgcgtgagcgctctgcac 444
>gb|AY461820.1| Coprinus cordisporus SFSU DEH1815 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 597 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 gcaggacgcgtgcgcgctctgcac 207 |||||||||||| ||||||||||| Sbjct: 478 gcaggacgcgtgagcgctctgcac 455
>gb|AY461819.1| Coprinus cordisporus SFSU DEH1813 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 555 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 gcaggacgcgtgcgcgctctgcac 207 |||||||||||| ||||||||||| Sbjct: 492 gcaggacgcgtgagcgctctgcac 469
>gb|AC126433.3| Mus musculus BAC clone RP24-468I23 from chromosome 17, complete sequence Length = 165036 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 84870 ctcctcttcctctctctccc 84889
>gb|AC129331.4| Mus musculus BAC clone RP23-75C8 from chromosome 8, complete sequence Length = 257765 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 35063 ctcctcttcctctctctccc 35082
>gb|AC126053.3| Mus musculus BAC clone RP23-280L21 from chromosome 16, complete sequence Length = 217131 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 147270 ctcctcttcctctctctccc 147251
>gb|AC125147.4| Mus musculus BAC clone RP24-350A15 from chromosome 7, complete sequence Length = 184180 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 78037 ctcctcttcctctctctccc 78018
>gb|AY143165.1| Mus musculus chromosome 8A region Length = 61618 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 59661 ctcctcttcctctctctccc 59680
>gb|AC125410.4| Mus musculus BAC clone RP23-146N3 from 3, complete sequence Length = 213701 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 112305 ctcctcttcctctctctccc 112324
>gb|AC127326.4| Mus musculus BAC clone RP23-251C4 from 8, complete sequence Length = 207802 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 163278 cctgctccttcttcttcttc 163259
>gb|AC136729.7| Mus musculus chromosome 3, clone RP23-175I24, complete sequence Length = 216602 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 13619 ctctcctcttcctctctctc 13600
>gb|AE004337.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 245 of 251 of the complete chromosome Length = 11594 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gcgacgagcagatgcagctc 298 |||||||||||||||||||| Sbjct: 1732 gcgacgagcagatgcagctc 1713
>ref|XM_735435.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000081.03.0) partial mRNA Length = 489 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 80 cctgctccttcttcttcttc 61
>emb|CR678775.2|CNS0FMOZ Tetraodon nigroviridis full-length cDNA Length = 553 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 241 ctctcctcttcctctctctc 222
>emb|CR676814.2|CNS0FL6Y Tetraodon nigroviridis full-length cDNA Length = 558 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 246 ctctcctcttcctctctctc 227
>gb|AC099690.8| Mus musculus chromosome 8, clone RP23-73E9, complete sequence Length = 225655 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 84441 ctcctcttcctctctctccc 84460
>gb|AC101996.9| Mus musculus chromosome 15, clone RP24-441N7, complete sequence Length = 164681 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 142392 ctctcctcttcctctctctc 142373
>gb|AC109166.10| Mus musculus chromosome 7, clone RP23-310P1, complete sequence Length = 168878 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ggcagcaggagtccaggaag 388 |||||||||||||||||||| Sbjct: 46590 ggcagcaggagtccaggaag 46571
>emb|AL732314.18| Human DNA sequence from clone RP13-465B17 on chromosome X Contains the 5' end of the gene for protein phosphatase 2A 48 kDa regulatory subunit (PR48), a fatty acid binding protein 5 (psoriasis-associated) (FABP5) pseudogene, a pseudogene similar to part of keratin 18 (KRT18) and nine CpG islands, complete sequence Length = 218723 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 133442 ctctcctcttcctctctctc 133461
>emb|AL591686.10| Human DNA sequence from clone RP11-561I11 on chromosome 1 Contains the 3' end of a novel gene (FLJ40773) and two novel genes, complete sequence Length = 175463 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 160618 ctctcctcttcctctctctc 160599
>emb|AL590682.9| Human DNA sequence from clone RP11-435F13 on chromosome 1 Contains a heterogeneous nuclear ribonucleoprotein A1 (HNRPA1) pseudogene, part of the RGS7 gene for regulator of G-protein signalling 7 and a ribosomal protein large P1 (RPLP1) pseudogene, complete sequence Length = 155156 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 ctcttcctctctctccccgcaccc 51 ||||| |||||||||||||||||| Sbjct: 134397 ctctttctctctctccccgcaccc 134420
>emb|AL359915.14| Human DNA sequence from clone RP11-418J17 on chromosome 1 Contains the 3' end of a novel gene, a ribosomal protein L6 (RPL6) pseudogene and the 5' end of a novel gene, complete sequence Length = 159158 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 139544 ctcctcttcctctctctccc 139563
>emb|AL138808.17| Human DNA sequence from clone RP5-974N19 on chromosome 20 Contains a novel gene and the 5' end of a novel gene, complete sequence Length = 89487 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 25866 cctgctccttcttcttcttc 25847
>emb|AL136302.16| Human DNA sequence from clone RP11-75F3 on chromosome 13 Contains a novel gene and a CpG island, complete sequence Length = 53157 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 38242 ctctcctcttcctctctctc 38223
>emb|AL050333.18|HSDJ93K22 Human DNA sequence from clone RP1-93K22 on chromosome 6q14.1-15.3 Contains the gene for a novel BTB/POZ domain containing protein (KIAA1417) and a CpG island, complete sequence Length = 113804 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 73582 ctcctcttcctctctctccc 73563
>ref|XM_785113.1| PREDICTED: Strongylocentrotus purpuratus similar to SWA-70 protein (LOC585280), partial mRNA Length = 1468 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tctcctcttcctctctctcc 43 |||||||||||||||||||| Sbjct: 1268 tctcctcttcctctctctcc 1249
>gb|AC130186.4| Atelerix albiventris clone LB4-244I20, complete sequence Length = 150635 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 123577 ctctcctcttcctctctctc 123596
>ref|NM_001031388.1| Gallus gallus similar to XNop56 protein (LOC426574), mRNA Length = 1983 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 1496 cctgctccttcttcttcttc 1477
>emb|BX897677.1| Neurospora crassa DNA linkage group VI BAC clone B15B10 Length = 77986 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 10221 cctgctccttcttcttcttc 10202
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 catggcggcgtcggcggcctgctc 135 |||| ||||||||||||||||||| Sbjct: 172449 catgacggcgtcggcggcctgctc 172426
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 cgctggcgcgcgacagcgacgtcttcat 240 |||||||||||| |||||||||| |||| Sbjct: 103324 cgctggcgcgcgccagcgacgtcgtcat 103351
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 cgctggcgcgcgacagcgacgtcttcat 240 |||||||||||| |||||||||| |||| Sbjct: 21768 cgctggcgcgcgccagcgacgtcgtcat 21795
>emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genome; segment 16/16 Length = 227214 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 caccaagccgctggcgcgcg 224 |||||||||||||||||||| Sbjct: 119278 caccaagccgctggcgcgcg 119259
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 115 ggcggcgtcggcggcctgctccttcttcttct 146 ||||||| | ||||||| |||||||||||||| Sbjct: 301540 ggcggcgaccgcggccttctccttcttcttct 301509
>gb|AC144560.3| Homo sapiens X BAC RP13-507I23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 68529 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ccgcccggaggcagcagcgg 340 |||||||||||||||||||| Sbjct: 7796 ccgcccggaggcagcagcgg 7815
>emb|AJ010302.1|RSP010302 Rhodobacter sphaeroides photosynthetic gene cluster Length = 40707 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 cgagcccggcatgccggcgcagga 189 |||||||||| ||||||||||||| Sbjct: 18831 cgagcccggcctgccggcgcagga 18808
>gb|AC153153.4| Mus musculus BAC clone RP23-79G18 from chromosome 13, complete sequence Length = 222383 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 157961 ctctcctcttcctctctctc 157980
>emb|AJ719454.1| Gallus gallus mRNA for hypothetical protein, clone 2i9 Length = 1983 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 1496 cctgctccttcttcttcttc 1477
>ref|NM_001013488.1| Danio rerio zgc:113409 (zgc:113409), mRNA Length = 1645 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 743 ctcctcttcctctctctccc 724
>gb|AC011505.6| Homo sapiens chromosome 19 clone CTD-2081K17, complete sequence Length = 167417 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 50105 ctcctcttcctctctctccc 50124 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 49767 ctctcctcttcctctctctc 49786
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 atggcggcgtcggcggcctg 132 |||||||||||||||||||| Sbjct: 4403456 atggcggcgtcggcggcctg 4403437
>gb|AC116361.2| Homo sapiens chromosome 5 clone RP11-731L3, complete sequence Length = 115981 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 aagctctgctcatcattcttgctc 83 ||||||||||||||| |||||||| Sbjct: 97308 aagctctgctcatcactcttgctc 97285
>dbj|AK021637.1| Homo sapiens cDNA FLJ11575 fis, clone HEMBA1003531 Length = 1588 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 939 ctcctcttcctctctctccc 958
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 acagcgacgtcttcatgtac 244 |||||||||||||||||||| Sbjct: 207224 acagcgacgtcttcatgtac 207205
>gb|AY027524.1| Frankia sp. CpI1 plasmid pFQ12, complete plasmid sequence Length = 22437 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cggcgtcggcggcctgctcc 136 |||||||||||||||||||| Sbjct: 13620 cggcgtcggcggcctgctcc 13639
>gb|AF195122.1| Rhodobacter sphaeroides photosynthetic gene cluster, partial sequence Length = 66280 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 cgagcccggcatgccggcgcagga 189 |||||||||| ||||||||||||| Sbjct: 43937 cgagcccggcctgccggcgcagga 43914
>gb|AC105389.3| Homo sapiens BAC clone RP11-227F19 from 4, complete sequence Length = 187067 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tcctcttcctctctctcccc 45 |||||||||||||||||||| Sbjct: 144974 tcctcttcctctctctcccc 144955
>gb|AF345824.1| Coprinus bisporus KACC49409 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 633 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 gcaggacgcgtgcgcgctctgcac 207 |||||||||||| ||||||||||| Sbjct: 466 gcaggacgcgtgagcgctctgcac 443
>gb|AC182036.2| Mus musculus BAC clone RP24-120L13 from chromosome y, complete sequence Length = 185554 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 59553 cctgctccttcttcttcttc 59534
>gb|AC132231.6| Mus musculus BAC clone RP24-484D4 from chromosome 1, complete sequence Length = 188905 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 56218 ctctcctcttcctctctctc 56199
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 884488 ctctcctcttcctctctctc 884507
>gb|AC019230.5|AC019230 Homo sapiens BAC clone RP11-571O22 from X, complete sequence Length = 179483 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 77394 ctcctcttcctctctctccc 77375
>emb|BX547995.5| Mouse DNA sequence from clone RP23-356H23 on chromosome X, complete sequence Length = 212590 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 165527 ctctcctcttcctctctctc 165546
>gb|AC116732.10| Mus musculus chromosome 3, clone RP23-347F4, complete sequence Length = 187006 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 9785 cctgctccttcttcttcttc 9766
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 7790940 ctctcctcttcctctctctc 7790959
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 26543931 ctctcctcttcctctctctc 26543912
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold Length = 1888123 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tcctcttcctctctctcccc 45 |||||||||||||||||||| Sbjct: 1752683 tcctcttcctctctctcccc 1752664
>gb|AC136285.2| Homo sapiens chromosome 16 clone RP11-899L11, complete sequence Length = 235286 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ctcttcctctctctccccgc 47 |||||||||||||||||||| Sbjct: 83656 ctcttcctctctctccccgc 83637
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 115 ggcggcgtcggcggcctgctccttcttcttct 146 ||||||| | ||||||| |||||||||||||| Sbjct: 6092831 ggcggcgaccgcggccttctccttcttcttct 6092862
>gb|AC126412.21| Mus musculus chromosome 3, clone RP24-267M22, complete sequence Length = 177266 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 14939 ctctcctcttcctctctctc 14958
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 150 acgccnagccgctcggcgagcccggca 176 ||||| ||| ||||||||||||||||| Sbjct: 346562 acgccgagctgctcggcgagcccggca 346588
>gb|AC092836.4| Homo sapiens BAC clone RP11-50B16 from 2, complete sequence Length = 165768 Score = 40.1 bits (20), Expect = 5.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 17 cgctcgctctcctct-tcctctctctcc 43 ||||||||||||||| |||||||||||| Sbjct: 114270 cgctcgctctcctctctcctctctctcc 114297
>gb|AC011450.4|AC011450 Homo sapiens chromosome 19 clone CTC-301O7, complete sequence Length = 106168 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 41999 ctcctcttcctctctctccc 42018
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 cagctcgacgccatctccgccagg 316 ||||||||||||||||| |||||| Sbjct: 727440 cagctcgacgccatctcggccagg 727463
>gb|BC090454.1| Danio rerio zgc:113409, mRNA (cDNA clone MGC:113409 IMAGE:7140858), complete cds Length = 1645 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 743 ctcctcttcctctctctccc 724
>dbj|AP004340.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0523A04 Length = 149049 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 39938 ctctcctcttcctctctctc 39957
>dbj|AP005194.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0565A07 Length = 152191 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 135029 ctctcctcttcctctctctc 135048
>gb|AC150625.3| Atelerix albiventris clone LB4-57B20, complete sequence Length = 81183 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 18002 ctctcctcttcctctctctc 18021
>dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_H01 Length = 128124 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ttctgcagcgaggagtgccg 279 |||||||||||||||||||| Sbjct: 113343 ttctgcagcgaggagtgccg 113362
>ref|XM_566179.1| Anopheles gambiae str. PEST ENSANGP00000028877 (ENSANGG00000022270), partial mRNA Length = 1581 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gctggcgcgcgacagcgacg 233 |||||||||||||||||||| Sbjct: 261 gctggcgcgcgacagcgacg 280
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 tgcagctcgacgccatctccgcca 314 |||||||||||||||||| ||||| Sbjct: 1762816 tgcagctcgacgccatctgcgcca 1762793
>gb|AC133598.4| Mus musculus BAC clone RP24-374G16 from 13, complete sequence Length = 170544 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 20675 ctctcctcttcctctctctc 20694
>emb|BX649398.4| Zebrafish DNA sequence from clone DKEY-202B22 in linkage group 4, complete sequence Length = 166156 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tctcctcttcctctctctcc 43 |||||||||||||||||||| Sbjct: 9655 tctcctcttcctctctctcc 9636
>emb|CT737399.2| Pan troglodytes chromosome X clone CH251-213G08 map Xq28, complete sequence Length = 144757 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ccgcccggaggcagcagcgg 340 |||||||||||||||||||| Sbjct: 27505 ccgcccggaggcagcagcgg 27524
>gb|AY107714.1| Zea mays PCO121192 mRNA sequence Length = 742 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ttctgcagcgaggagtgccg 279 |||||||||||||||||||| Sbjct: 337 ttctgcagcgaggagtgccg 356
>emb|Z81509.1|CEF21A3 Caenorhabditis elegans Cosmid F21A3, complete sequence Length = 32096 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 11262 cctgctccttcttcttcttc 11243
>gb|AC129307.5| Mus musculus BAC clone RP24-200K10 from chromosome 8, complete sequence Length = 200660 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 141174 ctctcctcttcctctctctc 141193
>gb|AC109510.7| Mus musculus chromosome 8, clone RP23-23D6, complete sequence Length = 185866 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ctcctcttcctctctctccc 44 |||||||||||||||||||| Sbjct: 142223 ctcctcttcctctctctccc 142204
>emb|AM049413.1| Serranus cabrilla microsatellite DNA, clone 15 Length = 200 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 60 ctctcctcttcctctctctc 79
>gb|U43810.1|MXU43810 Mycobacterium xenopi alkyl hydroperoxide reductase (ahpC) gene, partial cds, and oxidative stress regulator (oxyR) gene, partial cds. genes Length = 710 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 agccgctcggcgagcccggc 175 |||||||||||||||||||| Sbjct: 513 agccgctcggcgagcccggc 494
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 cggcgtcggcggcctgctcc 136 |||||||||||||||||||| Sbjct: 3006732 cggcgtcggcggcctgctcc 3006713 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 atggcggcgtcggcggcctg 132 |||||||||||||||||||| Sbjct: 1506803 atggcggcgtcggcggcctg 1506822
>emb|AL714024.31| Mouse DNA sequence from clone RP23-102H7 on chromosome 5, complete sequence Length = 213519 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 166873 cctgctccttcttcttcttc 166854
>gb|AC139294.4| Mus musculus BAC clone RP24-239E14 from 14, complete sequence Length = 183363 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 118592 ctctcctcttcctctctctc 118611
>gb|AC139182.4| Mus musculus BAC clone RP24-125O22 from 8, complete sequence Length = 159792 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 143064 cctgctccttcttcttcttc 143083
>gb|AC154382.1| Mus musculus BAC clone RP23-51D17 from 13, complete sequence Length = 180348 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tcctcttcctctctctcccc 45 |||||||||||||||||||| Sbjct: 21373 tcctcttcctctctctcccc 21354
>gb|AC154585.2| Mus musculus BAC clone RP23-359K10 from 12, complete sequence Length = 198520 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 32857 ctctcctcttcctctctctc 32876
>gb|AC112266.6| Mus musculus BAC clone RP23-422B6 from 13, complete sequence Length = 190943 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 102366 ctctcctcttcctctctctc 102385
>gb|AC145211.3| Mus musculus BAC clone RP23-419G4 from 8, complete sequence Length = 191166 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 8133 ctctcctcttcctctctctc 8152
>emb|AL833803.8| Mouse DNA sequence from clone RP23-244H7 on chromosome 2, complete sequence Length = 226251 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 149197 cctgctccttcttcttcttc 149178
>emb|AJ697969.1| Pseudomonas phage phiEL complete genome Length = 211215 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 caggaaggtctccgtcgcga 401 |||||||||||||||||||| Sbjct: 61565 caggaaggtctccgtcgcga 61546
>dbj|AP006384.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT10I22, TM0248, complete sequence Length = 81705 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctgctccttcttcttcttc 148 |||||||||||||||||||| Sbjct: 20957 cctgctccttcttcttcttc 20938
>gb|AC162033.11| Mus musculus chromosome 8, clone RP23-162M13, complete sequence Length = 217343 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 45635 ctctcctcttcctctctctc 45616 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 45616 ctctcctcttcctctctctc 45597
>emb|AL845477.8| Mouse DNA sequence from clone RP23-206J10 on chromosome 2, complete sequence Length = 103901 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tctcctcttcctctctctcc 43 |||||||||||||||||||| Sbjct: 102092 tctcctcttcctctctctcc 102073
>emb|AL626768.21| Mouse DNA sequence from clone RP23-347B4 on chromosome 4, complete sequence Length = 227165 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 cccagctcattcgctcgctctcct 29 |||||||| ||||||||||||||| Sbjct: 33076 cccagctcgttcgctcgctctcct 33053
>emb|AL773525.5| Mouse DNA sequence from clone RP23-169L4 on chromosome 2, complete sequence Length = 188772 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tctcctcttcctctctctcc 43 |||||||||||||||||||| Sbjct: 191 tctcctcttcctctctctcc 172
>emb|AL731703.16| Mouse DNA sequence from clone RP23-100O16 on chromosome 2, complete sequence Length = 187541 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 tctcctcttcctctctctcc 43 |||||||||||||||||||| Sbjct: 42488 tctcctcttcctctctctcc 42507
>gb|AC165249.2| Mus musculus BAC clone RP24-157P13 from chromosome 12, complete sequence Length = 193902 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctctcctcttcctctctctc 42 |||||||||||||||||||| Sbjct: 42005 ctctcctcttcctctctctc 41986
>dbj|AP003356.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1732A1 Length = 170533 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cttcctctctctccccgcac 49 |||||||||||||||||||| Sbjct: 46728 cttcctctctctccccgcac 46709 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,680,700 Number of Sequences: 3902068 Number of extensions: 4680700 Number of successful extensions: 160258 Number of sequences better than 10.0: 189 Number of HSP's better than 10.0 without gapping: 190 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 157022 Number of HSP's gapped (non-prelim): 3234 length of query: 406 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 384 effective length of database: 17,147,199,772 effective search space: 6584524712448 effective search space used: 6584524712448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
