ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast60c09 |
|---|---|
| Clone Library Name | barley_pub |
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 35.0 bits (79), Expect = 0.074 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = +1 Query: 46 KTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQ 183 K PP PS +PC + P +P+ TP +P+ PP P+ Sbjct: 98 KPPPAPSPSPCPSPPPKPQPKPVPPPACPPTPPKPQPKPAPPPEPK 143 Score = 33.1 bits (74), Expect = 0.28 Identities = 16/48 (33%), Positives = 19/48 (39%) Frame = +1 Query: 52 PPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQLPFP 195 PP P +P P S+P+ G P P PQ PP P P Sbjct: 60 PPTPDPSPKPVAPPGPSSKPVAPPGPSPCPSPPPKPQPKPPPAPSPSP 107
>RCOR3_MOUSE (Q6PGA0) REST corepressor 3| Length = 451 Score = 33.9 bits (76), Expect = 0.16 Identities = 20/59 (33%), Positives = 29/59 (49%) Frame = +1 Query: 7 PSYKSPLQALLKFKTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQ 183 P ++P +PP PSS P TVP+A +++P + L P P L + PP Q Sbjct: 336 PEAQTPQAPRTLGPSPPAPSSTPTPTVPIATLNQPPPLLRPTL-PAAPALHRQPPPLQQ 393
>ACRO_PIG (P08001) Acrosin precursor (EC 3.4.21.10) (53 kDa fucose-binding| protein) [Contains: Acrosin light chain; Acrosin heavy chain] Length = 415 Score = 33.1 bits (74), Expect = 0.28 Identities = 18/54 (33%), Positives = 26/54 (48%) Frame = +1 Query: 34 LLKFKTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQLPFP 195 +++ TPPRPS+ P V ++ P+R P P G+ PRP P P Sbjct: 294 MVQLGTPPRPST-PAPPVRPPSVQTPVRPPWYFQRPPGPSQQPGSRPRPPAPPP 346
>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3 (EC| 2.7.11.1) Length = 1309 Score = 33.1 bits (74), Expect = 0.28 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = +2 Query: 293 GPCGASTGARSMTTSATPTLLMCSPRLRPPGTSP-PLP 403 GP TG R T+S P+ L C P PP SP PLP Sbjct: 1169 GPPRPKTGRRKSTSSIPPSPLACPPISAPPPRSPSPLP 1206
>PTPA2_GIBZE (Q4INW6) Serine/threonine-protein phosphatase 2A activator 2 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-2) (PPIase PTPA-2) (Rotamase PTPA-2) (Phosphotyrosyl phosphatase activator 2) Length = 432 Score = 32.0 bits (71), Expect = 0.62 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Frame = +1 Query: 46 KTPPRPSSNPCTTVPLAAISRP-IRMAGIKLTPDE----PELPQGTPPRPQLPFP 195 K PP+P+S+P P AA S P ++ KL P + P P P P LP P Sbjct: 3 KAPPQPASSPGVAAPAAASSIPNLKDRLPKLEPRKRRSGPSNPTPIPETPALPTP 57
>RCOR3_HUMAN (Q9P2K3) REST corepressor 3| Length = 495 Score = 32.0 bits (71), Expect = 0.62 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +1 Query: 49 TPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQ 183 +PP PSS P T P+A +++P + L P P L + PP Q Sbjct: 394 SPPAPSSTPTPTAPIATLNQPPPLLRPTL-PAAPALHRQPPPLQQ 437
>TB182_HUMAN (Q9C0C2) 182 kDa tankyrase 1-binding protein| Length = 1729 Score = 31.6 bits (70), Expect = 0.81 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%) Frame = +1 Query: 7 PSYKSPLQA-LLKFKTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELP-QGTP--P 174 P SP + LL+ ++P ++PC V +A S + G + TP P LP +G P P Sbjct: 307 PDKSSPCHSQLLEAQSPEASQASPCPAVTPSAPSAALPDEGSRHTP-SPGLPAEGAPEAP 365 Query: 175 RPQLPFP 195 RP P P Sbjct: 366 RPSSPPP 372
>TCGAP_MOUSE (Q80YF9) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)| Length = 1305 Score = 31.6 bits (70), Expect = 0.81 Identities = 20/62 (32%), Positives = 26/62 (41%) Frame = +1 Query: 7 PSYKSPLQALLKFKTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQL 186 P PL L PP P NP + LA R ++A + ++ GTPP P Sbjct: 894 PLLPPPLPLLRPGGAPPPPPKNPARLMALALAERAQQVAEQQSQQEQ----GGTPPAPHS 949 Query: 187 PF 192 PF Sbjct: 950 PF 951
>EP400_HUMAN (Q96L91) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa| SWI2/SNF2-related protein) (Domino homolog) (hDomino) (CAG repeat protein 32) (Trinucleotide repeat-containing gene 12 protein) Length = 3160 Score = 31.2 bits (69), Expect = 1.1 Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 14/77 (18%) Frame = +1 Query: 7 PSYKSPLQ--ALLKFKTPPRPSSNPCTTVPLAAISRPIRMAG------------IKLTPD 144 PS P+Q A L P P P VP AA+S ++ A I + Sbjct: 574 PSTGPPVQNAASLHTPLPQLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQ 633 Query: 145 EPELPQGTPPRPQLPFP 195 +P +P PP QLP P Sbjct: 634 QPNVPIPAPPSSQLPIP 650
>ERBB2_MOUSE (P70424) Receptor tyrosine-protein kinase erbB-2 precursor (EC| 2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene) Length = 1256 Score = 31.2 bits (69), Expect = 1.1 Identities = 18/56 (32%), Positives = 24/56 (42%) Frame = +1 Query: 7 PSYKSPLQALLKFKTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPP 174 P SPLQ + T P P PLA +P + ++ P P P+G PP Sbjct: 1104 PHDLSPLQRYSEDPTLPLPPETDGYVAPLACSPQPEYVNQPEVRPQSPLTPEGPPP 1159
>YNM4_YEAST (P53919) Hypothetical 54.9 kDa protein in SPC98-TOM70 intergenic| region Length = 492 Score = 31.2 bits (69), Expect = 1.1 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 12/75 (16%) Frame = +1 Query: 7 PSYKSPLQALLKFKTPPRP--SSNPC---TTVPLAAI-------SRPIRMAGIKLTPDEP 150 P Y SP F+ PP P + P TVP ++ S P + + + +T +P Sbjct: 372 PPY-SPFPQPTNFQYPPPPFGQATPAQFSNTVPYGSLPPAYNNMSPPTQQSFMPMTQSQP 430 Query: 151 ELPQGTPPRPQLPFP 195 LP G PP Q+ P Sbjct: 431 PLPYGVPPMNQMQNP 445
>POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1748 Score = 30.8 bits (68), Expect = 1.4 Identities = 21/63 (33%), Positives = 27/63 (42%) Frame = +1 Query: 7 PSYKSPLQALLKFKTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQL 186 PS + L + PPRP + T PLA+ S+ A T P +PQ P L Sbjct: 572 PSIAAAPHPLPPAQKPPRPPTTVPTPKPLASPSQ--TQAAQPATQSPPSIPQTAPVTSLL 629 Query: 187 PFP 195 P P Sbjct: 630 PAP 632
>TR150_HUMAN (Q9Y2W1) Thyroid hormone receptor-associated protein 3 (Thyroid| hormone receptor-associated protein complex 150 kDa component) (Trap150) Length = 955 Score = 30.8 bits (68), Expect = 1.4 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = +1 Query: 7 PSYKSPLQALLKFKTPPRPSSNPCTTVPLAAISR 108 P+ KSPLQ+++ + PRPS P + PL++ S+ Sbjct: 249 PALKSPLQSVVVRRRSPRPSPVPKPSPPLSSTSQ 282
>FMN2_MOUSE (Q9JL04) Formin-2| Length = 1567 Score = 30.4 bits (67), Expect = 1.8 Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 10/71 (14%) Frame = +1 Query: 7 PSYKSPLQALLKFKT---------PPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELP 159 P+ SP L+F PP+P P VP + P+ GI P P LP Sbjct: 872 PALPSPTAPALQFSNLQGPEMLPAPPQPPPLPGLGVPPPPPAPPLPGMGI---PPPPPLP 928 Query: 160 -QGTPPRPQLP 189 G PP P LP Sbjct: 929 GMGIPPPPPLP 939 Score = 28.5 bits (62), Expect = 6.9 Identities = 20/61 (32%), Positives = 25/61 (40%) Frame = +1 Query: 7 PSYKSPLQALLKFKTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQL 186 P PL L PP P + P +P I P + G+ + P P G PP P L Sbjct: 896 PPQPPPLPGL---GVPPPPPAPP---LPGMGIPPPPPLPGMGIPPPPPLPGMGIPPPPPL 949 Query: 187 P 189 P Sbjct: 950 P 950
>AMD_HUMAN (P19021) Peptidyl-glycine alpha-amidating monooxygenase precursor| (EC 1.14.17.3) (PAM) Length = 973 Score = 30.4 bits (67), Expect = 1.8 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 7/55 (12%) Frame = +1 Query: 10 SYKSPLQALLKFKTPPRPSSNPC--TTVPLAAI-----SRPIRMAGIKLTPDEPE 153 +++SPL +FK RP SN C TT P+ I + IRM G+ TP + + Sbjct: 20 AFRSPLSVFKRFKETTRPFSNECLGTTRPVVPIDSSDFALDIRMPGV--TPKQSD 72
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 30.4 bits (67), Expect = 1.8 Identities = 16/50 (32%), Positives = 20/50 (40%) Frame = +1 Query: 46 KTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQLPFP 195 K PP P+ +PC P +P P +P PQ PP P P Sbjct: 15 KPPPAPTPSPCPPQPPKPQPKPPPAPTPSPCPPQPPKPQPKPPPAPGPSP 64
>DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) Length = 1248 Score = 30.0 bits (66), Expect = 2.4 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 17/64 (26%) Frame = +1 Query: 49 TPPRPSSNPCTTVPL---AAISRPIRMAGIKLTPDEPELPQGT--------------PPR 177 TPP P P PL AIS P ++G P P LP+G PP Sbjct: 598 TPPPPPPPPPPPPPLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPP 657 Query: 178 PQLP 189 P LP Sbjct: 658 PPLP 661
>DAAM1_HUMAN (Q9Y4D1) Disheveled-associated activator of morphogenesis 1| Length = 1078 Score = 29.6 bits (65), Expect = 3.1 Identities = 19/47 (40%), Positives = 22/47 (46%) Frame = +1 Query: 55 PRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQLPFP 195 P PSS P + +P P + G L P P LP G PP P P P Sbjct: 539 PFPSSVPGSLLPPPP---PPPLPGGMLPPPPPPLPPGGPPPPPGPPP 582
>IF2_ANASP (Q8YQJ1) Translation initiation factor IF-2| Length = 1039 Score = 29.6 bits (65), Expect = 3.1 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +1 Query: 52 PPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTP 171 PPRP + P + + A SRP+ + TP +P P+ P Sbjct: 129 PPRPFATPVSPMKPTAPSRPV-PRNLSETPQKPAAPEAEP 167
>CN032_PONPY (Q5R623) Protein C14orf32 homolog| Length = 245 Score = 29.6 bits (65), Expect = 3.1 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Frame = +1 Query: 43 FKTPPRPSSNPCTTVPLAAISR-PIRMAGIKLTPDEPELPQGTPPRPQLPFP 195 + P PSS P P A S P A + P P P G PP P PFP Sbjct: 40 WNNPSAPSSVPSGLPPSATPSTVPFGPAPTGMYPSVP--PTGPPPGPPAPFP 89
>CN032_HUMAN (Q8NDC0) Protein C14orf32| Length = 245 Score = 29.6 bits (65), Expect = 3.1 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Frame = +1 Query: 43 FKTPPRPSSNPCTTVPLAAISR-PIRMAGIKLTPDEPELPQGTPPRPQLPFP 195 + P PSS P P A S P A + P P P G PP P PFP Sbjct: 40 WNNPSAPSSVPSGLPPSATPSTVPFGPAPTGMYPSVP--PTGPPPGPPAPFP 89
>TR150_XENLA (Q5BJ39) Thyroid hormone receptor-associated protein 3 (Thyroid| hormone receptor-associated protein complex 150 kDa component) (Trap150) Length = 951 Score = 29.6 bits (65), Expect = 3.1 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +1 Query: 7 PSYKSPLQALLKFKTPPRPSSNPCTTVPLAAISR 108 P+ KSPLQ+++ + PRPS P + PL+ S+ Sbjct: 249 PALKSPLQSVVVRRRSPRPSPVPKPSPPLSNASQ 282
>TR150_RAT (Q5M7V8) Thyroid hormone receptor-associated protein 3 (Thyroid| hormone receptor-associated protein complex 150 kDa component) (Trap150) Length = 951 Score = 29.6 bits (65), Expect = 3.1 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +1 Query: 7 PSYKSPLQALLKFKTPPRPSSNPCTTVPLAAISR 108 P+ KSPLQ+++ + PRPS P + PL+ S+ Sbjct: 249 PALKSPLQSVVVRRRSPRPSPVPKPSPPLSNASQ 282
>TR150_MOUSE (Q569Z6) Thyroid hormone receptor-associated protein 3 (Thyroid| hormone receptor-associated protein complex 150 kDa component) (Trap150) Length = 951 Score = 29.6 bits (65), Expect = 3.1 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +1 Query: 7 PSYKSPLQALLKFKTPPRPSSNPCTTVPLAAISR 108 P+ KSPLQ+++ + PRPS P + PL+ S+ Sbjct: 249 PALKSPLQSVVVRRRSPRPSPVPKPSPPLSNASQ 282
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor| (Hydroxyproline-rich glycoprotein 1) Length = 555 Score = 29.6 bits (65), Expect = 3.1 Identities = 19/63 (30%), Positives = 23/63 (36%) Frame = +1 Query: 7 PSYKSPLQALLKFKTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQL 186 P+ SP + PP P S + P A P A P P P PP P+ Sbjct: 202 PAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPSPAPPSPKP 261 Query: 187 PFP 195 P P Sbjct: 262 PAP 264
>ZCHC8_XENLA (Q6DD45) Zinc finger CCHC domain-containing protein 8| Length = 743 Score = 29.3 bits (64), Expect = 4.0 Identities = 20/56 (35%), Positives = 23/56 (41%) Frame = +1 Query: 7 PSYKSPLQALLKFKTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPP 174 PSY +P PP P P +T P P TP P LP+GTPP Sbjct: 462 PSYGTP---------PPLPRGTPPSTPPNFIPPPPP-------TPTPPPLPKGTPP 501
>RIBF_SYNY3 (P73651) Riboflavin biosynthesis protein ribF [Includes: Riboflavin| kinase (EC 2.7.1.26) (Flavokinase); FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase)] Length = 284 Score = 29.3 bits (64), Expect = 4.0 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = -2 Query: 113 IGREIAARGTVVQGLELGR 57 +GR A RGTVVQG +LGR Sbjct: 153 LGRPYALRGTVVQGQQLGR 171
>SN1L2_PONPY (Q5REX1) Serine/threonine-protein kinase SNF1-like kinase 2 (EC| 2.7.11.1) Length = 925 Score = 29.3 bits (64), Expect = 4.0 Identities = 19/59 (32%), Positives = 25/59 (42%) Frame = +1 Query: 19 SPLQALLKFKTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQLPFP 195 +PL L+ + PP P P P AA A ++ + ELP PP P P P Sbjct: 811 APLPTQLQQQQPPPPPPPPPPRQPGAA------PAPLQFSYQTCELPSAAPPAPDYPTP 863
>SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) (Transcription| factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP) Length = 639 Score = 29.3 bits (64), Expect = 4.0 Identities = 16/42 (38%), Positives = 19/42 (45%) Frame = +2 Query: 278 WQRTRGPCGASTGARSMTTSATPTLLMCSPRLRPPGTSPPLP 403 WQ+ + AS GA M + T L PPG PPLP Sbjct: 544 WQQQQAAAAASPGAPQMQGNPTMVPL-------PPGVQPPLP 578
>SF3A2_HUMAN (Q15428) Splicing factor 3A subunit 2 (Spliceosome-associated| protein 62) (SAP 62) (SF3a66) Length = 464 Score = 28.9 bits (63), Expect = 5.3 Identities = 20/55 (36%), Positives = 22/55 (40%) Frame = +1 Query: 25 LQALLKFKTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQLP 189 LQ K + PP P S P G+K P P L G PPRP LP Sbjct: 208 LQFHFKMEKPPAPPSLPAGP------------PGVKRPP--PPLMNGLPPRPPLP 248
>AMD_MOUSE (P97467) Peptidyl-glycine alpha-amidating monooxygenase precursor| (EC 1.14.17.3) (PAM) Length = 979 Score = 28.9 bits (63), Expect = 5.3 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 7/55 (12%) Frame = +1 Query: 10 SYKSPLQALLKFKTPPRPSSNPC--TTVPLAAI-----SRPIRMAGIKLTPDEPE 153 +++SPL +FK R SN C TT P+ I + IRM G+ TP E + Sbjct: 24 AFRSPLSVFKRFKETTRSFSNECLGTTRPITPIDSSDFTLDIRMPGV--TPKESD 76
>YLJ1_CAEEL (P34366) Hypothetical protein C50C3.1| Length = 469 Score = 28.9 bits (63), Expect = 5.3 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +1 Query: 52 PPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQ 183 PP PSS P T PL A+ ++ GI + P PQ Sbjct: 314 PPYPSSFPAPTTPLLALMSQLKQRGIISGEQNNQPLDNVNPMPQ 357
>TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)| Length = 1287 Score = 28.9 bits (63), Expect = 5.3 Identities = 19/57 (33%), Positives = 23/57 (40%) Frame = +1 Query: 22 PLQALLKFKTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQLPF 192 PL L PP P NP + LA R ++A + GTPP Q PF Sbjct: 879 PLSLLRPGGAPPPPPKNPARLMALALAERAQQVA----EQQSQQECGGTPPASQSPF 931
>MAST1_MOUSE (Q9R1L5) Microtubule-associated serine/threonine-protein kinase 1| (EC 2.7.11.1) (Syntrophin-associated serine/threonine-protein kinase) Length = 1566 Score = 28.9 bits (63), Expect = 5.3 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +1 Query: 40 KFKTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPP 174 + + PPRPSS+P +++ ++ G TP EPE + + P Sbjct: 819 RLRRPPRPSSDPPSSLDTRVPKEAVQGEGTS-TPGEPEATERSHP 862
>UBE4B_HUMAN (O95155) Ubiquitin conjugation factor E4 B (Ubiquitin-fusion| degradation protein 2) (Homozygously deleted in neuroblastoma 1) Length = 1302 Score = 28.9 bits (63), Expect = 5.3 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 8/41 (19%) Frame = +2 Query: 305 ASTGARSMTTSATPTLLMCSP--------RLRPPGTSPPLP 403 AS+G +++S +P L SP R RP T PPLP Sbjct: 340 ASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLP 380
>SF3A2_MOUSE (Q62203) Splicing factor 3A subunit 2 (Spliceosome-associated| protein 62) (SAP 62) (SF3a66) Length = 475 Score = 28.9 bits (63), Expect = 5.3 Identities = 20/55 (36%), Positives = 22/55 (40%) Frame = +1 Query: 25 LQALLKFKTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQLP 189 LQ K + PP P S P G+K P P L G PPRP LP Sbjct: 198 LQFHFKMEKPPAPPSLPAGP------------PGVKRPP--PPLMNGLPPRPPLP 238
>TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding protein 7)| (Fragment) Length = 290 Score = 28.5 bits (62), Expect = 6.9 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Frame = +1 Query: 49 TPPRPSSNPCTTVPL----AAISRPIRMAGIKLTPDEPELPQGTPPRPQLP 189 +PPR + P T VPL +I R LT + P P PP P P Sbjct: 216 SPPRVPTPPSTPVPLPEKRRSILREPTFRWTSLTRELPPPPPAPPPAPSPP 266
>EBNA2_EBV (P12978) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)| (EBNA-2) Length = 487 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = +2 Query: 332 TSATPTLLMCSPRLRPPGTSPPLPLITVL 418 T P L PR P T PP PL+TVL Sbjct: 204 TPLPPATLTVPPRPTRPTTLPPTPLLTVL 232
>SCAM3_BOVIN (Q58DR5) Secretory carrier-associated membrane protein 3 (Secretory| carrier membrane protein 3) Length = 347 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +1 Query: 55 PRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPE 153 P PS P VP+A S P + KL+P EP+ Sbjct: 49 PPPSYEPPAPVPIAPPSAPPLQSSRKLSPTEPK 81
>EBNA2_EBVG (Q3KSV2) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)| (EBNA-2) (EBNA2) Length = 451 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = +2 Query: 332 TSATPTLLMCSPRLRPPGTSPPLPLITVL 418 T P L PR P T PP PL+TVL Sbjct: 170 TPLPPATLTVPPRPTRPTTLPPTPLLTVL 198
>RIR1_HHV23 (P09853) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) (136 kDa subunit) Length = 1144 Score = 28.5 bits (62), Expect = 6.9 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +1 Query: 64 SSNPCTTVPLAAISRPIRMAGIKLTPDEPELPQGTPPRPQLPFP 195 +S P T + + + G TP EP+ PQ PP P PFP Sbjct: 117 TSGPSATTSVGTQTSGEFLHGNPRTP-EPQGPQAVPPPPPPPFP 159
>KCNH2_CANFA (Q9TSZ3) Potassium voltage-gated channel subfamily H member 2| (Voltage-gated potassium channel subunit Kv11.1) (Ether-a-go-go-related gene potassium channel 1) (ERG1) (c-erg) (DERG) (Ether-a-go-go-related protein 1) (Eag-related protein 1) Length = 1158 Score = 28.5 bits (62), Expect = 6.9 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +1 Query: 70 NPCTTVPLAAISRPIR-MAGIKLTPDEPELPQGTPPR 177 +P T+ L ++S+ + MA +L P PELPQ PPR Sbjct: 1097 SPIPTLTLDSLSQVSQFMAFEELPPGAPELPQDGPPR 1133
>FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1| Length = 959 Score = 28.5 bits (62), Expect = 6.9 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 6/69 (8%) Frame = +1 Query: 7 PSYKSPLQALLKFKTPPRPSSNPCTTVPLA-----AISRPIRMAGIKLTPD-EPELPQGT 168 PS +S L+A + RP + P + A S P+ A ++P EP+ P Sbjct: 229 PSSRSALRATIVSSPFHRPQPSDGDQPPSSPEADDAPSAPVEDAAPAISPAAEPDAPASA 288 Query: 169 PPRPQLPFP 195 PP P P P Sbjct: 289 PPEPAEPSP 297
>CP007_HUMAN (Q9Y2B5) Protein C16orf7 (Protein ATP-BL)| Length = 438 Score = 28.1 bits (61), Expect = 9.0 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Frame = +1 Query: 10 SYKSPLQALLKFKTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPEL---PQGTPPRP 180 S S L + P P P T P + RP + L+P EP PQ +PP P Sbjct: 325 SVYSALYPAVSRAAAPAPGCCPPTPNPGSRRLRPSQSLHCMLSPPEPSAAPRPQDSPPTP 384 Query: 181 QL 186 L Sbjct: 385 PL 386
>IF2_MYCTU (P65131) Translation initiation factor IF-2| Length = 900 Score = 28.1 bits (61), Expect = 9.0 Identities = 11/20 (55%), Positives = 11/20 (55%) Frame = +1 Query: 136 TPDEPELPQGTPPRPQLPFP 195 TP PE P PP PQ P P Sbjct: 112 TPAAPEPPTAVPPSPQAPHP 131
>IF2_MYCBO (P65132) Translation initiation factor IF-2| Length = 900 Score = 28.1 bits (61), Expect = 9.0 Identities = 11/20 (55%), Positives = 11/20 (55%) Frame = +1 Query: 136 TPDEPELPQGTPPRPQLPFP 195 TP PE P PP PQ P P Sbjct: 112 TPAAPEPPTAVPPSPQAPHP 131
>GUNA_STRLI (P27035) Endoglucanase celA precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) Length = 459 Score = 28.1 bits (61), Expect = 9.0 Identities = 17/48 (35%), Positives = 20/48 (41%) Frame = +2 Query: 254 WLRTTSGQWQRTRGPCGASTGARSMTTSATPTLLMCSPRLRPPGTSPP 397 W RT + G G+ TGA TS T CS + P T PP Sbjct: 96 WNRTLATGASADLGFVGSFTGANPAPTSFTLNGATCSGSVTDPPTDPP 143
>HOR7_HORVU (P06472) C-hordein (PCP387) (Fragment)| Length = 105 Score = 28.1 bits (61), Expect = 9.0 Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 3/66 (4%) Frame = +1 Query: 7 PSYKSPLQALLKFKTP-PRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPE--LPQGTPPR 177 P P+Q F P P P P PL +P ++ P +P PQ P + Sbjct: 2 PQQSYPVQPQQPFPQPQPVPQQRPQQASPLQP-QQPFPQGSEQIIPQQPFPLQPQPFPQQ 60 Query: 178 PQLPFP 195 PQ P P Sbjct: 61 PQQPLP 66
>DYNA_RAT (P28023) Dynactin-1 (150 kDa dynein-associated polypeptide)| (DP-150) (DAP-150) (p150-glued) Length = 1280 Score = 28.1 bits (61), Expect = 9.0 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 7/44 (15%) Frame = +2 Query: 293 GPCG-ASTGARSMTTSATPTL------LMCSPRLRPPGTSPPLP 403 GP G AS G S + +TP ++ +P L PG +PPLP Sbjct: 168 GPSGSASAGELSSSEPSTPAQTPLAAPIIPTPALTSPGAAPPLP 211
>DYNA_MOUSE (O08788) Dynactin-1 (150 kDa dynein-associated polypeptide)| (DP-150) (DAP-150) (p150-glued) Length = 1281 Score = 28.1 bits (61), Expect = 9.0 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 7/44 (15%) Frame = +2 Query: 293 GPCG-ASTGARSMTTSATPTL------LMCSPRLRPPGTSPPLP 403 GP G AS G S + +TP ++ +P L PG +PPLP Sbjct: 168 GPSGSASAGELSSSEPSTPAQTPLAAPIIPTPALTSPGAAPPLP 211
>RECF_PARUW (Q6MAG9) DNA replication and repair protein recF| Length = 359 Score = 28.1 bits (61), Expect = 9.0 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = +1 Query: 13 YKSPLQALLKFKTPPRPSSNPCTTVPLAAISRPIRMA-GIKLTPDEPELPQGTP 171 YK ++ LKF + PLA +S + + G+ +TPD+ +L +G+P Sbjct: 75 YKHGIEQTLKFGFHTTDRKIIYNSTPLATLSNLLGLIPGVIITPDDVQLVKGSP 128
>MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1| Length = 2042 Score = 28.1 bits (61), Expect = 9.0 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Frame = +1 Query: 7 PSYKSPLQALLKFKTPPRPSSNPCTTVPLAAISRPIRMAGIKLTPDEPE---LPQGTPPR 177 P + +P Q+ L PP S P T P + S P +L P PE PQG+PP Sbjct: 1052 PKHPAP-QSRLSPPPPPLEQSTPRTRPPQSQES-PEPPFSSELDPPNPEPKVRPQGSPPL 1109 Query: 178 PQLP 189 +P Sbjct: 1110 SPIP 1113 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.135 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,598,423 Number of Sequences: 219361 Number of extensions: 732142 Number of successful extensions: 3752 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 3280 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3695 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
