ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast60b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome... 101 2e-18
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 101 2e-18
3emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0... 101 2e-18
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
6dbj|AK103649.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
7dbj|AK101466.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
8dbj|AK064308.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
9gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 101 2e-18
10emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb... 101 2e-18
11ref|XM_479116.1| Oryza sativa (japonica cultivar-group), mRNA 84 4e-13
12gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb002... 84 4e-13
13dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
14dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
15gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence 78 2e-11
16gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 50 0.005
17gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 48 0.020
18dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 48 0.020
19gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence 46 0.078
20emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 46 0.078
21emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 46 0.078
22emb|X70689.1|SLTRNASA S.lividans tRNA-Ser and tRNA-Arg genes 46 0.078
23gb|AE009740.1| Brucella melitensis 16M chromosome II, section 10... 46 0.078
24gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 46 0.078
25ref|XM_313322.2| Anopheles gambiae str. PEST ENSANGP00000010432 ... 46 0.078
26gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 46 0.078
27gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 46 0.078
28emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II... 46 0.078
29dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 46 0.078
30gb|AY423269.1| Streptomyces diastaticus 108 cytochrome P450 mono... 44 0.31
31gb|AE005755.1| Caulobacter crescentus CB15 section 81 of 359 of ... 44 0.31
32dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.31
33gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.31
34gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 1.2
35gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.2
36gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.2
37gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.2
38gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete ge... 42 1.2
39ref|XM_751341.1| Ustilago maydis 521 hypothetical protein (UM002... 42 1.2
40emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.2
41gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 42 1.2
42ref|XM_310466.2| Anopheles gambiae str. PEST ENSANGP00000019196 ... 42 1.2
43tpe|BN000514.1| TPA: TPA_exp: Zea mays mRNA for putative cystati... 42 1.2
44emb|AM055639.1| Zea mays mRNA for partial putative cystatin (cc1... 42 1.2
45ref|XM_470612.1| Oryza sativa (japonica cultivar-group), predic... 40 4.8
46ref|XM_465924.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.8
47emb|AL450325.5| Human DNA sequence from clone RP11-17F15 on chro... 40 4.8
48gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 4.8
49emb|X59403.1|CGGAPPGK C.glutamicum gap, pgk and tpi genes for gl... 40 4.8
50emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 40 4.8
51emb|AL731621.3|OSJN00268 Oryza sativa genomic DNA, chromosome 4,... 40 4.8
52dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 40 4.8
53dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 4.8
54gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, gen... 40 4.8
55gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 4.8
56dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
57dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
58gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.8
59gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.8
60dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
61gb|AE005055.1| Halobacterium sp. NRC-1 section 86 of 170 of the ... 40 4.8
62dbj|AK120579.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
63dbj|AK105963.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
64emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4,... 40 4.8
65dbj|AB049823.1| Oryza sativa ALS mRNA for acetolactate synthase,... 40 4.8
66dbj|AB049822.1| Oryza sativa ALS mRNA for acetolactate synthase,... 40 4.8 
>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13
             map near C50029S, complete sequence
          Length = 129900

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                         
Query: 191   gccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtcctccagcgagccgccga 250
             |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct: 15446 gccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtgctccagcgcgccgcaga 15387

                
Query: 251   gga 253
             |||
Sbjct: 15386 gga 15384



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                 
Query: 74    gaaggaccgcggcgaggggctggggcgcgcgcttgtccggcagcgcaacaag 125
             ||||||||||||||||||||| || ||||||||   ||||||||| ||||||
Sbjct: 15557 gaaggaccgcggcgaggggctcggccgcgcgctgacccggcagcggaacaag 15506



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 329   ggatgggacgggggacacggaggaggagaggc 360
             ||||||||||| ||| ||||||||||||||||
Sbjct: 15189 ggatgggacggtggagacggaggaggagaggc 15158
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                            
Query: 191      gccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtcctccagcgagccgccga 250
                |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct: 24781750 gccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtgctccagcgcgccgcaga 24781691

                   
Query: 251      gga 253
                |||
Sbjct: 24781690 gga 24781688



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                    
Query: 74       gaaggaccgcggcgaggggctggggcgcgcgcttgtccggcagcgcaacaag 125
                ||||||||||||||||||||| || ||||||||   ||||||||| ||||||
Sbjct: 24781861 gaaggaccgcggcgaggggctcggccgcgcgctgacccggcagcggaacaag 24781810



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 329      ggatgggacgggggacacggaggaggagaggc 360
                ||||||||||| ||| ||||||||||||||||
Sbjct: 24781493 ggatgggacggtggagacggaggaggagaggc 24781462



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 225     gacgccgtcctccagcgagc 244
               ||||||||||||||||||||
Sbjct: 6918367 gacgccgtcctccagcgagc 6918348
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>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from
             chromosome 3 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 128559

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                         
Query: 191   gccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtcctccagcgagccgccga 250
             |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct: 67162 gccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtgctccagcgcgccgcaga 67103

                
Query: 251   gga 253
             |||
Sbjct: 67102 gga 67100



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                 
Query: 74    gaaggaccgcggcgaggggctggggcgcgcgcttgtccggcagcgcaacaag 125
             ||||||||||||||||||||| || ||||||||   ||||||||| ||||||
Sbjct: 67273 gaaggaccgcggcgaggggctcggccgcgcgctgacccggcagcggaacaag 67222



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 329   ggatgggacgggggacacggaggaggagaggc 360
             ||||||||||| ||| ||||||||||||||||
Sbjct: 66905 ggatgggacggtggagacggaggaggagaggc 66874
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                            
Query: 186      gcgctgccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtcctccagcgagcc 245
                |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 26371523 gcgcagccgctggagtccgtcatcgaggtcagcgacatcgacgccgtcctcgagcgcgcc 26371464

                       
Query: 246      gccgagg 252
                |||||||
Sbjct: 26371463 gccgagg 26371457



 Score = 46.1 bits (23), Expect = 0.078
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 87       gaggggctggggcgcgcgcttgtccggcagcgcaacaag 125
                |||||||||||||| |||||  |||||||||| ||||||
Sbjct: 26371616 gaggggctggggcgggcgctgatccggcagcggaacaag 26371578
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                            
Query: 191      gccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtcctccagcgagccgccga 250
                |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct: 24871534 gccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtgctccagcgcgccgcaga 24871475

                   
Query: 251      gga 253
                |||
Sbjct: 24871474 gga 24871472



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                    
Query: 74       gaaggaccgcggcgaggggctggggcgcgcgcttgtccggcagcgcaacaag 125
                ||||||||||||||||||||| || ||||||||   ||||||||| ||||||
Sbjct: 24871645 gaaggaccgcggcgaggggctcggccgcgcgctgacccggcagcggaacaag 24871594



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 329      ggatgggacgggggacacggaggaggagaggc 360
                ||||||||||| ||| ||||||||||||||||
Sbjct: 24871277 ggatgggacggtggagacggaggaggagaggc 24871246



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 225     gacgccgtcctccagcgagc 244
               ||||||||||||||||||||
Sbjct: 6916262 gacgccgtcctccagcgagc 6916243
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>dbj|AK103649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135D01, full
           insert sequence
          Length = 1907

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                       
Query: 191 gccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtcctccagcgagccgccga 250
           |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct: 48  gccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtgctccagcgcgccgcaga 107

              
Query: 251 gga 253
           |||
Sbjct: 108 gga 110



 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 290 cgccctgtccgccgcgctcggttccggcctcatcgatctggatgggacgggggacacgga 349
           |||||| |||||| ||||||| ||||| || ||||||||||||||||||| ||| |||||
Sbjct: 156 cgccctctccgcctcgctcggctccgggcttatcgatctggatgggacggtggagacgga 215

                      
Query: 350 ggaggagaggc 360
           |||||||||||
Sbjct: 216 ggaggagaggc 226
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>dbj|AK101466.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040I12, full
           insert sequence
          Length = 2243

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                       
Query: 186 gcgctgccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtcctccagcgagcc 245
           |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 204 gcgcagccgctggagtccgtcatcgaggtcagcgacatcgacgccgtcctcgagcgcgcc 263

                  
Query: 246 gccgagg 252
           |||||||
Sbjct: 264 gccgagg 270



 Score = 46.1 bits (23), Expect = 0.078
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 87  gaggggctggggcgcgcgcttgtccggcagcgcaacaag 125
           |||||||||||||| |||||  |||||||||| ||||||
Sbjct: 111 gaggggctggggcgggcgctgatccggcagcggaacaag 149
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>dbj|AK064308.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B10, full
           insert sequence
          Length = 1485

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                       
Query: 191 gccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtcctccagcgagccgccga 250
           |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct: 169 gccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtgctccagcgcgccgcaga 228

              
Query: 251 gga 253
           |||
Sbjct: 229 gga 231



 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 290 cgccctgtccgccgcgctcggttccggcctcatcgatctggatgggacgggggacacgga 349
           |||||| |||||| ||||||| ||||| || ||||||||||||||||||| ||| |||||
Sbjct: 277 cgccctctccgcctcgctcggctccgggcttatcgatctggatgggacggtggagacgga 336

                      
Query: 350 ggaggagaggc 360
           |||||||||||
Sbjct: 337 ggaggagaggc 347



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 74  gaaggaccgcggcgaggggctggggcgcgcgcttgtccggcagcgcaacaag 125
           ||||||||||||||||||||| || ||||||||   ||||||||| ||||||
Sbjct: 58  gaaggaccgcggcgaggggctcggccgcgcgctgacccggcagcggaacaag 109
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                            
Query: 186      gcgctgccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtcctccagcgagcc 245
                |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 26299692 gcgcagccgctggagtccgtcatcgaggtcagcgacatcgacgccgtcctcgagcgcgcc 26299633

                       
Query: 246      gccgagg 252
                |||||||
Sbjct: 26299632 gccgagg 26299626



 Score = 46.1 bits (23), Expect = 0.078
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 87       gaggggctggggcgcgcgcttgtccggcagcgcaacaag 125
                |||||||||||||| |||||  |||||||||| ||||||
Sbjct: 26299785 gaggggctggggcgggcgctgatccggcagcggaacaag 26299747
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>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131689

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                         
Query: 186   gcgctgccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtcctccagcgagcc 245
             |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 85796 gcgcagccgctggagtccgtcatcgaggtcagcgacatcgacgccgtcctcgagcgcgcc 85737

                    
Query: 246   gccgagg 252
             |||||||
Sbjct: 85736 gccgagg 85730



 Score = 46.1 bits (23), Expect = 0.078
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 87    gaggggctggggcgcgcgcttgtccggcagcgcaacaag 125
             |||||||||||||| |||||  |||||||||| ||||||
Sbjct: 85889 gaggggctggggcgggcgctgatccggcagcggaacaag 85851
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>ref|XM_479116.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 432

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 191 gccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtcctccagcgagccgccga 250
           |||||| ||||| ||||||||||||||| ||||||||||||| |||||||| || |||||
Sbjct: 117 gccgcttgagtctgtcatcgaggtcagccacatcgacgccgtgctccagcgtgctgccga 176

                         
Query: 251 ggaggagctcctcc 264
           ||| || |||||||
Sbjct: 177 ggaagacctcctcc 190
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>gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb0024A20, complete sequence
          Length = 129838

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                         
Query: 191   gccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtcctccagcgagccgccga 250
             |||||| ||||| ||||||||||||||| ||||||||||||| |||||||| || |||||
Sbjct: 81454 gccgcttgagtctgtcatcgaggtcagccacatcgacgccgtgctccagcgtgctgccga 81513

                           
Query: 251   ggaggagctcctcc 264
             ||| || |||||||
Sbjct: 81514 ggaagacctcctcc 81527
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                            
Query: 191      gccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtcctccagcgagccgccga 250
                |||||| ||||| ||||||||||||||| ||||||||||||| |||||||| || |||||
Sbjct: 25007699 gccgcttgagtctgtcatcgaggtcagccacatcgacgccgtgctccagcgtgctgccga 25007640

                              
Query: 251      ggaggagctcctcc 264
                ||| || |||||||
Sbjct: 25007639 ggaagacctcctcc 25007626
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>dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0018L13
          Length = 131155

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                         
Query: 191   gccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtcctccagcgagccgccga 250
             |||||| ||||| ||||||||||||||| ||||||||||||| |||||||| || |||||
Sbjct: 48379 gccgcttgagtctgtcatcgaggtcagccacatcgacgccgtgctccagcgtgctgccga 48320

                           
Query: 251   ggaggagctcctcc 264
             ||| || |||||||
Sbjct: 48319 ggaagacctcctcc 48306
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>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence
          Length = 78195

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 48/51 (94%)
 Strand = Plus / Plus

                                                                
Query: 190   tgccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtcctccagc 240
             |||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 45120 tgccgctcgagtccgtcatcgacgtcagtgacatcgacgccgtgctccagc 45170
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 115     agcgcaacaagcaggccttggccgccaag 143
               ||||||||||| |||||||||||||||||
Sbjct: 1430090 agcgcaacaaggaggccttggccgccaag 1430062



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    cggcctcatcgatctggatg 333
              ||||||||||||||||||||
Sbjct: 580199 cggcctcatcgatctggatg 580218
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 171     cgccgcgcgcagcaggcgctgccg 194
               ||||||||||||||||||||||||
Sbjct: 1367668 cgccgcgcgcagcaggcgctgccg 1367645
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 283     gcgccgccgccctgtccgccgcgctcgg 310
               |||||| |||||||||||||||||||||
Sbjct: 3294281 gcgccgtcgccctgtccgccgcgctcgg 3294308



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 269     cgacgacgcggagggcgccgccgc 292
               |||||||||||||| |||||||||
Sbjct: 5239417 cgacgacgcggaggccgccgccgc 5239440



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 284     cgccgccgccctgtccgccgcgctcggt 311
               |||||||||| || ||||||||||||||
Sbjct: 2806937 cgccgccgccgtggccgccgcgctcggt 2806964
to top
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence
          Length = 1207381

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 177    gcgcagcaggcgctgccgctcga 199
              |||||||||||||||||||||||
Sbjct: 148120 gcgcagcaggcgctgccgctcga 148142
to top
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 291    gccctgtccgccgcgctcggttc 313
              |||||||||||||||||||||||
Sbjct: 171806 gccctgtccgccgcgctcggttc 171784



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 279   gagggcgccgccgccctgtccgcc 302
             |||||| |||||||||||||||||
Sbjct: 61303 gagggcaccgccgccctgtccgcc 61326
to top
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 282    ggcgccgccgccctgtccgccgc 304
              |||||||||||||||||||||||
Sbjct: 180341 ggcgccgccgccctgtccgccgc 180319
to top
>emb|X70689.1|SLTRNASA S.lividans tRNA-Ser and tRNA-Arg genes
          Length = 2110

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 282 ggcgccgccgccctgtccgccgc 304
           |||||||||||||||||||||||
Sbjct: 254 ggcgccgccgccctgtccgccgc 232
to top
>gb|AE009740.1| Brucella melitensis 16M chromosome II, section 102 of 107 of the
            complete sequence
          Length = 10156

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 177  gcgcagcaggcgctgccgctcga 199
            |||||||||||||||||||||||
Sbjct: 4243 gcgcagcaggcgctgccgctcga 4221
to top
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence
          Length = 1162204

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 177    gcgcagcaggcgctgccgctcga 199
              |||||||||||||||||||||||
Sbjct: 147545 gcgcagcaggcgctgccgctcga 147567
to top
>ref|XM_313322.2| Anopheles gambiae str. PEST ENSANGP00000010432
           (ENSANGG00000007943), partial mRNA
          Length = 1260

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 211 aggtcagcgacatcgacgccgtc 233
           |||||||||||||||||||||||
Sbjct: 530 aggtcagcgacatcgacgccgtc 552
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 170    ccgccgcgcgcagcaggcgctgccgctcgag 200
              ||||||||||| |||||||||||||| ||||
Sbjct: 417711 ccgccgcgcgctgcaggcgctgccgcccgag 417741
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 83     cggcgaggggctggggcgcgcgc 105
              |||||||||||||||||||||||
Sbjct: 429624 cggcgaggggctggggcgcgcgc 429646
to top
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence,
              strain 2308
          Length = 1156948

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 177    gcgcagcaggcgctgccgctcga 199
              |||||||||||||||||||||||
Sbjct: 147608 gcgcagcaggcgctgccgctcga 147630
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 166     tctcccgccgcgcgcagcaggcgctgc 192
               |||||||||| ||||||||||||||||
Sbjct: 3328991 tctcccgccgggcgcagcaggcgctgc 3328965



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 285     gccgccgccctgtccgccgc 304
               ||||||||||||||||||||
Sbjct: 3045635 gccgccgccctgtccgccgc 3045654
to top
>gb|AY423269.1| Streptomyces diastaticus 108 cytochrome P450 monooxygenase (mnp1),
            type I polyketide synthase (mnp2), and cytochrome P450
            monooxygenase (mnp3) genes, complete cds
          Length = 13513

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 279  gagggcgccgccgccctgtccgccgc 304
            ||||||| ||||||||||||||||||
Sbjct: 1028 gagggcgtcgccgccctgtccgccgc 1053
to top
>gb|AE005755.1| Caulobacter crescentus CB15 section 81 of 359 of the complete genome
          Length = 12263

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 281  gggcgccgccgccctgtccgcc 302
            ||||||||||||||||||||||
Sbjct: 7189 gggcgccgccgccctgtccgcc 7168
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 285     gccgccgccctgtccgccgcgctcgg 310
               |||||||||||| |||||||||||||
Sbjct: 8582419 gccgccgccctggccgccgcgctcgg 8582394
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 284     cgccgccgccctgtccgccgcgctcg 309
               ||||||||||||||||||||| ||||
Sbjct: 1506243 cgccgccgccctgtccgccgccctcg 1506268



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 284     cgccgccgccctgtccgccgc 304
               |||||||||||||||||||||
Sbjct: 3874390 cgccgccgccctgtccgccgc 3874370



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 169     cccgccgcgcgcagcaggcgc 189
               |||||||||||||||||||||
Sbjct: 1703938 cccgccgcgcgcagcaggcgc 1703918
to top
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 111    cggcagcgcaacaagcaggcc 131
              |||||||||||||||||||||
Sbjct: 210783 cggcagcgcaacaagcaggcc 210763
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 174     cgcgcgcagcaggcgctgccgctcg 198
               |||| ||||||||||||||||||||
Sbjct: 3056302 cgcgagcagcaggcgctgccgctcg 3056278
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 169     cccgccgcgcgcagcaggcgc 189
               |||||||||||||||||||||
Sbjct: 1573200 cccgccgcgcgcagcaggcgc 1573180
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 169     cccgccgcgcgcagcaggcgc 189
               |||||||||||||||||||||
Sbjct: 2810001 cccgccgcgcgcagcaggcgc 2809981
to top
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome
          Length = 138390

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 283   gcgccgccgccctgtccgccg 303
             |||||||||||||||||||||
Sbjct: 34180 gcgccgccgccctgtccgccg 34200
to top
>ref|XM_751341.1| Ustilago maydis 521 hypothetical protein (UM00287.1) partial mRNA
          Length = 2940

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 113  gcagcgcaacaagcaggcctt 133
            |||||||||||||||||||||
Sbjct: 2644 gcagcgcaacaagcaggcctt 2624
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 169     cccgccgcgcgcagcaggcgc 189
               |||||||||||||||||||||
Sbjct: 2550234 cccgccgcgcgcagcaggcgc 2550214
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 218     cgacatcgacgccgtcctccagcga 242
               |||||||||||||||||||| ||||
Sbjct: 1836656 cgacatcgacgccgtcctccggcga 1836680
to top
>ref|XM_310466.2| Anopheles gambiae str. PEST ENSANGP00000019196 (ENSANGG00000016707),
            partial mRNA
          Length = 1788

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 75   aaggaccgcggcgaggggctggggcgcgc 103
            |||||||||||||||| ||||| ||||||
Sbjct: 1276 aaggaccgcggcgaggagctggtgcgcgc 1304
to top
>tpe|BN000514.1| TPA: TPA_exp: Zea mays mRNA for putative cystatin (cc10 gene)
          Length = 751

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 258 ctcctccacggcgacgacgcggagg 282
           |||||||||||| ||||||||||||
Sbjct: 379 ctcctccacggccacgacgcggagg 355
to top
>emb|AM055639.1| Zea mays mRNA for partial putative cystatin (cc10 gene)
          Length = 501

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 258 ctcctccacggcgacgacgcggagg 282
           |||||||||||| ||||||||||||
Sbjct: 252 ctcctccacggccacgacgcggagg 228
to top
>ref|XM_470612.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1248

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 225 gacgccgtcctccagcgagc 244
           ||||||||||||||||||||
Sbjct: 318 gacgccgtcctccagcgagc 299
to top
>ref|XM_465924.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1935

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 gccgccgccctgtccgccgc 304
           ||||||||||||||||||||
Sbjct: 25  gccgccgccctgtccgccgc 44
to top
>emb|AL450325.5| Human DNA sequence from clone RP11-17F15 on chromosome 6 Contains the
             5' end of the TReP-132 gene for zinc finger transcription
             protein, complete sequence
          Length = 88119

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   ggatgggacgggggacacgg 348
             ||||||||||||||||||||
Sbjct: 68992 ggatgggacgggggacacgg 69011
to top
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 174     cgcgcgcagcaggcgctgccgctc 197
               ||||||| ||||||||||||||||
Sbjct: 1969430 cgcgcgctgcaggcgctgccgctc 1969453
to top
>emb|X59403.1|CGGAPPGK C.glutamicum gap, pgk and tpi genes for glyceraldehyde-3-phosphate,
            phosphoglycerate kinase and triosephosphate isomerase
          Length = 3804

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 130  ccttggccgccaaggcgagg 149
            ||||||||||||||||||||
Sbjct: 1744 ccttggccgccaaggcgagg 1763
to top
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    cgccgccgccctgtccgccg 303
              ||||||||||||||||||||
Sbjct: 244016 cgccgccgccctgtccgccg 244035
to top
>emb|AL731621.3|OSJN00268 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0013O03,
             complete sequence
          Length = 118791

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   acgcggagggcgccgccgcc 293
             ||||||||||||||||||||
Sbjct: 88229 acgcggagggcgccgccgcc 88248
to top
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 227    cgccgtcctccagcgagccgccga 250
              |||||||||||||| |||||||||
Sbjct: 988390 cgccgtcctccagccagccgccga 988413
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    cgccgccgccctgtccgccg 303
              ||||||||||||||||||||
Sbjct: 821908 cgccgccgccctgtccgccg 821927
to top
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence
          Length = 103866

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   agggcgccgccgccctgtcc 299
             ||||||||||||||||||||
Sbjct: 29104 agggcgccgccgccctgtcc 29123
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 286     ccgccgccctgtccgccgcgctcg 309
               |||||||||||||| |||||||||
Sbjct: 2120470 ccgccgccctgtcccccgcgctcg 2120447
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                                
Query: 198      gagtccgtcatcgaggtcagcgacatcgacgccgtcctccagcgagcc 245
                ||||| |||||  |||||| |||||| |||| ||| ||||||||||||
Sbjct: 19128754 gagtctgtcattaaggtcaacgacatggacgacgtgctccagcgagcc 19128707



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 274      acgcggagggcgccgccgcc 293
                ||||||||||||||||||||
Sbjct: 13451873 acgcggagggcgccgccgcc 13451892
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 285      gccgccgccctgtccgccgc 304
                ||||||||||||||||||||
Sbjct: 18335927 gccgccgccctgtccgccgc 18335946
to top
>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12,
              complete sequence
          Length = 120392

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    gacgccgtcctccagcgagc 244
              ||||||||||||||||||||
Sbjct: 114300 gacgccgtcctccagcgagc 114281
to top
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11,
             complete sequence
          Length = 166072

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   gacgccgtcctccagcgagc 244
             ||||||||||||||||||||
Sbjct: 84964 gacgccgtcctccagcgagc 84945
to top
>dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0052M16
          Length = 145423

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    gccgccgccctgtccgccgc 304
              ||||||||||||||||||||
Sbjct: 137140 gccgccgccctgtccgccgc 137159
to top
>gb|AE005055.1| Halobacterium sp. NRC-1 section 86 of 170 of the complete genome
          Length = 12730

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 214  tcagcgacatcgacgccgtc 233
            ||||||||||||||||||||
Sbjct: 6808 tcagcgacatcgacgccgtc 6789
to top
>dbj|AK120579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135J09, full
           insert sequence
          Length = 1738

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 225 gacgccgtcctccagcgagc 244
           ||||||||||||||||||||
Sbjct: 438 gacgccgtcctccagcgagc 419
to top
>dbj|AK105963.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E04, full
           insert sequence
          Length = 1577

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 225 gacgccgtcctccagcgagc 244
           ||||||||||||||||||||
Sbjct: 433 gacgccgtcctccagcgagc 414
to top
>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
             complete sequence
          Length = 151936

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 198   gagtccgtcatcgaggtcagcgacatcgacgccgtcctccagcgagcc 245
             ||||| |||||  |||||| |||||| |||| ||| ||||||||||||
Sbjct: 62275 gagtctgtcattaaggtcaacgacatggacgacgtgctccagcgagcc 62228
to top
>dbj|AB049823.1| Oryza sativa ALS mRNA for acetolactate synthase, complete cds,
           herbicide resistant biotype
          Length = 2279

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 gccgccgccctgtccgccgc 304
           ||||||||||||||||||||
Sbjct: 56  gccgccgccctgtccgccgc 75
to top
>dbj|AB049822.1| Oryza sativa ALS mRNA for acetolactate synthase, complete cds,
           herbicide sensitive wild type
          Length = 2301

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 gccgccgccctgtccgccgc 304
           ||||||||||||||||||||
Sbjct: 72  gccgccgccctgtccgccgc 91


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,881,320
Number of Sequences: 3902068
Number of extensions: 2881320
Number of successful extensions: 74214
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70693
Number of HSP's gapped (non-prelim): 3521
length of query: 360
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 338
effective length of database: 17,147,199,772
effective search space: 5795753522936
effective search space used: 5795753522936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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