ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast60a10 |
|---|---|
| Clone Library Name | barley_pub |
>GALM_BOVIN (Q5EA79) Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)| Length = 342 Score = 52.0 bits (123), Expect = 7e-07 Identities = 23/53 (43%), Positives = 33/53 (62%) Frame = +3 Query: 288 IKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEYMRGSASFGATVGRVANRI 446 + + +WG + + V D +G +DVVLG+D Y++ FGA VGRVANRI Sbjct: 31 VDIISWGCTITALEVKDRQGRASDVVLGFDELEGYLQKQPYFGAVVGRVANRI 83
>GALM_PIG (Q9GKX6) Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)| Length = 342 Score = 51.2 bits (121), Expect = 1e-06 Identities = 23/53 (43%), Positives = 33/53 (62%) Frame = +3 Query: 288 IKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEYMRGSASFGATVGRVANRI 446 + + +WG + + V D +G +DVVLG+ EY++ FGA VGRVANRI Sbjct: 31 VDIISWGCTITALEVKDRQGRASDVVLGFAELKEYLQKHPYFGAVVGRVANRI 83
>GALM_MOUSE (Q8K157) Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)| Length = 342 Score = 50.4 bits (119), Expect = 2e-06 Identities = 23/59 (38%), Positives = 34/59 (57%) Frame = +3 Query: 270 KKGDFSIKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEYMRGSASFGATVGRVANRI 446 + S+ + +WG + + V D +G +DVVLG+ Y++ FGA VGRVANRI Sbjct: 25 RSDQLSVDIISWGCTITALQVKDRQGKASDVVLGFAELEGYLQKQPYFGAVVGRVANRI 83
>GALM_RAT (Q66HG4) Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)| Length = 342 Score = 49.7 bits (117), Expect = 3e-06 Identities = 25/68 (36%), Positives = 41/68 (60%) Frame = +3 Query: 243 AVGFYELKNKKGDFSIKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEYMRGSASFGAT 422 AV ++L++ + ++ + +WG + + V D +G +DVVLG+ Y++ FGA Sbjct: 18 AVEKFQLRSDQ--LNVDIISWGCTITALQVKDRQGKASDVVLGFAELEGYLQKQPYFGAV 75 Query: 423 VGRVANRI 446 VGRVANRI Sbjct: 76 VGRVANRI 83
>GALM_HUMAN (Q96C23) Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)| (BLOCK25 protein) Length = 342 Score = 48.5 bits (114), Expect = 7e-06 Identities = 21/53 (39%), Positives = 32/53 (60%) Frame = +3 Query: 288 IKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEYMRGSASFGATVGRVANRI 446 + + +WG + + V D +G +DVVLG+ Y++ FGA +GRVANRI Sbjct: 31 VDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGRVANRI 83
>GALM_PONPY (Q5R8U1) Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)| Length = 342 Score = 48.1 bits (113), Expect = 1e-05 Identities = 21/53 (39%), Positives = 32/53 (60%) Frame = +3 Query: 288 IKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEYMRGSASFGATVGRVANRI 446 + + +WG + + V D +G +DVVLG+ Y++ FGA +GRVANRI Sbjct: 31 VDIISWGCTITALEVKDRQGRSSDVVLGFAELEGYLQKQPYFGAVIGRVANRI 83
>GALM_SHIFL (P0A9C4) Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)| Length = 346 Score = 44.7 bits (104), Expect = 1e-04 Identities = 24/62 (38%), Positives = 37/62 (59%) Frame = +3 Query: 261 LKNKKGDFSIKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEYMRGSASFGATVGRVAN 440 L+N G + + +WGA L+SA +P S G + + +LG + Y +A GA++GR AN Sbjct: 20 LRNNAG-MVVTLMDWGATLLSARIPLSDGSVREALLGCASPECYQDQAAFLGASIGRYAN 78 Query: 441 RI 446 RI Sbjct: 79 RI 80
>GALM_ECOLI (P0A9C3) Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)| Length = 346 Score = 44.7 bits (104), Expect = 1e-04 Identities = 24/62 (38%), Positives = 37/62 (59%) Frame = +3 Query: 261 LKNKKGDFSIKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEYMRGSASFGATVGRVAN 440 L+N G + + +WGA L+SA +P S G + + +LG + Y +A GA++GR AN Sbjct: 20 LRNNAG-MVVTLMDWGATLLSARIPLSDGSVREALLGCASPECYQDQAAFLGASIGRYAN 78 Query: 441 RI 446 RI Sbjct: 79 RI 80
>GALM_ACICA (P05149) Aldose 1-epimerase precursor (EC 5.1.3.3) (Mutarotase)| Length = 381 Score = 41.6 bits (96), Expect = 0.001 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Frame = +3 Query: 246 VGFYELKNKKGDFSIKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEY----MRGSASF 413 V Y + N G S+ ++G + + PD++G ++VLG+D Y + F Sbjct: 37 VDLYTMSNNNG-VSVSFISFGGVITQILTPDAQGKQNNIVLGFDDLKGYEVTDTKEGIHF 95 Query: 414 GATVGRVANRI 446 G +GR ANRI Sbjct: 96 GGLIGRYANRI 106
>GAL10_PACTA (P40801) GAL10 bifunctional protein [Includes: UDP-glucose| 4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)] Length = 689 Score = 41.2 bits (95), Expect = 0.001 Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Frame = +3 Query: 276 GDFSIKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEYMR-GSASFGATVGRVANRI 446 G F + ++N GA +V+A + K + LG+D Y+R + FGAT+GRVANRI Sbjct: 372 GKFEVSISNHGATIVAAKLNGIK-----LNLGFDNLKGYLREDNPFFGATIGRVANRI 424
>GAL10_YEAST (P04397) GAL10 bifunctional protein [Includes: UDP-glucose| 4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)] Length = 699 Score = 36.2 bits (82), Expect = 0.038 Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = +3 Query: 282 FSIKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEYMR-GSASFGATVGRVANRI 446 F N GA++V D K + VVLGY+ Y+ SA GAT+GR ANRI Sbjct: 384 FQATFANLGASIV-----DLKVNGQSVVLGYENEEGYLNPDSAYIGATIGRYANRI 434
>GAL10_KLULA (P09609) GAL10 bifunctional protein [Includes: UDP-glucose| 4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)] Length = 688 Score = 35.0 bits (79), Expect = 0.084 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = +3 Query: 270 KKGDFSIKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEYM-RGSASFGATVGRVANRI 446 K F +K+ N GA +V +V VV D EY + + FGATVG ANRI Sbjct: 369 KGTSFEVKLANLGATIVDIVVNG-----CSVVASLDNETEYKDQSNPFFGATVGPYANRI 423
>GALM_STRTR (P21955) Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)| Length = 348 Score = 35.0 bits (79), Expect = 0.084 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +3 Query: 288 IKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEYMRGSASFGATVGRVANRI 446 I GA L +VP G L ++VLG+ +Y + + ++GRVA RI Sbjct: 29 ISTLTTGATLQEFLVPMETGALKNIVLGFSDFEDYYKNNLCACQSIGRVAGRI 81
>YN9A_YEAST (P53757) Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic| region Length = 342 Score = 35.0 bits (79), Expect = 0.084 Identities = 22/55 (40%), Positives = 26/55 (47%) Frame = +3 Query: 282 FSIKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEYMRGSASFGATVGRVANRI 446 F + GA LV D K + VV GY +Y+ GATVGR ANRI Sbjct: 21 FQATIAPLGATLV-----DLKVNGQSVVQGYSNVQDYLTDGNMMGATVGRYANRI 70
>GALM_LACHE (Q00053) Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase) (Fragment)| Length = 129 Score = 35.0 bits (79), Expect = 0.084 Identities = 20/62 (32%), Positives = 34/62 (54%) Frame = +3 Query: 261 LKNKKGDFSIKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEYMRGSASFGATVGRVAN 440 L+N G +KV N+GA L ++ D +++L ++ A+Y + G TVGR+A Sbjct: 21 LENDHG-MIVKVLNYGATLEKVLLNDE-----NMILSLNSPADYSQERNYLGGTVGRIAG 74 Query: 441 RI 446 R+ Sbjct: 75 RV 76
>GAL10_SCHPO (Q9HDU3) GAL10 bifunctional protein [Includes: UDP-glucose| 4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)] Length = 713 Score = 33.1 bits (74), Expect = 0.32 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 6/75 (8%) Frame = +3 Query: 240 SAVGFYELKNKKG-----DFSIKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEY-MRG 401 + +G + KN+ D + + N+GA LV A+ KG ++V G++ + Y ++ Sbjct: 359 NTLGIMDYKNRLHTICFQDLEVSIANYGA-LVQAV--RYKGR--NLVNGFNDFSRYKLKE 413 Query: 402 SASFGATVGRVANRI 446 + FGAT+GR ANRI Sbjct: 414 NPFFGATIGRFANRI 428
>HIRA_HUMAN (P54198) HIRA protein (TUP1-like enhancer of split protein 1)| Length = 1017 Score = 32.7 bits (73), Expect = 0.42 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Frame = -3 Query: 340 LSGTMAETRAAPQLVTLMEKSPFLFLSS*NPTADFRAALALPAS---ARHSSNATGRSAA 170 L+GTM + ++PQL+ L +P F +S T AA A PA + S NAT AA Sbjct: 488 LAGTMLSSHSSPQLLPLDSSTPNSFGASKPCTEPVVAASARPAGDSVNKDSMNATSTPAA 547 Query: 169 LA 164 L+ Sbjct: 548 LS 549
>GALM_HAEIN (P31765) Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)| Length = 340 Score = 32.0 bits (71), Expect = 0.71 Identities = 23/62 (37%), Positives = 34/62 (54%) Frame = +3 Query: 261 LKNKKGDFSIKVTNWGAALVSAIVPDSKGHLADVVLGYDTAAEYMRGSASFGATVGRVAN 440 L+N+ G ++ +WGA +S VP + L +V+LG Y + GA+VGR AN Sbjct: 20 LQNENG-MRVQFMDWGATWLSCKVPVNDT-LREVLLGCKVD-NYPTHQSYLGASVGRYAN 76 Query: 441 RI 446 RI Sbjct: 77 RI 78
>LRC24_HUMAN (Q50LG9) Leucine-rich repeat-containing protein 24 precursor| Length = 513 Score = 32.0 bits (71), Expect = 0.71 Identities = 21/45 (46%), Positives = 25/45 (55%) Frame = +1 Query: 190 RCCCALHWLAAPMLHGSQRSDSMNSRTRRGISPSRSPTGALPSSL 324 RC CALHWL A + G QR + SR R+ I + P AL S L Sbjct: 207 RCDCALHWLGAWIKEGGQR--LLTSRDRK-IMCAEPPRLALQSLL 248
>NODQ_AZOBR (P28604) NodQ bifunctional enzyme (Nodulation protein Q) [Includes:| Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) (Sulfate adenylate transferase) (SAT) (ATP-sulfurylase large subunit); Adenylyl-sulfate kinase (EC 2.7.1.25) (APS kinase) (A Length = 620 Score = 30.4 bits (67), Expect = 2.1 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -3 Query: 238 FRAALALPASARHSSNATGRSAAL 167 FR+ A+P SARH N RSAA+ Sbjct: 178 FRSVTAIPLSARHGDNVVHRSAAM 201
>YH10_YEAST (P38893) Hypothetical 37.9 kDa protein in TWT1-FLO5 intergenic| region Length = 341 Score = 30.0 bits (66), Expect = 2.7 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +3 Query: 318 VSAIVPDSKGHLADVVLGYDTAAEYMRGSASF-GATVGRVANRI 446 + A + D K + +VLGY Y+ ++ GATVGR ANRI Sbjct: 28 LGATLLDLKVNNESIVLGYPDIHGYISDGYNYIGATVGRYANRI 71
>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor| Length = 521 Score = 30.0 bits (66), Expect = 2.7 Identities = 23/66 (34%), Positives = 34/66 (51%) Frame = +1 Query: 127 SAVQRPRATSQ*WPELHFFLLRCCCALHWLAAPMLHGSQRSDSMNSRTRRGISPSRSPTG 306 S++Q R T W RC CALHWL + + G +R ++SR ++ I+ + P Sbjct: 202 SSLQVLRLTENPW--------RCDCALHWLGSWIKEGGRR--LLSSRDKK-ITCAEPPRL 250 Query: 307 ALPSSL 324 AL S L Sbjct: 251 ALQSLL 256
>MT2C_RABIT (P80290) Metallothionein-2C (MT-2C) (Metallothionein-IIC) (MT-IIC)| Length = 62 Score = 29.6 bits (65), Expect = 3.5 Identities = 11/33 (33%), Positives = 16/33 (48%) Frame = +2 Query: 137 NVPVRQANDGQSCTSSCCVAAVPCTGWQRQCCT 235 N A D +C +SC A CT ++ CC+ Sbjct: 4 NCSCATAGDSCTCANSCTCKACKCTSCKKSCCS 36
>MT2A_RABIT (P18055) Metallothionein-2A (MT-2A) (Metallothionein-IIA) (MT-IIA)| Length = 62 Score = 29.6 bits (65), Expect = 3.5 Identities = 11/33 (33%), Positives = 16/33 (48%) Frame = +2 Query: 137 NVPVRQANDGQSCTSSCCVAAVPCTGWQRQCCT 235 N A D +C +SC A CT ++ CC+ Sbjct: 4 NCSCAAAGDSCTCANSCTCKACKCTSCKKSCCS 36
>PAK7_HUMAN (Q9P286) Serine/threonine-protein kinase PAK 7 (EC 2.7.11.1)| (p21-activated kinase 7) (PAK-7) (PAK-5) Length = 719 Score = 29.3 bits (64), Expect = 4.6 Identities = 24/89 (26%), Positives = 36/89 (40%) Frame = -3 Query: 415 PNEAEPRIYSAAVSYPRTTSAKCPLLSGTMAETRAAPQLVTLMEKSPFLFLSS*NPTADF 236 P +EP + V Y R P LSG+ R +L KS + S P+ Sbjct: 319 PRLSEPTMCIPKVDYDRAQMVLSPPLSGSDTYPRGPAKLPQSQSKSGYSSSSHQYPSGYH 378 Query: 235 RAALALPASARHSSNATGRSAALAIIGLS 149 +A L S + SS ++ L+ + LS Sbjct: 379 KATLYHHPSLQSSSQYISTASYLSSLSLS 407
>PURL_RHOPA (Q6N9F2) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 736 Score = 28.9 bits (63), Expect = 6.0 Identities = 11/34 (32%), Positives = 20/34 (58%) Frame = -2 Query: 344 FAIRHNGRDEGSAPVGDLDGEIPLLVLEFIESDR 243 F ++H G+ + P+ +L E PL ++ES+R Sbjct: 352 FVVKHGGQVKADLPIKELGDEAPLYDRPWVESER 385
>COFD_NOCFA (Q5YQR9) LPPG:FO 2-phopspho-L-lactate transferase (EC 2.7.1.-)| Length = 332 Score = 28.5 bits (62), Expect = 7.9 Identities = 16/60 (26%), Positives = 29/60 (48%) Frame = -3 Query: 322 ETRAAPQLVTLMEKSPFLFLSS*NPTADFRAALALPASARHSSNATGRSAALAIIGLSHG 143 E + AP ++ L+E + + L+ NP A LA+P + T R+ + + G+ G Sbjct: 193 EAKPAPNVIDLIESADAVLLAPSNPVVSIGAILAVPGI--RGALRTTRAKVIGVSGVIDG 250
>DBP7_EMENI (Q5BGX6) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)| Length = 778 Score = 28.5 bits (62), Expect = 7.9 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +1 Query: 184 LLRCCCALHWLAAPMLHGSQRSDSMNSRTRRGISPSRSPTGALPSSL 324 LLRC HW+ A + G ++ S +R R+G++ + G L L Sbjct: 261 LLRCA---HWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHL 304
>DBP7_ASPOR (Q2UE66) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)| Length = 760 Score = 28.5 bits (62), Expect = 7.9 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +1 Query: 184 LLRCCCALHWLAAPMLHGSQRSDSMNSRTRRGISPSRSPTGALPSSL 324 LLRC HW+ A + G ++ S +R R+G++ + G L L Sbjct: 248 LLRCA---HWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHL 291
>SEM6D_PONPY (Q5R7F5) Semaphorin-6D precursor| Length = 1017 Score = 28.5 bits (62), Expect = 7.9 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Frame = +2 Query: 140 VPVRQANDGQSCTSSCCVAAVPCTGW--QRQCCTEVSGRIL*TQEQEGGFLHQGHQLGRC 313 +P+ + SC SC + P GW Q C G + EQ+ F + H LG C Sbjct: 510 IPLSRCERYGSCKKSCIASRDPYCGWLSQGSCGRVTPGMLAEGYEQDAEFGNTAH-LGDC 568
>DBP7_ASPFU (Q4WV71) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)| Length = 758 Score = 28.5 bits (62), Expect = 7.9 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +1 Query: 184 LLRCCCALHWLAAPMLHGSQRSDSMNSRTRRGISPSRSPTGALPSSL 324 LLRC HW+ A + G ++ S +R R+G++ + G L L Sbjct: 248 LLRCA---HWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHL 291
>5HTR_HELVI (Q25190) 5-hydroxytryptamine receptor (5-HT receptor) (Serotonin| receptor) Length = 466 Score = 28.5 bits (62), Expect = 7.9 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +3 Query: 246 VGFYELKNKKGDFSIKVTNWGAALVSAIVP 335 V + ++N+K F++ V WGAALV ++ P Sbjct: 167 VDYIHIRNEKRIFTMIVLVWGAALVVSLAP 196 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,539,369 Number of Sequences: 219361 Number of extensions: 974141 Number of successful extensions: 3218 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 3119 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3214 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
