ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast60a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466392.1| Oryza sativa (japonica cultivar-group), mRNA 68 3e-08
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
3dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
4dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
5dbj|AK109600.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
6gb|BT016428.1| Zea mays clone Contig261 mRNA sequence 58 3e-05
7ref|XM_472738.1| Oryza sativa (japonica cultivar-group), predic... 48 0.025
8emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4,... 48 0.025
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
10dbj|AK104444.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
11dbj|AK059553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
12gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 1.5
13gb|BC053102.1| Mus musculus phosphatidylinositol 3 kinase, regul... 42 1.5
14dbj|AK135693.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 42 1.5
15dbj|AK132341.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 42 1.5
16dbj|AK163413.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 42 1.5
17dbj|AK161822.1| Mus musculus 13 days embryo male testis cDNA, RI... 42 1.5
18ref|XM_571791.1| Cryptococcus neoformans var. neoformans JEC21 c... 42 1.5
19gb|S79169.1| p55PIK=phosphatidylinositol 3-kinase regulatory sub... 42 1.5
20dbj|AK031936.1| Mus musculus adult male medulla oblongata cDNA, ... 42 1.5
21ref|NM_022213.1| Rattus norvegicus phosphatidylinositol 3 kinase... 42 1.5
22ref|NM_181585.4| Mus musculus phosphatidylinositol 3 kinase, reg... 42 1.5
23emb|AL670603.6| Mouse DNA sequence from clone RP23-276M23 on chr... 42 1.5
24emb|AL732493.17| Mouse DNA sequence from clone RP23-358F6 on chr... 42 1.5
25dbj|D64047.1|RATPI3KC Rattus norvegicus mRNA for phosphatidylino... 42 1.5
26ref|XM_472739.1| Oryza sativa (japonica cultivar-group), predic... 40 6.0
27gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic ge... 40 6.0
28gb|AY652953.1| Lyngbya majuscula strain 19L curacin biosynthesis... 40 6.0
29gb|AE017308.1| Mycoplasma mobile 163K complete genome 40 6.0
30ref|XM_882560.1| PREDICTED: Bos taurus similar to RAP guanine-nu... 40 6.0
31ref|XM_882554.1| PREDICTED: Bos taurus similar to RAP guanine-nu... 40 6.0
32ref|XM_882548.1| PREDICTED: Bos taurus similar to RAP guanine-nu... 40 6.0
33ref|XM_615454.2| PREDICTED: Bos taurus similar to RAP guanine-nu... 40 6.0
34ref|XM_882537.1| PREDICTED: Bos taurus similar to RAP guanine-nu... 40 6.0
35gb|AC135116.2| Mus musculus BAC clone RP24-316A1 from chromosome... 40 6.0
36ref|XM_798896.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.0
37ref|XM_538388.2| PREDICTED: Canis familiaris similar to CDC42 ef... 40 6.0
38gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.0
39gb|AC068327.14| Homo sapiens chromosome 15, clone RP11-394G8, co... 40 6.0
40gb|AC026583.10| Homo sapiens chromosome 15, clone RP11-20C17, co... 40 6.0
41dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
42gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.0
43dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
44dbj|AK106058.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
45emb|CR974479.17| Pig DNA sequence from clone PigE-150P18 on chro... 40 6.0
46gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 6.0 
>ref|XM_466392.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1299

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 270 aagaagggggatttctccatcaaggtcaccaactgggg 307
           |||||||||||||||||||||| |||||||||||||||
Sbjct: 156 aagaagggggatttctccatcagggtcaccaactgggg 193
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                      
Query: 270      aagaagggggatttctccatcaaggtcaccaactgggg 307
                |||||||||||||||||||||| |||||||||||||||
Sbjct: 22122036 aagaagggggatttctccatcagggtcaccaactgggg 22122073
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>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0703B01
          Length = 137445

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                   
Query: 270   aagaagggggatttctccatcaaggtcaccaactgggg 307
             |||||||||||||||||||||| |||||||||||||||
Sbjct: 95935 aagaagggggatttctccatcagggtcaccaactgggg 95972
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>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1342F01
          Length = 153287

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                   
Query: 270   aagaagggggatttctccatcaaggtcaccaactgggg 307
             |||||||||||||||||||||| |||||||||||||||
Sbjct: 17880 aagaagggggatttctccatcagggtcaccaactgggg 17917
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>dbj|AK109600.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-E04, full
           insert sequence
          Length = 1324

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 270 aagaagggggatttctccatcaaggtcaccaactgggg 307
           |||||||||||||||||||||| |||||||||||||||
Sbjct: 156 aagaagggggatttctccatcagggtcaccaactgggg 193
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>gb|BT016428.1| Zea mays clone Contig261 mRNA sequence
          Length = 1373

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 275 gggggatttctccatcaaggtcaccaactgggg 307
           ||||||||||||| |||||||||||||||||||
Sbjct: 125 gggggatttctccgtcaaggtcaccaactgggg 157
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>ref|XM_472738.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1206

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 272 gaagggggatttctccatcaaggtcaccaactgggg 307
           |||||| ||||||||||||| ||||||||| |||||
Sbjct: 123 gaagggagatttctccatcagggtcaccaattgggg 158
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>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21,
             complete sequence
          Length = 138969

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 272   gaagggggatttctccatcaaggtcaccaactgggg 307
             |||||| ||||||||||||| ||||||||| |||||
Sbjct: 77451 gaagggagatttctccatcagggtcaccaattgggg 77486



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 272   gaagggggatttctccatcaaggtcaccaactgggg 307
             ||||||||| |||||| | ||| |||||||||||||
Sbjct: 86184 gaagggggacttctccgtgaagatcaccaactgggg 86219
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 272      gaagggggatttctccatcaaggtcaccaactgggg 307
                |||||| ||||||||||||| ||||||||| |||||
Sbjct: 22868676 gaagggagatttctccatcagggtcaccaattgggg 22868711



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 272      gaagggggatttctccatcaaggtcaccaactgggg 307
                ||||||||| |||||| | ||| |||||||||||||
Sbjct: 22877409 gaagggggacttctccgtgaagatcaccaactgggg 22877444
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>dbj|AK104444.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-H06, full
           insert sequence
          Length = 1285

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 272 gaagggggatttctccatcaaggtcaccaactgggg 307
           |||||| ||||||||||||| ||||||||| |||||
Sbjct: 152 gaagggagatttctccatcagggtcaccaattgggg 187
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>dbj|AK059553.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G05, full
           insert sequence
          Length = 1329

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 272 gaagggggatttctccatcaaggtcaccaactgggg 307
           |||||| ||||||||||||| ||||||||| |||||
Sbjct: 176 gaagggagatttctccatcagggtcaccaattgggg 211
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>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete
              sequence
          Length = 1347793

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 168    agagctgcacttcttcctgtt 188
              |||||||||||||||||||||
Sbjct: 196837 agagctgcacttcttcctgtt 196857
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>gb|BC053102.1| Mus musculus phosphatidylinositol 3 kinase, regulatory subunit,
            polypeptide 3 (p55), mRNA (cDNA clone MGC:62506
            IMAGE:6405534), complete cds
          Length = 5038

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 359  tgttgtccttgggtatgacactgct 383
            |||||| ||||||||||||||||||
Sbjct: 1101 tgttgttcttgggtatgacactgct 1077
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>dbj|AK135693.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420404G12
            product:phosphatidylinositol 3 kinase, regulatory
            subunit, polypeptide 3 (p55), full insert sequence
          Length = 2565

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 359  tgttgtccttgggtatgacactgct 383
            |||||| ||||||||||||||||||
Sbjct: 1410 tgttgttcttgggtatgacactgct 1386
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>dbj|AK132341.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
            library, clone:4022425J21 product:phosphatidylinositol 3
            kinase, regulatory subunit, polypeptide 3 (p55), full
            insert sequence
          Length = 5277

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 359  tgttgtccttgggtatgacactgct 383
            |||||| ||||||||||||||||||
Sbjct: 1376 tgttgttcttgggtatgacactgct 1352
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>dbj|AK163413.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
            clone:B020039N04 product:phosphatidylinositol 3 kinase,
            regulatory subunit, polypeptide 3 (p55), full insert
            sequence
          Length = 2132

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 359  tgttgtccttgggtatgacactgct 383
            |||||| ||||||||||||||||||
Sbjct: 1375 tgttgttcttgggtatgacactgct 1351
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>dbj|AK161822.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:6030479M24
            product:phosphatidylinositol 3 kinase, regulatory
            subunit, polypeptide 3 (p55), full insert sequence
          Length = 2965

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 359  tgttgtccttgggtatgacactgct 383
            |||||| ||||||||||||||||||
Sbjct: 1369 tgttgttcttgggtatgacactgct 1345
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>ref|XM_571791.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7
          Length = 5621

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 168  agagctgcacttcttcctgtt 188
            |||||||||||||||||||||
Sbjct: 1492 agagctgcacttcttcctgtt 1512
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>gb|S79169.1| p55PIK=phosphatidylinositol 3-kinase regulatory subunit [mice, F442a
            adipose-cell, mRNA, 5742 nt]
          Length = 5742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 359  tgttgtccttgggtatgacactgct 383
            |||||| ||||||||||||||||||
Sbjct: 2078 tgttgttcttgggtatgacactgct 2054
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>dbj|AK031936.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
            enriched library, clone:6330501K11
            product:phosphatidylinositol 3 kinase, regulatory
            subunit, polypeptide 3 (p55), full insert sequence
          Length = 2138

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 359  tgttgtccttgggtatgacactgct 383
            |||||| ||||||||||||||||||
Sbjct: 1018 tgttgttcttgggtatgacactgct 994
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>ref|NM_022213.1| Rattus norvegicus phosphatidylinositol 3 kinase, regulatory
           subunit, polypeptide 3 (Pik3r3), mRNA
          Length = 1386

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 359 tgttgtccttgggtatgacactgct 383
           |||||| ||||||||||||||||||
Sbjct: 707 tgttgttcttgggtatgacactgct 683
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>ref|NM_181585.4| Mus musculus phosphatidylinositol 3 kinase, regulatory subunit,
            polypeptide 3 (p55) (Pik3r3), mRNA
          Length = 5038

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 359  tgttgtccttgggtatgacactgct 383
            |||||| ||||||||||||||||||
Sbjct: 1101 tgttgttcttgggtatgacactgct 1077
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>emb|AL670603.6| Mouse DNA sequence from clone RP23-276M23 on chromosome 4, complete
              sequence
          Length = 173696

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 359    tgttgtccttgggtatgacactgct 383
              |||||| ||||||||||||||||||
Sbjct: 125776 tgttgttcttgggtatgacactgct 125752
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>emb|AL732493.17| Mouse DNA sequence from clone RP23-358F6 on chromosome 2, complete
             sequence
          Length = 195388

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   ctgctattagtagtgctgtgc 136
             |||||||||||||||||||||
Sbjct: 12828 ctgctattagtagtgctgtgc 12808
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>dbj|D64047.1|RATPI3KC Rattus norvegicus mRNA for phosphatidylinositol 3-kinase p55
           subunit, complete cds
          Length = 1386

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 359 tgttgtccttgggtatgacactgct 383
           |||||| ||||||||||||||||||
Sbjct: 707 tgttgttcttgggtatgacactgct 683
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>ref|XM_472739.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1092

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 272 gaagggggatttctccatcaaggtcaccaactgggg 307
           ||||||||| |||||| | ||| |||||||||||||
Sbjct: 114 gaagggggacttctccgtgaagatcaccaactgggg 149
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>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete
             sequence
          Length = 113193

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 55    cgagcgcaccgccggcgccctccc 78
             ||||||||||||||||||| ||||
Sbjct: 11662 cgagcgcaccgccggcgccgtccc 11685
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>gb|AY652953.1| Lyngbya majuscula strain 19L curacin biosynthesis gene cluster,
             complete sequence
          Length = 87427

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   gacggttgggcgtgtagcca 438
             ||||||||||||||||||||
Sbjct: 75835 gacggttgggcgtgtagcca 75854
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>gb|AE017308.1| Mycoplasma mobile 163K complete genome
          Length = 777079

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    actgctgctgaatatatgcg 397
              ||||||||||||||||||||
Sbjct: 365561 actgctgctgaatatatgcg 365542
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>ref|XM_882560.1| PREDICTED: Bos taurus similar to RAP guanine-nucleotide-exchange
            factor 3, transcript variant 5 (LOC535383), mRNA
          Length = 3371

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  aatgatggccagagctgcac 177
            ||||||||||||||||||||
Sbjct: 2852 aatgatggccagagctgcac 2871
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>ref|XM_882554.1| PREDICTED: Bos taurus similar to RAP guanine-nucleotide-exchange
            factor 3, transcript variant 4 (LOC535383), mRNA
          Length = 3397

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  aatgatggccagagctgcac 177
            ||||||||||||||||||||
Sbjct: 2855 aatgatggccagagctgcac 2874
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>ref|XM_882548.1| PREDICTED: Bos taurus similar to RAP guanine-nucleotide-exchange
           factor 3, transcript variant 3 (LOC535383), mRNA
          Length = 1323

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 158 aatgatggccagagctgcac 177
           ||||||||||||||||||||
Sbjct: 781 aatgatggccagagctgcac 800
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>ref|XM_615454.2| PREDICTED: Bos taurus similar to RAP guanine-nucleotide-exchange
            factor 3, transcript variant 1 (LOC535383), mRNA
          Length = 3394

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  aatgatggccagagctgcac 177
            ||||||||||||||||||||
Sbjct: 2852 aatgatggccagagctgcac 2871
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>ref|XM_882537.1| PREDICTED: Bos taurus similar to RAP guanine-nucleotide-exchange
           factor 3, transcript variant 2 (LOC535383), mRNA
          Length = 1391

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 158 aatgatggccagagctgcac 177
           ||||||||||||||||||||
Sbjct: 849 aatgatggccagagctgcac 868
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>gb|AC135116.2| Mus musculus BAC clone RP24-316A1 from chromosome 5, complete sequence
          Length = 138444

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   caagaagggggatttctcca 288
             ||||||||||||||||||||
Sbjct: 81086 caagaagggggatttctcca 81067
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>ref|XM_798896.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509341.20) partial mRNA
          Length = 2376

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 173  tgcacttcttcctgttgcgt 192
            ||||||||||||||||||||
Sbjct: 1586 tgcacttcttcctgttgcgt 1567
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>ref|XM_538388.2| PREDICTED: Canis familiaris similar to CDC42 effector protein (Rho
           GTPase binding) 1 (LOC481267), mRNA
          Length = 496

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 63  ccgccggcgccctcccctgc 82
           ||||||||||||||||||||
Sbjct: 305 ccgccggcgccctcccctgc 324
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 49      gcccatcgagcgcaccgccg 68
               ||||||||||||||||||||
Sbjct: 4530659 gcccatcgagcgcaccgccg 4530678
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>gb|AC068327.14| Homo sapiens chromosome 15, clone RP11-394G8, complete sequence
          Length = 177539

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    gtatgacactgctgctgaat 390
              ||||||||||||||||||||
Sbjct: 141055 gtatgacactgctgctgaat 141036
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>gb|AC026583.10| Homo sapiens chromosome 15, clone RP11-20C17, complete sequence
          Length = 175472

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   gtatgacactgctgctgaat 390
             ||||||||||||||||||||
Sbjct: 19937 gtatgacactgctgctgaat 19918
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 110     accactctgctattagtagt 129
               ||||||||||||||||||||
Sbjct: 2795219 accactctgctattagtagt 2795200
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 46      cgcgcccatcgagcgcaccg 65
               ||||||||||||||||||||
Sbjct: 3631325 cgcgcccatcgagcgcaccg 3631344
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>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1364A02
          Length = 137933

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   accactctgctattagtagt 129
             ||||||||||||||||||||
Sbjct: 98780 accactctgctattagtagt 98761
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>dbj|AK106058.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F10, full
           insert sequence
          Length = 1343

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 272 gaagggggatttctccatcaaggtcaccaactgggg 307
           ||||||||| |||||| | ||| |||||||||||||
Sbjct: 177 gaagggggacttctccgtgaagatcaccaactgggg 212
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>emb|CR974479.17| Pig DNA sequence from clone PigE-150P18 on chromosome 7, complete
             sequence
          Length = 152730

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    caccgccggcgccctcccct 80
             ||||||||||||||||||||
Sbjct: 77269 caccgccggcgccctcccct 77288
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     cgcgcaacccggcgacgaac 42
              ||||||||||||||||||||
Sbjct: 797988 cgcgcaacccggcgacgaac 797969


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,207,643
Number of Sequences: 3902068
Number of extensions: 3207643
Number of successful extensions: 58662
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58323
Number of HSP's gapped (non-prelim): 339
length of query: 447
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 425
effective length of database: 17,147,199,772
effective search space: 7287559903100
effective search space used: 7287559903100
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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