ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast60a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KLH17_HUMAN (Q6TDP4) Kelch-like protein 17 (Actinfilin) 32 0.82
2KLH17_RAT (Q8K430) Kelch-like protein 17 (Actinfilin) 32 1.1
3KLH17_MOUSE (Q6TDP3) Kelch-like protein 17 (Actinfilin) 32 1.1
4IAA24_ORYSA (Q6ZL57) Auxin-responsive protein IAA24 (Indoleaceti... 31 1.4
5CXX1_HUMAN (O15255) CAAX box protein 1 (Cerebral protein 5) 31 1.4
6MOVP_ACLSA (P54892) Putative movement protein (50.4 kDa protein)... 31 1.4
7ANX11_HUMAN (P50995) Annexin A11 (Annexin XI) (Calcyclin-associa... 31 1.8
8NFAC4_HUMAN (Q14934) Nuclear factor of activated T-cells, cytopl... 29 5.3
9PTP14_STYPL (P28206) Tyrosine-protein phosphatase 14 (EC 3.1.3.4... 29 6.9
10GS1_NEUCR (P38678) Glucan synthesis regulatory protein 28 9.1
11ILVD_DECAR (Q47JC0) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD) 28 9.1
12WEE1_SCHPO (P07527) Mitosis inhibitor protein kinase wee1 (EC 2.... 28 9.1

>KLH17_HUMAN (Q6TDP4) Kelch-like protein 17 (Actinfilin)|
          Length = 642

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = -3

Query: 343 SPPGYSGTPCLTSGQRPPPLPGSQSSMPKWNSRGRSYM*TRSSALSGSHFLPGEAEGS 170
           S  GY G  CL S +R  PL G+ +S+   ++R R     R + L G+ +  G  + S
Sbjct: 440 SAGGYDGASCLNSAERYDPLTGTWTSVAAMSTRRRY---VRVATLDGNLYAVGGYDSS 494



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>KLH17_RAT (Q8K430) Kelch-like protein 17 (Actinfilin)|
          Length = 640

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = -3

Query: 334 GYSGTPCLTSGQRPPPLPGSQSSMPKWNSRGRSYM*TRSSALSGSHFLPGEAEGS 170
           GY G  CL S +R  PL G+ +S+   ++R R     R + L G+ +  G  + S
Sbjct: 441 GYDGASCLNSAERYDPLTGTWTSIAAMSTRRRY---VRVATLDGNLYAVGGYDSS 492



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>KLH17_MOUSE (Q6TDP3) Kelch-like protein 17 (Actinfilin)|
          Length = 640

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = -3

Query: 334 GYSGTPCLTSGQRPPPLPGSQSSMPKWNSRGRSYM*TRSSALSGSHFLPGEAEGS 170
           GY G  CL S +R  PL G+ +S+   ++R R     R + L G+ +  G  + S
Sbjct: 441 GYDGASCLNSAERYDPLTGTWTSIAAMSTRRRY---VRVATLDGNLYAVGGYDSS 492



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>IAA24_ORYSA (Q6ZL57) Auxin-responsive protein IAA24 (Indoleacetic acid-induced|
           protein 24)
          Length = 219

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 32/119 (26%), Positives = 40/119 (33%), Gaps = 6/119 (5%)
 Frame = -3

Query: 400 STTCWYGAM-TSLSMLCCRLSPPGYSGTPCLTSGQRPPPLPGSQSSMPKWNSRGRSYM*T 224
           ST+C   A  T    LC RL PPG S T   T+G   P    S  +     S       T
Sbjct: 9   STSCLASAAETDADNLCLRLGPPGSSITTTTTTGGADPAAKRSLGAKRSLESTDSMASGT 68

Query: 223 RSSALSGSH----FLPGEAEGSPWXXXXXXXXXXXXXXXRYQEA-KKSAAAREKNQTSG 62
            +SA    H      P +A+   W                   A KK    ++K Q  G
Sbjct: 69  GTSAAGDEHDDDTAAPAKAQVVGWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQQG 127



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>CXX1_HUMAN (O15255) CAAX box protein 1 (Cerebral protein 5)|
          Length = 209

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = -3

Query: 436 RSS*PVESFKKSSTTCWYGAMTSLSMLCCRLSPPGYSGTPCLTSGQRPPPLPGSQSSMPK 257
           R+S P+E  +    +C   ++   + LC R S PG    P  +    PPP P SQ + P 
Sbjct: 40  RASLPLEPPRCPLRSC---SLPRSACLCSRNSAPGSCCRPWASLWSEPPPSPSSQPAPPM 96

Query: 256 W 254
           +
Sbjct: 97  Y 97



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>MOVP_ACLSA (P54892) Putative movement protein (50.4 kDa protein) (ORF2)|
          Length = 457

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 334 GYSGTPCLTSGQRPPPLPGSQSSMPKWNSRGRS 236
           G S  P + SG+R   +PG +   P W  RG S
Sbjct: 354 GGSAEPPIKSGRRSESVPGRRRQTPSWKDRGNS 386



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>ANX11_HUMAN (P50995) Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50)|
           (CAP-50) (56 kDa autoantigen)
          Length = 505

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -3

Query: 340 PPG-YSGTPCLT-SGQRPPPLPGSQSSMPKW 254
           PPG Y G P +T  GQ P PLPG Q  +P +
Sbjct: 140 PPGAYPGQPPVTYPGQPPVPLPGQQQPVPSY 170



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>NFAC4_HUMAN (Q14934) Nuclear factor of activated T-cells, cytoplasmic 4|
           (NF-ATc4) (NFATc4) (T cell transcription factor NFAT3)
           (NF-AT3)
          Length = 902

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = -3

Query: 355 CCRLS---PPGYSGTPCLTSGQRPPPLPGSQSSMPK 257
           CCRL+   PP Y   P +   + PPP PG  S  P+
Sbjct: 43  CCRLALGEPPPYGAAP-IGIPRPPPPRPGMHSPPPR 77



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>PTP14_STYPL (P28206) Tyrosine-protein phosphatase 14 (EC 3.1.3.48) (Fragment)|
          Length = 116

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +3

Query: 297 LWPDVRHGVPEYPGG-LNLQHNIDK 368
           +WPD  HGVP  PGG LN  H I++
Sbjct: 81  VWPD--HGVPSDPGGVLNFLHEINE 103



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>GS1_NEUCR (P38678) Glucan synthesis regulatory protein|
          Length = 532

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -3

Query: 307 SGQRPPPLPGSQSSMPKWNS--RGRSYM*TRSSALSGSHFLPGEAEGSP 167
           SG R PP PGS    P  ++  RGRS      ++   S   PG  + SP
Sbjct: 389 SGMRSPPTPGSPYQSPTEHNEPRGRSLHRLTGTSPMSSPIRPGYGKPSP 437



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>ILVD_DECAR (Q47JC0) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 618

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -2

Query: 281 GLPVEHAEVELEGQVVHVDAQQRLVRIA 198
           G P+E  +V+++GQV+H+D    +V+ A
Sbjct: 145 GGPMEAGKVKIQGQVIHLDLIDAMVKAA 172



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>WEE1_SCHPO (P07527) Mitosis inhibitor protein kinase wee1 (EC 2.7.11.1) (P107|
           protein kinase homolog)
          Length = 877

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = -3

Query: 406 KSSTTCWYGAMTSLSMLCCRLSPPGYSGTPCLTSGQRPPPLPGSQSSMPKWNSRGRSYM* 227
           K+++T    +  S SM    +SPP +S +P L S Q  PP   +Q    K N        
Sbjct: 152 KNASTGVKRSFFSSSMSNGAMSPPSHSPSPFLQSSQHIPPSTPAQKLRKKNN-------- 203

Query: 226 TRSSALSGSHFLP 188
             S  +S SH  P
Sbjct: 204 FDSFRISNSHISP 216


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,933,476
Number of Sequences: 219361
Number of extensions: 889670
Number of successful extensions: 4064
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4057
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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