| Clone Name | bast60a08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009222.1| Triticum aestivum clone wle1n.pk0075.a12:fis, full insert mRNA sequence Length = 1306 Score = 474 bits (239), Expect = e-130 Identities = 307/330 (93%), Gaps = 6/330 (1%) Strand = Plus / Plus Query: 1 accacatccgaacccaaatcttcgcttctccatcgccatggctctctcctccctcttcgt 60 ||||||||||||||||||||| ||| |||| |||||||||||||||| ||||||||||| Sbjct: 38 accacatccgaacccaaatctgcgcccctccgtcgccatggctctctcatccctcttcgt 97 Query: 61 ttccctccccatccccctcccgaagctgccatccacctccaaatcaagccgtttcctccc 120 ||||||||| ||||| ||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 98 ctccctccccctccccatcccgaagccgccatccacctccaaatcaagccgcttcctccc 157 Query: 121 tatccgggcctctgccgccgccgc------cgccccatcttttgacctgcgccgctactg 174 |||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 158 tatccgggcctctgccgccgccgcgaccgcctccccatcttttgacctgcgccgctactg 217 Query: 175 gacttcgctgatctcggaggtcgagggcgagctcgatgccgcgatgccaatccgtccgcc 234 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 218 gacctcgctgatctcggaggtcgagggcgagctcgatgccgcgatgcccatccgcccgcc 277 Query: 235 ggagagcatccacaacgccatgcgccacgccgtcctcccgggtgccggaaaggagggcgc 294 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 278 ggagagcatccacaacgccatgcgccacgccgtcctcccgggcgccgggaaggagggcgc 337 Query: 295 cgccaagcgcgcgcccccggtcctctgcgt 324 ||||||||||||||||||||| |||||||| Sbjct: 338 cgccaagcgcgcgcccccggttctctgcgt 367 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 384 tggagatgctccacggagcgtccctcgtgcacgacgacttgccgtgctt 432 ||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 427 tggagatgctccacgcggcgtccctcgtgcacgacgacctgccgtgctt 475
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 186 bits (94), Expect = 4e-44 Identities = 247/297 (83%), Gaps = 12/297 (4%) Strand = Plus / Minus Query: 34 cgccatggctctctcctccctcttcgtttccctccccatccccctcccgaagctgccatc 93 ||||||||||||||||||| ||| | | ||||||||| || || |||||||| || Sbjct: 27142891 cgccatggctctctcctccttctccatgtccctccccttcgcc------aagctgccttc 27142838 Query: 94 cacctccaaatcaagccgtttcctccctatccgggcctc---tgccgccgccgccgcc-- 148 |||||||||||| | ||| ||||| || ||||||||||| |||||||||||||||| Sbjct: 27142837 cacctccaaatccacccgcttccttcccatccgggcctcctctgccgccgccgccgcctc 27142778 Query: 149 -ccatcttttgacctgcgccgctactggacttcgctgatctcggaggtcgagggcgagct 207 || || || || |||||| ||| ||||| || |||||| | || || |||| |||||| Sbjct: 27142777 cccttccttcgatttgcgcctctattggacatccctgatcgccgatgtggaggccgagct 27142718 Query: 208 cgatgccgcgatgccaatccgtccgccggagagcatccacaacgccatgcgccacgccgt 267 ||| ||||||||||| ||||| |||||||||| |||||| |||||||||| ||||||| Sbjct: 27142717 cgacgccgcgatgcccatccgcacgccggagagaatccactccgccatgcgctacgccgt 27142658 Query: 268 cctcccgggtgccggaaaggagggcgccgccaagcgcgcgcccccggtcctctgcgt 324 ||||||||| ||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct: 27142657 cctcccgggcgccggcaacgagggcaccgccaagcgcgcgcccccggtcctctgcgt 27142601 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 386 gagatgctccacggagcgtccctcgtgcacgacgac 421 ||||||||||||| ||||| ||||||||||||||| Sbjct: 27142539 gagatgctccacgcggcgtcgctcgtgcacgacgac 27142504 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 25691079 gcctctgccgccgccgccgcc 25691099 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ctctgccgccgccgccgccc 149 |||||||||||||||||||| Sbjct: 33014541 ctctgccgccgccgccgccc 33014522 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 32490921 gcctctgccgccgccgccgc 32490940 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcccca 151 ||||| |||||||||||||||||| Sbjct: 12999708 gcctccgccgccgccgccgcccca 12999685 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 28150 gcctctgccgccgccgccgc 28131
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 186 bits (94), Expect = 4e-44 Identities = 247/297 (83%), Gaps = 12/297 (4%) Strand = Plus / Minus Query: 34 cgccatggctctctcctccctcttcgtttccctccccatccccctcccgaagctgccatc 93 ||||||||||||||||||| ||| | | ||||||||| || || |||||||| || Sbjct: 39340 cgccatggctctctcctccttctccatgtccctccccttcgcc------aagctgccttc 39287 Query: 94 cacctccaaatcaagccgtttcctccctatccgggcctc---tgccgccgccgccgcc-- 148 |||||||||||| | ||| ||||| || ||||||||||| |||||||||||||||| Sbjct: 39286 cacctccaaatccacccgcttccttcccatccgggcctcctctgccgccgccgccgcctc 39227 Query: 149 -ccatcttttgacctgcgccgctactggacttcgctgatctcggaggtcgagggcgagct 207 || || || || |||||| ||| ||||| || |||||| | || || |||| |||||| Sbjct: 39226 cccttccttcgatttgcgcctctattggacatccctgatcgccgatgtggaggccgagct 39167 Query: 208 cgatgccgcgatgccaatccgtccgccggagagcatccacaacgccatgcgccacgccgt 267 ||| ||||||||||| ||||| |||||||||| |||||| |||||||||| ||||||| Sbjct: 39166 cgacgccgcgatgcccatccgcacgccggagagaatccactccgccatgcgctacgccgt 39107 Query: 268 cctcccgggtgccggaaaggagggcgccgccaagcgcgcgcccccggtcctctgcgt 324 ||||||||| ||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct: 39106 cctcccgggcgccggcaacgagggcaccgccaagcgcgcgcccccggtcctctgcgt 39050 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 386 gagatgctccacggagcgtccctcgtgcacgacgac 421 ||||||||||||| ||||| ||||||||||||||| Sbjct: 38988 gagatgctccacgcggcgtcgctcgtgcacgacgac 38953
>dbj|AK111401.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-E03, full insert sequence Length = 1689 Score = 180 bits (91), Expect = 2e-42 Identities = 245/297 (82%), Gaps = 12/297 (4%) Strand = Plus / Plus Query: 34 cgccatggctctctcctccctcttcgtttccctccccatccccctcccgaagctgccatc 93 ||||||||||||||||||| ||| | | ||||||||| || || |||||||| || Sbjct: 65 cgccatggctctctcctccttctccatgtccctccccttcgcc------aagctgccttc 118 Query: 94 cacctccaaatcaagccgtttcctccctatccgggcctct------gccgccgccgccgc 147 |||||||||||| | ||| ||||| || ||||||||||| |||||||||||| | Sbjct: 119 cacctccaaatccacccgcttccttcccatccgggcctcctctgccgccgccgccgcctc 178 Query: 148 cccatcttttgacctgcgccgctactggacttcgctgatctcggaggtcgagggcgagct 207 ||| || || || |||||| ||| ||||| || |||||| | || || |||| |||||| Sbjct: 179 cccttccttcgatttgcgcctctattggacatccctgatcgccgatgtggaggccgagct 238 Query: 208 cgatgccgcgatgccaatccgtccgccggagagcatccacaacgccatgcgccacgccgt 267 ||| ||||||||||| ||||| |||||||||| |||||| |||||||||| ||||||| Sbjct: 239 cgacgccgcgatgcccatccgcacgccggagagaatccactccgccatgcgctacgccgt 298 Query: 268 cctcccgggtgccggaaaggagggcgccgccaagcgcgcgcccccggtcctctgcgt 324 ||||||||| ||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct: 299 cctcccgggcgccggcaacgagggcaccgccaagcgcgcgcccccggtcctctgcgt 355 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 386 gagatgctccacggagcgtccctcgtgcacgacgac 421 ||||||||||||| ||||| ||||||||||||||| Sbjct: 417 gagatgctccacgcggcgtcgctcgtgcacgacgac 452
>dbj|AK105878.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C07, full insert sequence Length = 1638 Score = 180 bits (91), Expect = 2e-42 Identities = 245/297 (82%), Gaps = 12/297 (4%) Strand = Plus / Plus Query: 34 cgccatggctctctcctccctcttcgtttccctccccatccccctcccgaagctgccatc 93 ||||||||||||||||||| ||| | | ||||||||| || || |||||||| || Sbjct: 20 cgccatggctctctcctccttctccatgtccctccccttcgcc------aagctgccttc 73 Query: 94 cacctccaaatcaagccgtttcctccctatccgggcctct------gccgccgccgccgc 147 |||||||||||| | ||| ||||| || ||||||||||| |||||||||||| | Sbjct: 74 cacctccaaatccacccgcttccttcccatccgggcctcctctgccgccgccgccgcctc 133 Query: 148 cccatcttttgacctgcgccgctactggacttcgctgatctcggaggtcgagggcgagct 207 ||| || || || |||||| ||| ||||| || |||||| | || || |||| |||||| Sbjct: 134 cccttccttcgatttgcgcctctattggacatccctgatcgccgatgtggaggccgagct 193 Query: 208 cgatgccgcgatgccaatccgtccgccggagagcatccacaacgccatgcgccacgccgt 267 ||| ||||||||||| ||||| |||||||||| |||||| |||||||||| ||||||| Sbjct: 194 cgacgccgcgatgcccatccgcacgccggagagaatccactccgccatgcgctacgccgt 253 Query: 268 cctcccgggtgccggaaaggagggcgccgccaagcgcgcgcccccggtcctctgcgt 324 ||||||||| ||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct: 254 cctcccgggcgccggcaacgagggcaccgccaagcgcgcgcccccggtcctctgcgt 310 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 386 gagatgctccacggagcgtccctcgtgcacgacgac 421 ||||||||||||| ||||| ||||||||||||||| Sbjct: 372 gagatgctccacgcggcgtcgctcgtgcacgacgac 407
>dbj|AK100459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091L04, full insert sequence Length = 1394 Score = 180 bits (91), Expect = 2e-42 Identities = 245/297 (82%), Gaps = 12/297 (4%) Strand = Plus / Plus Query: 34 cgccatggctctctcctccctcttcgtttccctccccatccccctcccgaagctgccatc 93 ||||||||||||||||||| ||| | | ||||||||| || || |||||||| || Sbjct: 42 cgccatggctctctcctccttctccatgtccctccccttcgcc------aagctgccttc 95 Query: 94 cacctccaaatcaagccgtttcctccctatccgggcctct------gccgccgccgccgc 147 |||||||||||| | ||| ||||| || ||||||||||| |||||||||||| | Sbjct: 96 cacctccaaatccacccgcttccttcccatccgggcctcctctgccgccgccgccgcctc 155 Query: 148 cccatcttttgacctgcgccgctactggacttcgctgatctcggaggtcgagggcgagct 207 ||| || || || |||||| ||| ||||| || |||||| | || || |||| |||||| Sbjct: 156 cccttccttcgatttgcgcctctattggacatccctgatcgccgatgtggaggccgagct 215 Query: 208 cgatgccgcgatgccaatccgtccgccggagagcatccacaacgccatgcgccacgccgt 267 ||| ||||||||||| ||||| |||||||||| |||||| |||||||||| ||||||| Sbjct: 216 cgacgccgcgatgcccatccgcacgccggagagaatccactccgccatgcgctacgccgt 275 Query: 268 cctcccgggtgccggaaaggagggcgccgccaagcgcgcgcccccggtcctctgcgt 324 ||||||||| ||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct: 276 cctcccgggcgccggcaacgagggcaccgccaagcgcgcgcccccggtcctctgcgt 332 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 386 gagatgctccacggagcgtccctcgtgcacgacgac 421 ||||||||||||| ||||| ||||||||||||||| Sbjct: 394 gagatgctccacgcggcgtcgctcgtgcacgacgac 429
>dbj|AK106165.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-B06, full insert sequence Length = 1155 Score = 60.0 bits (30), Expect = 6e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 295 cgccaagcgcgcgcccccggtcctctgcgt 324 |||||||||||||||||||||||||||||| Sbjct: 1 cgccaagcgcgcgcccccggtcctctgcgt 30 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 386 gagatgctccacggagcgtccctcgtgcacgacgac 421 ||||||||||||| ||||| ||||||||||||||| Sbjct: 92 gagatgctccacgcggcgtcgctcgtgcacgacgac 127
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 251 gccatgcgccacgccgtcctcccgggtgccggaaaggagggcgccgccaagcgcgcgccc 310 ||||||||| |||||||||||||| | ||| | | |||||| ||||||||| ||||||| Sbjct: 34398121 gccatgcgctacgccgtcctcccgagggccagcgacgagggcaccgccaagcacgcgccc 34398062 Query: 311 cc 312 || Sbjct: 34398061 cc 34398060 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 39333649 gcctctgccgccgccgccgcc 39333669 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccatc 153 ||||||||||||||||||||| Sbjct: 8327178 tgccgccgccgccgccccatc 8327158 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gccgccgccgccgccccatc 153 |||||||||||||||||||| Sbjct: 42006770 gccgccgccgccgccccatc 42006789 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 41424960 tgccgccgccgccgccccat 41424979 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 41416442 tgccgccgccgccgccccat 41416461 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gccgccgccgccgccccatc 153 |||||||||||||||||||| Sbjct: 40907866 gccgccgccgccgccccatc 40907847 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 31023047 tgccgccgccgccgccccat 31023028 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 31014584 tgccgccgccgccgccccat 31014565 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 28999344 tgccgccgccgccgccccat 28999325 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 28990909 tgccgccgccgccgccccat 28990890 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ctgccgccgccgccgcccca 151 |||||||||||||||||||| Sbjct: 25701348 ctgccgccgccgccgcccca 25701367 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gccgccgccgccgccccatc 153 |||||||||||||||||||| Sbjct: 11667015 gccgccgccgccgccccatc 11666996 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 8009881 cctctgccgccgccgccgcc 8009900
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 251 gccatgcgccacgccgtcctcccgggtgccggaaaggagggcgccgccaagcgcgcgccc 310 ||||||||| |||||||||||||| | ||| | | |||||| ||||||||| ||||||| Sbjct: 80465 gccatgcgctacgccgtcctcccgagggccagcgacgagggcaccgccaagcacgcgccc 80406 Query: 311 cc 312 || Sbjct: 80405 cc 80404
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 126 gggcctctgccgccgccgccgcc 148 ||||||||||||||||||||||| Sbjct: 1145021 gggcctctgccgccgccgccgcc 1144999 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 126 gggcctctgccgccgccgccgcc 148 ||||||||||||||||||||||| Sbjct: 1131704 gggcctctgccgccgccgccgcc 1131682 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 26202039 cctctgccgccgccgccgcc 26202020 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 18359313 tgccgccgccgccgccccat 18359332 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 18278684 tgccgccgccgccgccccat 18278703 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 5727963 cctctgccgccgccgccgcc 5727944 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 1314188 tgccgccgccgccgccccat 1314169
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 126 gggcctctgccgccgccgccgcc 148 ||||||||||||||||||||||| Sbjct: 121244 gggcctctgccgccgccgccgcc 121222 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 126 gggcctctgccgccgccgccgcc 148 ||||||||||||||||||||||| Sbjct: 107927 gggcctctgccgccgccgccgcc 107905
>ref|NM_002196.2| Homo sapiens insulinoma-associated 1 (INSM1), mRNA Length = 2838 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 124 ccgggcctctgccgccgccgccgccc 149 ||||||| |||||||||||||||||| Sbjct: 296 ccgggccgctgccgccgccgccgccc 321
>gb|BT018168.1| Zea mays clone EL01N0556G10.c mRNA sequence Length = 1215 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 130 ctctgccgccgccgccgcccca 151 |||||||||||||||||||||| Sbjct: 91 ctctgccgccgccgccgcccca 112
>ref|XM_867377.1| PREDICTED: Bos taurus similar to Neurexin-2-beta precursor (Neurexin II-beta) (LOC615536), partial mRNA Length = 256 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 115 cctccctatccgggcctctgccgccgccgccgcc 148 ||||||| ||||||| ||||||||||||||||| Sbjct: 47 cctccctggccgggcccctgccgccgccgccgcc 80
>emb|CT025568.7| Mouse DNA sequence from clone RP23-374L19 on chromosome 9, complete sequence Length = 183916 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 43 tctctcctccctcttcgtttccctcc 68 |||||||||||||||| ||||||||| Sbjct: 42404 tctctcctccctcttcctttccctcc 42429
>gb|AC122381.2| Mus musculus BAC clone RP23-477C4 from chromosome 16, complete sequence Length = 188889 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 44 ctctcctccctcttcgtttccctccccatccccctccc 81 ||||||||||||||| | |||||| || |||||||||| Sbjct: 43584 ctctcctccctcttcctctccctctccttccccctccc 43547
>emb|AL161658.21| Human DNA sequence from clone RP11-470C13 on chromosome 20 Contains the 3' end of the gene for KIAA1272 protein (similar to rat tulip proteins 1 and 2), the INSM1 gene for insulinoma-associated protein 1, the 3' end of the C20orf26 gene and a CpG island, complete sequence Length = 67356 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 124 ccgggcctctgccgccgccgccgccc 149 ||||||| |||||||||||||||||| Sbjct: 34973 ccgggccgctgccgccgccgccgccc 34998
>dbj|AK122989.1| Homo sapiens cDNA FLJ16747 fis, clone FCBBF3008159, highly similar to Homo sapiens ribosomal S6 protein kinase mRNA Length = 4190 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgccc 149 |||||||||||||||||||||| Sbjct: 150 gcctctgccgccgccgccgccc 129
>dbj|AK122921.1| Homo sapiens cDNA FLJ16601 fis, clone TESTI4007369, highly similar to Homo sapiens ribosomal protein S6 kinase, 52kDa, polypeptide 1 (RPS6KC1) Length = 4138 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgccc 149 |||||||||||||||||||||| Sbjct: 134 gcctctgccgccgccgccgccc 113
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 127 ggcctctgccgccgccgccgcc 148 |||||||||||||||||||||| Sbjct: 3859141 ggcctctgccgccgccgccgcc 3859162 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gccgccgccgccgccccatc 153 |||||||||||||||||||| Sbjct: 13612068 gccgccgccgccgccccatc 13612087 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 732235 tgccgccgccgccgccccat 732216
>dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1080A02 Length = 151360 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 127 ggcctctgccgccgccgccgcc 148 |||||||||||||||||||||| Sbjct: 98657 ggcctctgccgccgccgccgcc 98678
>emb|AL606971.22| Mouse DNA sequence from clone RP23-123I20 on chromosome 4, complete sequence Length = 91841 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 60 tttccctccccatccccctccc 81 |||||||||||||||||||||| Sbjct: 49491 tttccctccccatccccctccc 49512
>gb|AC155925.2| Mus musculus BAC clone RP24-248C21 from 9, complete sequence Length = 171521 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 43 tctctcctccctcttcgtttccctcc 68 |||||||||||||||| ||||||||| Sbjct: 140449 tctctcctccctcttcctttccctcc 140474
>gb|BC104769.1| Homo sapiens ribosomal protein S6 kinase, 52kDa, polypeptide 1, mRNA (cDNA clone MGC:132429 IMAGE:8143772), complete cds Length = 3354 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgccc 149 |||||||||||||||||||||| Sbjct: 77 gcctctgccgccgccgccgccc 56
>gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cytochrome P450-like protein, putative DNA-binding protein homolog, TATA-binding protein, hypothetical protein M3E9.200, 3-glucanase, K-exchanger-like protein, small heat shock-like protein, methionine synthase protein, putative far-red impaired response protein, and putative vegetative storage protein genes, complete cds Length = 100773 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 ggcctctgccgccgccgccgcc 148 |||||||||||||||||||||| Sbjct: 29358 ggcctctgccgccgccgccgcc 29337
>emb|BX284615.6| Mouse DNA sequence from clone RP23-20B20 on chromosome 2, complete sequence Length = 98233 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 44 ctctcctccctcttcgtttccctccccatccccctccc 81 ||||||||||||| | | ||||||||| |||||||||| Sbjct: 96403 ctctcctccctctccctctccctccccttccccctccc 96366
>emb|AL954713.11| Mouse DNA sequence from clone RP23-463K8 on chromosome 2, complete sequence Length = 171734 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 44 ctctcctccctcttcgtttccctccccatccccctccc 81 ||||||||||||| | | ||||||||| |||||||||| Sbjct: 170 ctctcctccctctccctctccctccccttccccctccc 133
>gb|M93119.1|HUMIA1X Human zinc-finger DNA-binding motifs (IA-1) mRNA, complete cds Length = 2838 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 124 ccgggcctctgccgccgccgccgccc 149 ||||||| |||||||||||||||||| Sbjct: 296 ccgggccgctgccgccgccgccgccc 321
>ref|NM_187863.1| Oryza sativa (japonica cultivar-group), Ozsa8307 predicted mRNA Length = 1659 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 tgccgccgccgccgccccatc 153 ||||||||||||||||||||| Sbjct: 812 tgccgccgccgccgccccatc 832
>gb|AC132262.2| Mus musculus chromosome 5 clone RP24-370J24, complete sequence Length = 176466 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 43 tctctcctccctcttcgtttccctc 67 |||||||||||||||| |||||||| Sbjct: 53745 tctctcctccctcttcctttccctc 53721
>ref|XM_509956.1| PREDICTED: Pan troglodytes similar to Glia maturation factor, beta (LOC452914), mRNA Length = 513 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 ggcctctgccgccgccgccgc 147 ||||||||||||||||||||| Sbjct: 248 ggcctctgccgccgccgccgc 268
>ref|XM_466971.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1462 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 490 gcctctgccgccgccgccgcc 470
>ref|XM_506883.1| PREDICTED Oryza sativa (japonica cultivar-group), P0010C01.23-1 mRNA Length = 2039 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 1005 gcctctgccgccgccgccgcc 985
>ref|NM_190334.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4347 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 768 gcctctgccgccgccgccgcc 748
>ref|XM_469388.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1431 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 716 gcctctgccgccgccgccgcc 696
>ref|NM_174134.2| Bos taurus oxytocin receptor (OXTR), mRNA Length = 2270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 878 gcctctgccgccgccgccgcc 858
>gb|AY023143.1| Oryza sativa microsatellite MRG5468 containing (GCC)X8, closest to marker S10045, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 95 gcctctgccgccgccgccgcc 115
>gb|AC159810.2| Mus musculus BAC clone RP24-94A19 from chromosome 9, complete sequence Length = 168537 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 43 tctctcctccctcttcgtttccctccccatccccctc 79 ||||| ||||| |||| | |||||||||||||||||| Sbjct: 119019 tctcttctcccccttcctctccctccccatccccctc 119055
>ref|XM_870938.1| PREDICTED: Bos taurus similar to cerebellin 1 precursor protein (LOC618604), mRNA Length = 1294 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 ccgggcctctgccgccgccgccgcc 148 ||||||| ||||||||||||||||| Sbjct: 125 ccgggccgctgccgccgccgccgcc 101
>gb|AC107720.16| Mus musculus chromosome 5, clone RP23-188F20, complete sequence Length = 206182 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 170214 gcctctgccgccgccgccgcc 170194
>gb|AC134429.3| Mus musculus BAC clone RP24-344D20 from chromosome 9, complete sequence Length = 180602 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 tccctccccatccccctcccgaagc 86 |||||||||||||||||||| |||| Sbjct: 118683 tccctccccatccccctccccaagc 118659
>gb|AC122221.4| Mus musculus BAC clone RP23-128B1 from chromosome 5, complete sequence Length = 216207 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 43 tctctcctccctcttcgtttccctc 67 |||||||||||||||| |||||||| Sbjct: 6115 tctctcctccctcttcctttccctc 6139
>gb|AC110261.25| Mus musculus chromosome 1, clone RP23-289I3, complete sequence Length = 213116 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 111046 gcctctgccgccgccgccgcc 111066
>ref|NM_010938.2| Mus musculus nuclear respiratory factor 1 (Nrf1), mRNA Length = 3586 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 28 gcctctgccgccgccgccgcc 8
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 ccgggcctctgccgccgccgccgcc 148 ||||||||||||||| ||||||||| Sbjct: 34354265 ccgggcctctgccgctgccgccgcc 34354289 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 27696793 gcctctgccgccgccgccgcc 27696773 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ctgccgccgccgccgcccca 151 |||||||||||||||||||| Sbjct: 28019647 ctgccgccgccgccgcccca 28019666
>ref|XM_193558.6| PREDICTED: Mus musculus IBR domain containing 1 (Ibrdc1), mRNA Length = 2834 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 ccgggcctctgccgccgccgccgcc 148 ||||| ||||||||||||||||||| Sbjct: 688 ccgggtctctgccgccgccgccgcc 664
>ref|XM_992201.1| PREDICTED: Mus musculus RIKEN cDNA 1700080G18 gene (1700080G18Rik), mRNA Length = 1521 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 914 gcctctgccgccgccgccgcc 934
>ref|XM_988959.1| PREDICTED: Mus musculus RIKEN cDNA 1700080G18 gene (1700080G18Rik), mRNA Length = 1341 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 734 gcctctgccgccgccgccgcc 754
>ref|XM_001000195.1| PREDICTED: Mus musculus RIKEN cDNA 1700080G18 gene (1700080G18Rik), mRNA Length = 1593 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 986 gcctctgccgccgccgccgcc 1006
>ref|XM_984550.1| PREDICTED: Mus musculus hypothetical protein LOC666551 (LOC666551), mRNA Length = 1071 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 888 gcctctgccgccgccgccgcc 908
>gb|AC132229.3| Mus musculus BAC clone RP24-484C7 from chromosome 5, complete sequence Length = 170292 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 49029 gcctctgccgccgccgccgcc 49009
>gb|AC116557.30| Mus musculus strain C57BL/6J clone rp23-239f10 map 8, complete sequence Length = 232571 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 ccgggcctctgccgccgccgccgcc 148 ||||| ||||||||||||||||||| Sbjct: 157900 ccgggtctctgccgccgccgccgcc 157924
>ref|XM_538455.2| PREDICTED: Canis familiaris similar to Protein C2orf29 (LOC481334), mRNA Length = 2433 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 147 gcctctgccgccgccgccgcc 127
>gb|AC090681.13| Homo sapiens 12 BAC RP11-369C14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 93582 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 65405 gcctctgccgccgccgccgcc 65385
>gb|AC104101.5| Mus musculus BAC clone RP24-377D2 from chromosome 5, complete sequence Length = 185414 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 43 tctctcctccctcttcgtttccctc 67 |||||||||||||||| |||||||| Sbjct: 135030 tctctcctccctcttcctttccctc 135054
>gb|AC126430.3| Mus musculus BAC clone RP24-406F17 from chromosome 10, complete sequence Length = 154482 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 ccgggcctctgccgccgccgccgcc 148 ||||| ||||||||||||||||||| Sbjct: 127117 ccgggtctctgccgccgccgccgcc 127093
>emb|CT009481.4| Human DNA sequence from clone DAAP-143K21 on chromosome 6, complete sequence Length = 13073 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 45 tctcctccctcttcgtttccctccccatccccctccc 81 |||||||||||| | | ||||||||| |||||||||| Sbjct: 12178 tctcctccctctccctctccctccccctccccctccc 12142
>gb|AC004920.2| Homo sapiens PAC clone RP5-898O18 from 7, complete sequence Length = 103421 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 53147 gcctctgccgccgccgccgcc 53167
>ref|XM_535169.2| PREDICTED: Canis familiaris similar to amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein (LOC477985), mRNA Length = 2751 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 ctctgccgccgccgccgcccc 150 ||||||||||||||||||||| Sbjct: 2426 ctctgccgccgccgccgcccc 2446
>gb|DQ249182.1| Homo sapiens isolate 541CLS41 haplotype HLA-B5001/HLA-Cw0602 genomic sequence Length = 346809 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 45 tctcctccctcttcgtttccctccccatccccctccc 81 |||||||||||| | | ||||||||| |||||||||| Sbjct: 307613 tctcctccctctccctctccctccccctccccctccc 307649
>gb|DQ249181.1| Homo sapiens isolate 541CLS37 haplotype HLA-B070201/HLA-Cw07020103 genomic sequence Length = 341361 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 45 tctcctccctcttcgtttccctccccatccccctccc 81 |||||||||||| | | ||||||||| |||||||||| Sbjct: 310701 tctcctccctctccctctccctccccctccccctccc 310737
>gb|DQ249178.1| Homo sapiens isolate 388CLS44 haplotype HLA-B570101/HLA-Cw0602 genomic sequence Length = 89624 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 45 tctcctccctcttcgtttccctccccatccccctccc 81 |||||||||||| | | ||||||||| |||||||||| Sbjct: 49008 tctcctccctctccctctccctccccctccccctccc 49044
>gb|DQ249177.1| Homo sapiens isolate 218CLS60 haplotype HLA-B15010101/HLA-Cw030401 genomic sequence Length = 351341 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 45 tctcctccctcttcgtttccctccccatccccctccc 81 |||||||||||| | | ||||||||| |||||||||| Sbjct: 322638 tctcctccctctccctctccctccccctccccctccc 322674
>gb|DQ249174.1| Homo sapiens isolate 144CLS49 haplotype HLA-B080101/HLA-Cw070101 genomic sequence Length = 338544 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 45 tctcctccctcttcgtttccctccccatccccctccc 81 |||||||||||| | | ||||||||| |||||||||| Sbjct: 318708 tctcctccctctccctctccctccccctccccctccc 318744
>gb|DQ249172.1| Homo sapiens isolate 135CLS49 haplotype HLA-B080101/HLA-Cw070101 genomic sequence Length = 342745 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 45 tctcctccctcttcgtttccctccccatccccctccc 81 |||||||||||| | | ||||||||| |||||||||| Sbjct: 299314 tctcctccctctccctctccctccccctccccctccc 299350
>gb|AC145394.1| Pan troglodytes BAC clone RP43-83L19 from 7, complete sequence Length = 144147 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 13019 gcctctgccgccgccgccgcc 13039
>gb|DQ123805.1| Euterpe oleracea poliphenol oxidase mRNA, partial cds Length = 683 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 ggagagcatccacaacgccat 255 ||||||||||||||||||||| Sbjct: 465 ggagagcatccacaacgccat 485
>ref|NM_005354.2| Homo sapiens jun D proto-oncogene (JUND), mRNA Length = 1891 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 ccgggcctctgccgccgccgccgcc 148 ||||||| ||||||||||||||||| Sbjct: 642 ccgggccgctgccgccgccgccgcc 666
>emb|AJ007044.1|OCU7044 Oryctolagus Cuniculus sod gene Length = 8778 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 1724 gcctctgccgccgccgccgcc 1704
>emb|AL662844.12| Human DNA sequence from clone XXbac-299F13 on chromosome 6 contains the gene for STG protein, the CDSN gene for corneodesmosin, the gene for SEEK1 protein, the gene for SPR1 protein, the gene for HCR, the TCF19 gene for transcription factor 19, the POU5F1 gene for POU domain, class 5, transcription factor 1, a putative novel transcript and four CpG islands, complete sequence Length = 204298 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 45 tctcctccctcttcgtttccctccccatccccctccc 81 |||||||||||| | | ||||||||| |||||||||| Sbjct: 7810 tctcctccctctccctctccctccccctccccctccc 7774
>emb|AL663093.10| Human DNA sequence from clone XXbac-31G15 on chromosome 6 contains a novel protein, a putative novel transcript and four CpG islands, complete sequence Length = 117327 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 45 tctcctccctcttcgtttccctccccatccccctccc 81 |||||||||||| | | ||||||||| |||||||||| Sbjct: 113050 tctcctccctctccctctccctccccctccccctccc 113014
>emb|X56681.1|HSJUNDR Human junD mRNA Length = 1891 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 ccgggcctctgccgccgccgccgcc 148 ||||||| ||||||||||||||||| Sbjct: 642 ccgggccgctgccgccgccgccgcc 666
>emb|X15723.1|HSFURIN Human fur gene, exons 1 through 8 Length = 14977 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 ccgggcctctgccgccgccgccgcc 148 ||||||| ||||||||||||||||| Sbjct: 7654 ccgggccgctgccgccgccgccgcc 7678
>emb|BX842624.1| Neurospora crassa DNA linkage group I BAC clone B10D6 Length = 89019 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 67479 gcctctgccgccgccgccgcc 67459
>emb|CR759805.5| Human DNA sequence from clone DAMC-11N4 on chromosome 6, complete sequence Length = 56809 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 45 tctcctccctcttcgtttccctccccatccccctccc 81 |||||||||||| | | ||||||||| |||||||||| Sbjct: 3226 tctcctccctctccctctccctccccctccccctccc 3190
>emb|CR860757.1| Pongo pygmaeus mRNA; cDNA DKFZp459N086 (from clone DKFZp459N086) Length = 4721 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 98 gcctctgccgccgccgccgcc 78
>emb|CR847993.4| Human DNA sequence from clone DADB-349N3 on chromosome 6, complete sequence Length = 20924 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 45 tctcctccctcttcgtttccctccccatccccctccc 81 |||||||||||| | | ||||||||| |||||||||| Sbjct: 8522 tctcctccctctccctctccctccccctccccctccc 8486
>emb|BX927139.8| Human DNA sequence from clone DAMA-72F24 on chromosome 6, complete sequence Length = 135396 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 45 tctcctccctcttcgtttccctccccatccccctccc 81 |||||||||||| | | ||||||||| |||||||||| Sbjct: 59839 tctcctccctctccctctccctccccctccccctccc 59803
>emb|CR762477.4| Human DNA sequence from clone DAAP-319K1 on chromosome 6, complete sequence Length = 10270 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 45 tctcctccctcttcgtttccctccccatccccctccc 81 |||||||||||| | | ||||||||| |||||||||| Sbjct: 1105 tctcctccctctccctctccctccccctccccctccc 1069
>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065G12 Length = 165006 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 135355 gcctctgccgccgccgccgcc 135375
>gb|AC069078.5| Homo sapiens chromosome 10 clone RP11-492B17, complete sequence Length = 187669 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttccctccccatccccctccc 81 ||||||||||||||||||||| Sbjct: 148119 ttccctccccatccccctccc 148099
>gb|AC145871.4| Pan troglodytes BAC clone RP43-6N15 from chromosome 7, complete sequence Length = 230197 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 22461 gcctctgccgccgccgccgcc 22441
>dbj|AK141454.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530024H20 product:Warning: possibly chimeric clone, full insert sequence Length = 3738 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 cgtttccctccccatccccct 78 ||||||||||||||||||||| Sbjct: 736 cgtttccctccccatccccct 716
>gb|AF344425.1| Didelphis virginiana mannose-6-phosphate/insulin-like growth factor II receptor (m6p/igf2r) gene, promoter and exon 1 Length = 1460 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 1292 gcctctgccgccgccgccgcc 1312
>gb|AC097634.2| Homo sapiens chromosome 3 clone RP11-154H23, complete sequence Length = 193553 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 92717 gcctctgccgccgccgccgcc 92697
>gb|AF342813.1|AF342813 Didelphis virginiana mannose-6-phosphate/insulin-like growth factor II receptor (m6p/igf2r) mRNA, complete cds Length = 8916 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 25 gcctctgccgccgccgccgcc 45
>gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic sequence, complete sequence Length = 115393 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 ccgggcctctgccgccgccgccgcc 148 ||||||||||||||| ||||||||| Sbjct: 95429 ccgggcctctgccgctgccgccgcc 95405
>dbj|AK082580.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230066G05 product:nuclear respiratory factor 1, full insert sequence Length = 3586 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 28 gcctctgccgccgccgccgcc 8
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 ccgggcctctgccgccgccgccgcc 148 ||||||||| ||||||||||||||| Sbjct: 7167290 ccgggcctccgccgccgccgccgcc 7167266 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 153228 cctctgccgccgccgccgcc 153247
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 16435159 gcctctgccgccgccgccgcc 16435139 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 20137902 cctctgccgccgccgccgcc 20137883 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 cgccgccaagcgcgcgcccc 311 |||||||||||||||||||| Sbjct: 19376184 cgccgccaagcgcgcgcccc 19376203 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 10667174 gcctctgccgccgccgccgc 10667155
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 7536571 gcctctgccgccgccgccgcc 7536551 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 22501157 tgccgccgccgccgccccat 22501176 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 13407420 tgccgccgccgccgccccat 13407439
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 ccgggcctctgccgccgccgccgcc 148 ||||||||||||||| ||||||||| Sbjct: 34444737 ccgggcctctgccgctgccgccgcc 34444761 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 27788116 gcctctgccgccgccgccgcc 27788096 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ctgccgccgccgccgcccca 151 |||||||||||||||||||| Sbjct: 28110971 ctgccgccgccgccgcccca 28110990
>gb|AC021827.4|AC021827 Homo sapiens chromosome 8, clone RP11-383I9, complete sequence Length = 173025 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 ctctgccgccgccgccgcccc 150 ||||||||||||||||||||| Sbjct: 144256 ctctgccgccgccgccgcccc 144276
>gb|AC107308.7| Homo sapiens 12 BAC RP11-677M24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 98485 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttccctccccatccccctccc 81 ||||||||||||||||||||| Sbjct: 67348 ttccctccccatccccctccc 67328
>gb|AC138057.3| Homo sapiens chromosome 3 clone RP11-285B24, complete sequence Length = 185935 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttccctccccatccccctccc 81 ||||||||||||||||||||| Sbjct: 54921 ttccctccccatccccctccc 54941
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 117101 gcctctgccgccgccgccgcc 117121
>ref|XM_235656.3| PREDICTED: Rattus norvegicus similar to expressed sequence AI317237 (predicted) (LOC300231), mRNA Length = 4881 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 42 gcctctgccgccgccgccgcc 22
>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551C06 Length = 149829 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 114895 gcctctgccgccgccgccgcc 114915
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccatc 153 ||||||||||||||||||||| Sbjct: 121109 tgccgccgccgccgccccatc 121089
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 45 tctcctccctcttcgtttccctccccatccccctccc 81 |||||||||||| | | ||||||||| |||||||||| Sbjct: 873778 tctcctccctctccctctccctccccctccccctccc 873814
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 93755 gcctctgccgccgccgccgcc 93775
>dbj|AP005523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0488B06 Length = 154764 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 45815 gcctctgccgccgccgccgcc 45795
>dbj|AP005520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0426E02 Length = 166985 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 141011 gcctctgccgccgccgccgcc 140991
>dbj|AK120737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003I19, full insert sequence Length = 2281 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 ccgggcctctgccgccgccgccgcc 148 ||||||||| ||||||||||||||| Sbjct: 693 ccgggcctccgccgccgccgccgcc 669
>gb|AC007869.2|AC007869 Genomic Sequence for Homo sapiens Clone 431C18 From Chromosome 8 (locus D8S1741), complete sequence Length = 196905 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 ctctgccgccgccgccgcccc 150 ||||||||||||||||||||| Sbjct: 106154 ctctgccgccgccgccgcccc 106134
>dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0061L20 Length = 138926 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 114885 gcctctgccgccgccgccgcc 114865
>dbj|AK105980.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F11, full insert sequence Length = 2038 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 1005 gcctctgccgccgccgccgcc 985
>dbj|AK071904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063D05, full insert sequence Length = 1462 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 489 gcctctgccgccgccgccgcc 469
>dbj|AK070367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049F10, full insert sequence Length = 2935 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 2624 gcctctgccgccgccgccgcc 2604
>emb|CT010584.19| Mouse DNA sequence from clone RP23-383B20 on chromosome 16, complete sequence Length = 199010 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 146688 gcctctgccgccgccgccgcc 146668
>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0407H12 Length = 167754 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 41981 gcctctgccgccgccgccgcc 41961
>gb|AF101724.1|AF101724 Bos taurus oxytocin receptor mRNA, complete cds Length = 2270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 878 gcctctgccgccgccgccgcc 858
>gb|AF100633.1|AF100633 Bos taurus oxytocin receptor gene, promoter region and partial cds Length = 3905 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 3346 gcctctgccgccgccgccgcc 3326
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 ccgggcctctgccgccgccgccgcc 148 ||||||||| ||||||||||||||| Sbjct: 7167169 ccgggcctccgccgccgccgccgcc 7167145 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 153228 cctctgccgccgccgccgcc 153247
>emb|AL807774.10| Mouse DNA sequence from clone RP23-198L2 on chromosome 4, complete sequence Length = 67374 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 44004 gcctctgccgccgccgccgcc 44024
>emb|AL954160.5|CNS08CCY Oryza sativa chromosome 12, . BAC OSJNBb0078J08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121243 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 ccgggcctctgccgccgccgccgcc 148 ||||||||| ||||||||||||||| Sbjct: 88825 ccgggcctccgccgccgccgccgcc 88849
>emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb0106P21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141427 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 ccgggcctctgccgccgccgccgcc 148 ||||||||| ||||||||||||||| Sbjct: 23603 ccgggcctccgccgccgccgccgcc 23579
>gb|AC149869.2| Mus musculus BAC clone RP23-3E12 from 7, complete sequence Length = 195392 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 45 tctcctccctcttcgtttccctccccatccccctccc 81 |||||||||||| | | ||||||||| |||||||||| Sbjct: 119094 tctcctccctctccctctccctccccgtccccctccc 119058
>gb|AC134897.4| Mus musculus BAC clone RP23-459D9 from 6, complete sequence Length = 173574 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 35065 gcctctgccgccgccgccgcc 35085
>gb|AC153632.2| Mus musculus 6 BAC RP23-450O1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 182517 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcc 148 ||||||||||||||||||||| Sbjct: 121705 gcctctgccgccgccgccgcc 121725
>gb|L41044.1|HUMHMGIC01 Homo sapiens high-mobility group phosphoprotein (HMGI-C) gene, exons 1-3, complete cds Length = 16727 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttccctccccatccccctccc 81 ||||||||||||||||||||| Sbjct: 1272 ttccctccccatccccctccc 1252
>gb|U28750.1|HSHMGICG1 Human high-mobility group phosphoprotein isoform I-C (HMGIC) gene, exon 1 Length = 2701 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttccctccccatccccctccc 81 ||||||||||||||||||||| Sbjct: 586 ttccctccccatccccctccc 566
>dbj|AB023048.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, clone:53L9, complete sequence Length = 192650 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 45 tctcctccctcttcgtttccctccccatccccctccc 81 |||||||||||| | | ||||||||| |||||||||| Sbjct: 41452 tctcctccctctccctctccctccccctccccctccc 41488
>gb|AC102910.13| Mus musculus chromosome 15, clone RP24-280E23, complete sequence Length = 179719 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tccctccccatccccctccc 81 |||||||||||||||||||| Sbjct: 11474 tccctccccatccccctccc 11455
>gb|AC091775.10| Oryza sativa chromosome 3 BAC OSJNBa0004G17 genomic sequence, complete sequence Length = 139074 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ctgccgccgccgccgcccca 151 |||||||||||||||||||| Sbjct: 133460 ctgccgccgccgccgcccca 133441
>gb|AC113013.15| Mus musculus chromosome 7, clone RP23-174K7, complete sequence Length = 235823 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 115007 cctctgccgccgccgccgcc 114988
>ref|NM_017668.1| Homo sapiens nudE nuclear distribution gene E homolog 1 (A. nidulans) (NDE1), mRNA Length = 1997 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 5 gcctctgccgccgccgccgc 24
>ref|NM_025219.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 5 (DNAJC5), mRNA Length = 3286 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 26 cctctgccgccgccgccgcc 45
>ref|XM_482311.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1070 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 cgccgccaagcgcgcgcccc 311 |||||||||||||||||||| Sbjct: 474 cgccgccaagcgcgcgcccc 493
>ref|NM_001035303.1| Bos taurus nucleolar protein family A, member 1 (NOLA1), mRNA Length = 1150 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 376 cctctgccgccgccgccgcc 357
>gb|AY476736.1| Homo sapiens heparan sulfate 3-O-sulfotransferase-4 (HS3ST4) gene, promoter region and partial cds Length = 4045 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 2482 gcctctgccgccgccgccgc 2463
>ref|XM_550554.1| Oryza sativa (japonica cultivar-group), mRNA Length = 456 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 102 tgccgccgccgccgccccat 83
>ref|NM_188749.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 300 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 62 cctctgccgccgccgccgcc 43
>ref|XM_530374.1| PREDICTED: Pan troglodytes LOC458769 (LOC458769), mRNA Length = 678 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ctctgccgccgccgccgccc 149 |||||||||||||||||||| Sbjct: 606 ctctgccgccgccgccgccc 587
>ref|XM_482446.1| Oryza sativa (japonica cultivar-group), mRNA Length = 570 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 521 cctctgccgccgccgccgcc 502
>ref|XM_468001.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2309 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 233 gcctctgccgccgccgccgc 214
>ref|XM_465273.1| Oryza sativa (japonica cultivar-group), mRNA Length = 369 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcccca 151 ||||| |||||||||||||||||| Sbjct: 257 gcctccgccgccgccgccgcccca 234
>ref|NM_197425.1| Oryza sativa (japonica cultivar-group) putative reverse transcriptase (OSJNBa0096G08.13), mRNA Length = 1692 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 373 cctctgccgccgccgccgcc 392
>ref|NM_196699.1| Oryza sativa (japonica cultivar-group) putative gag-pol polyprotein (OSJNBa0046P18.8), mRNA Length = 2799 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 477 gcctctgccgccgccgccgc 458
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 ctcgtgcacgacgacttgccgtgc 430 ||||||||||||||| |||||||| Sbjct: 2536298 ctcgtgcacgacgacatgccgtgc 2536275
>ref|NM_183692.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 525 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gccgccgccgccgccccatc 153 |||||||||||||||||||| Sbjct: 386 gccgccgccgccgccccatc 405
>ref|NM_190032.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1182 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gccgccgccgccgccccatc 153 |||||||||||||||||||| Sbjct: 44 gccgccgccgccgccccatc 25
>ref|XM_469453.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2912 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ctgccgccgccgccgcccca 151 |||||||||||||||||||| Sbjct: 278 ctgccgccgccgccgcccca 297
>ref|NM_014323.2| Homo sapiens zinc finger protein 278 (ZNF278), transcript variant 1, mRNA Length = 3812 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ctctgccgccgccgccgccc 149 |||||||||||||||||||| Sbjct: 8 ctctgccgccgccgccgccc 27
>ref|NM_032050.1| Homo sapiens zinc finger protein 278 (ZNF278), transcript variant 2, mRNA Length = 3674 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ctctgccgccgccgccgccc 149 |||||||||||||||||||| Sbjct: 8 ctctgccgccgccgccgccc 27
>ref|NM_032051.1| Homo sapiens zinc finger protein 278 (ZNF278), transcript variant 4, mRNA Length = 3021 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ctctgccgccgccgccgccc 149 |||||||||||||||||||| Sbjct: 8 ctctgccgccgccgccgccc 27
>ref|NM_032052.1| Homo sapiens zinc finger protein 278 (ZNF278), transcript variant 3, mRNA Length = 3747 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ctctgccgccgccgccgccc 149 |||||||||||||||||||| Sbjct: 8 ctctgccgccgccgccgccc 27
>ref|XM_472663.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1248 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 382 gcctctgccgccgccgccgc 363
>ref|XM_472328.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1629 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgcccca 151 ||||| |||||||||||||||||| Sbjct: 221 gcctccgccgccgccgccgcccca 198
>gb|BT021549.1| Bos taurus nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs) (NOLA1), mRNA, complete cds Length = 1150 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 376 cctctgccgccgccgccgcc 357
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08 map E1363S, complete sequence Length = 140681 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 80586 cctctgccgccgccgccgcc 80567
>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0013J21, complete sequence Length = 155290 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 153760 cctctgccgccgccgccgcc 153779
>gb|AC121297.20| Mus musculus chromosome 1, clone RP23-326H11, complete sequence Length = 207496 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 2097 cctctgccgccgccgccgcc 2078
>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0015A05, complete sequence Length = 127330 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 103121 cctctgccgccgccgccgcc 103140
>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22, complete sequence Length = 173903 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 64755 cctctgccgccgccgccgcc 64774
>ref|XM_591200.2| PREDICTED: Bos taurus similar to thioredoxin domain containing 11, transcript variant 1 (LOC513509), mRNA Length = 4432 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ttccctccccatccccctcc 80 |||||||||||||||||||| Sbjct: 2758 ttccctccccatccccctcc 2777
>ref|XM_872090.1| PREDICTED: Bos taurus similar to thioredoxin domain containing 11, transcript variant 3 (LOC513509), mRNA Length = 3519 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ttccctccccatccccctcc 80 |||||||||||||||||||| Sbjct: 1845 ttccctccccatccccctcc 1864
>ref|XM_365668.1| Magnaporthe grisea 70-15 hypothetical protein (MG02370.4) partial mRNA Length = 972 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ggcctctgccgccgccgccg 146 |||||||||||||||||||| Sbjct: 363 ggcctctgccgccgccgccg 382
>gb|AC101921.8| Mus musculus chromosome 15, clone RP24-176G17, complete sequence Length = 166654 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tccctccccatccccctccc 81 |||||||||||||||||||| Sbjct: 28232 tccctccccatccccctccc 28251
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 35709 cctctgccgccgccgccgcc 35690
>gb|BC007179.1| Mus musculus ubiquitin-associated protein 2, mRNA (cDNA clone MGC:7679 IMAGE:3496608), complete cds Length = 4384 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 5 gcctctgccgccgccgccgc 24
>gb|BC053642.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 5, mRNA (cDNA clone MGC:61683 IMAGE:5215195), complete cds Length = 3286 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 26 cctctgccgccgccgccgcc 45
>gb|BC001421.2| Homo sapiens nudE nuclear distribution gene E homolog 1 (A. nidulans), mRNA (cDNA clone MGC:1075 IMAGE:3140369), complete cds Length = 2014 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 19 gcctctgccgccgccgccgc 38
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 catgcgccacgccgtcctcccggg 276 |||||||||||||||| ||||||| Sbjct: 2236905 catgcgccacgccgtcttcccggg 2236928
>ref|XM_865395.1| PREDICTED: Bos taurus similar to Zinc finger protein 364 (Rabring 7) (LOC614061), mRNA Length = 1542 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 697 cctctgccgccgccgccgcc 678
>ref|NM_012014.2| Mus musculus G protein-regulated inducer of neurite outgrowth 1 (Gprin1), mRNA Length = 4143 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 ggagggcgccgccaagcgcgcgcc 309 ||||||||||||||||||| |||| Sbjct: 3055 ggagggcgccgccaagcgcccgcc 3078
>gb|AC158619.12| Mus musculus 10 BAC RP23-291O3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250421 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 42 ctctctcctccctcttcgtttccctccccatccccctccc 81 ||||||||||||||| | | |||||||| |||||||||| Sbjct: 230949 ctctctcctccctctccctccccctccccctccccctccc 230910
>ref|NM_178395.2| Mus musculus zinc finger, DHHC domain containing 2 (Zdhhc2), mRNA Length = 2499 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ctctgccgccgccgccgccc 149 |||||||||||||||||||| Sbjct: 204 ctctgccgccgccgccgccc 185
>ref|NM_026872.1| Mus musculus ubiquitin-associated protein 2 (Ubap2), mRNA Length = 4384 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 5 gcctctgccgccgccgccgc 24
>ref|NM_006040.1| Homo sapiens heparan sulfate (glucosamine) 3-O-sulfotransferase 4 (HS3ST4), mRNA Length = 3201 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 26 gcctctgccgccgccgccgc 7
>gb|AF105378.2| Homo sapiens heparan sulfate 3-O-sulfotransferase-4 (HS3ST4) mRNA, complete cds Length = 3201 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 26 gcctctgccgccgccgccgc 7
>gb|AC099594.6| Mus musculus chromosome 15, clone RP23-458G7, complete sequence Length = 220242 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tccctccccatccccctccc 81 |||||||||||||||||||| Sbjct: 139516 tccctccccatccccctccc 139535
>gb|BC016462.1| Mus musculus nuclear receptor subfamily 3, group C, member 1, mRNA (cDNA clone IMAGE:4036433), containing frame-shift errors Length = 1638 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ctgccgccgccgccgcccca 151 |||||||||||||||||||| Sbjct: 28 ctgccgccgccgccgcccca 9
>ref|XM_001000610.1| PREDICTED: Mus musculus G protein-regulated inducer of neurite outgrowth 1 (Gprin1), mRNA Length = 2890 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 ggagggcgccgccaagcgcgcgcc 309 ||||||||||||||||||| |||| Sbjct: 2791 ggagggcgccgccaagcgcccgcc 2814
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ctgccgccgccgccgcccca 151 |||||||||||||||||||| Sbjct: 5379 ctgccgccgccgccgcccca 5360
>gb|AC118012.9| Mus musculus chromosome 8, clone RP23-454D11, complete sequence Length = 192971 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ctctgccgccgccgccgccc 149 |||||||||||||||||||| Sbjct: 81246 ctctgccgccgccgccgccc 81227
>ref|XM_384674.1| Gibberella zeae PH-1 chromosome 2 predicted protein (FG04498.1) partial mRNA Length = 474 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 tctgccgccgccgccgccccatct 154 |||||||||||||||||| ||||| Sbjct: 331 tctgccgccgccgccgccacatct 354
>gb|AC124494.4| Mus musculus BAC clone RP23-464P12 from chromosome 13, complete sequence Length = 204177 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 ctctctcctccctcttcgtttccc 65 ||||||||||||||||| |||||| Sbjct: 57743 ctctctcctccctcttcctttccc 57766
>gb|AC129919.9| Homo sapiens chromosome 17, clone RP13-1277B16, complete sequence Length = 182735 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tccctccccatccccctccc 81 |||||||||||||||||||| Sbjct: 148273 tccctccccatccccctccc 148254
>gb|AC114684.10| Homo sapiens chromosome 18, clone RP11-1058N17, complete sequence Length = 196117 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 21809 cctctgccgccgccgccgcc 21828
>gb|AC121592.3| Mus musculus BAC clone RP23-292K4 from 8, complete sequence Length = 186807 Score = 40.1 bits (20), Expect = 5.8 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 43 tctctcctccctctt-cgtttccctccccatccccc 77 ||||||||| ||||| | |||||||||||||||||| Sbjct: 113518 tctctcctctctctttcttttccctccccatccccc 113483
>gb|BC057044.1| Mus musculus G protein-regulated inducer of neurite outgrowth 1, mRNA (cDNA clone MGC:67281 IMAGE:6825304), complete cds Length = 4049 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 ggagggcgccgccaagcgcgcgcc 309 ||||||||||||||||||| |||| Sbjct: 2941 ggagggcgccgccaagcgcccgcc 2964
>gb|AC115099.6| Homo sapiens chromosome 17, clone RP11-149I9, complete sequence Length = 161156 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tccctccccatccccctccc 81 |||||||||||||||||||| Sbjct: 137497 tccctccccatccccctccc 137478
>gb|BC109972.1| Bos taurus similar to polymerase (RNA) III (DNA directed) polypeptide C (62kD), mRNA (cDNA clone MGC:133926 IMAGE:8047141), complete cds Length = 2199 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 76 cctctgccgccgccgccgcc 95
>gb|BC028609.1| Homo sapiens coiled-coil domain containing 93, mRNA (cDNA clone MGC:33252 IMAGE:4826022), complete cds Length = 2802 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 35 cctctgccgccgccgccgcc 16
>emb|AL358175.18| Human DNA sequence from clone RP11-343N15 on chromosome 1 Contains two novel genes, the gene for a novel protein similar to formin binding protein 2 (FNBP2), the 5' end of a novel gene and a CpG island, complete sequence Length = 95747 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tccctccccatccccctccc 81 |||||||||||||||||||| Sbjct: 21983 tccctccccatccccctccc 22002
>gb|AC105515.5| Rattus norvegicus 14 BAC CH230-13H11 (Children's Hospital Oakland Research Institute) complete sequence Length = 221805 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 76 cctcccgaagctgccatccacctccaaa 103 |||||| |||| |||||||||||||||| Sbjct: 113799 cctccctaagcagccatccacctccaaa 113772
>emb|AL118506.27|HSJ591C20 Human DNA sequence from clone RP4-591C20 on chromosome 20 Contains the C20orf135 gene for chromosome 20 open reading frame 135, the TPD52L2 gene for tumor protein D52-like protein 2, the DNAJC5 gene for member 5 of DnaJ (Hsp40) homolog subfamily C, the URKL1 gene for uridine kinase-like 1, the gene for a novel protein (KIAA1196), the C20orf136 gene for chromosome 20 open reading frame 136, the 5' end of the C20orf14 gene for chromosome 20 open reading frame 14 and twelve CpG islands, complete sequence Length = 139505 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 36138 cctctgccgccgccgccgcc 36157
>gb|AC112216.3| Homo sapiens chromosome 3 clone CTD-2021F6, complete sequence Length = 150140 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 21892 cctctgccgccgccgccgcc 21911
>gb|AC116036.3| Homo sapiens chromosome 3 clone RP11-359I18, complete sequence Length = 178119 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 104921 cctctgccgccgccgccgcc 104940
>gb|BT009325.1| Triticum aestivum clone wlm24.pk0016.c6:fis, full insert mRNA sequence Length = 864 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 cgacgacttgccgtgctttg 434 |||||||||||||||||||| Sbjct: 1 cgacgacttgccgtgctttg 20
>gb|BC051357.1| Homo sapiens zinc finger protein 278, mRNA (cDNA clone IMAGE:6598836), partial cds Length = 3691 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ctctgccgccgccgccgccc 149 |||||||||||||||||||| Sbjct: 100 ctctgccgccgccgccgccc 119
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 2175620 cctctgccgccgccgccgcc 2175639
>gb|AC104322.4| Oryza sativa chromosome 10 BAC OSJNBb0005F01 genomic sequence, complete sequence Length = 151428 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 146859 tgccgccgccgccgccccat 146878
>gb|AC105377.12| Oryza sativa chromosome 10 BAC OSJNBa0034E15 genomic sequence, complete sequence Length = 100285 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 9012 tgccgccgccgccgccccat 9031
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 21570 gcctctgccgccgccgccgc 21589
>emb|AJ621492.3| Gallus gallus mRNA for corticotropin releasing hormone precursor (CRH gene) Length = 794 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ctgccgccgccgccgcccca 151 |||||||||||||||||||| Sbjct: 130 ctgccgccgccgccgcccca 149
>gb|DQ191744.1| Isochrysis galbana chloroplast clp protease P mRNA, complete cds; nuclear gene for chloroplast product Length = 907 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 ccctccccatccccctcccg 82 |||||||||||||||||||| Sbjct: 226 ccctccccatccccctcccg 245
>ref|NM_019044.3| Homo sapiens coiled-coil domain containing 93 (CCDC93), mRNA Length = 6794 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 20 cctctgccgccgccgccgcc 1
>emb|CR859090.1| Pongo pygmaeus mRNA; cDNA DKFZp459J2429 (from clone DKFZp459J2429) Length = 4530 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 82 cctctgccgccgccgccgcc 101
>emb|CR858235.1| Pongo pygmaeus mRNA; cDNA DKFZp469K0718 (from clone DKFZp469K0718) Length = 3991 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 143 gcctctgccgccgccgccgc 124
>gb|AC064801.10| Homo sapiens chromosome 18, clone RP11-120K19, complete sequence Length = 167843 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 91599 cctctgccgccgccgccgcc 91618
>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004G10 Length = 150379 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 6532 cctctgccgccgccgccgcc 6551
>gb|AC023715.4| Drosophila melanogaster X BAC RP98-17H6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160629 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 51362 cctctgccgccgccgccgcc 51381
>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20, complete sequence Length = 139421 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 107648 cctctgccgccgccgccgcc 107667
>emb|CR595822.1| full-length cDNA clone CS0DC021YA18 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1608 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 33 cctctgccgccgccgccgcc 52
>dbj|AK024338.1| Homo sapiens cDNA FLJ14276 fis, clone PLACE1005128 Length = 1871 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 72 gcctctgccgccgccgccgc 53
>ref|NM_001039505.1| Rattus norvegicus Iroquois related homeobox 2 (Drosophila) (Irx2), mRNA Length = 2633 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ctgccgccgccgccgcccca 151 |||||||||||||||||||| Sbjct: 95 ctgccgccgccgccgcccca 114
>gb|AC092548.10| Oryza sativa chromosome 10 BAC OSJNBa0073L01 genomic sequence, complete sequence Length = 179199 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ctgccgccgccgccgcccca 151 |||||||||||||||||||| Sbjct: 18544 ctgccgccgccgccgcccca 18563
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ccacaacgccatgcgccacg 263 |||||||||||||||||||| Sbjct: 3063405 ccacaacgccatgcgccacg 3063424
>ref|NM_080335.2| Drosophila melanogaster Protein phosphatase 2C CG2984-RA (Pp2C1), mRNA Length = 5231 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 4131 cctctgccgccgccgccgcc 4112
>dbj|AK138306.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230062C06 product:G protein-regulated inducer of neurite outgrowth 1, full insert sequence Length = 4143 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 ggagggcgccgccaagcgcgcgcc 309 ||||||||||||||||||| |||| Sbjct: 3055 ggagggcgccgccaagcgcccgcc 3078
>dbj|AK144210.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:G430115C11 product:G protein-regulated inducer of neurite outgrowth 1, full insert sequence Length = 4051 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 ggagggcgccgccaagcgcgcgcc 309 ||||||||||||||||||| |||| Sbjct: 2964 ggagggcgccgccaagcgcccgcc 2987
>gb|AC093814.3| Homo sapiens BAC clone RP11-362I16 from 4, complete sequence Length = 163201 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 124454 cctctgccgccgccgccgcc 124473
>dbj|AK136296.1| Mus musculus 11 days embryo wolffian duct and mullerian duct cDNA, RIKEN full-length enriched library, clone:7930401O20 product:zinc finger, DHHC domain containing 2, full insert sequence Length = 1979 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ctctgccgccgccgccgccc 149 |||||||||||||||||||| Sbjct: 202 ctctgccgccgccgccgccc 183
>gb|AC074283.3| Oryza sativa chromosome 10 clone OSJNBa0087H07, complete sequence Length = 156654 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 1274 cctctgccgccgccgccgcc 1293
>gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222553 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 42 ctctctcctccctcttcgtttccctccccatccccctccc 81 ||||||||||||||| | | |||||||| |||||||||| Sbjct: 164669 ctctctcctccctctccctccccctccccctccccctccc 164708
>gb|AC008569.7| Homo sapiens chromosome 19 clone CTC-548K16, complete sequence Length = 227245 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tccctccccatccccctccc 81 |||||||||||||||||||| Sbjct: 123867 tccctccccatccccctccc 123848
>gb|AC026401.7| Homo sapiens chromosome 16 clone CTB-193M12, complete sequence Length = 201456 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 58403 gcctctgccgccgccgccgc 58384
>dbj|AK046533.1| Mus musculus adult male adrenal gland cDNA, RIKEN full-length enriched library, clone:B330016H11 product:SMALL REC homolog [Rattus norvegicus], full insert sequence Length = 3372 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ctctgccgccgccgccgccc 149 |||||||||||||||||||| Sbjct: 202 ctctgccgccgccgccgccc 183
>gb|BC050909.1| Mus musculus, zinc finger protein 238, clone IMAGE:6417039, mRNA, partial cds Length = 3881 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 139 cctctgccgccgccgccgcc 120
>dbj|AK088190.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430005M20 product:unclassifiable, full insert sequence Length = 1151 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tccctccccatccccctccc 81 |||||||||||||||||||| Sbjct: 875 tccctccccatccccctccc 856
>gb|AF107457.1|AF107457 Homo sapiens clone HB9 mRNA sequence Length = 2061 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 cgggcctctgccgccgccgccgcc 148 |||||| ||||||||||||||||| Sbjct: 545 cgggccgctgccgccgccgccgcc 568
>dbj|AK044652.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930029O05 product:SMALL REC homolog [Rattus norvegicus], full insert sequence Length = 2916 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ctctgccgccgccgccgccc 149 |||||||||||||||||||| Sbjct: 197 ctctgccgccgccgccgccc 178
>dbj|AK018284.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430583A19 product:SMALL REC homolog [Rattus norvegicus], full insert sequence Length = 1524 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ctctgccgccgccgccgccc 149 |||||||||||||||||||| Sbjct: 176 ctctgccgccgccgccgccc 157
>dbj|AK030662.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430408L04 product:SMALL REC homolog [Rattus norvegicus], full insert sequence Length = 2499 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ctctgccgccgccgccgccc 149 |||||||||||||||||||| Sbjct: 204 ctctgccgccgccgccgccc 185
>dbj|AK033309.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030490L12 product:weakly similar to XYLOSYLTRANSFERASE I (EC 2.4.2.26) (FRAGMENT) [Rattus norvegicus], full insert sequence Length = 2140 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 49 cctctgccgccgccgccgcc 30
>dbj|AK017384.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430433B02 product:hypothetical BTB/POZ domain/K+ channel tetramerisation domain containing protein, full insert sequence Length = 1638 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 67 cctctgccgccgccgccgcc 86
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 32030447 cctctgccgccgccgccgcc 32030428 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 22417815 gcctctgccgccgccgccgc 22417834 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcccca 151 ||||| |||||||||||||||||| Sbjct: 19512947 gcctccgccgccgccgccgcccca 19512970 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 gccgcgatgccaatccgtccgccg 235 ||||||| |||||||||||||||| Sbjct: 18738916 gccgcgacgccaatccgtccgccg 18738893 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 2133713 tgccgccgccgccgccccat 2133694 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 2125200 tgccgccgccgccgccccat 2125181
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 19819548 cctctgccgccgccgccgcc 19819529 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 15350515 gcctctgccgccgccgccgc 15350496 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 14927870 cctctgccgccgccgccgcc 14927889 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ctgccgccgccgccgcccca 151 |||||||||||||||||||| Sbjct: 10687776 ctgccgccgccgccgcccca 10687795 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 6211454 tgccgccgccgccgccccat 6211473 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 2175620 cctctgccgccgccgccgcc 2175639
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 2618235 cctctgccgccgccgccgcc 2618254
>emb|AL731602.3|OSJN00251 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0059H15, complete sequence Length = 149181 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 48341 tgccgccgccgccgccccat 48322 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 39828 tgccgccgccgccgccccat 39809
>emb|AL662997.3|OSJN00205 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039F02, complete sequence Length = 122499 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gcctctgccgccgccgccgcccca 151 ||||| |||||||||||||||||| Sbjct: 33594 gcctccgccgccgccgccgcccca 33617
>emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D21, complete sequence Length = 160456 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 gccgcgatgccaatccgtccgccg 235 ||||||| |||||||||||||||| Sbjct: 88054 gccgcgacgccaatccgtccgccg 88031
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 67878 gcctctgccgccgccgccgc 67859
>gb|AC092141.4| Homo sapiens chromosome 16 clone RP11-478K1, complete sequence Length = 98984 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcctctgccgccgccgccgc 147 |||||||||||||||||||| Sbjct: 38176 gcctctgccgccgccgccgc 38157
>gb|AC007002.3| Homo sapiens BAC clone RP11-493L16 from 2, complete sequence Length = 140331 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gccgccgccgccgccccatc 153 |||||||||||||||||||| Sbjct: 122080 gccgccgccgccgccccatc 122061
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 116453 tgccgccgccgccgccccat 116472 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 107935 tgccgccgccgccgccccat 107954
>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E07 Length = 176486 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 80026 tgccgccgccgccgccccat 80007 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 71563 tgccgccgccgccgccccat 71544
>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506E04 Length = 139934 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gccgccgccgccgccccatc 153 |||||||||||||||||||| Sbjct: 119972 gccgccgccgccgccccatc 119953
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gccgccgccgccgccccatc 153 |||||||||||||||||||| Sbjct: 36291 gccgccgccgccgccccatc 36272
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gccgccgccgccgccccatc 153 |||||||||||||||||||| Sbjct: 108847 gccgccgccgccgccccatc 108866
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 gtcgagggcgagctcgatgc 213 |||||||||||||||||||| Sbjct: 1838662 gtcgagggcgagctcgatgc 1838681
>gb|AC009303.3| Homo sapiens BAC clone RP11-98C1 from 2, complete sequence Length = 198652 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 83792 cctctgccgccgccgccgcc 83811
>gb|AC005046.3|AC005046 Homo sapiens BAC clone CTB-13F3 from 7q22, complete sequence Length = 219436 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 48 cctccctcttcgtttccctccccatccccctc 79 ||||||||| | ||||||||||| |||||||| Sbjct: 65286 cctccctctccctttccctccccctccccctc 65317
>gb|AY069593.1| Drosophila melanogaster LD34192 full insert cDNA Length = 5259 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 4132 cctctgccgccgccgccgcc 4113
>gb|AC090669.9| Homo sapiens 12 BAC RP11-780K2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 113027 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tccctccccatccccctccc 81 |||||||||||||||||||| Sbjct: 33703 tccctccccatccccctccc 33722 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tccctccccatccccctccc 81 |||||||||||||||||||| Sbjct: 33674 tccctccccatccccctccc 33693
>dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0047E11 Length = 148109 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 43702 tgccgccgccgccgccccat 43683 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 35267 tgccgccgccgccgccccat 35248
>dbj|AP003254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0454A11 Length = 152240 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 111967 tgccgccgccgccgccccat 111948 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgccgccgccgccgccccat 152 |||||||||||||||||||| Sbjct: 103532 tgccgccgccgccgccccat 103513
>dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1008C01 Length = 144141 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cctctgccgccgccgccgcc 148 |||||||||||||||||||| Sbjct: 116193 cctctgccgccgccgccgcc 116212 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,186,882 Number of Sequences: 3902068 Number of extensions: 3186882 Number of successful extensions: 249907 Number of sequences better than 10.0: 321 Number of HSP's better than 10.0 without gapping: 349 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 227679 Number of HSP's gapped (non-prelim): 21933 length of query: 434 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 412 effective length of database: 17,147,199,772 effective search space: 7064646306064 effective search space used: 7064646306064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)