>dbj|AB032798.1| Gallus gallus genes for ribosomal protein S11 and U35 small
           nucleolar RNAs, complete cds and complete sequences
          Length = 3298

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 10  ccgccggcctcctcgccaccgcggcctcc 38
           |||| |||||||||| |||||||||||||
Sbjct: 248 ccgcgggcctcctcgacaccgcggcctcc 220

>ref|XM_466803.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1545

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 2   cctcgcgtccgccggcctcctcgc 25
           ||||||||||||| ||||||||||
Sbjct: 127 cctcgcgtccgcctgcctcctcgc 150

>ref|XM_414205.1| PREDICTED: Gallus gallus similar to ankyrin repeat domain 11;
            nasopharyngeal carcinoma susceptibility protein; ankyrin
            repeat-containing protein 11 (LOC415845), mRNA
          Length = 9564

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   gacaaggaggggaaggtggt 70
            ||||||||||||||||||||
Sbjct: 3202 gacaaggaggggaaggtggt 3221

>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete
              sequence
          Length = 138345

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     ccgccggcctcctcgccacc 29
              ||||||||||||||||||||
Sbjct: 131568 ccgccggcctcctcgccacc 131587

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 10       ccgccggcctcctcgccacc 29
                ||||||||||||||||||||
Sbjct: 27431361 ccgccggcctcctcgccacc 27431380

>gb|AF143772.2| Mycobacterium avium strain 2151 glycopeptidolipid biosynthesis and
             daunorubicin resistance gene clusters and insertion
             sequences IS1601, IS1245 and IS1348, complete sequence
          Length = 71286

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    ggggaaggtggtgaccaacg 78
             ||||||||||||||||||||
Sbjct: 39854 ggggaaggtggtgaccaacg 39835

>emb|CR387074.1| Gallus gallus finished cDNA, clone ChEST120l1
          Length = 906

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 51  gacaaggaggggaaggtggt 70
           ||||||||||||||||||||
Sbjct: 236 gacaaggaggggaaggtggt 255

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 11       cgccggcctcctcgccaccg 30
                ||||||||||||||||||||
Sbjct: 30224148 cgccggcctcctcgccaccg 30224167

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 10       ccgccggcctcctcgccacc 29
                ||||||||||||||||||||
Sbjct: 27522684 ccgccggcctcctcgccacc 27522703

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 2        cctcgcgtccgccggcctcctcgc 25
                ||||||||||||| ||||||||||
Sbjct: 24752381 cctcgcgtccgcctgcctcctcgc 24752358

>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete
              sequence
          Length = 123406

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     ccgccggcctcctcgccacc 29
              ||||||||||||||||||||
Sbjct: 119153 ccgccggcctcctcgccacc 119134

>dbj|AP007231.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0535F09
          Length = 175050

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    cgccggcctcctcgccaccg 30
             ||||||||||||||||||||
Sbjct: 90483 cgccggcctcctcgccaccg 90502

>dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1234_B11
          Length = 128095

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 2     cctcgcgtccgccggcctcctcgc 25
             ||||||||||||| ||||||||||
Sbjct: 52029 cctcgcgtccgcctgcctcctcgc 52006

>dbj|AK120798.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012G01, full
           insert sequence
          Length = 1604

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 2   cctcgcgtccgccggcctcctcgc 25
           ||||||||||||| ||||||||||
Sbjct: 127 cctcgcgtccgcctgcctcctcgc 150

>dbj|AK101515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046F12,
          full insert sequence
          Length = 2211

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 9  tccgccggcctcctcgccaccgcg 32
          ||||||| ||||||||||||||||
Sbjct: 71 tccgccgccctcctcgccaccgcg 94

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 59      ggggaaggtggtgaccaacg 78
               ||||||||||||||||||||
Sbjct: 1305075 ggggaaggtggtgaccaacg 1305056

>ref|XM_480091.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 474

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 17  cctcctcgccaccgcggcc 35
           |||||||||||||||||||
Sbjct: 160 cctcctcgccaccgcggcc 142

>ref|XM_504412.1| Yarrowia lipolytica CLIB122, YALI0E26125g predicted mRNA
          Length = 699

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 12 gccggcctcctcgccaccgcggcctcc 38
          |||| ||||||||||||||| ||||||
Sbjct: 13 gccgtcctcctcgccaccgccgcctcc 39

>gb|AY442269.2| Aeromonas hydrophila PPD134/91 cryptic prophage tmRNA (ssrA) gene,
             complete sequence; putative transposase B, probable
             transposase, putative phage nin-region protein, putative
             phage protein, replication protein, repressor homolog,
             transcriptional protein, exodeoxyribonuclease VIII, and
             conserved hypothetical protein genes, complete cds; and
             unknown genes
          Length = 23409

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     cctcgcgtccgccggcctc 20
             |||||||||||||||||||
Sbjct: 20384 cctcgcgtccgccggcctc 20366

>gb|AC111120.12| Mus musculus chromosome 7, clone RP23-225M4, complete sequence
          Length = 151727

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 55    aggaggggaaggtggtgac 73
             |||||||||||||||||||
Sbjct: 78869 aggaggggaaggtggtgac 78887

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 17      cctcctcgccaccgcggcc 35
               |||||||||||||||||||
Sbjct: 2688076 cctcctcgccaccgcggcc 2688058

>dbj|AP005741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0470H09
          Length = 141257

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    cctcctcgccaccgcggcc 35
             |||||||||||||||||||
Sbjct: 66357 cctcctcgccaccgcggcc 66339

>gb|AY112429.1| Zea mays CL31479_3 mRNA sequence
          Length = 587

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 53  caaggaggggaaggtggtg 71
           |||||||||||||||||||
Sbjct: 248 caaggaggggaaggtggtg 230

>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 12      gccggcctcctcgccaccgcggcctcc 38
               |||| ||||||||||||||| ||||||
Sbjct: 3103995 gccgtcctcctcgccaccgccgcctcc 3104021

>emb|AL844221.6| Mouse DNA sequence from clone RP23-445C3 on chromosome X, complete
             sequence
          Length = 188627

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 48    catgacaaggaggggaagg 66
             |||||||||||||||||||
Sbjct: 12386 catgacaaggaggggaagg 12404


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 758,883
Number of Sequences: 3902068
Number of extensions: 758883
Number of successful extensions: 63466
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63057
Number of HSP's gapped (non-prelim): 409
length of query: 112
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 91
effective length of database: 17,151,101,840
effective search space: 1560750267440
effective search space used: 1560750267440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)