ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast59h07 |
|---|---|
| Clone Library Name | barley_pub |
>PSB5B_ARATH (Q9LIP2) Proteasome subunit beta type 5-B precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-2) (Proteasome epsilon-2 chain) Length = 273 Score = 75.1 bits (183), Expect = 4e-14 Identities = 37/55 (67%), Positives = 42/55 (76%) Frame = +3 Query: 198 ALEFPTCDDFDGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 + + P DFDGFQK MV KGTTTL+FIF +GV+VAADSRASMGGYISSQ Sbjct: 32 SFDLPRTTDFDGFQKKAVEMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQ 86
>PSB5A_ARATH (O23717) Proteasome subunit beta type 5-A precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-1) (Proteasome epsilon-1 chain) (Proteasome component E) Length = 274 Score = 74.7 bits (182), Expect = 5e-14 Identities = 36/55 (65%), Positives = 43/55 (78%) Frame = +3 Query: 198 ALEFPTCDDFDGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 + + P +FDGFQK K M+ + KGTTTL+FIF GV+VAADSRASMGGYISSQ Sbjct: 32 SFDLPRTKEFDGFQKKAKDMLKHAKGTTTLAFIFKGGVMVAADSRASMGGYISSQ 86
>PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (20S proteasome subunit E) (Proteasome epsilon chain) Length = 272 Score = 73.9 bits (180), Expect = 9e-14 Identities = 37/55 (67%), Positives = 41/55 (74%) Frame = +3 Query: 198 ALEFPTCDDFDGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 + + P DFDGFQK MV KGTTTL+FIF GV+VAADSRASMGGYISSQ Sbjct: 30 SFDLPNPTDFDGFQKEAVQMVKPAKGTTTLAFIFKHGVMVAADSRASMGGYISSQ 84
>PSB5_RAT (P28075) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) Length = 208 Score = 44.7 bits (104), Expect = 6e-05 Identities = 22/30 (73%), Positives = 25/30 (83%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 GTTTL+F F GVIVAADSRA+ G YI+SQ Sbjct: 4 GTTTLAFKFQHGVIVAADSRATAGPYIASQ 33
>PSB5_HUMAN (P28074) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) (Proteasome subunit MB1) Length = 208 Score = 44.7 bits (104), Expect = 6e-05 Identities = 22/30 (73%), Positives = 25/30 (83%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 GTTTL+F F GVIVAADSRA+ G YI+SQ Sbjct: 4 GTTTLAFKFRHGVIVAADSRATAGAYIASQ 33
>PSB8_RAT (P28064) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 44.3 bits (103), Expect = 7e-05 Identities = 22/43 (51%), Positives = 27/43 (62%) Frame = +3 Query: 231 GFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISS 359 G + K + GTTTL+F F GVIVA DSRAS G YI++ Sbjct: 58 GDDQERKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIAT 100
>PSB8_CANFA (Q5W416) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 44.3 bits (103), Expect = 7e-05 Identities = 25/44 (56%), Positives = 30/44 (68%) Frame = +3 Query: 228 DGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISS 359 +G + K MV+ GTTTL+F F GVIVA DSRA+ G YISS Sbjct: 60 NGEKNIRKEMVH---GTTTLAFKFQHGVIVAVDSRATAGNYISS 100
>PSB5_MOUSE (O55234) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) Length = 209 Score = 43.9 bits (102), Expect = 1e-04 Identities = 22/30 (73%), Positives = 25/30 (83%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 GTTTL+F F GVIVAADSRA+ G YI+SQ Sbjct: 4 GTTTLAFKFLHGVIVAADSRATAGAYIASQ 33
>PSB8_MOUSE (P28063) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 43.5 bits (101), Expect = 1e-04 Identities = 22/43 (51%), Positives = 26/43 (60%) Frame = +3 Query: 231 GFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISS 359 G + + GTTTL+F F GVIVA DSRA+ G YISS Sbjct: 58 GGDQERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGSYISS 100
>PSB5_CHICK (P34065) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome chain 1) (Macropain chain 1) (Multicatalytic endopeptidase complex chain 1) (Proteasome subunit C1) (Fragment) Length = 256 Score = 42.7 bits (99), Expect = 2e-04 Identities = 20/30 (66%), Positives = 24/30 (80%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 GTTTL+F F GV+VA DSRA+ G YI+SQ Sbjct: 55 GTTTLAFKFAHGVVVAVDSRATAGSYIASQ 84
>PSB8_HUMAN (P28062) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 41.6 bits (96), Expect = 5e-04 Identities = 20/29 (68%), Positives = 22/29 (75%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMGGYISS 359 GTTTL+F F GVI A DSRAS G YIS+ Sbjct: 72 GTTTLAFKFQHGVIAAVDSRASAGSYISA 100
>PSB5_YEAST (P30656) Proteasome component PRE2 precursor (EC 3.4.25.1)| (Macropain subunit PRE2) (Proteinase YSCE subunit PRE2) (Multicatalytic endopeptidase complex subunit PRE2) Length = 287 Score = 40.8 bits (94), Expect = 8e-04 Identities = 18/30 (60%), Positives = 24/30 (80%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 GTTTL+F F G+IVA DSRA+ G +++SQ Sbjct: 75 GTTTLAFRFQGGIIVAVDSRATAGNWVASQ 104
>PSB5_SCHPO (P30655) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome component pts1) (Macropain subunit pts1) (Multicatalytic endopeptidase complex subunit pts1) Length = 272 Score = 38.9 bits (89), Expect = 0.003 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = +3 Query: 240 KATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 K ++ GTTTL+F + G++V DSRAS G I+SQ Sbjct: 50 KNKHCLIKMNHGTTTLAFRYQHGIVVCVDSRASAGPLIASQ 90
>PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 206 Score = 35.8 bits (81), Expect = 0.026 Identities = 15/28 (53%), Positives = 22/28 (78%) Frame = +3 Query: 270 KGTTTLSFIFDKGVIVAADSRASMGGYI 353 KGTTT+ + +GV++AAD+RAS+G I Sbjct: 9 KGTTTVGLVCKEGVVLAADTRASLGNII 36
>PSMB_ARCFU (Q9P996) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 213 Score = 35.8 bits (81), Expect = 0.026 Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 2/39 (5%) Frame = +3 Query: 252 AMVNNK--KGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 +M+ K KGTTT+ + GV++A + RA+MG +I+S+ Sbjct: 2 SMIEEKIYKGTTTVGLVCKDGVVMATEKRATMGNFIASK 40
>PSB7B_ARATH (Q7DLS1) Proteasome subunit beta type 7-B precursor (EC 3.4.25.1)| (Proteasome subunit beta type 2) (20S proteasome beta subunit B-2) (Proteasome component FC) Length = 274 Score = 34.7 bits (78), Expect = 0.059 Identities = 18/42 (42%), Positives = 25/42 (59%) Frame = +3 Query: 237 QKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 QK KA K GTT + IF GVI+ AD+RA+ G ++ + Sbjct: 27 QKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADK 68
>PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 224 Score = 34.7 bits (78), Expect = 0.059 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +3 Query: 270 KGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 KGTTT+ I D VI+A D RAS+G ++ + Sbjct: 5 KGTTTVGLICDDAVILATDKRASLGNLVADK 35
>PSB7A_ARATH (O23710) Proteasome subunit beta type 7-A precursor (EC 3.4.25.1)| (Proteasome subunit beta type 2) (20S proteasome beta subunit B-1) (Proteasome component FA) (Proteasome component FB) Length = 273 Score = 34.7 bits (78), Expect = 0.059 Identities = 18/42 (42%), Positives = 25/42 (59%) Frame = +3 Query: 237 QKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 QK KA K GTT + IF GVI+ AD+RA+ G ++ + Sbjct: 27 QKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADK 68
>PSB6_SCHPO (O43063) Probable proteasome subunit beta type 6 precursor (EC| 3.4.25.1) Length = 226 Score = 34.7 bits (78), Expect = 0.059 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = +3 Query: 267 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 + GTT + + GVI+AADSR +MG YI+++ Sbjct: 22 RMGTTITALRYKDGVILAADSRTTMGAYIANR 53
>PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 210 Score = 34.7 bits (78), Expect = 0.059 Identities = 16/38 (42%), Positives = 28/38 (73%), Gaps = 2/38 (5%) Frame = +3 Query: 255 MVNNK--KGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 M N+K KGTTT+ + G+++A++ RA+MG +I+S+ Sbjct: 1 MDNDKYLKGTTTVGVVCTDGIVLASEQRATMGHFIASK 38
>PSB6_HUMAN (P28072) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) Length = 239 Score = 34.3 bits (77), Expect = 0.077 Identities = 14/30 (46%), Positives = 22/30 (73%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 GTT ++ FD GV++ ADSR + G YI+++ Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANR 63
>PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 34.3 bits (77), Expect = 0.077 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +3 Query: 270 KGTTTLSFIFDKGVIVAADSRASMGGYI 353 KGTTT+ + GV++AAD RAS+G I Sbjct: 9 KGTTTVGIVCKDGVVLAADRRASLGNII 36
>PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 34.3 bits (77), Expect = 0.077 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = +3 Query: 270 KGTTTLSFIFDKGVIVAADSRASMGGYI 353 KGTTT+ + GV++AAD RAS+G + Sbjct: 9 KGTTTVGIVCSDGVVLAADRRASLGNIV 36
>PSB6_RAT (P28073) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) (Proteasome chain 5) Length = 238 Score = 34.3 bits (77), Expect = 0.077 Identities = 14/30 (46%), Positives = 22/30 (73%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 GTT ++ FD GV++ ADSR + G YI+++ Sbjct: 33 GTTIMAVQFDGGVVLGADSRTTTGSYIANR 62
>PSMB_SULSO (Q9UXF3) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 208 Score = 33.5 bits (75), Expect = 0.13 Identities = 15/31 (48%), Positives = 23/31 (74%) Frame = +3 Query: 270 KGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 KGTTT+ + GVI+AAD RAS G +++++ Sbjct: 13 KGTTTVGIRVNDGVILAADRRASAGFFVANK 43
>PSB6_MOUSE (Q60692) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) Length = 238 Score = 32.3 bits (72), Expect = 0.29 Identities = 13/30 (43%), Positives = 22/30 (73%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 GTT ++ F+ GV++ ADSR + G YI+++ Sbjct: 33 GTTIMAVQFNGGVVLGADSRTTTGSYIANR 62
>PSMB_METTH (O27270) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 210 Score = 32.0 bits (71), Expect = 0.38 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = +3 Query: 261 NNKKGTTTLSFIFDKGVIVAADSRASMGGYIS 356 N KGTTT+ GV+ A + RASMG I+ Sbjct: 5 NTLKGTTTVGITCKDGVVFATERRASMGNLIA 36
>PSB6_YEAST (P38624) Proteasome component PRE3 precursor (EC 3.4.25.1)| (Macropain subunit PRE3) (Proteinase YSCE subunit PRE3) (Multicatalytic endopeptidase complex subunit PRE3) Length = 215 Score = 31.6 bits (70), Expect = 0.50 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 GT+ ++ F GVI+ ADSR + G YI+++ Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANR 48
>PSB6_TOBAC (P93395) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) Length = 234 Score = 31.2 bits (69), Expect = 0.65 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 GTT + ++ GV++ ADSR S G Y++++ Sbjct: 13 GTTIIGVTYNGGVVLGADSRTSTGMYVANR 42
>PSB6_ARATH (Q8LD27) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome subunit beta type 1) (20S proteasome beta subunit A-1) (Proteasome component CD) Length = 233 Score = 31.2 bits (69), Expect = 0.65 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 GTT + ++ GV++ ADSR S G Y++++ Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANR 41
>PSB9_SALSA (Q9DD33) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Low molecular mass protein 2) Length = 217 Score = 30.8 bits (68), Expect = 0.85 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +3 Query: 267 KKGTTTLSFIFDKGVIVAADSRASMG 344 K GTT ++ FD GV++ +DSR S G Sbjct: 16 KTGTTIIAIEFDGGVVLGSDSRVSAG 41
>PSB9_ONCMY (Q9PT26) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Low molecular mass protein 2) Length = 217 Score = 30.8 bits (68), Expect = 0.85 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +3 Query: 267 KKGTTTLSFIFDKGVIVAADSRASMG 344 K GTT ++ FD GV++ +DSR S G Sbjct: 16 KTGTTIIAIEFDGGVVLGSDSRVSAG 41
>PSB9_RAT (P28077) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMGGYI 353 GTT ++ FD GV+V +DSR S G + Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAV 46
>PSB9_MUSDU (O35521) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMGGYI 353 GTT ++ FD GV+V +DSR S G + Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAV 46
>PSB4_YEAST (P30657) Proteasome component PRE4 (EC 3.4.25.1) (Macropain subunit| PRE4) (Proteinase YSCE subunit PRE4) (Multicatalytic endopeptidase complex subunit PRE4) Length = 266 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 4/37 (10%) Frame = +3 Query: 255 MVNNKK----GTTTLSFIFDKGVIVAADSRASMGGYI 353 MVN ++ GT+ +S +D GVI+AAD+ S G + Sbjct: 31 MVNTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLL 67
>PSB9_MUSSI (O35524) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMG 344 GTT ++ FD GV+V +DSR S G Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAG 43
>PSB9_MUSPL (O35523) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMG 344 GTT ++ FD GV+V +DSR S G Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAG 43
>PSB9_MUSMB (O35522) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMG 344 GTT ++ FD GV+V +DSR S G Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAG 43
>PSB9_MOUSE (P28076) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) (LMP-2d) Length = 219 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMG 344 GTT ++ FD GV+V +DSR S G Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAG 43
>PSB7_YEAST (P25043) Proteasome component PUP1 precursor (EC 3.4.25.1)| (Macropain subunit PUP1) (Proteinase YSCE subunit PUP1) (Multicatalytic endopeptidase complex subunit PUP1) Length = 261 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 7/53 (13%) Frame = +3 Query: 225 FDGFQKATKAMVNN-------KKGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 FD +Q+ N+ GTT + F+ GV++AAD+R++ G ++ + Sbjct: 6 FDNYQRNNFLAENSHTQPKATSTGTTIVGVKFNNGVVIAADTRSTQGPIVADK 58
>PSB7_RAT (Q9JHW0) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/45 (28%), Positives = 24/45 (53%) Frame = +3 Query: 228 DGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 D +K K K GTT ++ G+++ AD+RA+ G ++ + Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADK 72
>PSB7_MOUSE (P70195) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/45 (28%), Positives = 24/45 (53%) Frame = +3 Query: 228 DGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 D +K K K GTT ++ G+++ AD+RA+ G ++ + Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADK 72
>PSB9_ORYLA (Q8UW64) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Low molecular mass protein 2) Length = 217 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +3 Query: 267 KKGTTTLSFIFDKGVIVAADSRASMG 344 K GTT ++ F+ GV++ +DSR S G Sbjct: 16 KTGTTIIAIEFNGGVVLGSDSRVSAG 41
>PSB10_HUMAN (P40306) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)| (Proteasome MECl-1) (Macropain subunit MECl-1) (Multicatalytic endopeptidase complex subunit MECl-1) Length = 273 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +3 Query: 267 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 K GTT +F GVI+ AD+RA+ ++ + Sbjct: 37 KTGTTIAGLVFQDGVILGADTRATNDSVVADK 68
>PSB9_HUMAN (P28065) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMG 344 GTT ++ FD GV++ +DSR S G Sbjct: 20 GTTIMAVEFDGGVVMGSDSRVSAG 43
>PSB10_MOUSE (O35955) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)| (Proteasome MECl-1) (Macropain subunit MECl-1) (Multicatalytic endopeptidase complex subunit MECl-1) Length = 273 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +3 Query: 267 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 K GTT +F GVI+ AD+RA+ ++ + Sbjct: 37 KTGTTIAGLVFRDGVILGADTRATNDSVVADK 68
>HSLV_WOLPM (P61479) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 184 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%) Frame = +3 Query: 261 NNKK-GTTTLSFIFDKGVIVAADSRASMG 344 NNK GTT LS DK V+V D + S+G Sbjct: 6 NNKMYGTTILSIRKDKSVVVIGDGQVSLG 34
>PSB7_HUMAN (Q99436) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 27.7 bits (60), Expect = 7.2 Identities = 10/32 (31%), Positives = 20/32 (62%) Frame = +3 Query: 267 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQ 362 K GTT ++ G+++ AD+RA+ G ++ + Sbjct: 41 KTGTTIAGVVYKDGIVLGADTRATEGMVVADK 72
>CBPA_CLOCL (P38058) Cellulose-binding protein A precursor| Length = 1848 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +3 Query: 246 TKAMVNNKKGTTTLSFIFDKG 308 +KA + + GT TL F+FDKG Sbjct: 1574 SKAYLAKQTGTVTLEFVFDKG 1594
>NUOF_AQUAE (O66841) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 426 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Frame = -1 Query: 362 LRRYVAAHAGPGVGGDDDALVED-EGERGGP 273 L YVA AG + G++ AL+E EG+RG P Sbjct: 169 LEIYVARGAGAYICGEETALIESLEGKRGHP 199
>PSB4_XENLA (P28024) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome beta chain) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome chain 3) (Fragment) Length = 242 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +3 Query: 273 GTTTLSFIFDKGVIVAADSRASMG 344 GT+ L FD GVI+AAD S G Sbjct: 31 GTSVLGVKFDGGVIIAADMLGSYG 54
>VL2_HPV48 (Q80925) Minor capsid protein L2| Length = 502 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 7/34 (20%) Frame = -1 Query: 353 YVAAHAGPGVGGDD-------DALVEDEGERGGP 273 ++A AGPG+GG+D D + G GGP Sbjct: 122 FIAPDAGPGIGGEDIELFTFRDPATDVGGVSGGP 155 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.129 0.351 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,304,729 Number of Sequences: 219361 Number of extensions: 302547 Number of successful extensions: 815 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 804 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 815 length of database: 80,573,946 effective HSP length: 96 effective length of database: 59,515,290 effective search space used: 1428366960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
