>DR102_ARATH (Q05212) DNA-damage-repair/toleration protein DRT102|
          Length = 230

 Score = 52.4 bits (124), Expect = 4e-07
 Identities = 24/35 (68%), Positives = 27/35 (77%)
 Frame = +2

Query: 317 IFANKYPGVYATHCSSAADAVNTRSINACNVLALS 421
           +FANK+PGVYA  C S  DAVN RSI+ CNVLA S
Sbjct: 1   MFANKFPGVYAATCLSVEDAVNARSISNCNVLAFS 35

>CYSJ_NEIMB (Q9JS45) Sulfite reductase [NADPH] flavoprotein alpha-component (EC|
           1.8.1.2) (SIR-FP)
          Length = 604

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 80  AGSRRFKIFAAADGFGEPLKNAVVAHLRAHSSVADVVD 193
           AG RR  +  +  G GEP K AVV H   +   A  +D
Sbjct: 109 AGERRLLLVTSTQGEGEPPKEAVVLHKLLNGKKAPKLD 146

>UCKL1_MOUSE (Q91YL3) Uridine/cytidine kinase-like 1|
          Length = 548

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
 Frame = +2

Query: 14  CPSAPHPNLRSS-----TAGQPPMAASAGSRRFKIFAAADGFGEPLKNAVVAHLRAHS-S 175
           C S P P LR+S     TAG+PP     G++  + FA   G G       VA +   +  
Sbjct: 65  CKSEP-PLLRTSKRTIYTAGRPPWYNEHGTQSKEAFAIGLGGGSASGKTTVARMIIEALD 123

Query: 176 VADVVDLGVDKYY 214
           V  VV L +D +Y
Sbjct: 124 VPWVVLLSMDSFY 136

>UCKL1_HUMAN (Q9NWZ5) Uridine/cytidine kinase-like 1|
          Length = 548

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
 Frame = +2

Query: 14  CPSAPHPNLRSS-----TAGQPPMAASAGSRRFKIFAAADGFGEPLKNAVVAHLRAHS-S 175
           C S P P LR+S     TAG+PP     G++  + FA   G G       VA +   +  
Sbjct: 65  CKSEP-PLLRTSKRTIYTAGRPPWYNEHGTQSKEAFAIGLGGGSASGKTTVARMIIEALD 123

Query: 176 VADVVDLGVDKYY 214
           V  VV L +D +Y
Sbjct: 124 VPWVVLLSMDSFY 136

>NCX6_CAEEL (P34315) Putative sodium/calcium exchanger 6 precursor|
           (Na(+)/Ca(2+)-exchange protein 6)
          Length = 590

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +2

Query: 101 IFAAADGFGEPLKNAVVAHLRAHSSVADV 187
           + +AAD F  P  +++VAHLR   SVA V
Sbjct: 114 VSSAADDFFSPSISSIVAHLRISESVAGV 142

>NCX7_CAEEL (P34322) Putative sodium/calcium exchanger 7 precursor|
           (Na(+)/Ca(2+)-exchange protein 7)
          Length = 691

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +2

Query: 101 IFAAADGFGEPLKNAVVAHLRAHSSVADV 187
           + +AAD F  P  +++VAHLR   SVA V
Sbjct: 124 VSSAADDFFSPSISSIVAHLRISESVAGV 152

>TRPB_LACPL (Q88WI0) Tryptophan synthase beta chain (EC 4.2.1.20)|
          Length = 399

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 183 SATEEWARRCATTAFLSGS 127
           +A +EW RRC  TA++ GS
Sbjct: 175 AALQEWTRRCDDTAYIMGS 193

>Y1202_ZYMMO (Q5NN84) UPF0168 protein ZMO1202|
          Length = 156

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
 Frame = +1

Query: 16 PFCSASKSQIEHRRSTADG---RLRRQ 87
          PFCS   SQ++  R T DG   R RRQ
Sbjct: 4  PFCSCENSQVKDSRPTEDGTAIRRRRQ 30

>UBQL4_HUMAN (Q9NRR5) Ubiquilin-4 (Ataxin-1 ubiquitin-like-interacting protein|
           A1U)
          Length = 601

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +2

Query: 17  PSAPHPNLRSSTAGQPPMAASAGSRRFKIFAAADGFGEPLKNAVVAHLRAHSSVADVVDL 196
           P++P    + ST+G     A +GSRR      + G GE   +A  + L     +  +  L
Sbjct: 112 PASPATPAQPSTSGSASSDAGSGSRRSSGGGPSPGAGEGSPSATASILSGFGGILGLGSL 171

Query: 197 GV 202
           G+
Sbjct: 172 GL 173


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,545,502
Number of Sequences: 219361
Number of extensions: 556486
Number of successful extensions: 2621
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2613
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)