ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast59g07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MDR2_CRIGR (P21449) Multidrug resistance protein 2 (EC 3.6.3.44)... 32 0.87

>MDR2_CRIGR (P21449) Multidrug resistance protein 2 (EC 3.6.3.44)|
           (P-glycoprotein 2)
          Length = 1276

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = +1

Query: 217 EELGKEKLAGTVGFHERHVFLCYKGPE-EWPSRVEASESDHLPRLLAAAIKARKPNLKKS 393
           EEL KEK     G + R V +  +G E E  S  + S+SD +   L +  + + P+++KS
Sbjct: 612 EELMKEK-----GIYCRLVMMQTRGNEVELGSEADGSQSDTIASELTSE-EFKSPSVRKS 665

Query: 394 TKLTICEGQD 423
           T  +IC  QD
Sbjct: 666 TCRSICGSQD 675


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.134    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,316,495
Number of Sequences: 219361
Number of extensions: 441496
Number of successful extensions: 1334
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
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