| Clone Name | bast59g07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467558.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1454 Score = 208 bits (105), Expect = 1e-50 Identities = 201/233 (86%) Strand = Plus / Plus Query: 198 ggagttcgggttccagcgggaggagctcggcaaggagaagctcgcggggaccgtgggatt 257 |||||||||||||||||| | ||||||||| | ||||||||| || || || ||| || Sbjct: 213 ggagttcgggttccagcgcgcggagctcgggacggagaagctggccggcacggtgcagtt 272 Query: 258 ccacgagcgccacgtgttcctctgctacaagggccctgaggagtggccatcccgcgtcga 317 ||||||||||||||| ||||||||||||||||| || |||| |||||| |||| |||||| Sbjct: 273 ccacgagcgccacgtcttcctctgctacaaggggcccgaggtgtggccgtcccacgtcga 332 Query: 318 ggcctccgagtccgaccacctcccccgcctcctcgccgccgccatcaaggcccgcaagcc 377 |||| | ||||| |||| ||||||||||||||||||||||||||||||| ||| |||| | Sbjct: 333 ggccgcggagtctgaccgcctcccccgcctcctcgccgccgccatcaagacccacaagtc 392 Query: 378 caatctgaagaagagcaccaaactgaccatttgtgaaggacaagatggcactg 430 | ||||||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 393 ggacttgaagaagaaaaccaaattgaccatttgtgaaggagaagatggcactg 445 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 tcctcccccacgacggccttcgccggcgacgccctcct 134 ||||||||||| ||||| |||||||||||||||||| Sbjct: 106 tcctcccccaccgcggccgccgccggcgacgccctcct 143
>ref|XM_506948.1| PREDICTED Oryza sativa (japonica cultivar-group), P0685G12.41 mRNA Length = 1611 Score = 208 bits (105), Expect = 1e-50 Identities = 201/233 (86%) Strand = Plus / Plus Query: 198 ggagttcgggttccagcgggaggagctcggcaaggagaagctcgcggggaccgtgggatt 257 |||||||||||||||||| | ||||||||| | ||||||||| || || || ||| || Sbjct: 212 ggagttcgggttccagcgcgcggagctcgggacggagaagctggccggcacggtgcagtt 271 Query: 258 ccacgagcgccacgtgttcctctgctacaagggccctgaggagtggccatcccgcgtcga 317 ||||||||||||||| ||||||||||||||||| || |||| |||||| |||| |||||| Sbjct: 272 ccacgagcgccacgtcttcctctgctacaaggggcccgaggtgtggccgtcccacgtcga 331 Query: 318 ggcctccgagtccgaccacctcccccgcctcctcgccgccgccatcaaggcccgcaagcc 377 |||| | ||||| |||| ||||||||||||||||||||||||||||||| ||| |||| | Sbjct: 332 ggccgcggagtctgaccgcctcccccgcctcctcgccgccgccatcaagacccacaagtc 391 Query: 378 caatctgaagaagagcaccaaactgaccatttgtgaaggacaagatggcactg 430 | ||||||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 392 ggacttgaagaagaaaaccaaattgaccatttgtgaaggagaagatggcactg 444 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 tcctcccccacgacggccttcgccggcgacgccctcct 134 ||||||||||| ||||| |||||||||||||||||| Sbjct: 105 tcctcccccaccgcggccgccgccggcgacgccctcct 142
>dbj|AK104276.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-A01, full insert sequence Length = 1454 Score = 208 bits (105), Expect = 1e-50 Identities = 201/233 (86%) Strand = Plus / Plus Query: 198 ggagttcgggttccagcgggaggagctcggcaaggagaagctcgcggggaccgtgggatt 257 |||||||||||||||||| | ||||||||| | ||||||||| || || || ||| || Sbjct: 213 ggagttcgggttccagcgcgcggagctcgggacggagaagctggccggcacggtgcagtt 272 Query: 258 ccacgagcgccacgtgttcctctgctacaagggccctgaggagtggccatcccgcgtcga 317 ||||||||||||||| ||||||||||||||||| || |||| |||||| |||| |||||| Sbjct: 273 ccacgagcgccacgtcttcctctgctacaaggggcccgaggtgtggccgtcccacgtcga 332 Query: 318 ggcctccgagtccgaccacctcccccgcctcctcgccgccgccatcaaggcccgcaagcc 377 |||| | ||||| |||| ||||||||||||||||||||||||||||||| ||| |||| | Sbjct: 333 ggccgcggagtctgaccgcctcccccgcctcctcgccgccgccatcaagacccacaagtc 392 Query: 378 caatctgaagaagagcaccaaactgaccatttgtgaaggacaagatggcactg 430 | ||||||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 393 ggacttgaagaagaaaaccaaattgaccatttgtgaaggagaagatggcactg 445 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 tcctcccccacgacggccttcgccggcgacgccctcct 134 ||||||||||| ||||| |||||||||||||||||| Sbjct: 106 tcctcccccaccgcggccgccgccggcgacgccctcct 143
>dbj|AK071759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109C03, full insert sequence Length = 1611 Score = 200 bits (101), Expect = 3e-48 Identities = 200/233 (85%) Strand = Plus / Plus Query: 198 ggagttcgggttccagcgggaggagctcggcaaggagaagctcgcggggaccgtgggatt 257 |||||||||||||||||| | ||||||||| | ||||||||| || || || ||| || Sbjct: 212 ggagttcgggttccagcgcgcggagctcgggacggagaagctggccggcacggtgcagtt 271 Query: 258 ccacgagcgccacgtgttcctctgctacaagggccctgaggagtggccatcccgcgtcga 317 ||||||||||||||| ||||||||||||||||| || |||| |||||| |||| |||||| Sbjct: 272 ccacgagcgccacgtcttcctctgctacaaggggcccgaggtgtggccgtcccacgtcga 331 Query: 318 ggcctccgagtccgaccacctcccccgcctcctcgccgccgccatcaaggcccgcaagcc 377 |||| | ||||| |||| | ||||||||||||||||||||||||||||| ||| |||| | Sbjct: 332 ggccgcggagtctgaccgcatcccccgcctcctcgccgccgccatcaagacccacaagtc 391 Query: 378 caatctgaagaagagcaccaaactgaccatttgtgaaggacaagatggcactg 430 | ||||||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 392 ggacttgaagaagaaaaccaaattgaccatttgtgaaggagaagatggcactg 444 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 tcctcccccacgacggccttcgccggcgacgccctcct 134 ||||||||||| ||||| |||||||||||||||||| Sbjct: 105 tcctcccccaccgcggccgccgccggcgacgccctcct 142
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 170 bits (86), Expect = 2e-39 Identities = 155/178 (87%) Strand = Plus / Minus Query: 198 ggagttcgggttccagcgggaggagctcggcaaggagaagctcgcggggaccgtgggatt 257 |||||||||||||||||| | ||||||||| | ||||||||| || || || ||| || Sbjct: 30161733 ggagttcgggttccagcgcgcggagctcgggacggagaagctggccggcacggtgcagtt 30161674 Query: 258 ccacgagcgccacgtgttcctctgctacaagggccctgaggagtggccatcccgcgtcga 317 ||||||||||||||| ||||||||||||||||| || |||| |||||| |||| |||||| Sbjct: 30161673 ccacgagcgccacgtcttcctctgctacaaggggcccgaggtgtggccgtcccacgtcga 30161614 Query: 318 ggcctccgagtccgaccacctcccccgcctcctcgccgccgccatcaaggcccgcaag 375 |||| | ||||| |||| ||||||||||||||||||||||||||||||| ||| |||| Sbjct: 30161613 ggccgcggagtctgaccgcctcccccgcctcctcgccgccgccatcaagacccacaag 30161556 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 394 accaaactgaccatttgtgaaggacaagatggcactg 430 |||||| ||||||||||||||||| |||||||||||| Sbjct: 30160619 accaaattgaccatttgtgaaggagaagatggcactg 30160583 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 97 tcctcccccacgacggccttcgccggcgacgccctcct 134 ||||||||||| ||||| |||||||||||||||||| Sbjct: 30161840 tcctcccccaccgcggccgccgccggcgacgccctcct 30161803 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 cctcgccgccgccatcaaggcccgcaagc 376 ||||||||||| ||||||||| ||||||| Sbjct: 27082832 cctcgccgccgtcatcaaggcgcgcaagc 27082804
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0685G12 Length = 149155 Score = 170 bits (86), Expect = 2e-39 Identities = 155/178 (87%) Strand = Plus / Minus Query: 198 ggagttcgggttccagcgggaggagctcggcaaggagaagctcgcggggaccgtgggatt 257 |||||||||||||||||| | ||||||||| | ||||||||| || || || ||| || Sbjct: 141330 ggagttcgggttccagcgcgcggagctcgggacggagaagctggccggcacggtgcagtt 141271 Query: 258 ccacgagcgccacgtgttcctctgctacaagggccctgaggagtggccatcccgcgtcga 317 ||||||||||||||| ||||||||||||||||| || |||| |||||| |||| |||||| Sbjct: 141270 ccacgagcgccacgtcttcctctgctacaaggggcccgaggtgtggccgtcccacgtcga 141211 Query: 318 ggcctccgagtccgaccacctcccccgcctcctcgccgccgccatcaaggcccgcaag 375 |||| | ||||| |||| ||||||||||||||||||||||||||||||| ||| |||| Sbjct: 141210 ggccgcggagtctgaccgcctcccccgcctcctcgccgccgccatcaagacccacaag 141153 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 394 accaaactgaccatttgtgaaggacaagatggcactg 430 |||||| ||||||||||||||||| |||||||||||| Sbjct: 140216 accaaattgaccatttgtgaaggagaagatggcactg 140180 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 97 tcctcccccacgacggccttcgccggcgacgccctcct 134 ||||||||||| ||||| |||||||||||||||||| Sbjct: 141437 tcctcccccaccgcggccgccgccggcgacgccctcct 141400
>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_G07 Length = 93240 Score = 170 bits (86), Expect = 2e-39 Identities = 155/178 (87%) Strand = Plus / Minus Query: 198 ggagttcgggttccagcgggaggagctcggcaaggagaagctcgcggggaccgtgggatt 257 |||||||||||||||||| | ||||||||| | ||||||||| || || || ||| || Sbjct: 34437 ggagttcgggttccagcgcgcggagctcgggacggagaagctggccggcacggtgcagtt 34378 Query: 258 ccacgagcgccacgtgttcctctgctacaagggccctgaggagtggccatcccgcgtcga 317 ||||||||||||||| ||||||||||||||||| || |||| |||||| |||| |||||| Sbjct: 34377 ccacgagcgccacgtcttcctctgctacaaggggcccgaggtgtggccgtcccacgtcga 34318 Query: 318 ggcctccgagtccgaccacctcccccgcctcctcgccgccgccatcaaggcccgcaag 375 |||| | ||||| |||| ||||||||||||||||||||||||||||||| ||| |||| Sbjct: 34317 ggccgcggagtctgaccgcctcccccgcctcctcgccgccgccatcaagacccacaag 34260 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 394 accaaactgaccatttgtgaaggacaagatggcactg 430 |||||| ||||||||||||||||| |||||||||||| Sbjct: 33323 accaaattgaccatttgtgaaggagaagatggcactg 33287 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 97 tcctcccccacgacggccttcgccggcgacgccctcct 134 ||||||||||| ||||| |||||||||||||||||| Sbjct: 34544 tcctcccccaccgcggccgccgccggcgacgccctcct 34507
>gb|AC139023.14| Mus musculus chromosome 1, clone RP23-430G15, complete sequence Length = 207067 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 54 gcagcacagcctcctccccctcc 76 ||||||||||||||||||||||| Sbjct: 143069 gcagcacagcctcctccccctcc 143091
>gb|AC104542.10| Mus musculus chromosome 1, clone RP23-165D11, complete sequence Length = 211537 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 54 gcagcacagcctcctccccctcc 76 ||||||||||||||||||||||| Sbjct: 107750 gcagcacagcctcctccccctcc 107772
>dbj|D83974.1| Rattus norvegicus DAN gene, promoter region Length = 2492 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 ccctcgccgccgctgcccccgacctcg 193 ||||||||||||||||||||| ||||| Sbjct: 2174 ccctcgccgccgctgcccccgccctcg 2200
>gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0023E20, complete sequence Length = 130827 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 198 ggagttcgggttccagcgggaggagctcgg 227 ||||||| |||||||||||| ||||||||| Sbjct: 45019 ggagttcaggttccagcgggcggagctcgg 45048
>ref|NM_006042.1| Homo sapiens heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 (HS3ST3A1), mRNA Length = 2546 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 339 cccccgcctcctcgccgccgcc 360 |||||||||||||||||||||| Sbjct: 991 cccccgcctcctcgccgccgcc 970
>gb|AY358838.1| Homo sapiens clone DNA107792 HS3ST3A1 (UNQ2551) mRNA, complete cds Length = 2010 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 339 cccccgcctcctcgccgccgcc 360 |||||||||||||||||||||| Sbjct: 965 cccccgcctcctcgccgccgcc 944
>gb|BC082963.1| Homo sapiens cDNA clone IMAGE:6585273, **** WARNING: chimeric clone **** Length = 2888 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 339 cccccgcctcctcgccgccgcc 360 |||||||||||||||||||||| Sbjct: 1077 cccccgcctcctcgccgccgcc 1098
>emb|AJ973133.1| Andrographis paniculata partial ggps gene for putative geranylgerannylpyrophosphate synthase, exons 1-2, locus 2 Length = 686 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 tcgccggcgacgccctcctcgc 137 |||||||||||||||||||||| Sbjct: 57 tcgccggcgacgccctcctcgc 78
>ref|XM_504657.1| Yarrowia lipolytica CLIB122, YALI0E31845g predicted mRNA Length = 1191 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 gcacagcctcctccccctcctcatggccga 86 |||||| |||||||||||||||| |||||| Sbjct: 994 gcacaggctcctccccctcctcacggccga 1023
>gb|BC044647.1| Homo sapiens heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1, mRNA (cDNA clone MGC:52218 IMAGE:5478042), complete cds Length = 1413 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 339 cccccgcctcctcgccgccgcc 360 |||||||||||||||||||||| Sbjct: 356 cccccgcctcctcgccgccgcc 335
>gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042K08, from chromosome 2, complete sequence Length = 164628 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 198 ggagttcgggttccagcgggaggagctcgg 227 ||||||| |||||||||||| ||||||||| Sbjct: 121152 ggagttcaggttccagcgggcggagctcgg 121181
>gb|AC026385.19|AC026385 Mus musculus 17 BAC RP23-413K14 complete sequence Length = 222610 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 60 cagcctcctccccctcctcatggccg 85 ||||||||||| |||||||||||||| Sbjct: 68904 cagcctcctccgcctcctcatggccg 68929
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 198 ggagttcgggttccagcgggaggagctcgg 227 ||||||| |||||||||||| ||||||||| Sbjct: 9310038 ggagttcaggttccagcgggtggagctcgg 9310009 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 335 acctcccccgcctcctcgccgccgccat 362 |||||| ||||||||||| ||||||||| Sbjct: 20966758 acctccgccgcctcctcggcgccgccat 20966731 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 gccgccgctgcccccgacctcgac 195 |||||||||||| ||||||||||| Sbjct: 14699478 gccgccgctgccgccgacctcgac 14699455 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 ccacctcccccgcctcctcgccgccgcc 360 ||||||||||| ||||| |||||||||| Sbjct: 2751290 ccacctccccctcctccccgccgccgcc 2751263
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 198 ggagttcgggttccagcgggaggagctcgg 227 ||||||| |||||||||||| ||||||||| Sbjct: 7318150 ggagttcaggttccagcgggcggagctcgg 7318121 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 332 accacctcccccgcctcctcgccgccgcc 360 ||||||||| || |||||||||||||||| Sbjct: 4057447 accacctccacctcctcctcgccgccgcc 4057475
>gb|AC097468.3| Homo sapiens BAC clone RP11-33O4 from 2, complete sequence Length = 169741 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 gcagcacagcctcctccccctc 75 |||||||||||||||||||||| Sbjct: 140660 gcagcacagcctcctccccctc 140681
>gb|AC005411.1|AC005411 Homo sapiens chromosome 17, clone hRPK.721_K_1, complete sequence Length = 163908 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 339 cccccgcctcctcgccgccgcc 360 |||||||||||||||||||||| Sbjct: 71184 cccccgcctcctcgccgccgcc 71205
>dbj|AK065157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B21, full insert sequence Length = 3789 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 198 ggagttcgggttccagcgggaggagctcgg 227 ||||||| |||||||||||| ||||||||| Sbjct: 463 ggagttcaggttccagcgggtggagctcgg 492
>gb|AF105376.1|AF105376 Homo sapiens heparan sulfate D-glucosaminyl 3-O-sulfotransferase-3A (3OST3A1) mRNA, complete cds Length = 2546 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 339 cccccgcctcctcgccgccgcc 360 |||||||||||||||||||||| Sbjct: 991 cccccgcctcctcgccgccgcc 970
>emb|CT025760.12| Mouse DNA sequence from clone RP23-351E9 on chromosome 17, complete sequence Length = 128479 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 60 cagcctcctccccctcctcatggccg 85 ||||||||||| |||||||||||||| Sbjct: 30488 cagcctcctccgcctcctcatggccg 30513
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 198 ggagttcgggttccagcgggaggagctcgg 227 ||||||| |||||||||||| ||||||||| Sbjct: 7388236 ggagttcaggttccagcgggcggagctcgg 7388207 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 332 accacctcccccgcctcctcgccgccgcc 360 ||||||||| || |||||||||||||||| Sbjct: 4066141 accacctccacctcctcctcgccgccgcc 4066169
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 198 ggagttcgggttccagcgggaggagctcgg 227 ||||||| |||||||||||| ||||||||| Sbjct: 9309923 ggagttcaggttccagcgggtggagctcgg 9309894 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 335 acctcccccgcctcctcgccgccgccat 362 |||||| ||||||||||| ||||||||| Sbjct: 20892967 acctccgccgcctcctcggcgccgccat 20892940 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 gccgccgctgcccccgacctcgac 195 |||||||||||| ||||||||||| Sbjct: 14653762 gccgccgctgccgccgacctcgac 14653739 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 ccacctcccccgcctcctcgccgccgcc 360 ||||||||||| ||||| |||||||||| Sbjct: 2751234 ccacctccccctcctccccgccgccgcc 2751207
>emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa0026C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 190718 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 198 ggagttcgggttccagcgggaggagctcgg 227 ||||||| |||||||||||| ||||||||| Sbjct: 129017 ggagttcaggttccagcgggtggagctcgg 129046
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 gcacagcctcctccccctcctcatggccga 86 |||||| |||||||||||||||| |||||| Sbjct: 3788116 gcacaggctcctccccctcctcacggccga 3788145
>dbj|AB021874.1| Homo sapiens hedgehog gene, 5'-flanking region, partial cds Length = 1385 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 gcagcacagcctcctccccctc 75 |||||||||||||||||||||| Sbjct: 828 gcagcacagcctcctccccctc 807
>ref|XM_468855.1| Oryza sativa (japonica cultivar-group), mRNA Length = 963 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 cctcccccgcctcctcgccgccgcc 360 ||||| ||||||||||||||||||| Sbjct: 843 cctcctccgcctcctcgccgccgcc 819
>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084H09, complete sequence Length = 130151 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 332 accacctcccccgcctcctcgccgccgcc 360 ||||||||| || |||||||||||||||| Sbjct: 29109 accacctccacctcctcctcgccgccgcc 29137
>ref|XM_868872.1| PREDICTED: Bos taurus similar to heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3A1 (LOC616762), mRNA Length = 600 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 ccccgcctcctcgccgccgcc 360 ||||||||||||||||||||| Sbjct: 192 ccccgcctcctcgccgccgcc 172
>ref|XM_953142.1| Neurospora crassa OR74A hypothetical protein (NCU05924.1) partial mRNA Length = 990 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 cctcgccgccgccatcaaggc 368 ||||||||||||||||||||| Sbjct: 732 cctcgccgccgccatcaaggc 752
>ref|XM_325778.1| Neurospora crassa OR74A hypothetical protein (NCU05924.1) partial mRNA Length = 990 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 cctcgccgccgccatcaaggc 368 ||||||||||||||||||||| Sbjct: 732 cctcgccgccgccatcaaggc 752
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 cctcccccgcctcctcgccgccgcc 360 ||||| ||||||||||||||||||| Sbjct: 18351785 cctcctccgcctcctcgccgccgcc 18351761 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 cctcccccgcctcctcgccgccgc 359 ||||| |||||||||||||||||| Sbjct: 3613274 cctcctccgcctcctcgccgccgc 3613297
>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence Length = 159579 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 cctcccccgcctcctcgccgccgcc 360 ||||| ||||||||||||||||||| Sbjct: 118216 cctcctccgcctcctcgccgccgcc 118192
>ref|XM_391494.1| Gibberella zeae PH-1 chromosome linkage group 14 hypothetical protein (FG11318.1) partial mRNA Length = 462 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 cagcctcctccccctcctcatggcc 84 |||||||||| |||||||||||||| Sbjct: 15 cagcctcctcaccctcctcatggcc 39
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 217 gaggagctcggcaaggagaagctcg 241 |||||||||||||||||| |||||| Sbjct: 41638 gaggagctcggcaaggaggagctcg 41614
>emb|AL645907.9| Mouse DNA sequence from clone RP23-9N7 on chromosome 11 Contains the 5' end of a novel gene, a novel gene, the Clk4 gene for CDC like kinase 4, the 5' end of the Col23a1 gene for procollagen (type XXIII, alpha 1) and two CpG islands, complete sequence Length = 219268 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 cacagcctcctccccctcctc 78 ||||||||||||||||||||| Sbjct: 118048 cacagcctcctccccctcctc 118028
>gb|AC025839.12| Homo sapiens chromosome 8, clone RP11-370K2, complete sequence Length = 178009 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 tccctcccactcctcccccac 107 ||||||||||||||||||||| Sbjct: 70490 tccctcccactcctcccccac 70470
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 cctcccccgcctcctcgccgccgcc 360 ||||| ||||||||||||||||||| Sbjct: 18345826 cctcctccgcctcctcgccgccgcc 18345802 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 cctcccccgcctcctcgccgccgc 359 ||||| |||||||||||||||||| Sbjct: 3613385 cctcctccgcctcctcgccgccgc 3613408
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 cctcgccgccgccatcaaggcccgcaagc 376 ||||||||||| ||||||||| ||||||| Sbjct: 54481 cctcgccgccgtcatcaaggcgcgcaagc 54453
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 cctcgccgccgccatcaaggcccgcaagc 376 ||||||||||| ||||||||| ||||||| Sbjct: 136034 cctcgccgccgtcatcaaggcgcgcaagc 136006
>dbj|AK108264.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-B08, full insert sequence Length = 991 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 cctcccccgcctcctcgccgccgcc 360 ||||| ||||||||||||||||||| Sbjct: 828 cctcctccgcctcctcgccgccgcc 804
>dbj|AK100605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107G12, full insert sequence Length = 2461 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 332 accacctcccccgcctcctcgccgccgcc 360 ||||||||| || |||||||||||||||| Sbjct: 146 accacctccacctcctcctcgccgccgcc 174
>dbj|AK069029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E06, full insert sequence Length = 2118 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 348 cctcgccgccgccatcaaggcccgcaagc 376 ||||||||||| ||||||||| ||||||| Sbjct: 896 cctcgccgccgtcatcaaggcgcgcaagc 924
>emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F12, complete sequence Length = 84361 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 336 cctcccccgcctcctcgccgccgcc 360 ||||| ||||||||||||||||||| Sbjct: 32004 cctccgccgcctcctcgccgccgcc 32028
>ref|XM_476322.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1416 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 335 acctcccccgcctcctcgccgccgccat 362 |||||| | ||||||||||||||||||| Sbjct: 272 acctccgcggcctcctcgccgccgccat 299
>ref|XM_481142.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1575 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 acctcccccgcctcctcgccgccg 358 |||||| ||||||||||||||||| Sbjct: 305 acctccgccgcctcctcgccgccg 328
>ref|NM_191309.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 588 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cctcccccgcctcctcgccgccgc 359 ||||| |||||||||||||||||| Sbjct: 360 cctccgccgcctcctcgccgccgc 337
>ref|NM_190034.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 336 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 ccacctcccccgcctcctcgccgccgcc 360 ||||| || ||||||||||||||||||| Sbjct: 163 ccaccgccaccgcctcctcgccgccgcc 136
>ref|XM_473827.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 531 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 aggagttcgggttccagcgggagg 220 |||||||||||||||||| ||||| Sbjct: 347 aggagttcgggttccagcaggagg 370
>gb|AC124141.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0065C11, complete sequence Length = 141578 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcctcgccgccgccatcaag 366 |||||||||||||||||||| Sbjct: 109526 tcctcgccgccgccatcaag 109507
>gb|AF448724.1| Sinorhizobium meliloti phage PBC5, complete genome Length = 57416 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gccatcaaggcccgcaagcc 377 |||||||||||||||||||| Sbjct: 52020 gccatcaaggcccgcaagcc 52039
>gb|AF474115.1| Zea mays typical P-type R2R3 Myb protein (Myb1) gene, partial cds Length = 2399 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 tcccccgcctcctcgccgccgcca 361 ||||| |||||||||||||||||| Sbjct: 2192 tccccagcctcctcgccgccgcca 2215
>emb|CR759816.16| Zebrafish DNA sequence from clone CH211-241C24 in linkage group 7, complete sequence Length = 95674 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 gttccagcgggaggagctcggcaa 230 ||||||||||||||||| |||||| Sbjct: 68562 gttccagcgggaggagcacggcaa 68539
>gb|AC124041.3| Oryctolagus cuniculus clone LB1-44O5, complete sequence Length = 106159 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cgaccctcgccgccgctgcccccg 187 |||||||||||||||| ||||||| Sbjct: 37697 cgaccctcgccgccgccgcccccg 37674
>emb|AL662885.7| Human DNA sequence from clone RP13-208E17 on chromosome X Contains the ZCCHC5 gene for zinc finger CCHC domain containing 5, complete sequence Length = 154060 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 aactgaccatttgtgaagga 417 |||||||||||||||||||| Sbjct: 89054 aactgaccatttgtgaagga 89035
>emb|AL035088.1|HS3D11 Human DNA sequence from clone RP1-3D11 on chromosome Xq22.1-23 Contains a pseudogene similar to part of keratin 18 (K18, CYK18) (KRT18), a novel gene, the 5' end of a novel gene and two CpG islands, complete sequence Length = 146358 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cagcctcctccccctcctca 79 |||||||||||||||||||| Sbjct: 39014 cagcctcctccccctcctca 38995
>emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2 Length = 223670 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 tcgccgccgccatcaaggcc 369 |||||||||||||||||||| Sbjct: 23053 tcgccgccgccatcaaggcc 23072
>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03, complete sequence Length = 179798 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 aggagttcgggttccagcgggagg 220 |||||||||||||||||| ||||| Sbjct: 85509 aggagttcgggttccagcaggagg 85532
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tcctccccctcctcatggcc 84 |||||||||||||||||||| Sbjct: 115821 tcctccccctcctcatggcc 115802
>gb|AC164579.5| Mus musculus 6 BAC RP23-384P24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214578 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 acagcctcctccccctcctc 78 |||||||||||||||||||| Sbjct: 33204 acagcctcctccccctcctc 33185
>gb|AC150243.3| Rhinolophus ferrumequinum clone VMRC7-394F3, complete sequence Length = 110295 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 acagcctcctccccctcctc 78 |||||||||||||||||||| Sbjct: 76213 acagcctcctccccctcctc 76194
>gb|AC010406.7| Homo sapiens chromosome 5 clone CTD-2154H6, complete sequence Length = 95089 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ctacaagggccctgaggagt 301 |||||||||||||||||||| Sbjct: 33693 ctacaagggccctgaggagt 33674
>gb|AD000864.1|CH19R28051 Homo sapiens DNA from chromosome 19-cosmid R28051 containing APLP1, genomic sequence Length = 39146 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 gggattccacgagcgccacg 271 |||||||||||||||||||| Sbjct: 34536 gggattccacgagcgccacg 34517
>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold Length = 1889755 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cgaccctcgccgccgctgcccccg 187 |||||||||||||||| ||||||| Sbjct: 768445 cgaccctcgccgccgccgcccccg 768422
>gb|AF298231.1| Hordeum vulgare CBF3-like protein BCBF3 (BCBF3) gene, complete cds Length = 1922 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cttcgccggcgacgccctcctcgc 137 ||||||||||||||||| |||||| Sbjct: 760 cttcgccggcgacgcccgcctcgc 737
>gb|AF239616.1| Hordeum vulgare CRT/DRE-binding factor (CBF) mRNA, complete cds Length = 1015 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cttcgccggcgacgccctcctcgc 137 ||||||||||||||||| |||||| Sbjct: 190 cttcgccggcgacgcccgcctcgc 167
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 tcgccgccgccatcaaggcccgca 373 ||||||||| |||||||||||||| Sbjct: 471012 tcgccgccgacatcaaggcccgca 471035
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 aggagttcgggttccagcgggagg 220 |||||||||||||||||| ||||| Sbjct: 30817987 aggagttcgggttccagcaggagg 30818010
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 acctcccccgcctcctcgccgccg 358 |||||| ||||||||||||||||| Sbjct: 10185066 acctccgccgcctcctcgccgccg 10185043
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 335 acctcccccgcctcctcgccgccgccat 362 |||||| | ||||||||||||||||||| Sbjct: 3975320 acctccgcggcctcctcgccgccgccat 3975293
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcctcgccgccgccatcaag 366 |||||||||||||||||||| Sbjct: 14571521 tcctcgccgccgccatcaag 14571502
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 ccacctcccccgcctcctcgccgccgcc 360 ||||| || ||||||||||||||||||| Sbjct: 40916250 ccaccgccaccgcctcctcgccgccgcc 40916277 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 cctcccccgcctcctcgccgccgc 359 ||||| |||||||||||||||||| Sbjct: 31883853 cctccgccgcctcctcgccgccgc 31883876
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 acagcctcctccccctcctc 78 |||||||||||||||||||| Sbjct: 1168836 acagcctcctccccctcctc 1168817
>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131G08 Length = 158241 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 cctcccccgcctcctcgccgccgc 359 ||||| |||||||||||||||||| Sbjct: 69931 cctccgccgcctcctcgccgccgc 69954
>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506E04 Length = 139934 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 ccacctcccccgcctcctcgccgccgcc 360 ||||| || ||||||||||||||||||| Sbjct: 128356 ccaccgccaccgcctcctcgccgccgcc 128383
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 ccacctcccccgcctcctcgccgccgcc 360 ||||| || ||||||||||||||||||| Sbjct: 44675 ccaccgccaccgcctcctcgccgccgcc 44702
>gb|AC010423.8| Homo sapiens chromosome 5 clone CTD-2193G5, complete sequence Length = 183787 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ctacaagggccctgaggagt 301 |||||||||||||||||||| Sbjct: 175630 ctacaagggccctgaggagt 175649
>ref|XM_226738.3| PREDICTED: Rattus norvegicus B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB (predicted) (Bdp1_predicted), mRNA Length = 7838 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 cacagcctcctccccctcctcatg 81 ||||||||||||| |||||||||| Sbjct: 4182 cacagcctcctcctcctcctcatg 4159
>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19, complete sequence Length = 150620 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 cctcccccgcctcctcgccgccgc 359 ||||| |||||||||||||||||| Sbjct: 130927 cctcctccgcctcctcgccgccgc 130950
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 335 acctcccccgcctcctcgccgccgccat 362 |||||| | ||||||||||||||||||| Sbjct: 18975 acctccgcggcctcctcgccgccgccat 18948
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 335 acctcccccgcctcctcgccgccgccat 362 |||||| | ||||||||||||||||||| Sbjct: 81196 acctccgcggcctcctcgccgccgccat 81169
>gb|AC153374.5| Mus musculus 6 BAC RP23-281H4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 204379 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 acagcctcctccccctcctc 78 |||||||||||||||||||| Sbjct: 44547 acagcctcctccccctcctc 44566
>dbj|AK122018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111M10, full insert sequence Length = 2737 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcctcgccgccgccatcaag 366 |||||||||||||||||||| Sbjct: 73 tcctcgccgccgccatcaag 92
>dbj|AK120011.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-A11, full insert sequence Length = 1648 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcctcgccgccgccatcaag 366 |||||||||||||||||||| Sbjct: 1327 tcctcgccgccgccatcaag 1308
>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0023I13 Length = 165911 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 acctcccccgcctcctcgccgccg 358 |||||| ||||||||||||||||| Sbjct: 144412 acctccgccgcctcctcgccgccg 144389
>emb|AJ249453.1|MPI249453 Mentha x piperita mRNA for gpp synthase large subunit Length = 1341 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tcgccggcgacgccctcctc 135 |||||||||||||||||||| Sbjct: 659 tcgccggcgacgccctcctc 678
>dbj|AK111353.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-G09, full insert sequence Length = 895 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 aggagttcgggttccagcgggagg 220 |||||||||||||||||| ||||| Sbjct: 446 aggagttcgggttccagcaggagg 469
>dbj|AK107089.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G10, full insert sequence Length = 1511 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cctcccccgcctcctcgccgccgc 359 ||||| |||||||||||||||||| Sbjct: 627 cctccgccgcctcctcgccgccgc 604
>dbj|AK105097.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-B11, full insert sequence Length = 2569 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 acctcccccgcctcctcgccgccg 358 |||||| ||||||||||||||||| Sbjct: 1195 acctccgccgcctcctcgccgccg 1218
>dbj|AK066554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073I08, full insert sequence Length = 2525 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cctcccccgcctcctcgccgccgc 359 ||||| |||||||||||||||||| Sbjct: 2110 cctcctccgcctcctcgccgccgc 2087
>gb|AF182828.1|AF182828 Mentha x piperita geranyl diphosphate synthase large subunit mRNA, complete cds Length = 1341 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tcgccggcgacgccctcctc 135 |||||||||||||||||||| Sbjct: 659 tcgccggcgacgccctcctc 678
>dbj|AK064846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000G11, full insert sequence Length = 2852 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcctcgccgccgccatcaag 366 |||||||||||||||||||| Sbjct: 81 tcctcgccgccgccatcaag 100
>dbj|AK062409.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-E11, full insert sequence Length = 887 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cctcccccgcctcctcgccgccgc 359 ||||| |||||||||||||||||| Sbjct: 524 cctccgccgcctcctcgccgccgc 501
>gb|AY895853.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531853 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1510 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cttcgccggcgacgccctcctcgc 137 ||||||||||||||||| |||||| Sbjct: 567 cttcgccggcgacgcccgcctcgc 544
>gb|AY895852.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531851 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1510 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cttcgccggcgacgccctcctcgc 137 ||||||||||||||||| |||||| Sbjct: 567 cttcgccggcgacgcccgcctcgc 544
>gb|AY895841.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293409 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1510 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cttcgccggcgacgccctcctcgc 137 ||||||||||||||||| |||||| Sbjct: 567 cttcgccggcgacgcccgcctcgc 544
>gb|AY895840.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293402 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1510 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cttcgccggcgacgccctcctcgc 137 ||||||||||||||||| |||||| Sbjct: 567 cttcgccggcgacgcccgcctcgc 544
>gb|AY895836.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 236388 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1510 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cttcgccggcgacgccctcctcgc 137 ||||||||||||||||| |||||| Sbjct: 567 cttcgccggcgacgcccgcctcgc 544
>gb|AY895834.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 220523 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1510 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cttcgccggcgacgccctcctcgc 137 ||||||||||||||||| |||||| Sbjct: 567 cttcgccggcgacgcccgcctcgc 544
>gb|AF072725.1|AF072725 Zea mays starch branching enzyme IIb (ae) gene, complete cds Length = 23449 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 ctcccccgcctcctcgccgccgcc 360 ||||||| |||||||||||||||| Sbjct: 20984 ctcccccacctcctcgccgccgcc 20961
>emb|AL954159.4|CNS08CCX Oryza sativa chromosome 12, . BAC OSJNBa0057C04 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131673 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 gccgccgctgcccccgacctcgac 195 |||||||||||| ||||||||||| Sbjct: 44607 gccgccgctgccgccgacctcgac 44630
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 335 acctcccccgcctcctcgccgccgccat 362 |||||| ||||||||||| ||||||||| Sbjct: 52243 acctccgccgcctcctcggcgccgccat 52216
>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145539 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 ccacctcccccgcctcctcgccgccgcc 360 ||||||||||| ||||| |||||||||| Sbjct: 119157 ccacctccccctcctccccgccgccgcc 119184
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 ccacctcccccgcctcctcgccgccgcc 360 ||||||||||| ||||| |||||||||| Sbjct: 120215 ccacctccccctcctccccgccgccgcc 120188
>emb|AL928751.2|CNS08CBO Oryza sativa chromosome 12, . BAC OSJNBa0037B01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133207 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 gccgccgctgcccccgacctcgac 195 |||||||||||| ||||||||||| Sbjct: 119321 gccgccgctgccgccgacctcgac 119344
>dbj|AB042298.1| Vigna angularis mRNA for 14-3-3 protein, complete cds, clone:VaM32 Length = 978 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 acgagcgccacgtgttcctc 279 |||||||||||||||||||| Sbjct: 273 acgagcgccacgtgttcctc 254 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,484,383 Number of Sequences: 3902068 Number of extensions: 3484383 Number of successful extensions: 105773 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103103 Number of HSP's gapped (non-prelim): 2659 length of query: 435 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 413 effective length of database: 17,147,199,772 effective search space: 7081793505836 effective search space used: 7081793505836 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)