| Clone Name | bast59g03 |
|---|---|
| Clone Library Name | barley_pub |
>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor| Length = 372 Score = 129 bits (323), Expect = 5e-30 Identities = 61/120 (50%), Positives = 82/120 (68%), Gaps = 1/120 (0%) Frame = +1 Query: 94 VFVSATTAGPACSESDRDALLSIRAALSEAHLGVFSSW-KGADCCANWYGVSCDPTSGRV 270 VF+S + CS D+ AL + +++LSE +LG+F++W + DCC WYG+SCDP SGRV Sbjct: 16 VFISVISVVRCCSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRV 75 Query: 271 ADLTLRGEGEDAVMAPDGHPASGVMSGYISDHVCHLDALSSLILADWKQISGPIPSCVAT 450 D++LRGE EDA+ G SG MSG I VC L AL+SL+LADWK I+G IP C+ + Sbjct: 76 TDISLRGESEDAIFQKAGR--SGYMSGSIDPAVCDLTALTSLVLADWKGITGEIPPCITS 133
>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor| (Polygalacturonase-inhibiting protein) Length = 330 Score = 51.2 bits (121), Expect = 1e-06 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 11/114 (9%) Frame = +1 Query: 127 CSESDRDALLSIRAALSEAHLGVFSSWKGADCCANWYGVSCDPTSGRVADLTL-RGEGED 303 C+ D+ LL I+ A + + V +SWK C +WY V+CD T+ R+ LT+ G+ Sbjct: 27 CNPDDKKVLLQIKKAFGDPY--VLASWKSDTDCCDWYCVTCDSTTNRINSLTIFAGQVSG 84 Query: 304 AVMAPDG----------HPASGVMSGYISDHVCHLDALSSLILADWKQISGPIP 435 + A G H ++G I + L L SL L+ W +SG +P Sbjct: 85 QIPALVGDLPYLETLEFHKQPN-LTGPIQPAIAKLKGLKSLRLS-WTNLSGSVP 136
>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 Score = 48.1 bits (113), Expect = 1e-05 Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 6/119 (5%) Frame = +1 Query: 106 ATTAGPA----CSESDRDALLSIRAALSEAHLGVFSSWK--GADCCANWYGVSCDPTSGR 267 A A PA C SD+ AL+ ++ +L S+W ADCC W V CD +GR Sbjct: 16 AVAAAPARAVRCPPSDKQALMRVKQSLGNP--ATLSTWSLASADCC-EWDHVRCDE-AGR 71 Query: 268 VADLTLRGEGEDAVMAPDGHPASGVMSGYISDHVCHLDALSSLILADWKQISGPIPSCV 444 V ++ + G + + G I V L AL SL L +SGPIP+C+ Sbjct: 72 VNNVFIDGAND--------------VRGQIPSAVAGLTALMSLSLFRLPGLSGPIPACL 116
>PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 330 Score = 39.7 bits (91), Expect = 0.004 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 2/119 (1%) Frame = +1 Query: 97 FVSATTAGPACSESDRDALLSIRAALSEAHLGVFSSWKGADCCANWYGVSC-DPT-SGRV 270 F++ + C+++D++ LL I+ +L+ + +SW C +WY + C D T + RV Sbjct: 15 FLTTCLSKDLCNQNDKNTLLKIKKSLNNPYH--LASWDPQTDCCSWYCLECGDATVNHRV 72 Query: 271 ADLTLRGEGEDAVMAPDGHPASGVMSGYISDHVCHLDALSSLILADWKQISGPIPSCVA 447 LT+ SG +SG I V L L +L+ ++G I +A Sbjct: 73 TALTI---------------FSGQISGQIPAEVGDLPYLETLVFRKLSNLTGTIQPTIA 116
>PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 330 Score = 37.0 bits (84), Expect = 0.024 Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 16/130 (12%) Frame = +1 Query: 94 VFVSATTAGPACSESDRDALLSIRAALSEAHLGVFSSWKGADCCANWYGVSC-DPT-SGR 267 + ++ + A C + D+ LL I+ +L+ + +SW C +WY + C D T + R Sbjct: 14 LLLTTSLAKDLCHKDDKTTLLKIKKSLNNPYH--LASWDPKTDCCSWYCLECGDATVNHR 71 Query: 268 VADLTLRGEGEDAVMAPDGHPASG--------------VMSGYISDHVCHLDALSSLILA 405 V L ++ +GE + P P G ++G+I + L L+ L L+ Sbjct: 72 VTSLIIQ-DGEISGQIP---PEVGDLPYLTSLIFRKLTNLTGHIQPTIAKLKNLTFLRLS 127 Query: 406 DWKQISGPIP 435 W ++GP+P Sbjct: 128 -WTNLTGPVP 136
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 33.1 bits (74), Expect = 0.35 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +1 Query: 202 SWKGADCCANWYGVSCDPTSGRVADLTLRGEGEDAVMAPD 321 SWKG D C NW G++C ++G + ++L ++P+ Sbjct: 344 SWKGNDPCTNWIGIAC--SNGNITVISLEKMELTGTISPE 381 Score = 33.1 bits (74), Expect = 0.35 Identities = 30/114 (26%), Positives = 46/114 (40%) Frame = +1 Query: 97 FVSATTAGPACSESDRDALLSIRAALSEAHLGVFSSWKGADCCANWYGVSCDPTSGRVAD 276 F+ + A S+ D A+LS++ +L+ W D C W + C T RV Sbjct: 14 FLLLLSLSKADSDGDLSAMLSLKKSLNPPSS---FGWSDPDPC-KWTHIVCTGTK-RVTR 68 Query: 277 LTLRGEGEDAVMAPDGHPASGVMSGYISDHVCHLDALSSLILADWKQISGPIPS 438 + + G ++PD + +L L L L W ISGP+PS Sbjct: 69 IQIGHSGLQGTLSPD---------------LRNLSELERLEL-QWNNISGPVPS 106
>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1008 Score = 33.1 bits (74), Expect = 0.35 Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 10/116 (8%) Frame = +1 Query: 127 CSESDRDALLSIRAALSEAHLGVFSSWKGADCCANWYGVSCDP-TSGRVADL-----TLR 288 C D +AL A L G +S DCC NW G++C+ +GRV L L Sbjct: 31 CHPHDLEALRDFIAHLEPKPDGWINSSSSTDCC-NWTGITCNSNNTGRVIRLELGNKKLS 89 Query: 289 GEGEDAVMAPDGHPASGVMSGYISD----HVCHLDALSSLILADWKQISGPIPSCV 444 G+ +++ D + +I D + +L L +L L+ +SG IP+ + Sbjct: 90 GKLSESLGKLDEIRVLNLSRNFIKDSIPLSIFNLKNLQTLDLSS-NDLSGGIPTSI 144
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 1/91 (1%) Frame = +1 Query: 133 ESDRDALLSIRAALSEAHLGVFSSWKGADCCANWYGVSCDPTSGRVADLTLRGEGEDAVM 312 ++D +LLS + + + + S+W + GV+C GRV ++ L G G ++ Sbjct: 37 KTDSLSLLSFKTMIQDDPNNILSNWSPRKSPCQFSGVTC--LGGRVTEINLSGSGLSGIV 94 Query: 313 APDGHPASGVMSGY-ISDHVCHLDALSSLIL 402 + + + +S +S++ L++ S L+L Sbjct: 95 SFNAFTSLDSLSVLKLSENFFVLNSTSLLLL 125
>Y2393_MYCBO (P67203) Hypothetical UPF0088 protein Mb2393c| Length = 262 Score = 28.9 bits (63), Expect = 6.6 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = +1 Query: 112 TAGPACSESDRDALLSIRAALSEAHLGVFSSWKGADCCANWYGVSCD 252 T A +S+R L +I A +EA F +W+ A C ANW G D Sbjct: 80 TVVQALPKSERSEL-AIELA-TEAGADAFLAWQAARCVANWDGARVD 124
>Y2372_MYCTU (P67202) Hypothetical UPF0088 protein Rv2372c/MT2441| Length = 262 Score = 28.9 bits (63), Expect = 6.6 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = +1 Query: 112 TAGPACSESDRDALLSIRAALSEAHLGVFSSWKGADCCANWYGVSCD 252 T A +S+R L +I A +EA F +W+ A C ANW G D Sbjct: 80 TVVQALPKSERSEL-AIELA-TEAGADAFLAWQAARCVANWDGARVD 124 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,262,489 Number of Sequences: 219361 Number of extensions: 540066 Number of successful extensions: 1792 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1747 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1789 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)