| Clone Name | bast59g02 |
|---|---|
| Clone Library Name | barley_pub |
>FBX17_RAT (Q6AY27) F-box only protein 17| Length = 250 Score = 38.1 bits (87), Expect = 0.005 Identities = 18/48 (37%), Positives = 28/48 (58%) Frame = +1 Query: 25 MRDPEAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPS 168 M + + +L LP ++L++L+ VP A + RC + WRDLV PS Sbjct: 10 MTEAQHMALAELPPELLLQVLSHVPPRALVTRCRPVCRAWRDLVDGPS 57
>FBX17_MOUSE (Q9QZM8) F-box only protein 17 (F-box only protein 26)| Length = 286 Score = 37.7 bits (86), Expect = 0.007 Identities = 17/49 (34%), Positives = 29/49 (59%) Frame = +1 Query: 22 EMRDPEAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPS 168 +M + +L +LP +++++L+ VP A + RC + WRDLV PS Sbjct: 9 QMTEARRLALTKLPPELLVQVLSHVPPRALVTRCRPVCRAWRDLVDGPS 57
>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat| protein 7) (F-box protein FBL6/FBL7) Length = 491 Score = 33.9 bits (76), Expect = 0.10 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +1 Query: 37 EAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLR 177 E S+ RLP+H +++I + +P L RCA +RW +L +P R Sbjct: 110 EQASIDRLPDHSMVQIFSFLP-TNQLCRCARVCRRWYNLAWDPRLWR 155
>FBX2_MOUSE (Q80UW2) F-box only protein 2| Length = 297 Score = 33.5 bits (75), Expect = 0.13 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 8/72 (11%) Frame = +1 Query: 4 ASREEIEMRDPEAPS-------LVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVT- 159 AS EE ++R+ E L LPE ++L +LA +P + C RW++LV Sbjct: 29 ASAEEEQLREAEEEEEAEAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDG 88 Query: 160 EPSFLRRRWPEG 195 P +L + EG Sbjct: 89 APLWLLKCQQEG 100
>FBX6_HUMAN (Q9NRD1) F-box only protein 6 (F-box/G-domain protein 2)| Length = 293 Score = 33.5 bits (75), Expect = 0.13 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = +1 Query: 46 SLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 183 S+ LPE+++LE+ VP L C WRDL+ + +R+ Sbjct: 12 SINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRK 57
>FBX44_MOUSE (Q8BK26) F-box only protein 44 (F-box only protein 6a)| Length = 255 Score = 33.5 bits (75), Expect = 0.13 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 58 LPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 183 LPE+++LE+ +P L RC WRDL+ + +R+ Sbjct: 9 LPENILLELFIHIPARQLLLRCRPVCSLWRDLIDLVTLWKRK 50
>FBX6_MOUSE (Q9QZN4) F-box only protein 6 (F-box only protein 6b)| Length = 295 Score = 33.1 bits (74), Expect = 0.18 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 58 LPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 183 LPE+++LE+ +P L C + WRDL+ S +R+ Sbjct: 7 LPENILLELFIHIPAPQLLRNCRLVCRLWRDLIDVVSLWKRK 48
>FBX17_HUMAN (Q96EF6) F-box only protein 17 (F-box only protein 26)| Length = 278 Score = 33.1 bits (74), Expect = 0.18 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = +1 Query: 28 RDPEAPSLV--RLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPS 168 R P PSL LP +++++L+ VP + + RC + WRD+V P+ Sbjct: 9 RLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPT 57
>FBX44_HUMAN (Q9H4M3) F-box only protein 44 (F-box protein FBX30)| (F-box/G-domain protein 3) Length = 255 Score = 32.3 bits (72), Expect = 0.30 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +1 Query: 58 LPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 183 LPE+++LE+ VP L C WRDL+ + +R+ Sbjct: 9 LPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRK 50
>FBX6_RAT (Q923V4) F-box only protein 6 (F-box only protein 6b)| (F-box/G-domain protein 2) Length = 284 Score = 32.0 bits (71), Expect = 0.39 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +1 Query: 58 LPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 183 LPE+++LE+ VP L C WRDL+ + +R+ Sbjct: 7 LPENILLELFTHVPAPQLLRNCRLVCSLWRDLIDVMTLWKRK 48
>FBX27_MACFA (Q9N0C8) F-box only protein 27| Length = 280 Score = 31.2 bits (69), Expect = 0.67 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = +1 Query: 16 EIEMRDPEAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLV 156 E E EA L +LP ++L +L+ VP L RC + WR LV Sbjct: 17 EPESEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALV 63
>RHLE_ECOLI (P25888) Putative ATP-dependent RNA helicase rhlE (EC 3.6.1.-)| Length = 454 Score = 31.2 bits (69), Expect = 0.67 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 6/57 (10%) Frame = -1 Query: 153 EVAPALARGR---AAEEVGD---AGHARQDLQHDMLRQPHQRGRFRIPHLDLLPRRD 1 + PA+ GR A+ + G AG LQH + RQPH +GR + L L P R+ Sbjct: 30 QAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRE 86
>REG1_PYRAB (Q9V2M0) Putative HTH-type transcriptional regulator PYRAB00550| Length = 155 Score = 30.8 bits (68), Expect = 0.87 Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 5/59 (8%) Frame = +1 Query: 16 EIEMRDPEAPSLVRLPEHVVLEILARVPGVADLFRCA-----AARKRWRDLVTEPSFLR 177 E+E+ DPEAP L + VL+ + R+ ++D+++ + A R +RD+ + SFL+ Sbjct: 71 EVELVDPEAPDLAK-----VLQPILRMRNISDVYKKSGEFQLAIRGTFRDVDSLNSFLK 124
>FBX27_HUMAN (Q8NI29) F-box only protein 27 (F-box/G-domain protein 5)| Length = 283 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = +1 Query: 22 EMRDPEAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLV 156 E EA L +LP ++L +L+ VP L RC + WR LV Sbjct: 17 EPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALV 61
>FXL12_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leucine-rich repeat| protein 12) (F-box protein FBL12) Length = 326 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = +1 Query: 46 SLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTE 162 +LV LP+ V+LEI + +P V D R + RW+ LV + Sbjct: 3 TLVELPDSVLLEIFSYLP-VRDRIRISRVCHRWKRLVDD 40
>FBX27_MOUSE (Q6DIA9) F-box only protein 27| Length = 280 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Frame = +1 Query: 7 SREEIEMRDP---EAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLV 156 SR + +P E L RLP ++L +L+ VP L C + WR LV Sbjct: 6 SRTRVPTPEPDPQEVLDLSRLPPELLLLVLSHVPPRTLLMHCRRVCRAWRALV 58
>FBX2_HUMAN (Q9UK22) F-box only protein 2| Length = 296 Score = 29.3 bits (64), Expect = 2.5 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 8/72 (11%) Frame = +1 Query: 4 ASREEIEMRDPE-------APSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVT- 159 AS EE D + A L LPE ++L +LA +P + C RW++LV Sbjct: 25 ASAEEERPEDQQEEEAAAAAAYLDELPEPLLLRVLAALPAAELVQACRLVCLRWKELVDG 84 Query: 160 EPSFLRRRWPEG 195 P +L + EG Sbjct: 85 APLWLLKCQQEG 96
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 28.9 bits (63), Expect = 3.3 Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 18/123 (14%) Frame = -1 Query: 342 GARDEGAKQGTTGAEDRPRRADEAGARRPFPAL-----ATLPAEEADEGGXXXXX----- 193 G+R +G GA+ P + + G RRP PA+ +PA+ +GG Sbjct: 286 GSRPQGGS--AQGAQGAPSQERQGGGRRPSPAMMPPTPGQMPAKAPGKGGRGGQAGGGAG 343 Query: 192 --------XXXXXAQEGRLGDEVAPALARGRAAEEVGDAGHARQDLQHDMLRQPHQRGRF 37 + GR G A A R A G ++ +++ ++ P+ G Sbjct: 344 GGFNRGGGTGGGAGRGGRRGG-TAGAFGRPGGAPRRGRKSKRQKRNEYESMQAPNVIGGV 402 Query: 36 RIP 28 R+P Sbjct: 403 RLP 405
>ERYA1_SACER (Q03131) Erythronolide synthase, modules 1 and 2 (EC 2.3.1.94) (ORF| 1) (6-deoxyerythronolide B synthase I) (DEBS 1) Length = 3491 Score = 28.9 bits (63), Expect = 3.3 Identities = 27/67 (40%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = -1 Query: 306 GAEDRPR-RADEAGARRPFPALATLPAEEADEGGXXXXXXXXXXAQEGRLGDEVAPALAR 130 G+ED+ RAD ARR PA T +E A GG LG EVA LA Sbjct: 3024 GSEDQVAVRADAVRARRLSPAHVTATSEYAVPGGTILVTGGTAG-----LGAEVARWLA- 3077 Query: 129 GRAAEEV 109 GR AE + Sbjct: 3078 GRGAEHL 3084
>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC| 3.2.1.-) (Soluble cell wall protein 11) Length = 542 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/66 (24%), Positives = 25/66 (37%) Frame = -2 Query: 209 EQWHAPSGQRRRRKDGSVTXXXXXXXXXXXXXXXATPGTRARISSTTCSGSLTSEGASGS 30 E + P+ S T + T + SST + + TSEG+S S Sbjct: 214 ESTNTPTSSSTSSSTSSSTSSSTSSSTSSSTSSSTSSSTSSSTSSTQETAATTSEGSSSS 273 Query: 29 LISISS 12 +I+S Sbjct: 274 SAAITS 279
>TESK2_RAT (Q924U5) Dual specificity testis-specific protein kinase 2 (EC| 2.7.12.1) (Testicular protein kinase 2) Length = 570 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%) Frame = +1 Query: 70 VVLEILARVPGVADLFRC----AAARKRWRDLVTEPSFLRRRWPEGAC 201 +V ++ A PG L C A + +RWR L P FL + P C Sbjct: 426 LVFDLDAPGPGTVSLADCQEPLAPSSRRWRSLPGSPEFLHQACPFVGC 473
>RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = -2 Query: 95 TRARISSTTCSGSLTSEGASGSLISISS 12 TR+R SST+ SGS TS G+S S S+ Sbjct: 75 TRSRSSSTSSSGSSTSTGSSSGSSSSSA 102
>RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = -2 Query: 95 TRARISSTTCSGSLTSEGASGSLISISS 12 TR+R SST+ SGS TS G+S S S+ Sbjct: 75 TRSRSSSTSSSGSSTSTGSSSGSSSSSA 102
>RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = -2 Query: 95 TRARISSTTCSGSLTSEGASGSLISISS 12 TR+R SST+ SGS TS G+S S S+ Sbjct: 75 TRSRSSSTSSSGSSTSTGSSSGSSSSSA 102
>RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = -2 Query: 95 TRARISSTTCSGSLTSEGASGSLISISS 12 TR+R SST+ SGS TS G+S S S+ Sbjct: 75 TRSRSSSTSSSGSSTSTGSSSGSSSSSA 102
>RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain 1 (SR-related| protein LDC2) Length = 305 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = -2 Query: 95 TRARISSTTCSGSLTSEGASGSLISISS 12 TR+R SST+ SGS TS G+S S S+ Sbjct: 75 TRSRSSSTSSSGSSTSTGSSSGSSSSSA 102
>CAC1C_RABIT (P15381) Voltage-dependent L-type calcium channel alpha-1C subunit| (Voltage-gated calcium channel alpha subunit Cav1.2) (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) (Smooth muscle calcium channel blocker receptor) Length = 2171 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -1 Query: 315 GTTGAEDRPRRADEAGARRPFPALATLPAEEADEG 211 G+ E+ P R D + ARR P T+P++ +G Sbjct: 2023 GSWSGENSPCRGDSSAARRARPVSLTVPSQAGAQG 2057
>XP2_XENLA (P17437) Skin secretory protein xP2 precursor (APEG protein)| Length = 439 Score = 28.1 bits (61), Expect = 5.6 Identities = 24/80 (30%), Positives = 25/80 (31%) Frame = -1 Query: 330 EGAKQGTTGAEDRPRRADEAGARRPFPALATLPAEEADEGGXXXXXXXXXXAQEGRLGDE 151 EG AE + GA P PA PA EGG A G Sbjct: 59 EGGAPAPAPAEGAEPAPADGGAPAPAPAEGGAPAPAPAEGGAPAPAPAEGGAPAPAEGGA 118 Query: 150 VAPALARGRAAEEVGDAGHA 91 APA A G A G A Sbjct: 119 PAPAPAEGEAPAPAPAEGEA 138
>THLA_CLOAB (P45359) Acetyl-CoA acetyltransferase (EC 2.3.1.9) (Acetoacetyl-CoA| thiolase) Length = 392 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/42 (30%), Positives = 18/42 (42%) Frame = -1 Query: 228 EEADEGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGD 103 EE DE + G+ DE+ P + +GR E V D Sbjct: 173 EEQDEFALASQKKAEEAIKSGQFKDEIVPVVIKGRKGETVVD 214
>GLMS_VIBVY (Q7MP62) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 609 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = -1 Query: 162 LGDEVAPALARGRAAEEVGDAGHARQDLQHDMLRQP 55 LG+ V +A A + GD G R +Q ++ QP Sbjct: 225 LGERVEREIAESNAEHDAGDKGQYRHFMQKEIYEQP 260
>GLMS_VIBF1 (Q5E279) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 609 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = -1 Query: 159 GDEVAPALARGRAAEEVGDAGHARQDLQHDMLRQP 55 G++V A+ A + GD G R +Q ++ QP Sbjct: 226 GEQVERAITESNAEHDAGDKGQYRHFMQKEVFEQP 260
>SLT_HAEIN (P44888) Putative soluble lytic murein transglycosylase precursor| (EC 3.2.1.-) Length = 593 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/54 (24%), Positives = 27/54 (50%) Frame = +1 Query: 10 REEIEMRDPEAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSF 171 ++ ++ P APS + + ++ A + + +L R A++RWR L+ F Sbjct: 335 KQAYQLNVPIAPSFTQAEQLPFKQVFAMITELRELGRNGLAKQRWRILLDNVDF 388
>IF2_CORJK (Q4JV51) Translation initiation factor IF-2| Length = 922 Score = 27.3 bits (59), Expect = 9.6 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 7/52 (13%) Frame = -1 Query: 342 GARDEGAKQGTTGAEDRPRRADEAGARRPFPAL-------ATLPAEEADEGG 208 G+R GAK+ A +P A + G RRP PA+ A +P++ + GG Sbjct: 203 GSRPGGAKK----AGPKPGGAKQGGGRRPSPAMMPSHPNPAQMPSKSDNFGG 250
>VASP_MOUSE (P70460) Vasodilator-stimulated phosphoprotein (VASP)| Length = 374 Score = 27.3 bits (59), Expect = 9.6 Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 10/113 (8%) Frame = -1 Query: 330 EGAKQGTTGAEDRPRRADEAGARRPFPALATLPAEEADEGGXXXXXXXXXXAQEGRLGDE 151 +G G +GA A AGA+ L + +E GG + G L +E Sbjct: 209 QGPNSGGSGAPGLA--AAIAGAK-----LRKVSKQEEASGGPLAPKAENSRSTGGGLMEE 261 Query: 150 VAPALARGRAAEEVG----------DAGHARQDLQHDMLRQPHQRGRFRIPHL 22 + LAR R A +VG + AR Q + +R+P ++ +P + Sbjct: 262 MNAMLARRRKATQVGEKPPKDESASEESEARLPAQSEPVRRPWEKNSTTLPRM 314
>MAX2_ORYSA (Q5VMP0) F-box/LRR-repeat MAX2 homolog (F-box and leucine-rich| repeat MAX2 homolog) Length = 720 Score = 27.3 bits (59), Expect = 9.6 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = +1 Query: 1 IASREEIEMRDPEAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWR 147 +A EE+E + +++ LPE ++L IL+ + V R A A R R Sbjct: 1 MAEEEEVEEGRSSSSAILDLPEPLLLHILSFLTDVRSRHRAALACGRMR 49
>TESK2_MOUSE (Q8VCT9) Dual specificity testis-specific protein kinase 2 (EC| 2.7.12.1) (Testicular protein kinase 2) Length = 570 Score = 27.3 bits (59), Expect = 9.6 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%) Frame = +1 Query: 70 VVLEILARVPGVADLFRC----AAARKRWRDLVTEPSFLRRRWPEGAC 201 +V ++ A PG L C A + +RWR L P FL + P C Sbjct: 426 LVFDLDAPGPGSTTLADCQEPLAMSSRRWRSLPGSPEFLHQACPFMGC 473
>DHX37_HUMAN (Q8IY37) Probable ATP-dependent RNA helicase DHX37 (EC 3.6.1.-)| (DEAH box protein 37) Length = 1157 Score = 27.3 bits (59), Expect = 9.6 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +1 Query: 73 VLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRRW 186 V E +PG+ + C +KR+ D VT S R W Sbjct: 622 VAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTW 659 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,872,482 Number of Sequences: 219361 Number of extensions: 516683 Number of successful extensions: 2329 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 2064 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2320 length of database: 80,573,946 effective HSP length: 89 effective length of database: 61,050,817 effective search space used: 1465219608 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)