| Clone Name | bast59f06 |
|---|---|
| Clone Library Name | barley_pub |
>TOCC_MAIZE (Q94FY8) Probable tocopherol cyclase, chloroplast precursor| (Sucrose export defective 1) Length = 474 Score = 120 bits (302), Expect = 6e-28 Identities = 52/62 (83%), Positives = 57/62 (91%) Frame = +1 Query: 181 LRTPHSGYHYDGTARAFFEGWYFKVSIPECRQSFCFMYSVENPFFRDGMTALDQAIHGPR 360 LRTPHSGYH+DGTAR FFEGWYFKVSIPECRQSFCFMYSVENP FRDGM+ LD+ ++ PR Sbjct: 64 LRTPHSGYHFDGTARPFFEGWYFKVSIPECRQSFCFMYSVENPLFRDGMSDLDKLLYRPR 123 Query: 361 FT 366 FT Sbjct: 124 FT 125
>TOCC_ARATH (Q94FY7) Tocopherol cyclase, chloroplast precursor (Vitamin E| pathway gene 1 protein) (Sucrose export defective 1) Length = 488 Score = 108 bits (269), Expect = 4e-24 Identities = 46/62 (74%), Positives = 54/62 (87%) Frame = +1 Query: 181 LRTPHSGYHYDGTARAFFEGWYFKVSIPECRQSFCFMYSVENPFFRDGMTALDQAIHGPR 360 LRTPHSGYH+DGT R FFEGWYF+VSIPE R+SFCFMYSVENP FR ++ L+ A++GPR Sbjct: 75 LRTPHSGYHFDGTPRKFFEGWYFRVSIPEKRESFCFMYSVENPAFRQSLSPLEVALYGPR 134 Query: 361 FT 366 FT Sbjct: 135 FT 136
>PHLD_MYCTU (P0A5R8) Phospholipase C 4 precursor (EC 3.1.4.3)| Length = 514 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Frame = -2 Query: 369 PGKPWTVYGLVESSHPITKEW-----ILNRVHETEALPALWNGHLEVPSFEESPGGSIIV 205 P W + ++ES HP I+N + A PA+W + S++E+ G V Sbjct: 297 PRVSWVIPNVLESEHPAVPAAAGAFAIVNILRILLANPAVWEKTALIVSYDENGGFFDHV 356 Query: 204 IPA 196 +PA Sbjct: 357 VPA 359
>PHLD_MYCBO (P0A5R9) Phospholipase C 4 precursor (EC 3.1.4.3)| Length = 514 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Frame = -2 Query: 369 PGKPWTVYGLVESSHPITKEW-----ILNRVHETEALPALWNGHLEVPSFEESPGGSIIV 205 P W + ++ES HP I+N + A PA+W + S++E+ G V Sbjct: 297 PRVSWVIPNVLESEHPAVPAAAGAFAIVNILRILLANPAVWEKTALIVSYDENGGFFDHV 356 Query: 204 IPA 196 +PA Sbjct: 357 VPA 359
>GALR_ECOLI (P03024) HTH-type transcriptional regulator galR (Galactose operon| repressor) Length = 343 Score = 27.7 bits (60), Expect = 7.1 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = -3 Query: 281 KLCLHSGMDTLKYHPSKKALAV 216 +L +HS M++L YHP+ A A+ Sbjct: 33 RLAVHSAMESLSYHPNANARAL 54
>ZNF74_HUMAN (Q16587) Zinc finger protein 74 (hZNF7)| Length = 643 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = -3 Query: 365 VNRGPCMAWSRAVIPSRKNGFSTEYMKQK 279 V RGPC W +PS++ G E Q+ Sbjct: 108 VPRGPCPEWELKAVPSQQQGICKEEPAQE 136
>DBP2_NEUCR (Q7SBC6) ATP-dependent RNA helicase dbp-2 (EC 3.6.1.-)| Length = 562 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = -2 Query: 75 RSRGAGRWPGGRHESGGG 22 R RG G W GGR GGG Sbjct: 529 RGRGGGGWRGGRGGGGGG 546 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,632,642 Number of Sequences: 219361 Number of extensions: 696811 Number of successful extensions: 3079 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2721 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3069 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)