>FLA7_ARATH (Q9SJ81) Fasciclin-like arabinogalactan protein 7 precursor|
          Length = 254

 Score = 35.8 bits (81), Expect = 0.027
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +2

Query: 212 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNA 355
           N+T +L  AG +  F+  + ST        QAN ++ G T+F P D+A
Sbjct: 46  NLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDA 93

>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor|
           (AtAGP8)
          Length = 420

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = +2

Query: 200 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNA 355
           A+  N+T +LEKAG  T F  L+ S+     L    +  + G TVFAP+D A
Sbjct: 185 ASLSNITGLLEKAGCKT-FANLLVSSGV---LKTYESAVEKGLTVFAPSDEA 232

>FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 precursor|
          Length = 422

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 20/52 (38%), Positives = 28/52 (53%)
 Frame = +2

Query: 200 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNA 355
           A   N+T +LEKAG  T F  L+ S+     +    +  + G TVFAP+D A
Sbjct: 186 AGVSNITGLLEKAGCKT-FANLLVSSGV---IKTFESTVEKGLTVFAPSDEA 233

>PSPA_SHIFL (P0AFM8) Phage shock protein A|
          Length = 221

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 212 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANES 316
           N+ A+LEKA    K +RLM    +DT +  ++  +
Sbjct: 13  NINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSA 47

>PSPA_ECOLI (P0AFM6) Phage shock protein A|
          Length = 221

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 212 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANES 316
           N+ A+LEKA    K +RLM    +DT +  ++  +
Sbjct: 13  NINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSA 47

>PSPA_ECO57 (P0AFM7) Phage shock protein A|
          Length = 221

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 212 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANES 316
           N+ A+LEKA    K +RLM    +DT +  ++  +
Sbjct: 13  NINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSA 47

>PALB_CANGA (Q6FJ28) Calpain-like protease palB/RIM13 (EC 3.4.22.-) (Cysteine|
           protease RIM13)
          Length = 713

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 203 AAPNVTAV-LEKAGQYTK-FIRLMASTQQDTQLNAQANESDTGFTVFAPTDN 352
           A+  +T + L    +Y K F+R+   TQ+D + N +   +DTG  +  P +N
Sbjct: 610 ASTGITKISLVNRNKYNKVFMRIYPQTQEDYRYNYRVISADTGEDLVKPGNN 661


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,966,300
Number of Sequences: 219361
Number of extensions: 232383
Number of successful extensions: 793
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)