ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast59f01 |
|---|---|
| Clone Library Name | barley_pub |
>FDH2_ORYSA (Q67U69) Formate dehydrogenase 2, mitochondrial precursor (EC| 1.2.1.2) (NAD-dependent formate dehydrogenase 2) (FDH 2) Length = 378 Score = 211 bits (537), Expect = 5e-55 Identities = 97/139 (69%), Positives = 115/139 (82%) Frame = +1 Query: 1 FYKGGEHAGQNPNFVGCVENALGIRSWLESQGHQYIVTDDKDGPNCELEKHMADAHVLII 180 FYKGGE+A +NPNFVGCV++ALGIR WLES+GH+YIVTDDK+G NCELEKH+ DAHVLI Sbjct: 36 FYKGGEYADKNPNFVGCVDSALGIRGWLESKGHRYIVTDDKEGINCELEKHIEDAHVLIT 95 Query: 181 TPFHPAYVSADRIRRGKNLELLLTAGIGSDHIXXXXXXXXXXXXXXXXXSNTVSVAEDQL 360 TPFHPAY++A+RI++ KNLELLLTAG+GSDHI SNTVSVAEDQL Sbjct: 96 TPFHPAYITAERIKKAKNLELLLTAGVGSDHIDLPAAAAAGLTVAEITGSNTVSVAEDQL 155 Query: 361 MRILVLMRNFLPGHHQAIS 417 MRIL+L+RNFLPGHHQ ++ Sbjct: 156 MRILLLLRNFLPGHHQIVN 174
>FDH_SOLTU (Q07511) Formate dehydrogenase, mitochondrial precursor (EC| 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) Length = 381 Score = 204 bits (519), Expect = 7e-53 Identities = 94/139 (67%), Positives = 110/139 (79%) Frame = +1 Query: 1 FYKGGEHAGQNPNFVGCVENALGIRSWLESQGHQYIVTDDKDGPNCELEKHMADAHVLII 180 FYK E+A NPNF+GC ENALGIR WLES+GHQYIVT DK+GP+CELEKH+ D HVLI Sbjct: 39 FYKANEYAEMNPNFLGCAENALGIREWLESKGHQYIVTPDKEGPDCELEKHIPDLHVLIS 98 Query: 181 TPFHPAYVSADRIRRGKNLELLLTAGIGSDHIXXXXXXXXXXXXXXXXXSNTVSVAEDQL 360 TPFHPAYV+A+RI++ KNL+LLLTAGIGSDH+ SNTVSVAED+L Sbjct: 99 TPFHPAYVTAERIKKAKNLQLLLTAGIGSDHVDLKAAAAAGLTVAEVTGSNTVSVAEDEL 158 Query: 361 MRILVLMRNFLPGHHQAIS 417 MRIL+L+RNFLPGHHQ I+ Sbjct: 159 MRILILVRNFLPGHHQVIN 177
>FDH_ARATH (Q9S7E4) Formate dehydrogenase, mitochondrial precursor (EC| 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) Length = 384 Score = 203 bits (516), Expect = 1e-52 Identities = 94/138 (68%), Positives = 111/138 (80%) Frame = +1 Query: 1 FYKGGEHAGQNPNFVGCVENALGIRSWLESQGHQYIVTDDKDGPNCELEKHMADAHVLII 180 FYK E+A +NPNF+GCVENALGIR WLESQGHQYIVTDDK+GP+CELEKH+ D HVLI Sbjct: 42 FYKANEYATKNPNFLGCVENALGIRDWLESQGHQYIVTDDKEGPDCELEKHIPDLHVLIS 101 Query: 181 TPFHPAYVSADRIRRGKNLELLLTAGIGSDHIXXXXXXXXXXXXXXXXXSNTVSVAEDQL 360 TPFHPAYV+A+RI++ KNL+LLLTAGIGSDHI SN VSVAED+L Sbjct: 102 TPFHPAYVTAERIKKAKNLKLLLTAGIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDEL 161 Query: 361 MRILVLMRNFLPGHHQAI 414 MRIL+LMRNF+PG++Q + Sbjct: 162 MRILILMRNFVPGYNQVV 179
>FDH1_ORYSA (Q9SXP2) Formate dehydrogenase 1, mitochondrial precursor (EC| 1.2.1.2) (NAD-dependent formate dehydrogenase 1) (FDH 1) Length = 376 Score = 202 bits (513), Expect = 3e-52 Identities = 96/138 (69%), Positives = 109/138 (78%) Frame = +1 Query: 1 FYKGGEHAGQNPNFVGCVENALGIRSWLESQGHQYIVTDDKDGPNCELEKHMADAHVLII 180 FYKGGE+A +NPNFVGCVE ALGIR WLES+GH YIVTDDK+G N ELEKH+ D HVLI Sbjct: 34 FYKGGEYADKNPNFVGCVEGALGIREWLESKGHHYIVTDDKEGLNSELEKHIEDMHVLIT 93 Query: 181 TPFHPAYVSADRIRRGKNLELLLTAGIGSDHIXXXXXXXXXXXXXXXXXSNTVSVAEDQL 360 TPFHPAYVSA+RI++ KNLELLLTAGIGSDHI SNTVSVAED+L Sbjct: 94 TPFHPAYVSAERIKKAKNLELLLTAGIGSDHIDLPAAAAAGLTVAEVTGSNTVSVAEDEL 153 Query: 361 MRILVLMRNFLPGHHQAI 414 MRIL+L+RNFLPG+ Q + Sbjct: 154 MRILILLRNFLPGYQQVV 171
>FDH_HORVU (Q9ZRI8) Formate dehydrogenase, mitochondrial precursor (EC| 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) Length = 377 Score = 190 bits (483), Expect = 1e-48 Identities = 90/138 (65%), Positives = 106/138 (76%) Frame = +1 Query: 1 FYKGGEHAGQNPNFVGCVENALGIRSWLESQGHQYIVTDDKDGPNCELEKHMADAHVLII 180 FY+ GE+A +NPNFVGCVE ALGIR WLES+GH YIVTDDK+G N ELEKH+ D HVLI Sbjct: 35 FYQAGEYADKNPNFVGCVEGALGIRDWLESKGHHYIVTDDKEGFNSELEKHIEDMHVLIT 94 Query: 181 TPFHPAYVSADRIRRGKNLELLLTAGIGSDHIXXXXXXXXXXXXXXXXXSNTVSVAEDQL 360 TPFHPAYV+A++I++ K ELLLTAGIGSDHI SNTVSVAED+L Sbjct: 95 TPFHPAYVTAEKIKKAKTPELLLTAGIGSDHIDLPAAAAAGLTVARVTGSNTVSVAEDEL 154 Query: 361 MRILVLMRNFLPGHHQAI 414 MRIL+L+RNFLPG+ Q + Sbjct: 155 MRILILLRNFLPGYQQVV 172
>FDH_PICAN (P33677) Formate dehydrogenase (EC 1.2.1.2) (NAD-dependent formate| dehydrogenase) (FDH) Length = 361 Score = 142 bits (358), Expect = 3e-34 Identities = 71/140 (50%), Positives = 89/140 (63%), Gaps = 2/140 (1%) Frame = +1 Query: 4 YKGGEHAGQNPNFVGCVENALGIRSWLESQGHQYIVTDDKDGPNCELEKHMADAHVLIIT 183 Y G+HA GC ENALGIR WLE QGH +VT DK+G N LEK+++DA V+I T Sbjct: 7 YDAGKHAQDEERLYGCTENALGIRDWLEKQGHDVVVTSDKEGQNSVLEKNISDADVIIST 66 Query: 184 PFHPAYVSADRIRRGKNLELLLTAGIGSDHI--XXXXXXXXXXXXXXXXXSNTVSVAEDQ 357 PFHPAY++ +RI + K L+LL+ AG+GSDHI SN VSVAE Sbjct: 67 PFHPAYITKERIDKAKKLKLLVVAGVGSDHIDLDYINQSGRDISVLEVTGSNVVSVAEHV 126 Query: 358 LMRILVLMRNFLPGHHQAIS 417 +M +LVL+RNF+P H Q IS Sbjct: 127 VMTMLVLVRNFVPAHEQIIS 146
>FDH_EMENI (Q03134) Probable formate dehydrogenase (EC 1.2.1.2) (NAD-dependent| formate dehydrogenase) (FDH) Length = 377 Score = 139 bits (349), Expect = 3e-33 Identities = 66/137 (48%), Positives = 84/137 (61%), Gaps = 2/137 (1%) Frame = +1 Query: 4 YKGGEHAGQNPNFVGCVENALGIRSWLESQGHQYIVTDDKDGPNCELEKHMADAHVLIIT 183 Y GG HA P +G EN LGIR W+E QGH + T DKDG N +K + DA V+I T Sbjct: 4 YDGGSHAKDQPGLLGTTENELGIRKWIEEQGHTLVTTSDKDGENSTFDKELVDAEVIITT 63 Query: 184 PFHPAYVSADRIRRGKNLELLLTAGIGSDHI--XXXXXXXXXXXXXXXXXSNTVSVAEDQ 357 PFHP Y++A+R+ + KNL+L +TAGIGSDH+ SN VSVAE Sbjct: 64 PFHPGYLTAERLAKAKNLKLAVTAGIGSDHVDLDAANKTNGGITVAEVTGSNVVSVAEHV 123 Query: 358 LMRILVLMRNFLPGHHQ 408 +M IL+L+RNF+P H Q Sbjct: 124 VMTILLLVRNFVPAHDQ 140
>FDH_NEUCR (Q07103) Formate dehydrogenase (EC 1.2.1.2) (NAD-dependent formate| dehydrogenase) (FDH) Length = 375 Score = 137 bits (344), Expect = 1e-32 Identities = 65/137 (47%), Positives = 85/137 (62%), Gaps = 2/137 (1%) Frame = +1 Query: 4 YKGGEHAGQNPNFVGCVENALGIRSWLESQGHQYIVTDDKDGPNCELEKHMADAHVLIIT 183 Y GG+H + P +G ++N LG+R WLE QGH + T DKDG N +K + DA ++I T Sbjct: 9 YDGGKHGEEVPELLGTIQNELGLRKWLEDQGHTLVTTCDKDGENSTFDKELEDAEIIITT 68 Query: 184 PFHPAYVSADRIRRGKNLELLLTAGIGSDHI--XXXXXXXXXXXXXXXXXSNTVSVAEDQ 357 PFHP Y++A+R+ R K L+L +TAGIGSDH+ SN VSVAE Sbjct: 69 PFHPGYLTAERLARAKKLKLAVTAGIGSDHVDLNAANKTNGGITVAEVTGSNVVSVAEHV 128 Query: 358 LMRILVLMRNFLPGHHQ 408 LM ILVL+RNF+P H Q Sbjct: 129 LMTILVLVRNFVPAHEQ 145
>FDH2_YEAST (Q08987) Formate dehydrogenase 2 (EC 1.2.1.2) (NAD-dependent| formate dehydrogenase 2) Length = 376 Score = 127 bits (318), Expect = 1e-29 Identities = 61/139 (43%), Positives = 88/139 (63%), Gaps = 1/139 (0%) Frame = +1 Query: 4 YKGGEHAGQNPNFVGCVENALGIRSWLESQGHQYIVTDDKDG-PNCELEKHMADAHVLII 180 Y+GG+HA + +GC+EN LGIR+++E QG++ + T DKD P +++ + DA ++I Sbjct: 11 YEGGKHAEEQEKLLGCIENELGIRNFIEEQGYELVTTIDKDPEPTSTVDRELKDAEIVIT 70 Query: 181 TPFHPAYVSADRIRRGKNLELLLTAGIGSDHIXXXXXXXXXXXXXXXXXSNTVSVAEDQL 360 TPF PAY+S +RI NL+L +TAG+GSDH+ SN VSVAE + Sbjct: 71 TPFFPAYISRNRIAEAPNLKLCVTAGVGSDHVDLEAANERKITVTEVTGSNVVSVAEHVM 130 Query: 361 MRILVLMRNFLPGHHQAIS 417 ILVL+RN+ GH QAI+ Sbjct: 131 ATILVLIRNYNGGHQQAIN 149
>FDH1_YEAST (Q08911) Formate dehydrogenase 1 (EC 1.2.1.2) (NAD-dependent| formate dehydrogenase 1) Length = 376 Score = 127 bits (318), Expect = 1e-29 Identities = 61/139 (43%), Positives = 88/139 (63%), Gaps = 1/139 (0%) Frame = +1 Query: 4 YKGGEHAGQNPNFVGCVENALGIRSWLESQGHQYIVTDDKDG-PNCELEKHMADAHVLII 180 Y+GG+HA + +GC+EN LGIR+++E QG++ + T DKD P +++ + DA ++I Sbjct: 11 YEGGKHAEEQEKLLGCIENELGIRNFIEEQGYELVTTIDKDPEPTSTVDRELKDAEIVIT 70 Query: 181 TPFHPAYVSADRIRRGKNLELLLTAGIGSDHIXXXXXXXXXXXXXXXXXSNTVSVAEDQL 360 TPF PAY+S +RI NL+L +TAG+GSDH+ SN VSVAE + Sbjct: 71 TPFFPAYISRNRIAEAPNLKLCVTAGVGSDHVDLEAANERKITVTEVTGSNVVSVAEHVM 130 Query: 361 MRILVLMRNFLPGHHQAIS 417 ILVL+RN+ GH QAI+ Sbjct: 131 ATILVLIRNYNGGHQQAIN 149
>FDH_PSESR (P33160) Formate dehydrogenase (EC 1.2.1.2) (NAD-dependent formate| dehydrogenase) (FDH) Length = 400 Score = 116 bits (290), Expect = 2e-26 Identities = 57/123 (46%), Positives = 76/123 (61%) Frame = +1 Query: 43 VGCVENALGIRSWLESQGHQYIVTDDKDGPNCELEKHMADAHVLIITPFHPAYVSADRIR 222 +G V LG+R +LES GH +VT DKDGP+ E+ + DA V+I PF PAY++ +RI Sbjct: 50 LGSVSGELGLRKYLESNGHTLVVTSDKDGPDSVFERELVDADVVISQPFWPAYLTPERIA 109 Query: 223 RGKNLELLLTAGIGSDHIXXXXXXXXXXXXXXXXXSNTVSVAEDQLMRILVLMRNFLPGH 402 + KNL+L LTAGIGSDH+ N++SVAE +M IL L+RN+LP H Sbjct: 110 KAKNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSH 169 Query: 403 HQA 411 A Sbjct: 170 EWA 172
>SERA_ARCFU (O29445) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 527 Score = 33.1 bits (74), Expect = 0.27 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 7/95 (7%) Frame = +1 Query: 121 KDGPNCELEKHMADAHVLIITPFHPAYV-------SADRIRRGKNLELLLTAGIGSDHIX 279 K+G E++ M+ ++ P + A V A+ I+ KNL+++ AG+G D+I Sbjct: 19 KNGLEVEVKTGMSREELIREVPKYEAIVVRSQTKVDAEVIQAAKNLKIIGRAGVGVDNID 78 Query: 280 XXXXXXXXXXXXXXXXSNTVSVAEDQLMRILVLMR 384 NT+S AE + +L R Sbjct: 79 INAATQRGIVVVNAPGGNTISTAEHAIALMLAAAR 113
>SERA_METJA (Q58424) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 524 Score = 31.6 bits (70), Expect = 0.78 Identities = 22/83 (26%), Positives = 40/83 (48%) Frame = +1 Query: 139 ELEKHMADAHVLIITPFHPAYVSADRIRRGKNLELLLTAGIGSDHIXXXXXXXXXXXXXX 318 EL + + DA VL++ V+ D I + + L+++ AG+G D+I Sbjct: 34 ELLEKIKDADVLVVRS--GTKVTRDVIEKAEKLKVIGRAGVGVDNIDVEAATEKGIIVVN 91 Query: 319 XXXSNTVSVAEDQLMRILVLMRN 387 ++++SVAE + +L RN Sbjct: 92 APDASSISVAELTMGLMLAAARN 114
>SERA_SYNY3 (P73821) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 554 Score = 31.2 bits (69), Expect = 1.0 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 7/90 (7%) Frame = +1 Query: 139 ELEKHMADAHVLIITPFHPAY-------VSADRIRRGKNLELLLTAGIGSDHIXXXXXXX 297 +++ +++A ++ I P + A V+ I+ G L+++ AG+G D+I Sbjct: 53 DVKTGLSEAEIIDIVPEYDAIMLRSATKVTEKIIQAGSQLKIIGRAGVGVDNIDVPAATR 112 Query: 298 XXXXXXXXXXSNTVSVAEDQLMRILVLMRN 387 NT++ AE L ++ L R+ Sbjct: 113 QGIVVVNSPEGNTIAAAEHALAMMMALARH 142
>SERA_BACSU (P35136) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 525 Score = 29.6 bits (65), Expect = 2.9 Identities = 28/107 (26%), Positives = 46/107 (42%) Frame = +1 Query: 67 GIRSWLESQGHQYIVTDDKDGPNCELEKHMADAHVLIITPFHPAYVSADRIRRGKNLELL 246 G++ +ES +I K+ + E E H DA L++ V+ D + +L+++ Sbjct: 14 GLQPLIESD---FIEIVQKNVADAEDELHTFDA--LLVRS--ATKVTEDLFNKMTSLKIV 66 Query: 247 LTAGIGSDHIXXXXXXXXXXXXXXXXXSNTVSVAEDQLMRILVLMRN 387 AG+G D+I NT+S AE I LMR+ Sbjct: 67 GRAGVGVDNIDIDEATKHGVIVINAPNGNTISTAEHTFAMISSLMRH 113
>RPOC_NOCFA (Q5YPE1) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1317 Score = 28.9 bits (63), Expect = 5.0 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Frame = +1 Query: 7 KGGEHAGQNPNFVGCVENALGIRSWLESQGHQ---YIVTDDKDGPNCELEKHMADAHVLI 177 +GGE A P +G + +L SWL + Q ++TD NC +K + +I Sbjct: 1196 EGGEPASGRPVLMGITKASLATDSWLSAASFQETTRVLTD--AAINCRSDKLIGLKENVI 1253 Query: 178 ITPFHPAYVSADRIR 222 I PA +R R Sbjct: 1254 IGKLIPAGTGINRYR 1268
>GLMS_CLOAB (Q97MN6) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 607 Score = 28.9 bits (63), Expect = 5.0 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 4/56 (7%) Frame = +1 Query: 46 GCVENALGIRSWLESQGHQY-IVTDDKDGPNCE---LEKHMADAHVLIITPFHPAY 201 G +EN + +R+WL+S+G+++ TD + PN E ++ DA + I+ +Y Sbjct: 100 GIIENYMQLRTWLKSKGYEFKSETDTEVIPNLVDYFYEGNLLDAVIKAISKVEGSY 155
>PROA_METCA (Q606Y1) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 430 Score = 28.9 bits (63), Expect = 5.0 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%) Frame = -2 Query: 375 DEDAHQLVLRHRHRVAARDLGDGEPRGRRRGQLDVVGADPRREEQL-----QVLAAPDP 214 +E A L+ +R +DL G +G R QL+ +G D +R + + ++ A PDP Sbjct: 53 EESADALIEENR-----KDLEAGAAKGLDRAQLERLGVDAKRVQTMAVGLREIAALPDP 106
>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) (Fragment) Length = 526 Score = 24.3 bits (51), Expect(2) = 6.5 Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 1/16 (6%) Frame = +3 Query: 369 PRPHAQLPAGPPP-GH 413 P PH P GPPP GH Sbjct: 377 PPPHGHPPHGPPPHGH 392 Score = 22.7 bits (47), Expect(2) = 6.5 Identities = 15/54 (27%), Positives = 15/54 (27%) Frame = +3 Query: 93 GPPVHRHRRQGRPQLXXXXXXXXXXXXXXXXVPPGVRERGPDQARQEPGAAPHG 254 GPP H H G P P G GP G PHG Sbjct: 337 GPPPHGHHPHGPP-------------------PHGHPPHGPPPRHPPHGPPPHG 371
>GLMS_CLOTE (Q890U2) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 607 Score = 28.5 bits (62), Expect = 6.6 Identities = 9/27 (33%), Positives = 18/27 (66%) Frame = +1 Query: 46 GCVENALGIRSWLESQGHQYIVTDDKD 126 G +EN + +R WL S+G++++ D + Sbjct: 100 GIIENYIELREWLTSEGYKFVSETDTE 126
>SECF_STRCO (Q53956) Protein-export membrane protein secF| Length = 373 Score = 28.5 bits (62), Expect = 6.6 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -2 Query: 384 AHEDEDAHQLVLRHRHRVAARDLGDGEPRGRRR 286 A E +DA V+ R++ A+R G G P G+RR Sbjct: 341 ADEPDDAAPAVVGPRNQPASRGRGRGRPSGKRR 373
>CP2B5_RABIT (P12789) Cytochrome P450 2B5 (EC 1.14.14.1) (CYPIIB5) (P450 type| B2) (P450 form HP1) Length = 491 Score = 28.5 bits (62), Expect = 6.6 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = +3 Query: 366 HPRPHAQLPAGPPP 407 HP+ H +LP GPPP Sbjct: 23 HPKAHGRLPPGPPP 36
>NHL1_CAEEL (Q03601) RING finger protein nhl-1| Length = 974 Score = 28.1 bits (61), Expect = 8.6 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -2 Query: 375 DEDAHQL-VLRHRHRVAARDLGDGEPRGRRRGQLDVVGA 262 DE+ +L VLR R R A+R+ G+ RGR R GA Sbjct: 669 DEEKEKLAVLRQRGRSASREAGEWRARGRPRAVFGRKGA 707
>HIS52_NITWN (Q3SPZ6) Imidazole glycerol phosphate synthase subunit hisH 2 (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit 2) (IGP synthase subunit hisH 2) (ImGP synthase subunit hisH 2) (IGPS subunit hisH 2) Length = 212 Score = 28.1 bits (61), Expect = 8.6 Identities = 20/70 (28%), Positives = 35/70 (50%) Frame = +1 Query: 52 VENALGIRSWLESQGHQYIVTDDKDGPNCELEKHMADAHVLIITPFHPAYVSADRIRRGK 231 + N +R+ +E GH+ +VT DG +ADA +I+ P A+ A + R + Sbjct: 11 INNVRSVRNAVEYCGHEAVVTHGNDG--------IADASHIIL-PGVGAFGDAMKKIRDR 61 Query: 232 NLELLLTAGI 261 L+ +L G+ Sbjct: 62 GLDEILARGV 71 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,887,184 Number of Sequences: 219361 Number of extensions: 804413 Number of successful extensions: 3314 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 3151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3305 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
