>HRB3_XANCV (P80152) Protein hrpB3 precursor|
          Length = 253

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 400 APPRPTRWPWSGPCRAGRC 344
           APPRP+ WPW   C    C
Sbjct: 202 APPRPSPWPWLAGCALALC 220

>CHER1_VIBCH (Q9KQ06) Chemotaxis protein methyltransferase 1 (EC 2.1.1.80)|
          Length = 275

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = -2

Query: 278 RMVRFWSA----GQAPYQIGWTVMSA--ARTGPMWYSSLTRSDDPSNFLDAPRA 135
           R ++ WSA    GQ PY +  T++     R G +   S+T +D  ++ LD  RA
Sbjct: 103 RPIKIWSAASSSGQEPYSMAMTILEVQQKRPGLLPSVSITATDISASMLDMCRA 156

>CHER_VIBPA (Q9X9K2) Chemotaxis protein methyltransferase (EC 2.1.1.80)|
          Length = 275

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = -2

Query: 278 RMVRFWSA----GQAPYQIGWTVMSAARTGP--MWYSSLTRSDDPSNFLDAPRA 135
           R ++ WSA    GQ PY I  T++   +  P  +   S+T +D  ++ L+  RA
Sbjct: 103 RPIKIWSAASSSGQEPYSIAMTILETQQRKPGLLPSVSITATDISASMLEMCRA 156

>CHER_VIBAN (Q57508) Chemotaxis protein methyltransferase (EC 2.1.1.80)|
          Length = 275

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
 Frame = -2

Query: 278 RMVRFWSA----GQAPYQIGWTVMSAARTGPMWYSS--LTRSDDPSNFLDAPRA 135
           R ++ WSA    GQ PY +  TV+   +  P    S  +T +D  ++ LD  +A
Sbjct: 103 RPIKIWSAASSSGQEPYSMAMTVLETQQRKPGMLPSVAITATDISASMLDMCKA 156


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,889,100
Number of Sequences: 219361
Number of extensions: 350168
Number of successful extensions: 1355
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)