ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast59e03 |
|---|---|
| Clone Library Name | barley_pub |
>SMD3_XENLA (P62323) Small nuclear ribonucleoprotein Sm D3 (snRNP core protein| D3) (Sm-D3) Length = 126 Score = 133 bits (335), Expect = 9e-32 Identities = 58/94 (61%), Positives = 78/94 (82%) Frame = +1 Query: 13 SLGIPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHV 192 S+G+P+K+LHEA GH+VT E TGEVYRG +IE EDN NCQ+ NIT T +DG+V+QLE V Sbjct: 2 SIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQV 61 Query: 193 FIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGS 294 +IRGS++RF+I+PDMLKNAPM K ++ + +G G+ Sbjct: 62 YIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGA 95
>SMD3_MOUSE (P62320) Small nuclear ribonucleoprotein Sm D3 (snRNP core protein| D3) (Sm-D3) Length = 126 Score = 133 bits (335), Expect = 9e-32 Identities = 58/94 (61%), Positives = 78/94 (82%) Frame = +1 Query: 13 SLGIPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHV 192 S+G+P+K+LHEA GH+VT E TGEVYRG +IE EDN NCQ+ NIT T +DG+V+QLE V Sbjct: 2 SIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQV 61 Query: 193 FIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGS 294 +IRGS++RF+I+PDMLKNAPM K ++ + +G G+ Sbjct: 62 YIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGA 95
>SMD3_HUMAN (P62318) Small nuclear ribonucleoprotein Sm D3 (snRNP core protein| D3) (Sm-D3) Length = 126 Score = 133 bits (335), Expect = 9e-32 Identities = 58/94 (61%), Positives = 78/94 (82%) Frame = +1 Query: 13 SLGIPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHV 192 S+G+P+K+LHEA GH+VT E TGEVYRG +IE EDN NCQ+ NIT T +DG+V+QLE V Sbjct: 2 SIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQV 61 Query: 193 FIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGS 294 +IRGS++RF+I+PDMLKNAPM K ++ + +G G+ Sbjct: 62 YIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGA 95
>SMD3_DROME (O44437) Small nuclear ribonucleoprotein SM D3 (snRNP core protein| D3) (SM-D3) Length = 151 Score = 124 bits (311), Expect = 5e-29 Identities = 53/84 (63%), Positives = 71/84 (84%) Frame = +1 Query: 13 SLGIPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHV 192 S+G+P+K+LHEA GH++T E TGEVYRG +IE EDN NCQ+ IT T +DG+ + LE+V Sbjct: 2 SIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDGRTANLENV 61 Query: 193 FIRGSRVRFMIIPDMLKNAPMFKR 264 +IRGS++RF+I+PDMLKNAPMFK+ Sbjct: 62 YIRGSKIRFLILPDMLKNAPMFKK 85
>SMD3_CAEEL (Q17348) Small nuclear ribonucleoprotein Sm D3 (snRNP core protein| D3) (Sm-D3) Length = 136 Score = 120 bits (301), Expect = 8e-28 Identities = 58/110 (52%), Positives = 77/110 (70%), Gaps = 15/110 (13%) Frame = +1 Query: 13 SLGIPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHV 192 S+G+P+K+LHEA GH+VT+E TGEVYRG + E EDN NCQ+ T +DG+ QL++V Sbjct: 3 SVGVPIKILHEAEGHMVTLETVTGEVYRGKLSEAEDNMNCQLAETVVTFRDGRSHQLDNV 62 Query: 193 FIRGSRVRFMIIPDMLKNAPMFKR---------------LEARIRGKGSA 297 FIRG+++RFMI+PDMLKNAPMFK L+ R RG+G+A Sbjct: 63 FIRGNKIRFMILPDMLKNAPMFKNIGRAQKGAIGMGLGGLDQRGRGRGTA 112
>SMD3_SCHPO (Q9UUC6) Probable small nuclear ribonucleoprotein Sm D3 (snRNP core| protein D3) (Sm-D3) Length = 97 Score = 115 bits (288), Expect = 3e-26 Identities = 49/82 (59%), Positives = 67/82 (81%) Frame = +1 Query: 16 LGIPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVF 195 + + +KLLHE GH+VT+EL+ G YRG +IE EDN NCQ+ +I+ TA+DG+VS L+ V+ Sbjct: 1 MSLCIKLLHETQGHIVTMELENGSTYRGKLIEAEDNMNCQMRDISVTARDGRVSHLDQVY 60 Query: 196 IRGSRVRFMIIPDMLKNAPMFK 261 IRGS +RF+I+PDML+NAPMFK Sbjct: 61 IRGSHIRFLIVPDMLRNAPMFK 82
>SMD3_YEAST (P43321) Small nuclear ribonucleoprotein Sm D3 (snRNP core protein| D3) (Sm-D3) Length = 101 Score = 103 bits (257), Expect = 1e-22 Identities = 42/86 (48%), Positives = 67/86 (77%) Frame = +1 Query: 19 GIPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVFI 198 GIPVKLL+EA GH+V++EL TG YRG ++E ED+ N Q+ ++ T G V+ ++ +F+ Sbjct: 5 GIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFV 64 Query: 199 RGSRVRFMIIPDMLKNAPMFKRLEAR 276 RGS+++F+++PD+LKNAP+FK+ +R Sbjct: 65 RGSQIKFIVVPDLLKNAPLFKKNSSR 90
>LSM4_MOUSE (Q9QXA5) U6 snRNA-associated Sm-like protein LSm4| Length = 137 Score = 62.0 bits (149), Expect = 3e-10 Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 2/92 (2%) Frame = +1 Query: 22 IPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNW-NCQIENITFTAKDG-KVSQLEHVF 195 +P+ LL A H + VELK GE Y G ++ C DNW N + + T++DG K ++ + Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSC-DNWMNINLREVICTSRDGDKFWRMPECY 60 Query: 196 IRGSRVRFMIIPDMLKNAPMFKRLEARIRGKG 291 IRGS ++++ IPD + M + A+ RG+G Sbjct: 61 IRGSTIKYLRIPDEI--IDMVREEAAKGRGRG 90
>LSM4_HUMAN (Q9Y4Z0) U6 snRNA-associated Sm-like protein LSm4 (Glycine-rich| protein) (GRP) Length = 139 Score = 60.5 bits (145), Expect = 1e-09 Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 2/92 (2%) Frame = +1 Query: 22 IPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNW-NCQIENITFTAKDG-KVSQLEHVF 195 +P+ LL A H + VELK GE Y G ++ C DNW N + + T++DG K ++ + Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSC-DNWMNINLREVICTSRDGDKFWRMPECY 60 Query: 196 IRGSRVRFMIIPDMLKNAPMFKRLEARIRGKG 291 IRGS ++++ IPD + + + + + A+ RG+G Sbjct: 61 IRGSTIKYLRIPDEIIDM-VKEEVVAKGRGRG 91
>LSM4_ORYSA (Q9LGE6) Probable U6 snRNA-associated Sm-like protein LSm4| Length = 147 Score = 59.7 bits (143), Expect = 2e-09 Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Frame = +1 Query: 22 IPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDG-KVSQLEHVFI 198 +P+ LL A GH + VELK GE Y G ++ C+ N + + T+KDG K ++ +I Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECYI 61 Query: 199 RGSRVRFMIIPD 234 RG+ ++++ +PD Sbjct: 62 RGNTIKYLRVPD 73
>LSM4_FAGSY (Q9ZRU9) Probable U6 snRNA-associated Sm-like protein LSm4| (Glycine-rich protein 2) Length = 148 Score = 58.5 bits (140), Expect = 4e-09 Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%) Frame = +1 Query: 22 IPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDG-KVSQLEHVFI 198 +P+ LL A GH + VELK+GE Y G ++ C+ N + + T+KDG + ++ +I Sbjct: 2 LPLSLLKTAQGHPMLVELKSGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPDCYI 61 Query: 199 RGSRVRFMIIPD 234 RG+ ++++ +PD Sbjct: 62 RGNTIKYLRVPD 73
>LSM4_CAEEL (Q19952) Probable U6 snRNA-associated Sm-like protein LSm4| Length = 123 Score = 58.5 bits (140), Expect = 4e-09 Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Frame = +1 Query: 22 IPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDG-KVSQLEHVFI 198 +P+ LL A H + VELK GE Y G + C+ N + ++ FT+KDG K ++ ++ Sbjct: 3 LPLSLLKTAQNHPMLVELKNGETYNGHLKACDSWMNIHLVDVIFTSKDGDKFFKMSEAYV 62 Query: 199 RGSRVRFMIIPD 234 RGS ++++ IP+ Sbjct: 63 RGSTIKYLRIPE 74
>LSM4_TOBAC (Q43582) Probable U6 snRNA-associated Sm-like protein LSm4| (Glycine-rich protein 10) (GRP 10) Length = 146 Score = 58.2 bits (139), Expect = 5e-09 Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Frame = +1 Query: 22 IPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDG-KVSQLEHVFI 198 +P+ LL A GH + VELK GE Y G ++ C+ N + + T+KDG + ++ ++ Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYV 61 Query: 199 RGSRVRFMIIPD 234 RG+ ++++ +PD Sbjct: 62 RGNTIKYLRVPD 73
>LSM4_SCHPO (O14352) Probable U6 snRNA-associated Sm-like protein LSm4| Length = 121 Score = 50.8 bits (120), Expect = 8e-07 Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Frame = +1 Query: 22 IPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDG-KVSQLEHVFI 198 +P+ LL+ G + VELK GE + G + C++ N + + T DG K +L +I Sbjct: 2 LPLTLLNATQGRPILVELKNGETFNGHLENCDNYMNLTLREVIRTMPDGDKFFRLPECYI 61 Query: 199 RGSRVRFMIIPDML------KNAPMFKRLEARIRGKG 291 RG+ ++++ I D + + A + +R RG+G Sbjct: 62 RGNNIKYLRIQDEVLSQVAKQQAQQRENRGSRFRGRG 98
>SMD1_MOUSE (P62315) Small nuclear ribonucleoprotein Sm D1 (snRNP core protein| D1) (Sm-D1) (Sm-D autoantigen) Length = 119 Score = 50.4 bits (119), Expect = 1e-06 Identities = 25/87 (28%), Positives = 48/87 (55%) Frame = +1 Query: 28 VKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVFIRGS 207 V+ L + + VT+ELK G G++ + + N ++ + T K+ + QLE + IRG+ Sbjct: 4 VRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGN 63 Query: 208 RVRFMIIPDMLKNAPMFKRLEARIRGK 288 +R+ I+PD L + +E +++ K Sbjct: 64 NIRYFILPDSLPLDTLLVDVEPKVKSK 90
>SMD1_HUMAN (P62314) Small nuclear ribonucleoprotein Sm D1 (snRNP core protein| D1) (Sm-D1) (Sm-D autoantigen) Length = 119 Score = 50.4 bits (119), Expect = 1e-06 Identities = 25/87 (28%), Positives = 48/87 (55%) Frame = +1 Query: 28 VKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVFIRGS 207 V+ L + + VT+ELK G G++ + + N ++ + T K+ + QLE + IRG+ Sbjct: 4 VRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGN 63 Query: 208 RVRFMIIPDMLKNAPMFKRLEARIRGK 288 +R+ I+PD L + +E +++ K Sbjct: 64 NIRYFILPDSLPLDTLLVDVEPKVKSK 90
>LSM10_MOUSE (Q8QZX5) U7 snRNA-associated Sm-like protein LSm10| Length = 122 Score = 45.4 bits (106), Expect = 3e-05 Identities = 22/67 (32%), Positives = 38/67 (56%) Frame = +1 Query: 34 LLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVFIRGSRV 213 LL G + TV+L+ V RG + + N ++ N+T+T + G +L+ +F+ G V Sbjct: 20 LLQGLQGQITTVDLRDESVARGRIDNVDAFMNIRLANVTYTDRWGHQVELDDLFVTGRNV 79 Query: 214 RFMIIPD 234 R++ IPD Sbjct: 80 RYVHIPD 86
>SMD1_SCHPO (O42661) Probable small nuclear ribonucleoprotein Sm D1 (snRNP core| protein D1) (Sm-D1) Length = 117 Score = 45.1 bits (105), Expect = 4e-05 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 9/97 (9%) Frame = +1 Query: 28 VKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVFIRGS 207 V+ L + V++ELK G + G++ + N ++ + T K + +E + IRG+ Sbjct: 4 VRFLMKLTNETVSIELKNGTIVHGTITSVDMQMNTHLKAVKMTVKGREPVPVETLSIRGN 63 Query: 208 RVRFMIIPDML---------KNAPMFKRLEARIRGKG 291 +R+ I+PD L P K+ E +RG+G Sbjct: 64 NIRYYILPDSLPLDTLLIDDSTKPKQKKKEV-VRGRG 99
>SMD1_DROME (Q9VU02) Probable small nuclear ribonucleoprotein Sm D1 (snRNP core| protein D1) (Sm-D1) Length = 124 Score = 44.7 bits (104), Expect = 6e-05 Identities = 22/71 (30%), Positives = 39/71 (54%) Frame = +1 Query: 28 VKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVFIRGS 207 V+ L + + VT+ELK G G++ + N ++++ T K+ LE + IRG+ Sbjct: 4 VRFLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPVHLETLSIRGN 63 Query: 208 RVRFMIIPDML 240 +R+ I+PD L Sbjct: 64 NIRYFILPDSL 74
>SMD1_CAEEL (Q10013) Probable small nuclear ribonucleoprotein Sm D1 (snRNP core| protein D1) (Sm-D1) Length = 126 Score = 42.7 bits (99), Expect = 2e-04 Identities = 20/71 (28%), Positives = 41/71 (57%) Frame = +1 Query: 28 VKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVFIRGS 207 V+ L + + V +ELK G G+++ + N + ++ T K+ + +L+ + IRG+ Sbjct: 4 VRFLMKLSHETVNIELKNGTQVSGTIMGVDVAMNTHLRAVSMTVKNKEPVKLDTLSIRGN 63 Query: 208 RVRFMIIPDML 240 +R++I+PD L Sbjct: 64 NIRYIILPDPL 74
>LSM4_YEAST (P40070) U6 snRNA-associated Sm-like protein LSm4| Length = 187 Score = 42.4 bits (98), Expect = 3e-04 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 12/83 (14%) Frame = +1 Query: 22 IPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNW-NCQIENIT-----------FTAKD 165 +P+ LL A G + +ELK GE+ +G + DNW N + N+T A+ Sbjct: 2 LPLYLLTNAKGQQMQIELKNGEIIQGILTNV-DNWMNLTLSNVTEYSEESAINSEDNAES 60 Query: 166 GKVSQLEHVFIRGSRVRFMIIPD 234 K +L ++IRG+ ++F+ + D Sbjct: 61 SKAVKLNEIYIRGTFIKFIKLQD 83
>LSM10_HUMAN (Q969L4) U7 snRNA-associated Sm-like protein LSm10| Length = 123 Score = 41.2 bits (95), Expect = 6e-04 Identities = 21/67 (31%), Positives = 36/67 (53%) Frame = +1 Query: 34 LLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVFIRGSRV 213 LL G V TV+L+ V G + + N ++ +T+T + G +L+ +F+ G V Sbjct: 20 LLQGLQGRVTTVDLRDESVAHGRIDNVDAFMNIRLAKVTYTDRWGHQVKLDDLFVTGRNV 79 Query: 214 RFMIIPD 234 R++ IPD Sbjct: 80 RYVHIPD 86
>RPTN_MOUSE (P97347) Repetin| Length = 1130 Score = 37.0 bits (84), Expect = 0.011 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Frame = +3 Query: 96 GLHDRV--RGQLELPDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPR 269 G HD+ +GQ D+ H KGRQ +++ HQGQ+G+ P Q+ H Q+P Sbjct: 695 GRHDQSPHQGQKGRHDQSPHQGQKGRQDLSS----HQGQKGRQDQSPHLGQKGRHDQSPH 750 Query: 270 GQDKGQ 287 KG+ Sbjct: 751 RGQKGR 756 Score = 34.3 bits (77), Expect = 0.074 Identities = 20/58 (34%), Positives = 28/58 (48%) Frame = +3 Query: 114 RGQLELPDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRGQDKGQ 287 +GQ D H KGRQ ++ HQGQ+G+ P Q+ H Q+P KG+ Sbjct: 655 QGQKGRQDLSSHQGQKGRQDLSP----HQGQKGRQDQSPHLGQKGRHDQSPHQGQKGR 708 Score = 32.3 bits (72), Expect = 0.28 Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Frame = +3 Query: 96 GLHDRV--RGQLELPDREHHIHSKGRQGVAAGARLHQGQ-QGQVHDHPRHAQERPHVQAP 266 G HD+ RGQ D+ H KGRQ ++ HQGQ +GQ + H +R Sbjct: 743 GRHDQSPHRGQKGRQDQSPHQGQKGRQDQSS----HQGQREGQEQNSHWHRTDRQGQSFH 798 Query: 267 RGQDKGQGV 293 GQ GQG+ Sbjct: 799 YGQTGGQGL 807 Score = 31.6 bits (70), Expect = 0.48 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = +3 Query: 117 GQLELPDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRGQDKGQ 287 GQ D+ H KGRQ + HQGQ+G+ P Q+ Q+P KG+ Sbjct: 344 GQKGRQDQSPHRGQKGRQDQSP----HQGQKGRQDQSPHRGQKGRQDQSPHQGQKGR 396 Score = 30.8 bits (68), Expect = 0.82 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = +3 Query: 114 RGQLELPDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRGQDKGQ 287 +GQ D H KGRQ + H GQ+G+ P Q+ H Q+P KG+ Sbjct: 667 QGQKGRQDLSPHQGQKGRQDQSP----HLGQKGRHDQSPHQGQKGRHDQSPHQGQKGR 720 Score = 30.8 bits (68), Expect = 0.82 Identities = 18/58 (31%), Positives = 27/58 (46%) Frame = +3 Query: 114 RGQLELPDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRGQDKGQ 287 +GQ D+ H+ KGRQ + HQGQ+G+ P Q+ Q+ KG+ Sbjct: 391 QGQKGRQDQSPHLGQKGRQDQSP----HQGQKGRQDQSPHQGQKGRQDQSSHQGQKGR 444 Score = 30.8 bits (68), Expect = 0.82 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = +3 Query: 114 RGQLELPDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRGQDKGQ 287 RGQ D+ H KGRQ + H GQ+G+ P Q+ Q+P KG+ Sbjct: 379 RGQKGRQDQSPHQGQKGRQDQSP----HLGQKGRQDQSPHQGQKGRQDQSPHQGQKGR 432 Score = 30.8 bits (68), Expect = 0.82 Identities = 19/58 (32%), Positives = 27/58 (46%) Frame = +3 Query: 114 RGQLELPDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRGQDKGQ 287 +GQ D+ H KGRQ + HQGQ+G+ P Q+ Q+P KG+ Sbjct: 367 QGQKGRQDQSPHRGQKGRQDQSP----HQGQKGRQDQSPHLGQKGRQDQSPHQGQKGR 420 Score = 29.6 bits (65), Expect = 1.8 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Frame = +3 Query: 96 GLHDRV--RGQLELPDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPR 269 G HD+ +GQ D H KGRQ + H GQ+G+ P Q+ Q+P Sbjct: 707 GRHDQSPHQGQKGRQDLSSHQGQKGRQDQSP----HLGQKGRHDQSPHRGQKGRQDQSPH 762 Query: 270 GQDKGQ 287 KG+ Sbjct: 763 QGQKGR 768 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +3 Query: 114 RGQLELPDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQE-RPHVQAPRGQDKGQ 287 +GQ D+ H KGRQ ++ HQGQ+G+ Q+ R + +GQ +GQ Sbjct: 427 QGQKGRQDQSSHQGQKGRQDQSS----HQGQKGRQDQSSHQGQKGRQDQSSHQGQREGQ 481 Score = 27.3 bits (59), Expect = 9.1 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +3 Query: 114 RGQLELPDREHHIHSKGRQGVAAGARLHQGQ-QGQVHDHPRHAQERPHVQAPRGQDKGQG 290 +GQ D+ H KGRQ ++ HQGQ +GQ + H + GQ GQG Sbjct: 451 QGQKGRQDQSSHQGQKGRQDQSS----HQGQREGQDQNSQWHRTDSQGQSFHYGQTGGQG 506 Query: 291 V 293 + Sbjct: 507 L 507 Score = 27.3 bits (59), Expect = 9.1 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Frame = +3 Query: 114 RGQLELPDREHHIHSKGRQGVAAGARLHQGQQGQ----VHDHPRHAQERPHVQAPRG-QD 278 +GQ D+ H KGRQ ++ HQGQ+G+ H + Q++ Q +G QD Sbjct: 415 QGQKGRQDQSPHQGQKGRQDQSS----HQGQKGRQDQSSHQGQKGRQDQSSHQGQKGRQD 470 Query: 279 KGQGVGHR 302 + G R Sbjct: 471 QSSHQGQR 478
>AGO2_DROME (Q9VUQ5) Argonaute 2 protein| Length = 1214 Score = 35.0 bits (79), Expect = 0.044 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = +3 Query: 132 PDREHHIHSKGRQGVAAGARLHQ-GQQGQVHDHPRHAQERPHVQAPRGQDKGQGVGHRR 305 P ++ H +GRQG G + GQQ H+ R QE + Q P GQ +G GH++ Sbjct: 253 PGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHEQGRQGQEGGYQQRPSGQQQG---GHQQ 308 Score = 34.7 bits (78), Expect = 0.057 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +3 Query: 132 PDREHHIHSKGRQGVAAGARLH-QGQQGQVHDHPRHAQERPHVQAPRGQDKGQGVGHRR 305 P ++ H +GRQG G + GQQ H R QE + Q P GQ +G GH++ Sbjct: 276 PGQQQGGHEQGRQGQEGGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQG---GHQQ 331 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 13/64 (20%) Frame = +3 Query: 132 PDREHHIHSKGRQGVAAGARLH-------------QGQQGQVHDHPRHAQERPHVQAPRG 272 P ++ H +GRQG G + QGQ+G P Q+ H Q +G Sbjct: 138 PGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGRQG 197 Query: 273 QDKG 284 Q+ G Sbjct: 198 QEGG 201 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 13/64 (20%) Frame = +3 Query: 132 PDREHHIHSKGRQGVAAGARLH-------------QGQQGQVHDHPRHAQERPHVQAPRG 272 P ++ H +GRQG G + QGQ+G P Q+ H Q +G Sbjct: 207 PGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHQQGRQG 266 Query: 273 QDKG 284 Q+ G Sbjct: 267 QEGG 270 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 13/57 (22%) Frame = +3 Query: 153 HSKGRQGVAAGARLH-------------QGQQGQVHDHPRHAQERPHVQAPRGQDKG 284 H +GRQG G + QGQ+G P Q+ H Q +GQ+ G Sbjct: 306 HQQGRQGQEGGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGRQGQEGG 362 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 13/57 (22%) Frame = +3 Query: 153 HSKGRQGVAAGARLH-------------QGQQGQVHDHPRHAQERPHVQAPRGQDKG 284 H +GRQG G + QGQ+G P Q+ H Q +GQ+ G Sbjct: 191 HQQGRQGQEGGYQQRPPGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGRQGQEGG 247
>PCSK9_HUMAN (Q8NBP7) Proprotein convertase subtilisin/kexin type 9 precursor| (EC 3.4.21.-) (Proprotein convertase PC9) (Subtilisin/kexin-like protease PC9) (Neural apoptosis-regulated convertase 1) (NARC-1) Length = 692 Score = 34.7 bits (78), Expect = 0.057 Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 11/82 (13%) Frame = +3 Query: 129 LPDREHHIHSKGRQGVAAGARLHQGQQG----------QVHDHPRHAQERPHVQAPRGQD 278 LP +H+ + G R+H QQG +V D H +P V PRGQ Sbjct: 529 LPQANCSVHTAPPAEASMGTRVHCHQQGHVLTGCSSHWEVEDLGTH---KPPVLRPRGQ- 584 Query: 279 KGQGVGHRRWA-RPRCCHACPG 341 Q VGHR + CCHA PG Sbjct: 585 PNQCVGHREASIHASCCHA-PG 605
>DNAA_COREF (Q8FUL7) Chromosomal replication initiator protein dnaA| Length = 573 Score = 33.9 bits (76), Expect = 0.097 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +3 Query: 183 GARLHQGQQGQVHDHPRHAQERPHVQAPRGQDKGQGVGHR 302 G + QGQQGQ HP + R H AP Q + Q H+ Sbjct: 121 GPQSPQGQQGQQGQHPVQQEVRAHAPAPHQQGQHQAAQHQ 160
>LSM2_SCHPO (O94408) U6 snRNA-associated Sm-like protein LSm2| Length = 96 Score = 32.7 bits (73), Expect = 0.22 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Frame = +1 Query: 61 VTVELKTGEVYRGSMIECEDNWNCQIENITF--TAKDGKVSQLEHVFIRGSRVRFM 222 VTVELK RG + + N ++ENI+ +K ++ ++ +FIRGS VR++ Sbjct: 15 VTVELKNDMSIRGILKSVDQFLNVKLENISVVDASKYPHMAAVKDLFIRGSVVRYV 70
>LSM2_YEAST (P38203) U6 snRNA-associated Sm-like protein LSm2 (Small nuclear| ribonucleoprotein D homolog SNP3) Length = 95 Score = 32.3 bits (72), Expect = 0.28 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Frame = +1 Query: 61 VTVELKTGEVYRGSMIECEDNWNCQIENITFT--AKDGKVSQLEHVFIRGSRVRFMII 228 V VELK +G++ + N +++NI+ T K + + ++FIRGS VR++ + Sbjct: 15 VVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPHLGSVRNIFIRGSTVRYVYL 72
>ADAM2_CAVPO (Q60411) ADAM 2 precursor (A disintegrin and metalloproteinase| domain 2) (Fertilin beta subunit) (PH-30) (PH30) Length = 735 Score = 32.0 bits (71), Expect = 0.37 Identities = 23/61 (37%), Positives = 31/61 (50%) Frame = +1 Query: 13 SLGIPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHV 192 SLG P+K E +G +TV K V RGS +E E ++ IEN T+ + L H Sbjct: 13 SLGGPLKKYVENSGMQITVPEKIRSVKRGS-VESEVSYKIVIENTTYIVNLVRKMFLPHD 71 Query: 193 F 195 F Sbjct: 72 F 72
>KE4_BRARE (Q9PUB8) Zinc transporter Slc39a7 (Solute carrier family 39 member| 7) (Histidine-rich membrane protein Ke4) (Fragment) Length = 352 Score = 31.6 bits (70), Expect = 0.48 Identities = 17/53 (32%), Positives = 23/53 (43%) Frame = +3 Query: 135 DREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRGQDKGQGV 293 + EHH+H G A H G +HDH HA + H G +K + V Sbjct: 63 EEEHHVHDHGHTHDHAHDHGHAHSHGDIHDH-GHAHKHGHAH-DHGAEKSKKV 113
>SYS_THEMA (Q9X199) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 425 Score = 31.2 bits (69), Expect = 0.63 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +3 Query: 249 PHVQAPRGQDKGQGVGHRRWARPR 320 PH P G+D+ Q V RRW PR Sbjct: 110 PHESVPVGEDESQNVEVRRWGEPR 133
>CNC_DROME (P20482) Segmentation protein cap'n'collar| Length = 1383 Score = 31.2 bits (69), Expect = 0.63 Identities = 17/54 (31%), Positives = 25/54 (46%) Frame = +3 Query: 126 ELPDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRGQDKGQ 287 + P H H Q V G Q QQ ++ P H Q++ H+Q+ + Q GQ Sbjct: 1325 QAPMHSHQSHGMQAQHVVGGMSQQQQQQSRL---PPHLQQQHHLQSQQQQPGGQ 1375
>KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precursor (KAHRP)| Length = 657 Score = 30.8 bits (68), Expect = 0.82 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Frame = +3 Query: 102 HDRVRGQLELPDREHHIHSKGRQGVAAGARLHQGQQGQ--VHDHPRHAQERPHVQAPRG 272 H + + + P + HH H G A ++HQ GQ H H H H Q P+G Sbjct: 72 HHQHQAPHQAPHQAHHHHHHGEVNHQA-PQVHQQVHGQDQAHHHHHHHHHHLHPQQPQG 129
>VE1_HPV59 (Q81966) Replication protein E1 (EC 3.6.1.-) (ATP-dependent| helicase E1) Length = 644 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 82 GEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEH 189 G V S I+C D+ N +ENI T+ ++ QL H Sbjct: 158 GSVCSDSQIDCSDSSNMDVENIVPTSPTNQLLQLLH 193
>GLT3_WHEAT (P08488) Glutenin, high molecular weight subunit 12 precursor| Length = 660 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%) Frame = +3 Query: 123 LELPDREHHIHSKGRQGV--------AAGARLHQGQQGQVHDHPRHAQERPHVQAPRGQD 278 L+ P + I KG+QG G ++ QGQQG P+H +R Q +GQ Sbjct: 173 LQQPGQGQQI-GKGKQGYYPTSLQQPGQGQQIGQGQQGYYPTSPQHTGQRQ--QPVQGQQ 229 Query: 279 KGQG 290 GQG Sbjct: 230 IGQG 233
>TF2AA_PONPY (Q5RCU0) Transcription initiation factor IIA subunit 1 (General| transcription factor IIA1) [Contains: Transcription initiation factor IIA alpha chain (TFIIA p35 subunit); Transcription initiation factor IIA beta chain (TFIIA p19 subunit)] Length = 376 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +3 Query: 153 HSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPR 269 HS+ +Q + + HQ QQ Q H H H Q +P P+ Sbjct: 60 HSEEQQLLLQVQQQHQPQQQQHHHHHHHQQAQPQQTVPQ 98
>TF2AA_HUMAN (P52655) Transcription initiation factor IIA subunit 1 (General| transcription factor IIA1) (TFIIA-42) (TFIIAL) [Contains: Transcription initiation factor IIA alpha chain (TFIIA p35 subunit); Transcription initiation factor IIA beta chain (TFI Length = 376 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +3 Query: 153 HSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPR 269 HS+ +Q + + HQ QQ Q H H H Q +P P+ Sbjct: 60 HSEEQQLLLQVQQQHQPQQQQHHHHHHHQQAQPQQTVPQ 98
>RIMM_MYCLE (O33016) Probable 16S rRNA-processing protein rimM| Length = 179 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +1 Query: 4 MSRSLGIPVKLLHEAAGHVVTVELKTGEV 90 M R +G+ ++LH AAG ++ V +GEV Sbjct: 121 MGRDVGVVAEVLHTAAGELLAVRCDSGEV 149
>RUXX_METMA (Q8PZZ9) Putative snRNP Sm-like protein| Length = 72 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/66 (27%), Positives = 31/66 (46%) Frame = +1 Query: 25 PVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVFIRG 204 P+ +L+ A V V LK +RG + + + N ++N + VS+ V IRG Sbjct: 5 PLDILNNALDTPVIVRLKGAREFRGELKGYDIHMNLVLDNAEELREGEVVSKFSSVVIRG 64 Query: 205 SRVRFM 222 V ++ Sbjct: 65 DNVVYV 70
>DSX_DROME (P23023) Protein doublesex| Length = 549 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 8/59 (13%) Frame = +3 Query: 144 HHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQ--------APRGQDKGQGVG 296 HH+H + HQ H H ++ + PH Q +P D G VG Sbjct: 188 HHVHMAAAAAASVAQHQHQSHPHSHHHHHQNHHQHPHQQPATQTALRSPPHSDHGGSVG 246
>TF2AA_RAT (O08949) Transcription initiation factor IIA subunit 1 (General| transcription factor IIA1) [Contains: Transcription initiation factor IIA alpha chain (TFIIA p35 subunit); Transcription initiation factor IIA beta chain (TFIIA p19 subunit)] Length = 377 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +3 Query: 153 HSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPR 269 HS+ +Q + + HQ QQ Q H H H Q +P P+ Sbjct: 60 HSEEQQLLLQVQQQHQPQQQQHHHHHHHQQAQPQQTVPQ 98
>ATS18_MOUSE (Q4VC17) ADAMTS-18 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 18) (ADAM-TS 18) (ADAM-TS18) Length = 1219 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/61 (26%), Positives = 23/61 (37%) Frame = +3 Query: 144 HHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRGQDKGQGVGHRRWARPRC 323 HH H ++ R +Q G +P H+ P P Q + HRRW + Sbjct: 197 HHPHVLYKRTAEKRVRWYQDYPGSQRTYPGHS---PSHTPPASQSQEPEYSHRRWQKRHF 253 Query: 324 C 326 C Sbjct: 254 C 254
>SRY_MUSSP (Q62563) Sex-determining region Y protein (Testis-determining| factor) Length = 355 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 3/82 (3%) Frame = +3 Query: 102 HDRVRGQLELPDREHH---IHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRG 272 HD + Q + D + H +Q HQ QQ Q HDH H Q++ Sbjct: 181 HDHQQQQQQFHDHQQQKQQFHDHQQQQQQFHDHHHQQQQQQFHDHHHHQQQQQQFH-DHH 239 Query: 273 QDKGQGVGHRRWARPRCCHACP 338 Q K Q H + + + H P Sbjct: 240 QQKQQFHDHHQQQQQQQFHDHP 261 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/60 (26%), Positives = 26/60 (43%) Frame = +3 Query: 102 HDRVRGQLELPDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRGQDK 281 HD Q + +HH H + +Q H Q+ Q HDH + Q++ P+ Q + Sbjct: 211 HDHHHQQQQQQFHDHHHHQQQQQQFHD----HHQQKQQFHDHHQQQQQQQFHDHPQQQQQ 266
>PAK4_HUMAN (O96013) Serine/threonine-protein kinase PAK 4 (EC 2.7.11.1)| (p21-activated kinase 4) (PAK-4) Length = 591 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Frame = +3 Query: 171 GVAAGARLHQGQQGQVH-----DHP-RHAQERPHVQAPRGQDKG 284 G+A+GA+L G+ + DHP R AQ PH AP G G Sbjct: 192 GLASGAKLAAGRPFNTYPRADTDHPSRGAQGEPHDVAPNGPSAG 235
>DSC1_BOVIN (Q01107) Desmocollin-1 precursor (Desmosomal glycoprotein 2/3)| (DG2/DG3) Length = 893 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/56 (33%), Positives = 26/56 (46%) Frame = +1 Query: 61 VTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVFIRGSRVRFMII 228 V E TGE R I+ EDNW +I T K KV E F++ ++ +I Sbjct: 495 VDPERGTGEGLRYKKIQDEDNW-FEINEYTGDLKTVKVLDRESTFVKNNQYNVSVI 549
>SAHH_XANCP (Q8PCH5) Adenosylhomocysteinase (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) Length = 480 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 Query: 115 EDNWNCQIENITFTAKDGKVSQLEHVFIRGSRVRFMI 225 E+ W+C ++ +TFT DG ++ E V G V +I Sbjct: 114 EEYWDCTLDALTFTLPDGTLTGPELVVDDGGDVTLLI 150
>SAHH_XANAC (Q8PP84) Adenosylhomocysteinase (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) Length = 480 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 Query: 115 EDNWNCQIENITFTAKDGKVSQLEHVFIRGSRVRFMI 225 E+ W+C ++ +TFT DG ++ E V G V +I Sbjct: 114 EEYWDCTLDALTFTLPDGTLTGPELVVDDGGDVTLLI 150
>RFC1_DROME (P35600) Activator 1 140 kDa subunit (Replication factor C large| subunit) (Germline transcription factor 1) Length = 986 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 8/70 (11%) Frame = +3 Query: 96 GLHDRVRGQLELPDREHHIHSKGRQGVAAGARLHQGQQ--------GQVHDHPRHAQERP 251 G+ +V+ + + P +EH KG++ V R ++ G+ HD +H + Sbjct: 314 GIAKQVKEEKKSPKKEHSSEEKGKKEVKTSRRSSDKKEKEATKLKYGEKHDIAKHKVKEE 373 Query: 252 HVQAPRGQDK 281 H +DK Sbjct: 374 HTSPKETKDK 383
>DSC1_MOUSE (P55849) Desmocollin-1 precursor| Length = 886 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = +1 Query: 61 VTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVFIRGSRVRFMII 228 V E +GE R M+ EDNW +I IT + KV E F++ ++ ++ Sbjct: 496 VDPETSSGEGLRYEMVGDEDNW-FEINKITGDLRTVKVLDRESKFVKNNQYNISVV 550
>SRY_MOUSE (Q05738) Sex-determining region Y protein (Testis-determining| factor) Length = 395 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Frame = +3 Query: 102 HDRVRGQLELPDREHHIHSK---GRQGVAAGARLHQGQQGQVHDHPRHAQE 245 HD + + + D HH + Q HQ QQ Q HDHP+ Q+ Sbjct: 240 HDHHQQKQQFHDHHHHQQQQQFHDHQQQQQQFHDHQQQQHQFHDHPQQKQQ 290 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = +3 Query: 102 HDRVRGQLELPDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQER 248 H + + Q + ++ H H + +Q H QQ Q HDH H QE+ Sbjct: 168 HHQQQQQQQQQQQQFHDHHQQKQQFHD----HHQQQQQFHDHHHHHQEQ 212
>OAS3_HUMAN (Q9Y6K5) 2'-5'-oligoadenylate synthetase 3 (EC 2.7.7.-)| ((2-5')oligo(A) synthetase 3) (2-5A synthetase 3) (p100 OAS) (p100OAS) Length = 1087 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +2 Query: 296 PSALGAAALLPCVPGLPVDVVAAPLLEED 382 P GAA+++P VPG+ +D+ P E D Sbjct: 389 PGPTGAASIVPSVPGMALDLSQIPTKELD 417
>RUXX_PYRFU (Q8U0P4) Putative snRNP Sm-like protein| Length = 76 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/63 (26%), Positives = 29/63 (46%) Frame = +1 Query: 25 PVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVFIRG 204 P+ ++H++ V V LK G +RG +I + + N + N V + + IRG Sbjct: 5 PLDVIHKSLDKDVLVILKKGFEFRGKLIGYDIHLNVVLANAELLQDGEVVKKYGKIVIRG 64 Query: 205 SRV 213 V Sbjct: 65 DNV 67
>RUXX_METAC (Q8TL47) Putative snRNP Sm-like protein| Length = 72 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/66 (27%), Positives = 30/66 (45%) Frame = +1 Query: 25 PVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVFIRG 204 P+ +L+ A V V LK +RG + + + N ++N VS+ V IRG Sbjct: 5 PLDILNNALDTPVIVRLKGAREFRGELKGYDIHMNLVLDNAEELRDGEVVSKFSSVVIRG 64 Query: 205 SRVRFM 222 V ++ Sbjct: 65 DNVVYV 70
>ARLY_PSESM (Q88B94) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 464 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = +1 Query: 19 GIPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFT--AKDGKVSQLEHV 192 G+P + HE GH V ++TG+ +E ++ QIE F +G V+ HV Sbjct: 383 GLPFRDCHEIVGHAVKYGVETGKDLAEMSLEELRQFSNQIEQDVFAVLTLEGSVNARNHV 442
>TSC10_NEUCR (Q7RZR2) 3-ketodihydrosphingosine reductase tsc-10 (EC 1.1.1.102)| (3-dehydrosphinganine reductase) (KDS reductase) Length = 969 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Frame = +3 Query: 99 LHDRVRGQLELPDR---EHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPR 269 +H +++ QL+L + EH +HS L Q Q Q DH +H QE+ H + Sbjct: 499 IHPQLQAQLQLQHQQAQEHDLHSH---------HLQQHQPDQTQDHLQHQQEQ-HQEPDI 548 Query: 270 GQD 278 QD Sbjct: 549 DQD 551
>MPP3_HUMAN (Q13368) MAGUK p55 subfamily member 3 (MPP3 protein) (Discs large| homolog 3) Length = 585 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +3 Query: 183 GARLHQGQQGQVHDHPRH-AQERPHVQAPRGQDKGQGV 293 GARLH+ +Q V ++P+H PH PR + +GV Sbjct: 395 GARLHELKQKVVAENPQHFGVAVPHTTRPRKSHEKEGV 432
>LSM6_SCHPO (Q9UUI1) U6 snRNA-associated Sm-like protein LSm6| Length = 75 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +1 Query: 25 PVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNW-NCQIENITFTAKDGKVSQLEHVFIR 201 P + L++ G V + L +G Y+G ++ C D + N +E K + FIR Sbjct: 5 PNEFLNKVIGKKVLIRLSSGVDYKG-ILSCLDGYMNLALERTEEYVNGKKTNVYGDAFIR 63 Query: 202 GSRVRFM 222 G+ V ++ Sbjct: 64 GNNVLYV 70
>SYS_AQUAE (O66647) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 425 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = +3 Query: 249 PHVQAPRGQDKGQGVGHRRWARPR 320 PH P G+D+ V RRW PR Sbjct: 109 PHPSVPVGEDEKDNVEVRRWGEPR 132
>DDFL1_HUMAN (Q8TDY4) Development and differentiation enhancing factor-like 1| (Protein up-regulated in liver cancer 1) Length = 903 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +3 Query: 90 LPGLHDRVRGQLELPDREHHIHSKGRQGVAAGARLHQGQQ 209 L L D +RG L+L RE H+ S+ G HQG + Sbjct: 261 LTQLRDSLRGTLQLESREEHL-SRKNSGCGYSIHQHQGNK 299
>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21| Length = 2189 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/52 (25%), Positives = 22/52 (42%) Frame = +3 Query: 117 GQLELPDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRG 272 GQ++ +H H+ Q + + Q H + Q+ HVQ P+G Sbjct: 1856 GQVQPQHAQHSRHTPNSQHAQHTQQAQHARNAQQAHHTQQVQQAQHVQQPQG 1907
>CJ012_HUMAN (Q8N655) Protein C10orf12| Length = 1247 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +3 Query: 132 PDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPR 233 P +E+H+HS GR V G LH +GQ DH + Sbjct: 80 PKQENHLHSLGRNKV--GYHLHPSDKGQ-FDHSK 110
>SYS_BURPS (Q63RS1) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 433 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 Query: 249 PHVQAPRGQDKGQGVGHRRWARPR 320 PH P G+D+ + V RRW PR Sbjct: 107 PHESVPVGRDETENVEVRRWGAPR 130
>SYS_BURMA (Q62HY1) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 433 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 Query: 249 PHVQAPRGQDKGQGVGHRRWARPR 320 PH P G+D+ + V RRW PR Sbjct: 107 PHESVPVGRDETENVEVRRWGAPR 130
>MRCKG_MOUSE (Q80UW5) Serine/threonine-protein kinase MRCK gamma (EC 2.7.11.1)| (CDC42-binding protein kinase gamma) (Myotonic dystrophy kinase-related CDC42-binding kinase gamma) (Myotonic dystrophy protein kinase-like alpha) (MRCK gamma) (DMPK-like gamma Length = 1551 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +1 Query: 67 VELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQ 180 +EL++ + G E E NW QI +I D KVS+ Sbjct: 657 LELQSKQRLEGERRETESNWEAQIADILSWVNDEKVSR 694
>VLDLR_CHICK (P98165) Very low-density lipoprotein receptor precursor (VLDL| receptor) (VLDL-R) (Vitellogenin receptor) (VTG receptor) Length = 863 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/23 (52%), Positives = 12/23 (52%) Frame = +3 Query: 267 RGQDKGQGVGHRRWARPRCCHAC 335 R G G G RRWA PRC C Sbjct: 10 RSAATGGGCGARRWALPRCGALC 32
>RUXX_PYRKO (Q5JIE0) Putative snRNP Sm-like protein| Length = 76 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/63 (25%), Positives = 29/63 (46%) Frame = +1 Query: 25 PVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVFIRG 204 P+ ++H++ V V LK G +RG +I + + N + + V + + IRG Sbjct: 5 PLDVIHKSLDKDVLVLLKRGNEFRGKLIGYDIHLNVVLADAELIQDGEVVKKYGKIVIRG 64 Query: 205 SRV 213 V Sbjct: 65 DNV 67
>LSM2_MOUSE (O35900) U6 snRNA-associated Sm-like protein LSm2 (SnRNP core| Sm-like protein Sm-x5) (Protein G7b) Length = 95 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Frame = +1 Query: 52 GHVVTVELKTGEVYRGSMIECEDNWNCQIENITFT--AKDGKVSQLEHVFIRGSRVRFMI 225 G V VELK G++ + N ++ +I+ T K + +++ FIRGS VR++ Sbjct: 12 GKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQ 71 Query: 226 IP 231 +P Sbjct: 72 LP 73
>LSM2_HUMAN (Q9Y333) U6 snRNA-associated Sm-like protein LSm2 (SnRNP core| Sm-like protein Sm-x5) (Small nuclear ribonuclear protein D homolog) (Protein G7b) Length = 95 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Frame = +1 Query: 52 GHVVTVELKTGEVYRGSMIECEDNWNCQIENITFT--AKDGKVSQLEHVFIRGSRVRFMI 225 G V VELK G++ + N ++ +I+ T K + +++ FIRGS VR++ Sbjct: 12 GKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQ 71 Query: 226 IP 231 +P Sbjct: 72 LP 73
>TOLB_IDILO (Q5QYU0) Protein tolB precursor| Length = 449 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 Query: 88 VYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVFIRGSRVR 216 V R I+ E NW E++ FT++ G QL V + +VR Sbjct: 302 VTRNRTIDTEPNWTPDGESLVFTSERGGRPQLYSVNLSSGQVR 344
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 28.1 bits (61), Expect = 5.3 Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 12/81 (14%) Frame = +3 Query: 96 GLHDRVRGQL----ELPDREHHIHSKGRQGVAAGARLHQGQQ----GQVHDHPRH--AQE 245 G HD GQ + HH +GR G +G GQ+ GQ + RH Sbjct: 855 GQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGSGQSPSYGRHGSGSG 914 Query: 246 RPHVQAPRGQDKGQ--GVGHR 302 R G GQ G GH+ Sbjct: 915 RSSSSGRHGSGSGQSSGFGHK 935
>SMD1_YEAST (Q02260) Small nuclear ribonucleoprotein Sm D1 (snRNP core protein| D1) (Sm-D1) Length = 146 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 27/98 (27%) Frame = +1 Query: 28 VKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFT----------------- 156 V L + VT+ELK G G++ N + ++ T Sbjct: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 Query: 157 ----------AKDGKVSQLEHVFIRGSRVRFMIIPDML 240 ++ L+++ IRG+ +R +I+PD L Sbjct: 64 SLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101
>DNAJ_HALMA (Q5UXH9) Chaperone protein dnaJ| Length = 384 Score = 27.7 bits (60), Expect = 7.0 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 6/81 (7%) Frame = +3 Query: 117 GQLELPDREHHIHSKGRQGVAAGARLHQGQQGQ------VHDHPRHAQERPHVQAPRGQD 278 G ++ D G +G G+R QGQ Q + + A ++ +V P D Sbjct: 100 GGFDMQDIFDQFFGGGGRGGRGGSRRRQGQDLQTRLEIDLEEAYNGATKQLNVTRPEACD 159 Query: 279 KGQGVGHRRWARPRCCHACPG 341 G GH A C C G Sbjct: 160 DCDGAGHPPGADSETCPECNG 180
>KNOB_PLAFA (P13817) Knob-associated histidine-rich protein precursor (KAHRP)| (HRPI) (Fragment) Length = 473 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Frame = +3 Query: 102 HDRVRGQLELPDREHHIHSKGR---QGVAAGARLHQGQQGQVHDHPRHAQERP 251 H + + Q + P + HH H G Q ++H Q H H H Q +P Sbjct: 68 HHQHQHQHQAPHQAHHHHHHGEVNHQAPQVHQQVHGQDQAHHHHHHHHHQLQP 120
>CARA_STAES (Q8CPJ5) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase glutamine chain) Length = 366 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 5/59 (8%) Frame = +1 Query: 28 VKLLHEAAGHVVTVELKTGEV-----YRGSMIECEDNWNCQIENITFTAKDGKVSQLEH 189 +K H A H V +L+TG++ G I+C+ N +E DG V L H Sbjct: 265 MKFGHRGANHPVK-DLRTGKIDITSQNHGYSIDCDSLKNTDLEVTHIALNDGTVEGLRH 322
>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1)| (Protein kinase with no lysine 2) (Protein kinase, lysine-deficient 2) Length = 2297 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +2 Query: 284 ARGRPSALGAAALL--PCVPGLPVDVVAAPL 370 ARGRP+A AAL+ P PG P D P+ Sbjct: 89 ARGRPAAPAPAALVAQPGAPGAPADAGPEPV 119
>OVO_DROME (P51521) Protein ovo (Protein shaven baby)| Length = 1351 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = +3 Query: 138 REHHIHSKGRQGVAAGARLHQGQQGQVHDHPRH-AQERPHVQAPRGQDKGQGVGHRRWAR 314 ++H+I+++ +Q + HQ QQ Q H H H Q++P Q+ G G + + Sbjct: 939 QQHNIYAQQQQ--QQQQQHHQQQQQQQHHHFHHQQQQQPQPQSHHSHHHGHGHDNSNMSL 996 Query: 315 P 317 P Sbjct: 997 P 997
>KNOB_PLAFG (P09346) Knob-associated histidine-rich protein precursor (KAHRP)| (KP) Length = 634 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Frame = +3 Query: 102 HDRVRGQLELPDREHHIHSKGR---QGVAAGARLHQGQQGQVHDHPRHAQERP 251 H + + Q + P + HH H G Q ++H Q H H H Q +P Sbjct: 68 HHQHQHQHQAPHQAHHHHHHGEVNHQAPQVHQQVHGQDQAHHHHHHHHHQLQP 120
>CAND_DROME (P27398) Calpain D (EC 3.4.22.-) (Calcium-activated neutral| proteinase D) (CANP D) (Small optic lobes protein) Length = 1594 Score = 27.7 bits (60), Expect = 7.0 Identities = 27/86 (31%), Positives = 31/86 (36%), Gaps = 12/86 (13%) Frame = +3 Query: 114 RGQLELPDREH--HIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRGQDKGQ 287 RG+L D H H H Q + HQ Q H H RH + R + G G Sbjct: 187 RGELLAADHSHPHHHHHYLHQELE---EQHQHQLHSQHLHKRHLKGRS--ASGSGSGPGS 241 Query: 288 GVGHRRW----------ARPRCCHAC 335 G G RR A R CH C Sbjct: 242 GSGLRRTQSLSTAIDKSASGRSCHIC 267
>AAC4_DICDI (P14198) AAC-rich mRNA clone pLK330 protein (Fragment)| Length = 317 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/34 (29%), Positives = 20/34 (58%) Frame = +1 Query: 133 QIENITFTAKDGKVSQLEHVFIRGSRVRFMIIPD 234 Q++N F D K ++ EH F G +++ ++P+ Sbjct: 91 QVQNNCFETCDFKATEREHYFASGKQIQESVLPE 124
>EAF3_ASPFU (Q4WPW2) Chromatin modification-related protein eaf3| Length = 330 Score = 27.7 bits (60), Expect = 7.0 Identities = 20/61 (32%), Positives = 34/61 (55%) Frame = +1 Query: 64 TVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQLEHVFIRGSRVRFMIIPDMLK 243 T++ K G RGS + E+ +T A+D ++ + EH + R S VR +++PD LK Sbjct: 95 TLKRKAGSD-RGSARDSEERQTSVPGRVTKRARDNEIEKEEHFYTRPS-VR-IVMPDNLK 151 Query: 244 N 246 + Sbjct: 152 S 152
>TIG_IDILO (Q5QXN7) Trigger factor (TF)| Length = 433 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = +1 Query: 22 IPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTA 159 +P +L E A V V L GEV RG+ ++ +D +++ I TA Sbjct: 332 LPAELFEEQAKERVKVGLLLGEVIRGNELKADDE---KVDEIIATA 374
>SAHH_XYLFA (Q9PEJ1) Adenosylhomocysteinase (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) Length = 480 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/37 (29%), Positives = 20/37 (54%) Frame = +1 Query: 115 EDNWNCQIENITFTAKDGKVSQLEHVFIRGSRVRFMI 225 E+ W+C ++ +TFT DG ++ E + G +I Sbjct: 114 EEYWDCTLQALTFTLSDGTLTGPELIVDDGGDATLLI 150
>ZN384_HUMAN (Q8TF68) Zinc finger protein 384 (Nuclear matrix transcription| factor 4) (Nuclear matrix protein 4) (CAG repeat protein 1) (CAS-interacting zinc finger protein) Length = 576 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/53 (30%), Positives = 21/53 (39%) Frame = +3 Query: 168 QGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRGQDKGQGVGHRRWARPRCC 326 Q A ++ Q QQ Q + Q PH Q+P +G G G P C Sbjct: 491 QAQAQASQASQQQQQQQQQQQQQQQPPPHFQSPGAAPQGGGGGDSNPNPPPQC 543
>GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW212 precursor| Length = 838 Score = 27.3 bits (59), Expect = 9.1 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 11/69 (15%) Frame = +3 Query: 117 GQLELP--DREHHIHSKGRQG-----VAAGARLHQGQQGQVHDHPRHAQERPHVQAP--- 266 GQL+ P ++ ++G+QG V G + QGQQGQ + Q+ Q P Sbjct: 558 GQLQQPAQGQQGQQLAQGQQGQQPAQVQQGQQPAQGQQGQQLGQGQQGQQPGQGQQPAQG 617 Query: 267 -RGQDKGQG 290 +GQ GQG Sbjct: 618 QQGQQPGQG 626
>FOXB2_MOUSE (Q64733) Forkhead box protein B2 (Transcription factor FKH-4)| Length = 428 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/39 (33%), Positives = 14/39 (35%), Gaps = 3/39 (7%) Frame = +3 Query: 147 HIHS---KGRQGVAAGARLHQGQQGQVHDHPRHAQERPH 254 H+HS KG G G LH H H H H Sbjct: 118 HLHSGSSKGAPGTGPGGHLHPHHPHHAHHHHHHHHHAAH 156
>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)| Length = 644 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +3 Query: 186 ARLHQGQQGQVHDHPRHAQERPH 254 A+ HQ QQ Q H +HAQ++ H Sbjct: 13 AQQHQAQQQQHAQHQQHAQQQQH 35
>SYS_GEOKA (Q5L3Y0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 424 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = +3 Query: 249 PHVQAPRGQDKGQGVGHRRWARPR 320 PH P GQ + V RRW PR Sbjct: 108 PHESVPIGQSEEDNVEVRRWGEPR 131
>SYS_DESVH (Q72FH6) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 424 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/30 (36%), Positives = 13/30 (43%) Frame = +3 Query: 249 PHVQAPRGQDKGQGVGHRRWARPRCCHACP 338 PH P G+D+ V RW PR P Sbjct: 107 PHESVPEGRDENDNVEVLRWGTPRAFSFTP 136
>MCM1_YEAST (P11746) Pheromone receptor transcription factor (GRM/PRTF protein)| Length = 286 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/53 (28%), Positives = 22/53 (41%) Frame = +3 Query: 129 LPDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRGQDKGQ 287 + ++HH + Q Q Q Q+ HPR Q PH Q + Q + Q Sbjct: 178 IQQQQHHTQNSQPQQQQQQQPQQQMSQQQMSQHPRPQQGIPHPQQSQPQQQQQ 230
>RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast precursor| Length = 1783 Score = 27.3 bits (59), Expect = 9.1 Identities = 17/61 (27%), Positives = 25/61 (40%) Frame = +3 Query: 135 DREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRGQDKGQGVGHRRWAR 314 D + H+ AA A +Q Q H +H QE+ +A + G G +RW Sbjct: 1396 DAKRHVRQSAAAAAAAAAAAQDQRQEQ---HQQHQQEQLLAKALVEYLQALGAGVQRWPP 1452 Query: 315 P 317 P Sbjct: 1453 P 1453
>CRU1_BRANA (P33523) Cruciferin BnC1 precursor (11S globulin) (12S storage| protein) [Contains: Cruciferin BnC1 alpha subunit; Cruciferin BnC1 beta subunit] Length = 490 Score = 27.3 bits (59), Expect = 9.1 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = +3 Query: 171 GVAAGARLHQGQQGQVHDHPRHAQERPHVQAPRGQDKGQGVGHR 302 G +G QGQQGQ H Q + Q +GQ + QG G R Sbjct: 121 GSPSGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQ-QSQGQGFR 163
>ARLY_PSEPK (P59618) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 464 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = +1 Query: 19 GIPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFT--AKDGKVSQLEHV 192 G+P + HE GH V + TG+ ++ ++ QIE F +G V+ +H+ Sbjct: 383 GLPFRDCHEIVGHAVKYGVDTGKDLAEMSLDELRQFSDQIEQDVFAVLTLEGSVNARDHI 442
>SRY_MUSSI (Q62565) Sex-determining region Y protein (Testis-determining| factor) Length = 311 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/49 (30%), Positives = 21/49 (42%) Frame = +3 Query: 102 HDRVRGQLELPDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQER 248 HD + Q + +HH + HQ QQ Q HDH H Q++ Sbjct: 162 HDHHQQQQQQQFHDHHQQKQQFHD-------HQQQQQQFHDHHHHQQQQ 203
>MSBB_HAEIN (P44567) Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA| acyltransferase (EC 2.3.1.-) Length = 318 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -2 Query: 105 HGAPVDLAGLELHRHHMPRRLVQQLHRDP 19 HG +D +G+ LH MP + HR+P Sbjct: 145 HGWAIDASGIILHTQGMPMTSMYNPHRNP 173
>GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 precursor| Length = 839 Score = 27.3 bits (59), Expect = 9.1 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = +3 Query: 117 GQLELPDREHHIHSKGRQGVAAGARLHQGQQGQVHDHPRHAQE-RPHVQAPRGQDKGQG 290 GQL+ P ++G+QG +L QGQQGQ P Q+ + Q +GQ GQG Sbjct: 553 GQLQQP-------AQGQQG----QQLAQGQQGQ---QPAQVQQGQQPAQGQQGQQLGQG 597
>CAAL_HALSA (Q9HPZ9) Carboxylate-amine ligase Vng1397c (EC 6.3.-.-)| Length = 360 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +3 Query: 180 AGARLHQGQQGQVHDH---PRHAQERPHVQAPRGQDKGQGV 293 AGA LH G + + H+H PR+ + +Q P+ ++ G+ Sbjct: 96 AGAGLHPGARWREHEHAEKPRYRSQLDRIQYPQHRNTTAGL 136
>SAHH_XYLFT (Q87EI8) Adenosylhomocysteinase (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) Length = 480 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/37 (29%), Positives = 20/37 (54%) Frame = +1 Query: 115 EDNWNCQIENITFTAKDGKVSQLEHVFIRGSRVRFMI 225 E+ W+C ++ +TFT DG ++ E + G +I Sbjct: 114 EEYWDCTLQALTFTLADGTLTGPELIVDDGGDATLLI 150 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,720,687 Number of Sequences: 219361 Number of extensions: 752613 Number of successful extensions: 3021 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 2789 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2974 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
