ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast59d12 |
|---|---|
| Clone Library Name | barley_pub |
>HAT7_ARATH (Q00466) Homeobox-leucine zipper protein HAT7 (HD-ZIP protein 7)| (HD-ZIP protein ATHB-3) Length = 314 Score = 171 bits (432), Expect = 1e-42 Identities = 87/137 (63%), Positives = 108/137 (78%), Gaps = 2/137 (1%) Frame = +3 Query: 6 SDDGSQLG-GEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNR 182 SDDGS + GEKK+RLN+EQVR LEK+FE+ NKLEPERKMQLA+ALGLQPRQ+AIWFQNR Sbjct: 104 SDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNR 163 Query: 183 RARWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLKGCREAASELINLNKE 362 RARWKTKQLE+DYD LK+QFD +K++ND+LL+HNKKL +E++ LK + E + +E Sbjct: 164 RARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALK--KHDRKESAKIKRE 221 Query: 363 -TEASCSNRSENSSEIN 410 EAS SN + N Sbjct: 222 FAEASWSNNGSTENNHN 238
>ATHB5_ARATH (P46667) Homeobox-leucine zipper protein ATHB-5 (HD-ZIP protein| ATHB-5) Length = 312 Score = 141 bits (355), Expect = 8e-34 Identities = 84/158 (53%), Positives = 101/158 (63%), Gaps = 12/158 (7%) Frame = +3 Query: 9 DDGS--QLGG---------EKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPR 155 DDGS LGG EKKRRL VEQV+ LEKNFE+ NKLEPERK++LA+ LGLQPR Sbjct: 52 DDGSLEDLGGVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPR 111 Query: 156 QVAIWFQNRRARWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLKG-CREA 332 QVAIWFQNRRARWKTKQLE+DY VLK FDA+K D+L N L +I LK Sbjct: 112 QVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVE 171 Query: 333 ASELINLNKETEASCSNRSENSSEINLDISRTPPSDGP 446 + I N +A +N+S ++ L++S PS P Sbjct: 172 GVKGIEENGALKAVEANQSVMANNEVLELSHRSPSPPP 209
>ATHB6_ARATH (P46668) Homeobox-leucine zipper protein ATHB-6 (Homeodomain| transcription factor ATHB-6) (HD-ZIP protein ATHB-6) Length = 311 Score = 135 bits (340), Expect = 5e-32 Identities = 73/128 (57%), Positives = 89/128 (69%), Gaps = 5/128 (3%) Frame = +3 Query: 33 EKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLE 212 EKKRRL++ QV+ LEKNFE+ NKLEPERK++LA+ LGLQPRQVA+WFQNRRARWKTKQLE Sbjct: 61 EKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLE 120 Query: 213 KDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLK-----GCREAASELINLNKETEASC 377 KDY VLK Q+D+++ D+L N+ L EI LK G E E N TE+ Sbjct: 121 KDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDI 180 Query: 378 SNRSENSS 401 S + E S Sbjct: 181 SVKEEEVS 188
>HAT5_ARATH (Q02283) Homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5)| (HD-ZIP protein ATHB-1) Length = 272 Score = 133 bits (334), Expect = 2e-31 Identities = 66/107 (61%), Positives = 82/107 (76%), Gaps = 4/107 (3%) Frame = +3 Query: 33 EKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLE 212 EKKRRL EQV LEK+FE NKLEPERK QLA+ LGLQPRQVA+WFQNRRARWKTKQLE Sbjct: 67 EKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 126 Query: 213 KDYDVLKRQFDAVKAENDALLSHNKKLQSEILG----LKGCREAASE 341 +DYD+LK +D + + D+++ N KL+SE+ L+G +E A+E Sbjct: 127 RDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETANE 173
>ATHB7_ARATH (P46897) Homeobox-leucine zipper protein ATHB-7 (Homeodomain| transcription factor ATHB-7) (HD-ZIP protein ATHB-7) Length = 258 Score = 105 bits (263), Expect = 4e-23 Identities = 52/114 (45%), Positives = 78/114 (68%) Frame = +3 Query: 39 KRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 +RR + EQ+++LE FE +LEP +K+QLAR LGLQPRQVAIWFQN+RARWK+KQLE + Sbjct: 33 QRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETE 92 Query: 219 YDVLKRQFDAVKAENDALLSHNKKLQSEILGLKGCREAASELINLNKETEASCS 380 Y++L++ +D + ++ ++L + L SE+ LK + ++ E E CS Sbjct: 93 YNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQ------EEERQCS 140
>HAT22_ARATH (P46604) Homeobox-leucine zipper protein HAT22 (HD-ZIP protein 22)| Length = 278 Score = 82.4 bits (202), Expect = 5e-16 Identities = 47/123 (38%), Positives = 67/123 (54%) Frame = +3 Query: 9 DDGSQLGGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRA 188 DD + KK RL +Q LE NF++ + L P++K LAR L L+PRQV +WFQNRRA Sbjct: 117 DDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRA 176 Query: 189 RWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLKGCREAASELINLNKETE 368 R K KQ E D + LK+ + L N++LQ E+ LK + + +++ T Sbjct: 177 RTKLKQTEVDCEFLKKCC-------ETLTDENRRLQKELQDLKALKLSQPFYMHMPAATL 229 Query: 369 ASC 377 C Sbjct: 230 TMC 232
>HAT1_ARATH (P46600) Homeobox-leucine zipper protein HAT1 (HD-ZIP protein 1)| Length = 282 Score = 81.3 bits (199), Expect = 1e-15 Identities = 49/108 (45%), Positives = 64/108 (59%), Gaps = 3/108 (2%) Frame = +3 Query: 3 TSDDGSQLGGE---KKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWF 173 TSD+ GGE KK RL+ +Q LE F+ N L P++K+ LA+ LGL RQV +WF Sbjct: 121 TSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWF 180 Query: 174 QNRRARWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLK 317 QNRRAR K KQ E D + LKR + + EN L +K +E+ LK Sbjct: 181 QNRRARTKLKQTEVDCEYLKRCVEKLTEENRRL----EKEAAELRALK 224
>ATHB4_ARATH (P92953) Homeobox-leucine zipper protein ATHB-4 (HD-ZIP protein| ATHB-4) Length = 318 Score = 80.1 bits (196), Expect = 2e-15 Identities = 50/144 (34%), Positives = 77/144 (53%), Gaps = 4/144 (2%) Frame = +3 Query: 9 DDGSQLGGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRA 188 D G+ G KK RL+ +Q LE+ F+ + L P++K+ LA+ L L+ RQV +WFQNRRA Sbjct: 154 DGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRA 213 Query: 189 RWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLKGCREAASELINLNKETE 368 R K KQ E D + LKR D + E N++LQ E+ L+ + + +++ T Sbjct: 214 RTKLKQTEVDCEYLKRCCDNLTEE-------NRRLQKEVSELRALKLSPHLYMHMTPPTT 266 Query: 369 ----ASCSNRSENSSEINLDISRT 428 SC S +++ + S T Sbjct: 267 LTMCPSCERVSSSAATVTAAPSTT 290
>HAT3_ARATH (P46602) Homeobox-leucine zipper protein HAT3 (HD-ZIP protein 3)| Length = 315 Score = 79.7 bits (195), Expect = 3e-15 Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 3/145 (2%) Frame = +3 Query: 9 DDGSQLGGE---KKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQN 179 +DGS G + KK RL+ EQ LE+ F+ + L P++KM LA+ L L+ RQV +WFQN Sbjct: 150 EDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQN 209 Query: 180 RRARWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLKGCREAASELINLNK 359 RRAR K KQ E D + LKR EN L N++LQ E+ L+ + + +++ Sbjct: 210 RRARTKLKQTEVDCEYLKR-----CCEN--LTDENRRLQKEVSELRALKLSPHLYMHMKP 262 Query: 360 ETEASCSNRSENSSEINLDISRTPP 434 T + E + + S PP Sbjct: 263 PTTLTMCPSCERVAVTSSSSSVAPP 287
>HAT4_ARATH (Q05466) Homeobox-leucine zipper protein HAT4 (HD-ZIP protein 4)| (HD-ZIP protein ATHB-2) Length = 284 Score = 76.6 bits (187), Expect = 3e-14 Identities = 48/132 (36%), Positives = 72/132 (54%) Frame = +3 Query: 6 SDDGSQLGGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRR 185 SDD KK RL+ +Q LE+ F+ + L P++K LA+ LGL+ RQV +WFQNRR Sbjct: 119 SDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRR 178 Query: 186 ARWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLKGCREAASELINLNKET 365 AR K KQ E D + L+R EN L N++LQ E+ L+ + + ++++ T Sbjct: 179 ARTKLKQTEVDCEFLRR-----CCEN--LTEENRRLQKEVTELRALKLSPQFYMHMSPPT 231 Query: 366 EASCSNRSENSS 401 + E+ S Sbjct: 232 TLTMCPSCEHVS 243
>HAT14_ARATH (P46665) Homeobox-leucine zipper protein HAT14 (HD-ZIP protein 14)| Length = 336 Score = 76.6 bits (187), Expect = 3e-14 Identities = 44/114 (38%), Positives = 66/114 (57%) Frame = +3 Query: 36 KKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 215 KK RL+ +Q LE +F+ + L P++K+ LA+ L L+PRQV +WFQNRRAR K KQ E Sbjct: 190 KKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEV 249 Query: 216 DYDVLKRQFDAVKAENDALLSHNKKLQSEILGLKGCREAASELINLNKETEASC 377 D + LKR +++ E N++LQ E+ L+ + + + L T C Sbjct: 250 DCEYLKRCCESLTEE-------NRRLQKEVKELRTLKTSTPFYMQLPATTLTMC 296
>HAT9_ARATH (P46603) Homeobox-leucine zipper protein HAT9 (Homeodomain-leucine| zipper protein HAT9) (Homeodomain transcription factor HAT9) (HD-ZIP protein 9) Length = 274 Score = 76.3 bits (186), Expect = 3e-14 Identities = 46/123 (37%), Positives = 65/123 (52%) Frame = +3 Query: 9 DDGSQLGGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRA 188 +D + KK RL +Q LE++F+ + L P++K LAR L L+PRQV +WFQNRRA Sbjct: 104 EDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRA 163 Query: 189 RWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLKGCREAASELINLNKETE 368 R K KQ E D + LK+ + L N +LQ EI LK + +++ T Sbjct: 164 RTKLKQTEVDCEFLKKCC-------ETLADENIRLQKEIQELKTLKLTQPFYMHMPASTL 216 Query: 369 ASC 377 C Sbjct: 217 TKC 219
>HAT2_ARATH (P46601) Homeobox-leucine zipper protein HAT2 (HD-ZIP protein 2)| Length = 283 Score = 75.5 bits (184), Expect = 6e-14 Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 3/107 (2%) Frame = +3 Query: 6 SDDGSQLGGE---KKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 + D + GGE KK RL+ +Q LE+ F+ N L P++K+ LA+ L L RQV +WFQ Sbjct: 117 TSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQ 176 Query: 177 NRRARWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLK 317 NRRAR K KQ E D + LKR + + E N++LQ E + L+ Sbjct: 177 NRRARTKLKQTEVDCEYLKRCVEKLTEE-------NRRLQKEAMELR 216
>HGL2_ARATH (P46607) Homeobox protein GLABRA2 (Homeobox-leucine zipper protein| ATHB-10) (HD-ZIP protein ATHB-10) Length = 745 Score = 58.9 bits (141), Expect = 5e-09 Identities = 30/89 (33%), Positives = 49/89 (55%) Frame = +3 Query: 33 EKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLE 212 +K R +Q+R +E F+ + +++ QL++ LGL PRQV WFQNRR + K Q Sbjct: 101 KKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQER 160 Query: 213 KDYDVLKRQFDAVKAENDALLSHNKKLQS 299 + +LK + + ++ EN A+ K S Sbjct: 161 HENSLLKAELEKLREENKAMRESFSKANS 189
>HHEX_HUMAN (Q03014) Homeobox protein PRH (Hematopoietically expressed| homeobox) (Homeobox protein HEX) Length = 270 Score = 55.1 bits (131), Expect = 8e-08 Identities = 27/74 (36%), Positives = 40/74 (54%) Frame = +3 Query: 45 RLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 224 R + +Q LEK FE L P + +LA+ L L RQV WFQNRRA+W+ + E Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 202 Query: 225 VLKRQFDAVKAEND 266 K + +++ + D Sbjct: 203 NKKEELESLDSSCD 216
>HHEX_CHICK (Q05502) Homeobox protein PRH (Hematopoietically expressed| homeobox) Length = 277 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/74 (37%), Positives = 37/74 (50%) Frame = +3 Query: 45 RLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 224 R + EQ LEK FE L P + +LA+ L L RQV WFQNRRA+W+ + E Sbjct: 150 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQENPQA 209 Query: 225 VLKRQFDAVKAEND 266 K + + D Sbjct: 210 TKKEEAEGTGDHGD 223
>HXB4_MOUSE (P10284) Homeobox protein Hox-B4 (Hox-2.6)| Length = 250 Score = 53.9 bits (128), Expect = 2e-07 Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 3/60 (5%) Frame = +3 Query: 27 GGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 GGE KR +QV LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 158 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 217
>HXB4_HUMAN (P17483) Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6)| Length = 251 Score = 53.9 bits (128), Expect = 2e-07 Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 3/60 (5%) Frame = +3 Query: 27 GGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 GGE KR +QV LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 159 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>HHEX_MOUSE (P43120) Homeobox protein PRH (Hematopoietically expressed| homeobox) (Homeobox protein HEX) Length = 271 Score = 53.5 bits (127), Expect = 2e-07 Identities = 27/69 (39%), Positives = 37/69 (53%) Frame = +3 Query: 45 RLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 224 R + +Q LEK FE L P + +LA+ L L RQV WFQNRRA+W+ + E Sbjct: 144 RFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203 Query: 225 VLKRQFDAV 251 K D++ Sbjct: 204 NKKDALDSL 212
>HXA4_MOUSE (P06798) Homeobox protein Hox-A4 (Hox-1.4) (MH-3)| Length = 285 Score = 53.1 bits (126), Expect = 3e-07 Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Frame = +3 Query: 12 DGSQLGGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNR 182 + S GGE KR +QV LEK F L R++++A L L RQV IWFQNR Sbjct: 172 NSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNR 231 Query: 183 RARWK 197 R +WK Sbjct: 232 RMKWK 236
>HXA4_HETFR (Q9IA22) Homeobox protein Hox-A4| Length = 247 Score = 53.1 bits (126), Expect = 3e-07 Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 3/68 (4%) Frame = +3 Query: 3 TSDDGSQLGGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWF 173 T+ + + GGE KR +QV LEK F L R++++A L L RQV IWF Sbjct: 138 TTVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWF 197 Query: 174 QNRRARWK 197 QNRR +WK Sbjct: 198 QNRRMKWK 205
>HXC4_MOUSE (Q08624) Homeobox protein Hox-C4 (Hox-3.5)| Length = 264 Score = 52.8 bits (125), Expect = 4e-07 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 3/60 (5%) Frame = +3 Query: 27 GGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 GGE KR +QV LEK F L R++++A +L L RQ+ IWFQNRR +WK Sbjct: 153 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212
>HXB8A_BRARE (Q8AWZ0) Homeobox protein Hox-B8a (Hox-B8)| Length = 245 Score = 52.8 bits (125), Expect = 4e-07 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 2/82 (2%) Frame = +3 Query: 21 QLGGEKKRRLNVEQVRTLE--KNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARW 194 Q G ++ R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +W Sbjct: 141 QAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKW 200 Query: 195 KTKQLEKDYDVLKRQFDAVKAE 260 K + + + K + + ++ E Sbjct: 201 KKENNKDKFPSSKSEQEQIEKE 222
>HXB4_CHICK (P14840) Homeobox protein Hox-B4 (Chox-Z)| Length = 245 Score = 52.8 bits (125), Expect = 4e-07 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 3/60 (5%) Frame = +3 Query: 27 GGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 GGE KR +QV LEK F L R++++A +L L RQ+ IWFQNRR +WK Sbjct: 147 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWK 206
>HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4)| Length = 309 Score = 52.8 bits (125), Expect = 4e-07 Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Frame = +3 Query: 27 GGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 GGE KR +QV LEK F L R++++A L L RQV IWFQNRR +WK Sbjct: 206 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 265
>HXA4_HUMAN (Q00056) Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4)| Length = 320 Score = 52.8 bits (125), Expect = 4e-07 Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Frame = +3 Query: 27 GGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 GGE KR +QV LEK F L R++++A L L RQV IWFQNRR +WK Sbjct: 212 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 271
>HXA4_LINSA (P81192) Homeobox protein Hox-A4 (LsHox 4) (Fragment)| Length = 80 Score = 52.4 bits (124), Expect = 5e-07 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Frame = +3 Query: 12 DGSQLGGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNR 182 +G+ G E KR Q+ LEK F L R++++A AL L RQ+ IWFQNR Sbjct: 3 NGNFNGSESKRSRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHALDLSERQIKIWFQNR 62 Query: 183 RARWK 197 R +WK Sbjct: 63 RMKWK 67
>HXD4_MOUSE (P10628) Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1)| Length = 250 Score = 52.4 bits (124), Expect = 5e-07 Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Frame = +3 Query: 27 GGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 GGE KR +QV LEK F L R++++A L L RQ+ IWFQNRR +WK Sbjct: 149 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 208
>HXD4_HUMAN (P09016) Homeobox protein Hox-D4 (Hox-4B) (Hox-5.1) (HHO.C13)| Length = 255 Score = 52.4 bits (124), Expect = 5e-07 Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Frame = +3 Query: 27 GGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 GGE KR +QV LEK F L R++++A L L RQ+ IWFQNRR +WK Sbjct: 151 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 210
>HXB4_FUGRU (O13074) Homeobox protein Hox-B4 (HOXB-4)| Length = 251 Score = 52.4 bits (124), Expect = 5e-07 Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Frame = +3 Query: 27 GGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 GGE KR +QV LEK F L R++++A L L RQ+ IWFQNRR +WK Sbjct: 160 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWK 219
>HXB4A_BRARE (P22574) Homeobox protein Hox-B4a (Hox-B4) (Zf-13)| Length = 246 Score = 52.4 bits (124), Expect = 5e-07 Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Frame = +3 Query: 27 GGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 GGE KR +QV LEK F L R++++A L L RQ+ IWFQNRR +WK Sbjct: 148 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWK 207
>HXD4_CHICK (P17278) Homeobox protein Hox-D4 (Chox-A)| Length = 235 Score = 52.4 bits (124), Expect = 5e-07 Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Frame = +3 Query: 27 GGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 GGE KR +QV LEK F L R++++A L L RQ+ IWFQNRR +WK Sbjct: 141 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 200
>HM7X_CHICK (P15142) Homeobox protein CHOX-7 (Fragment)| Length = 124 Score = 52.4 bits (124), Expect = 5e-07 Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 2/63 (3%) Frame = +3 Query: 15 GSQLGGEKKRR--LNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRA 188 GS G ++RR EQ+ LEK F L + Q+A AL L QV IWFQNRRA Sbjct: 18 GSGAGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRA 77 Query: 189 RWK 197 +WK Sbjct: 78 KWK 80
>HXC4_HUMAN (P09017) Homeobox protein Hox-C4 (Hox-3E) (CP19)| Length = 264 Score = 52.0 bits (123), Expect = 7e-07 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 3/60 (5%) Frame = +3 Query: 27 GGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 GGE KR +QV LEK F L R++++A +L L RQ+ IWFQNRR +WK Sbjct: 153 GGEPKRSRAAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212
>GBX1_MOUSE (P82976) Homeobox protein GBX-1 (Gastrulation and brain-specific| homeobox protein 1) Length = 418 Score = 52.0 bits (123), Expect = 7e-07 Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Frame = +3 Query: 27 GGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 GG+ +RR EQ+ LEK F L + Q+A AL L QV IWFQNRRA+WK Sbjct: 313 GGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 372
>HXA11_MOUSE (P31311) Homeobox protein Hox-A11 (Hox-1.9)| Length = 313 Score = 52.0 bits (123), Expect = 7e-07 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%) Frame = +3 Query: 3 TSDDGSQLGGEKKRRLNVE----QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIW 170 T D GG++ R+ Q+R LE+ F + + E+++QL+R L L RQV IW Sbjct: 229 TEDKAGGSGGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIW 288 Query: 171 FQNRRARWKTKQLEKD 218 FQNR R K K++ +D Sbjct: 289 FQNR--RMKEKKINRD 302
>GBX1_HUMAN (Q14549) Homeobox protein GBX-1 (Gastrulation and brain-specific| homeobox protein 1) (Fragment) Length = 139 Score = 52.0 bits (123), Expect = 7e-07 Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Frame = +3 Query: 27 GGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 GG+ +RR EQ+ LEK F L + Q+A AL L QV IWFQNRRA+WK Sbjct: 34 GGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 93
>DFD_DROME (P07548) Homeotic protein deformed| Length = 586 Score = 51.6 bits (122), Expect = 9e-07 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 4/80 (5%) Frame = +3 Query: 21 QLGGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRAR 191 Q G E KR+ Q+ LEK F L R++++A L L RQ+ IWFQNRR + Sbjct: 361 QPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMK 420 Query: 192 W-KTKQLEKDYDVLKRQFDA 248 W K +L +V K+ DA Sbjct: 421 WKKDNKLPNTKNVRKKTVDA 440
>HMB3_TRIGR (P10178) Homeobox protein HB3 (Fragment)| Length = 108 Score = 51.2 bits (121), Expect = 1e-06 Identities = 21/47 (44%), Positives = 31/47 (65%) Frame = +3 Query: 57 EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 +Q LEK F + + R+ ++A++LGL RQ+ IWFQNRR +WK Sbjct: 37 QQTLELEKEFHFSRYVTRRRRFEIAQSLGLSERQIKIWFQNRRMKWK 83
>NX22A_BRARE (Q90481) Homeobox protein Nkx-2.2a (Homeobox protein NK-2 homolog| B) Length = 269 Score = 51.2 bits (121), Expect = 1e-06 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 2/77 (2%) Frame = +3 Query: 3 TSDDGSQLGGEKKRRLNVEQVRT--LEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 TS +GS G ++KRR+ + +T LE+ F L + LA + L P QV IWFQ Sbjct: 115 TSSNGSDSGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQ 174 Query: 177 NRRARWKTKQLEKDYDV 227 N R + K + EK +V Sbjct: 175 NHRYKMKRARAEKGMEV 191
>HXB8_MOUSE (P09632) Homeobox protein Hox-B8 (Hox-2.4)| Length = 243 Score = 51.2 bits (121), Expect = 1e-06 Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 2/83 (2%) Frame = +3 Query: 30 GEKKRRLNVEQVRTLE--KNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 203 G ++ R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK K Sbjct: 145 GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-K 203 Query: 204 QLEKDYDVLKRQFDAVKAENDAL 272 + KD +F + K E + L Sbjct: 204 ENNKD------KFPSSKCEQEEL 220
>HXB8_HUMAN (P17481) Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4)| Length = 243 Score = 51.2 bits (121), Expect = 1e-06 Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 2/83 (2%) Frame = +3 Query: 30 GEKKRRLNVEQVRTLE--KNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 203 G ++ R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK K Sbjct: 145 GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-K 203 Query: 204 QLEKDYDVLKRQFDAVKAENDAL 272 + KD +F + K E + L Sbjct: 204 ENNKD------KFPSSKCEQEEL 220
>HXB8_RAT (P18863) Homeobox protein Hox-B8 (R1A) (Fragment)| Length = 92 Score = 50.8 bits (120), Expect = 1e-06 Identities = 30/71 (42%), Positives = 41/71 (57%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQ 239 Q LEK F L +R+++++ ALGL RQV IWFQNRR +WK K+ KD + Sbjct: 22 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD------K 74 Query: 240 FDAVKAENDAL 272 F + K E + L Sbjct: 75 FPSSKCEQEEL 85
>HXC4A_BRARE (Q9PWM3) Homeobox protein Hox-C4a (Hox-C4)| Length = 268 Score = 50.8 bits (120), Expect = 1e-06 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Frame = +3 Query: 12 DGSQLGGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNR 182 + S G E KR +QV LEK F L R++++A +L L RQ+ IWFQNR Sbjct: 146 NSSYNGAEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNR 205 Query: 183 RARWK 197 R +WK Sbjct: 206 RMKWK 210
>NKX61_HUMAN (P78426) Homeobox protein Nkx-6.1| Length = 367 Score = 50.8 bits (120), Expect = 1e-06 Identities = 32/101 (31%), Positives = 45/101 (44%) Frame = +3 Query: 57 EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKR 236 +Q+ LEK FE L + +LA +LG+ QV +WFQNRR +W+ K + Sbjct: 246 QQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAE------- 298 Query: 237 QFDAVKAENDALLSHNKKLQSEILGLKGCREAASELINLNK 359 + + KK SE LKG E E + NK Sbjct: 299 -----------MATAKKKQDSETERLKGASENEEEDDDYNK 328
>HXC8_RAT (P18866) Homeobox protein Hox-C8 (R4) (Fragment)| Length = 108 Score = 50.4 bits (119), Expect = 2e-06 Identities = 29/69 (42%), Positives = 38/69 (55%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQ 239 Q LEK F L +R+++++ ALGL RQV IWFQNRR +WK E + D L Sbjct: 26 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK---ENNKDKLPGA 82 Query: 240 FDAVKAEND 266 D K E + Sbjct: 83 RDEEKVEEE 91
>NKX61_MESAU (Q60554) Homeobox protein Nkx-6.1| Length = 364 Score = 50.4 bits (119), Expect = 2e-06 Identities = 32/101 (31%), Positives = 45/101 (44%) Frame = +3 Query: 57 EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKR 236 +Q+ LEK FE L + +LA +LG+ QV +WFQNRR +W+ K + Sbjct: 246 QQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAE------- 298 Query: 237 QFDAVKAENDALLSHNKKLQSEILGLKGCREAASELINLNK 359 + + KK SE LKG E E + NK Sbjct: 299 -----------MATAKKKQDSETERLKGTSENEEEDDDYNK 328
>MEOX1_HUMAN (P50221) Homeobox protein MOX-1 (Mesenchyme homeobox 1)| Length = 254 Score = 50.4 bits (119), Expect = 2e-06 Identities = 25/62 (40%), Positives = 35/62 (56%) Frame = +3 Query: 12 DGSQLGGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRAR 191 +GS +++ EQ+R LE F N L R+ ++A L L RQV +WFQNRR + Sbjct: 166 EGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMK 225 Query: 192 WK 197 WK Sbjct: 226 WK 227
>HXC4_RAT (P18865) Homeobox protein Hox-C4 (R3) (Fragment)| Length = 76 Score = 50.4 bits (119), Expect = 2e-06 Identities = 25/56 (44%), Positives = 34/56 (60%) Frame = +3 Query: 57 EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 224 +QV LEK F L R++++A +L L RQ+ IWFQNRR +WK KD+D Sbjct: 21 QQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK-----KDHD 71
>MEOX1_MOUSE (P32442) Homeobox protein MOX-1 (Mesenchyme homeobox 1)| Length = 253 Score = 50.4 bits (119), Expect = 2e-06 Identities = 25/62 (40%), Positives = 35/62 (56%) Frame = +3 Query: 12 DGSQLGGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRAR 191 +GS +++ EQ+R LE F N L R+ ++A L L RQV +WFQNRR + Sbjct: 165 EGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMK 224 Query: 192 WK 197 WK Sbjct: 225 WK 226
>HXC8_MOUSE (P09025) Homeobox protein Hox-C8 (Hox-3.1) (M31)| Length = 242 Score = 50.4 bits (119), Expect = 2e-06 Identities = 29/69 (42%), Positives = 38/69 (55%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQ 239 Q LEK F L +R+++++ ALGL RQV IWFQNRR +WK E + D L Sbjct: 160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK---ENNKDKLPGA 216 Query: 240 FDAVKAEND 266 D K E + Sbjct: 217 RDEEKVEEE 225
>HXC8_HUMAN (P31273) Homeobox protein Hox-C8 (Hox-3A)| Length = 242 Score = 50.4 bits (119), Expect = 2e-06 Identities = 29/69 (42%), Positives = 38/69 (55%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQ 239 Q LEK F L +R+++++ ALGL RQV IWFQNRR +WK E + D L Sbjct: 160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK---ENNKDKLPGA 216 Query: 240 FDAVKAEND 266 D K E + Sbjct: 217 RDEEKVEEE 225
>HXC8_CHICK (Q9YH13) Homeobox protein Hox-C8 (cHoxc-8)| Length = 242 Score = 50.4 bits (119), Expect = 2e-06 Identities = 29/69 (42%), Positives = 38/69 (55%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQ 239 Q LEK F L +R+++++ ALGL RQV IWFQNRR +WK E + D L Sbjct: 160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK---ENNKDKLPGA 216 Query: 240 FDAVKAEND 266 D K E + Sbjct: 217 RDEEKTEEE 225
>HXD8_CHICK (P23459) Homeobox protein Hox-D8 (Chox-M)| Length = 188 Score = 50.4 bits (119), Expect = 2e-06 Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%) Frame = +3 Query: 30 GEKKRRLNVEQVRTLE--KNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 203 G ++ R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK + Sbjct: 94 GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 153 Query: 204 QLEKDYDVLKRQ 239 + + K++ Sbjct: 154 NNKDKFPASKQE 165
>HXB8B_BRARE (Q8JH55) Homeobox protein Hox-B8b (Hox-A8)| Length = 247 Score = 50.4 bits (119), Expect = 2e-06 Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 2/86 (2%) Frame = +3 Query: 21 QLGGEKKRRLNVEQVRTLE--KNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARW 194 Q G ++ R + +TLE K F L +R+++++ AL L RQV IWFQNRR +W Sbjct: 141 QATGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKW 200 Query: 195 KTKQLEKDYDVLKRQFDAVKAENDAL 272 K K+ KD +F + KAE + + Sbjct: 201 K-KEHNKD------KFPSSKAEQEEI 219
>HXD4A_BRARE (O57374) Homeobox protein Hox-D4a (Hox-D4)| Length = 236 Score = 50.4 bits (119), Expect = 2e-06 Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 3/99 (3%) Frame = +3 Query: 27 GGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 G E KR +QV LEK F L R+++ A L L RQ+ IWFQNRR +WK Sbjct: 143 GPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIESAHTLSLSERQIKIWFQNRRMKWK 202 Query: 198 TKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGL 314 KD+ + + + N K Q+EI L Sbjct: 203 -----KDHKLPNTKGRSASVGNQHAQHAQKDSQTEITTL 236
>HXB4_XENLA (P09070) Homeobox protein Hox-B4 (Xhox-1A)| Length = 232 Score = 50.4 bits (119), Expect = 2e-06 Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 3/59 (5%) Frame = +3 Query: 30 GEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 GE KR +QV LEK F L R++++A L L RQ+ IWFQNRR +WK Sbjct: 139 GEAKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWK 197
>HXD8_HETFR (Q9IA12) Homeobox protein Hox-D8| Length = 240 Score = 50.1 bits (118), Expect = 3e-06 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Frame = +3 Query: 30 GEKKRRLNVEQVRTLE--KNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 203 G ++ R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK K Sbjct: 146 GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-K 204 Query: 204 QLEKD 218 + KD Sbjct: 205 ENNKD 209
>HM09_CAEEL (P56407) Homeobox protein ceh-9| Length = 147 Score = 50.1 bits (118), Expect = 3e-06 Identities = 24/54 (44%), Positives = 32/54 (59%) Frame = +3 Query: 57 EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 +QV LEK FE L + +LA+ L + QV IWFQNRR +WK + EK+ Sbjct: 80 KQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKKIESEKE 133
>HMD1_CHICK (P46692) Homeobox protein CHOX-CAD| Length = 248 Score = 49.7 bits (117), Expect = 3e-06 Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Frame = +3 Query: 3 TSDDGSQLGGEKKRRLNVEQVRT-LEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQN 179 TS G +K R + + R LEK F + + RK +LA ALGL RQV IWFQN Sbjct: 128 TSSSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQN 187 Query: 180 RRAR 191 RRA+ Sbjct: 188 RRAK 191
>CDX4_HUMAN (O14627) Homeobox protein CDX-4 (Caudal-type homeobox protein 4)| Length = 284 Score = 49.7 bits (117), Expect = 3e-06 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 1/81 (1%) Frame = +3 Query: 33 EKKRRLNVEQVRT-LEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQL 209 EK R + + R LEK F + +RK +LA LGL RQV IWFQNRRA+ + K + Sbjct: 174 EKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAK-ERKMI 232 Query: 210 EKDYDVLKRQFDAVKAENDAL 272 +K + +V++++D++ Sbjct: 233 KKKISQFENSGGSVQSDSDSI 253
>HXA11_HUMAN (P31270) Homeobox protein Hox-A11 (Hox-1I)| Length = 313 Score = 49.7 bits (117), Expect = 3e-06 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 4/76 (5%) Frame = +3 Query: 3 TSDDGSQLGGEKKRRLNVE----QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIW 170 T D G++ R+ Q+R LE+ F + + E+++QL+R L L RQV IW Sbjct: 229 TEDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIW 288 Query: 171 FQNRRARWKTKQLEKD 218 FQNR R K K++ +D Sbjct: 289 FQNR--RMKEKKINRD 302
>HXB7A_BRARE (Q8AWY9) Homeobox protein Hox-B7a (Hox-B7)| Length = 227 Score = 49.7 bits (117), Expect = 3e-06 Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 3/67 (4%) Frame = +3 Query: 27 GGEKKR-RLNVEQVRTLE--KNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 G ++KR R + +TLE K F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 142 GADRKRGRQTYSRYQTLELEKEFHFNRYLSRRRRIEIAHALCLTERQIKIWFQNRRMKWK 201 Query: 198 TKQLEKD 218 + D Sbjct: 202 KENKSTD 208
>HXA7_MOUSE (P02830) Homeobox protein Hox-A7 (Hox-1.1) (M6-12) (M6)| Length = 229 Score = 49.7 bits (117), Expect = 3e-06 Identities = 26/70 (37%), Positives = 37/70 (52%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQ 239 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK + ++ Sbjct: 140 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDESQAPTAAP 199 Query: 240 FDAVKAENDA 269 DAV + + A Sbjct: 200 EDAVPSVSTA 209
>HXA5_AMBME (P50208) Homeobox protein Hox-A5 (Fragment)| Length = 148 Score = 49.7 bits (117), Expect = 3e-06 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = +3 Query: 24 LGGEKKRRLNVEQVR----TLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRAR 191 +GG + +R R LEK F L R++++A AL L RQ+ IWFQNRR + Sbjct: 68 IGGPRGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMK 127 Query: 192 WK 197 WK Sbjct: 128 WK 129
>NKX61_RAT (O35762) Homeobox protein Nkx-6.1| Length = 365 Score = 49.7 bits (117), Expect = 3e-06 Identities = 23/61 (37%), Positives = 34/61 (55%) Frame = +3 Query: 57 EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKR 236 +Q+ LEK FE L + +LA +LG+ QV +WFQNRR +W+ K + K+ Sbjct: 247 QQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMATAKKK 306 Query: 237 Q 239 Q Sbjct: 307 Q 307
>NKX61_MOUSE (Q99MA9) Homeobox protein Nkx-6.1| Length = 365 Score = 49.7 bits (117), Expect = 3e-06 Identities = 23/61 (37%), Positives = 34/61 (55%) Frame = +3 Query: 57 EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKR 236 +Q+ LEK FE L + +LA +LG+ QV +WFQNRR +W+ K + K+ Sbjct: 247 QQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMATAKKK 306 Query: 237 Q 239 Q Sbjct: 307 Q 307
>HLX1_MOUSE (Q61670) Homeobox protein HLX1| Length = 476 Score = 49.7 bits (117), Expect = 3e-06 Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARW---KTKQLEKDYD 224 Q + LEK FE+ + + QLA LGL QV +WFQNRR +W K Q +KD D Sbjct: 284 QRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKD 341
>GBX2_CHICK (O42230) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) Length = 340 Score = 49.7 bits (117), Expect = 3e-06 Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%) Frame = +3 Query: 30 GEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 G+ +RR EQ+ LEK F L + Q+A AL L QV IWFQNRRA+WK Sbjct: 237 GKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 295
>SCR_DROME (P09077) Homeotic protein Sex combs reduced| Length = 417 Score = 49.7 bits (117), Expect = 3e-06 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 2/59 (3%) Frame = +3 Query: 27 GGEKKRRLNVEQVRTLE--KNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 G K++R + + +TLE K F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 322 GETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 380
>HLX1_HUMAN (Q14774) Homeobox protein HLX1 (Homeobox protein HB24)| Length = 488 Score = 49.7 bits (117), Expect = 3e-06 Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARW---KTKQLEKDYD 224 Q + LEK FE+ + + QLA LGL QV +WFQNRR +W K Q +KD D Sbjct: 287 QRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKD 344
>GBX2_MOUSE (P48031) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) (Homeobox protein STRA7) Length = 348 Score = 49.7 bits (117), Expect = 3e-06 Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%) Frame = +3 Query: 30 GEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 G+ +RR EQ+ LEK F L + Q+A AL L QV IWFQNRRA+WK Sbjct: 245 GKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 303
>GBX2_HUMAN (P52951) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) Length = 348 Score = 49.7 bits (117), Expect = 3e-06 Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%) Frame = +3 Query: 30 GEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 G+ +RR EQ+ LEK F L + Q+A AL L QV IWFQNRRA+WK Sbjct: 245 GKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 303
>GBX2_XENLA (Q91907) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) (XGBX-2) Length = 340 Score = 49.3 bits (116), Expect = 4e-06 Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Frame = +3 Query: 18 SQLGGEKKRR--LNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRAR 191 S G ++RR EQ+ LEK F L + Q+A L L QV IWFQNRRA+ Sbjct: 234 SSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHVLKLSEVQVKIWFQNRRAK 293 Query: 192 WK 197 WK Sbjct: 294 WK 295
>SCR_APIME (P15859) Homeobox protein H55 (Fragment)| Length = 86 Score = 49.3 bits (116), Expect = 4e-06 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 2/59 (3%) Frame = +3 Query: 27 GGEKKRRLNVEQVRTLE--KNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 G K++R + + +TLE K F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 6 GEVKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 64
>HXC4_ORYLA (Q9PVS4) Homeobox protein Hox-C4| Length = 261 Score = 49.3 bits (116), Expect = 4e-06 Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +3 Query: 27 GGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 G E KR +QV LEK F L R++++A L L RQ+ IWFQNRR +WK Sbjct: 151 GTEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWK 210
>HXB6_CHICK (P14839) Homeobox protein Hox-B6 (GHOX-2.2) (Fragment)| Length = 84 Score = 49.3 bits (116), Expect = 4e-06 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = +3 Query: 15 GSQLGGEKKRRLNVEQVRTLE--KNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRA 188 GS G ++ R + +TLE K F L R++++A +L L RQ+ IWFQNRR Sbjct: 1 GSSFGPARRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRM 60 Query: 189 RWK 197 +WK Sbjct: 61 KWK 63
>HXA7_SHEEP (Q28600) Homeobox protein Hox-A7 (Fragment)| Length = 71 Score = 49.3 bits (116), Expect = 4e-06 Identities = 23/52 (44%), Positives = 31/52 (59%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 215 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK + E+ Sbjct: 15 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKEE 66
>HXC6_SHEEP (P49925) Homeobox protein Hox-C6| Length = 153 Score = 49.3 bits (116), Expect = 4e-06 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Frame = +3 Query: 6 SDDGSQLGGEKKRRLNVE---QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 S G G +++R + Q LEK F L R++++A AL L RQ+ IWFQ Sbjct: 49 SHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQ 108 Query: 177 NRRARWK 197 NRR +WK Sbjct: 109 NRRMKWK 115
>HXD8_HUMAN (P13378) Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4)| Length = 290 Score = 49.3 bits (116), Expect = 4e-06 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%) Frame = +3 Query: 30 GEKKRRLNVEQVRTLE--KNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 203 G ++ R + +TLE K F L +R+++++ AL L RQV IWFQNRR +WK K Sbjct: 196 GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWK-K 254 Query: 204 QLEKDYDVLKRQ 239 + KD + RQ Sbjct: 255 ENNKDKFPVSRQ 266
>HXABB_DANAE (Q9DDU2) Homeobox protein Hox-A11b| Length = 283 Score = 49.3 bits (116), Expect = 4e-06 Identities = 25/53 (47%), Positives = 35/53 (66%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 Q+R LE+ F + + E+++QL+R L L RQV IWFQNR R K K+L +D Sbjct: 222 QIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKLNRD 272
>HXABB_BRARE (Q9DDU1) Homeobox protein Hox-A11b (Hox-A11)| Length = 283 Score = 49.3 bits (116), Expect = 4e-06 Identities = 25/53 (47%), Positives = 35/53 (66%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 Q+R LE+ F + + E+++QL+R L L RQV IWFQNR R K K+L +D Sbjct: 222 QIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKLNRD 272
>HXA5_MOUSE (P09021) Homeobox protein Hox-A5 (Hox-1.3) (M2)| Length = 270 Score = 49.3 bits (116), Expect = 4e-06 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = +3 Query: 24 LGGEKKRRLNVEQVR----TLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRAR 191 +GG + +R R LEK F L R++++A AL L RQ+ IWFQNRR + Sbjct: 190 IGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMK 249 Query: 192 WK 197 WK Sbjct: 250 WK 251
>HXA5_HUMAN (P20719) Homeobox protein Hox-A5 (Hox-1C)| Length = 270 Score = 49.3 bits (116), Expect = 4e-06 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = +3 Query: 24 LGGEKKRRLNVEQVR----TLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRAR 191 +GG + +R R LEK F L R++++A AL L RQ+ IWFQNRR + Sbjct: 190 IGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMK 249 Query: 192 WK 197 WK Sbjct: 250 WK 251
>HXA5_CHICK (Q6B3N0) Homeobox protein Hox-A5| Length = 270 Score = 49.3 bits (116), Expect = 4e-06 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = +3 Query: 24 LGGEKKRRLNVEQVR----TLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRAR 191 +GG + +R R LEK F L R++++A AL L RQ+ IWFQNRR + Sbjct: 190 IGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMK 249 Query: 192 WK 197 WK Sbjct: 250 WK 251
>HXA7_CHICK (Q90VZ9) Homeobox protein Hox-A7| Length = 219 Score = 49.3 bits (116), Expect = 4e-06 Identities = 23/52 (44%), Positives = 31/52 (59%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 215 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK + E+ Sbjct: 140 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKEE 191
>HXA7_MORSA (Q9PWD4) Homeobox protein Hox-A7| Length = 225 Score = 49.3 bits (116), Expect = 4e-06 Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 9/65 (13%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK---------TKQLE 212 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK T E Sbjct: 137 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDHKEEPVSTPSGE 196 Query: 213 KDYDV 227 KD D+ Sbjct: 197 KDCDI 201
>HXC6_MOUSE (P10629) Homeobox protein Hox-C6 (Hox-3.3) (Hox-6.1)| Length = 235 Score = 49.3 bits (116), Expect = 4e-06 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Frame = +3 Query: 6 SDDGSQLGGEKKRRLNVE---QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 S G G +++R + Q LEK F L R++++A AL L RQ+ IWFQ Sbjct: 131 SHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQ 190 Query: 177 NRRARWK 197 NRR +WK Sbjct: 191 NRRMKWK 197
>HXC6_HUMAN (P09630) Homeobox protein Hox-C6 (Hox-3C) (HHO.C8) (CP25)| Length = 235 Score = 49.3 bits (116), Expect = 4e-06 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Frame = +3 Query: 6 SDDGSQLGGEKKRRLNVE---QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 S G G +++R + Q LEK F L R++++A AL L RQ+ IWFQ Sbjct: 131 SHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQ 190 Query: 177 NRRARWK 197 NRR +WK Sbjct: 191 NRRMKWK 197
>HXC6A_BRARE (P15862) Homeobox protein Hox-C6a (Hox-C6) (Zf-61)| Length = 231 Score = 49.3 bits (116), Expect = 4e-06 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Frame = +3 Query: 6 SDDGSQLGGEKKRRLNVE---QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 S G G +++R + Q LEK F L R++++A AL L RQ+ IWFQ Sbjct: 132 SHSGVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQ 191 Query: 177 NRRARWK 197 NRR +WK Sbjct: 192 NRRMKWK 198
>HXA7_XENLA (P09071) Homeobox protein Hox-A7 (XlHbox-3) (Xhox-36)| Length = 209 Score = 49.3 bits (116), Expect = 4e-06 Identities = 23/52 (44%), Positives = 31/52 (59%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 215 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK + E+ Sbjct: 133 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKEE 184
>HXA4_MORSA (Q9PWD2) Homeobox protein Hox-A4| Length = 248 Score = 48.9 bits (115), Expect = 6e-06 Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Frame = +3 Query: 12 DGSQLGGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNR 182 + S GG KR +Q LEK F L R++++A + L RQV IWFQNR Sbjct: 141 NASYTGGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNR 200 Query: 183 RARWK 197 R +WK Sbjct: 201 RMKWK 205
>HMB1_TRIGR (P09080) Homeobox protein HB1 (TGHBOX1) (Fragment)| Length = 307 Score = 48.9 bits (115), Expect = 6e-06 Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 2/111 (1%) Frame = +3 Query: 30 GEKKRRLNVEQVRTLE--KNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 203 G K+ R + +TLE K F L R+++L+ LGL RQ+ IWFQNRR ++K + Sbjct: 188 GRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKE 247 Query: 204 QLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLKGCREAASELINLN 356 K+ V + D + E ++ + N + Q+ + G+ + +S +++++ Sbjct: 248 SKNKEEGV-SGEGDG-ENETESTGTENAQTQNAVHGVTILEKPSSLVLHVD 296
>HXA5_HETFR (Q9IA23) Homeobox protein Hox-A5| Length = 275 Score = 48.9 bits (115), Expect = 6e-06 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = +3 Query: 24 LGGEKKRRLNVEQVR----TLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRAR 191 +GG + +R R LEK F L R++++A AL L RQ+ IWFQNRR + Sbjct: 195 MGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 254 Query: 192 WK 197 WK Sbjct: 255 WK 256
>HXD5_HETFR (Q9IA11) Homeobox protein Hox-D5| Length = 252 Score = 48.9 bits (115), Expect = 6e-06 Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Frame = +3 Query: 18 SQLGGEKKRRLNVE-QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARW 194 S L G++ R Q LEK F L R++++A AL L RQ+ IWFQNRR +W Sbjct: 173 SGLEGKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 232 Query: 195 KTKQLEKDYDV 227 K K +V Sbjct: 233 KKDNKLKSINV 243
>SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouch) (Homeobox| protein NK-1) Length = 659 Score = 48.9 bits (115), Expect = 6e-06 Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 4/61 (6%) Frame = +3 Query: 27 GGEKKRRLNV----EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARW 194 GG K RR EQ+ +LE F+ L ++ LA +L L QV IWFQNRR +W Sbjct: 541 GGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKW 600 Query: 195 K 197 K Sbjct: 601 K 601
>HM13_CAEEL (P17488) Homeobox protein ceh-13| Length = 202 Score = 48.9 bits (115), Expect = 6e-06 Identities = 24/64 (37%), Positives = 34/64 (53%) Frame = +3 Query: 30 GEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQL 209 G + Q+ LEK F A + R+ ++A L LQ QV IWFQNRR + K ++ Sbjct: 115 GTNRTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKIWFQNRRMKEKKREK 174 Query: 210 EKDY 221 EK + Sbjct: 175 EKAF 178
>HXB8_PIG (P09078) Homeobox protein Hox-B8 (Hox-2.4) (Fragment)| Length = 93 Score = 48.9 bits (115), Expect = 6e-06 Identities = 22/49 (44%), Positives = 32/49 (65%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQ 206 Q LEK F+ L +R ++++ ALGL RQ+ IWFQNRR +WK ++ Sbjct: 18 QTLELEKEFQCNPYLTCKRWIEVSHALGLTERQIKIWFQNRRMKWKKRE 66
>CDX_LINSA (P81193) Homeobox protein CDX (Caudal-type homeobox protein)| (LSCDX) (Fragment) Length = 70 Score = 48.5 bits (114), Expect = 7e-06 Identities = 24/56 (42%), Positives = 36/56 (64%) Frame = +3 Query: 72 LEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQ 239 LEK F + + RK +LA++L L RQ+ IWFQNRRA K +++ K DV+ ++ Sbjct: 16 LEKEFHYSRYITMNRKAELAKSLDLTERQIKIWFQNRRA--KERKINKKKDVMVKE 69
>HXA11_CHICK (P31258) Homeobox protein Hox-A11 (Ghox-1I) (Chox-1.9)| Length = 297 Score = 48.5 bits (114), Expect = 7e-06 Identities = 24/53 (45%), Positives = 35/53 (66%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 Q+R LE+ F + + E+++QL+R L L RQV IWFQNR R K K++ +D Sbjct: 236 QIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKINRD 286
>LIN39_CAEEL (P34684) Homeobox protein lin-39 (Abnormal cell lineage protein 39)| Length = 253 Score = 48.5 bits (114), Expect = 7e-06 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Frame = +3 Query: 30 GEKKRRLNV--EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 203 GEK++R QV LEK F L +R++++A +L L RQV IWFQNRR + K + Sbjct: 164 GEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKE 223 Query: 204 QLEK 215 +K Sbjct: 224 NKDK 227
>ANTP_DROME (P02833) Homeotic protein antennapedia| Length = 378 Score = 48.5 bits (114), Expect = 7e-06 Identities = 23/52 (44%), Positives = 30/52 (57%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 215 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK + K Sbjct: 308 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 359
>HXA5_RAT (P52949) Homeobox protein Hox-A5 (Hox-1.3) (Fragment)| Length = 233 Score = 48.5 bits (114), Expect = 7e-06 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = +3 Query: 24 LGGEKKRRLNV----EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRAR 191 +GG + +R Q LEK F L R++++A AL L RQ+ IWFQNRR + Sbjct: 169 IGGPEGKRARTCYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMK 228 Query: 192 WK 197 WK Sbjct: 229 WK 230
>ANTP_DROSU (Q24645) Homeotic protein antennapedia| Length = 394 Score = 48.5 bits (114), Expect = 7e-06 Identities = 23/52 (44%), Positives = 30/52 (57%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 215 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK + K Sbjct: 324 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 375
>HXC6_XENLA (P02832) Homeobox protein Hox-C6 (XlHbox-1) (AC1) [Contains:| Homeobox protein Hox-C6 PRII; Homeobox protein Hox-C6 PRI] Length = 234 Score = 48.5 bits (114), Expect = 7e-06 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Frame = +3 Query: 6 SDDGSQLGGEKKRRLNVE---QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 S G G +++R + Q LEK F L R++++A AL L RQ+ IWFQ Sbjct: 131 SHSGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQ 190 Query: 177 NRRARWK 197 NRR +WK Sbjct: 191 NRRMKWK 197
>BAGP_DROME (P22809) Homeobox protein bagpipe (NK-3)| Length = 382 Score = 48.5 bits (114), Expect = 7e-06 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%) Frame = +3 Query: 6 SDDGSQLGGEKKRR--LNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQN 179 S DGS L +K+ R + QV LE+ F L + ++A++L L QV IWFQN Sbjct: 166 SHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQN 225 Query: 180 RRARWKTKQLEK 215 RR + K KQ+++ Sbjct: 226 RRYKTKRKQIQQ 237
>HMH2_DUGTI (Q00401) Homeobox protein DTH-2| Length = 363 Score = 48.1 bits (113), Expect = 1e-05 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 4/144 (2%) Frame = +3 Query: 18 SQLGGEKKRRL--NVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRAR 191 + + +KRR+ + Q+ LE+ F+ L + LA + L P QV IWFQN R + Sbjct: 128 NNMSQRRKRRILFSQAQIYELERRFKQQKYLSAPEREHLANLINLTPTQVKIWFQNHRYK 187 Query: 192 WKTKQLEKDYDVLKRQFDAVKAE--NDALLSHNKKLQSEILGLKGCREAASELINLNKET 365 K Q +K+ + K + +K +D S NK++ + R E + KE+ Sbjct: 188 CKRSQKDKEKEQQKEKSYHLKKNIVDDKERSPNKQICN---ASSSDRSTPEEPVAKAKES 244 Query: 366 EASCSNRSENSSEINLDISRTPPS 437 SN ++ + ++ P S Sbjct: 245 GLDFSNHKIDNLNLKMEADLEPKS 268
>HXD11_HUMAN (P31277) Homeobox protein Hox-D11 (Hox-4F)| Length = 338 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/53 (47%), Positives = 34/53 (64%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 Q+R LE+ F + E+++QL+R L L RQV IWFQNR R K K+L +D Sbjct: 277 QIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKLNRD 327
>SMOX5_SCHMA (Q26604) Homeobox protein SMOX-5| Length = 284 Score = 48.1 bits (113), Expect = 1e-05 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK--TKQLEKDYDVLK 233 Q+ LE NF L P + ++A+ LGL QV WFQNRRA+ K ++LE+D L+ Sbjct: 48 QLNELENNFNRQRYLTPTDRDRIAKHLGLTNTQVITWFQNRRAKLKREAEELERDVMALR 107 Query: 234 RQ 239 +Q Sbjct: 108 KQ 109
>HXABA_BRARE (Q9DDU0) Homeobox protein Hox-A11a| Length = 284 Score = 48.1 bits (113), Expect = 1e-05 Identities = 24/53 (45%), Positives = 35/53 (66%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 Q+R LE+ F + + E+++QL+R L L RQV +WFQNR R K K+L +D Sbjct: 223 QIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKMWFQNR--RMKEKKLNRD 273
>HXD11_CHICK (P24342) Homeobox protein Hox-D11 (Chox-4.6) (GHOX-4.6) (Chox-4E)| Length = 280 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/53 (47%), Positives = 34/53 (64%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 Q+R LE+ F + E+++QL+R L L RQV IWFQNR R K K+L +D Sbjct: 219 QIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKLNRD 269
>HMPB_DROME (P31264) Homeotic protein proboscipedia| Length = 782 Score = 48.1 bits (113), Expect = 1e-05 Identities = 36/126 (28%), Positives = 62/126 (49%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQ 239 Q+ LEK F L R++++A +L L RQV +WFQNRR + K + L K D + Sbjct: 209 QLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDD--EDN 266 Query: 240 FDAVKAENDALLSHNKKLQSEILGLKGCREAASELINLNKETEASCSNRSENSSEINLDI 419 D++K ++D S++ +S +GC E S+ I + +N + +++ N Sbjct: 267 KDSLKGDDDQSDSNSNSKKS----CQGC-ELPSDDIPDSTSNSRGHNNNTPSATNNNPSA 321 Query: 420 SRTPPS 437 P+ Sbjct: 322 GNLTPN 327
>BSH_MOUSE (Q810B3) Brain-specific homeobox protein homolog| Length = 232 Score = 48.1 bits (113), Expect = 1e-05 Identities = 26/55 (47%), Positives = 32/55 (58%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 224 Q+ LEK FE+ L +++LA AL L QV WFQNRR + K KQL K D Sbjct: 121 QLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK-KQLRKSQD 174
>Y749_MIMIV (Q5UP03) Putative homeobox protein R749| Length = 224 Score = 48.1 bits (113), Expect = 1e-05 Identities = 26/61 (42%), Positives = 37/61 (60%) Frame = +3 Query: 36 KKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 215 K+ RL+ E+ LE + N PE + +LA+ +G PRQV IWFQN+R + K LEK Sbjct: 164 KRVRLSDEERNILESQYSKNNFPSPEIRDELAKKIGKTPRQVQIWFQNKRCK-DRKNLEK 222 Query: 216 D 218 + Sbjct: 223 N 223
>HXD11_HETFR (Q9IA15) Homeobox protein Hox-D11| Length = 265 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/53 (47%), Positives = 34/53 (64%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 Q+R LE+ F + E+++QL+R L L RQV IWFQNR R K K+L +D Sbjct: 204 QIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKLSRD 254
>HXB5_MOUSE (P09079) Homeobox protein Hox-B5 (Hox-2.1) (MU-1) (H24.1)| Length = 269 Score = 48.1 bits (113), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 205 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 250
>HXB5_HUMAN (P09067) Homeobox protein Hox-B5 (Hox-2A) (HHO.C10) (HU-1)| Length = 269 Score = 48.1 bits (113), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 205 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 250
>HXB5A_BRARE (P09014) Homeobox protein Hox-B5a (Hox-B5) (Zf-21)| Length = 275 Score = 48.1 bits (113), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 211 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 256
>HXA4A_BRARE (Q9PWL5) Homeobox protein Hox-A4a (Zf-26) (Hoxx4)| Length = 244 Score = 48.1 bits (113), Expect = 1e-05 Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +3 Query: 18 SQLGGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRA 188 S GG KR +Q LEK F L R++++A + L RQV IWFQNRR Sbjct: 141 SYSGGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRM 200 Query: 189 RWK 197 +WK Sbjct: 201 KWK 203
>HXC11_HUMAN (O43248) Homeobox protein Hox-C11| Length = 304 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/53 (47%), Positives = 34/53 (64%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 Q+R LE+ F + E+++QL+R L L RQV IWFQNR R K K+L +D Sbjct: 243 QIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKLSRD 293
>HXA7_COTJA (P24061) Homeobox protein Hox-A7 (Quox-1)| Length = 242 Score = 48.1 bits (113), Expect = 1e-05 Identities = 23/52 (44%), Positives = 30/52 (57%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 215 Q LEK F L R+++ A AL L RQ+ IWFQNRR +WK + E+ Sbjct: 140 QTLELEKEFHFNRYLTRRRRIEYAHALCLTERQIKIWFQNRRMKWKKEHKEE 191
>BSH_CHICK (Q6RFL5) Brain-specific homeobox protein homolog| Length = 233 Score = 48.1 bits (113), Expect = 1e-05 Identities = 26/55 (47%), Positives = 32/55 (58%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 224 Q+ LEK FE+ L +++LA AL L QV WFQNRR + K KQL K D Sbjct: 123 QLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK-KQLRKSQD 176
>BSH_BRARE (Q6R3Q6) Brain-specific homeobox protein homolog| Length = 227 Score = 48.1 bits (113), Expect = 1e-05 Identities = 28/62 (45%), Positives = 34/62 (54%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQ 239 Q+ LEK FE+ L +++LA AL L QV WFQNRR + K KQL K D K Sbjct: 116 QLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK-KQLRKTQDDQKTP 174 Query: 240 FD 245 D Sbjct: 175 ND 176
>HXDBA_BRARE (Q90470) Homeobox protein Hox-D11a (Hox-D11) (Hox-C11)| Length = 263 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/53 (47%), Positives = 34/53 (64%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 Q+R LE+ F + E+++QL+R L L RQV IWFQNR R K K+L +D Sbjct: 202 QIRELEREFFFNVYINKEKRLQLSRMLSLTDRQVKIWFQNR--RMKEKKLNRD 252
>HXB7_RAT (P18864) Homeobox protein Hox-B7| Length = 219 Score = 48.1 bits (113), Expect = 1e-05 Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +3 Query: 27 GGEKKRRLNVE---QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 G E+KR Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 134 GTERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 193
>HMB1_STRPU (P13545) Homeobox protein HB1 (SPHBOX1)| Length = 308 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = +3 Query: 30 GEKKRRLNVEQVRTLE--KNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 203 G K+ R + +TLE K F L R+++L+ LGL RQ+ IWFQNRR ++K + Sbjct: 189 GRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKE 248 Query: 204 QLEKD 218 K+ Sbjct: 249 SKNKE 253
>HXD11_MOUSE (P23813) Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5)| Length = 323 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/53 (47%), Positives = 34/53 (64%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 Q+R LE+ F + E+++QL+R L L RQV IWFQNR R K K+L +D Sbjct: 262 QIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKLNRD 312
>HXA7_HUMAN (P31268) Homeobox protein Hox-A7 (Hox-1A) (Hox 1.1)| Length = 230 Score = 48.1 bits (113), Expect = 1e-05 Identities = 22/52 (42%), Positives = 31/52 (59%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 215 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK + ++ Sbjct: 141 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDE 192
>HM24_CAEEL (Q9NLC2) Homeobox protein ceh-24| Length = 299 Score = 48.1 bits (113), Expect = 1e-05 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Frame = +3 Query: 18 SQLGGEKKRRL--NVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRAR 191 S + +KRR+ + QV LE+ F+ A L + QLA ++ L P QV IWFQN R + Sbjct: 145 SSMSQRRKRRVLFSQAQVYELERRFKQAKYLTAPEREQLANSIRLTPTQVKIWFQNHRYK 204 Query: 192 WKTKQLEK 215 K ++ EK Sbjct: 205 CKRQEKEK 212
>HXB5B_BRARE (P09013) Homeobox protein Hox-B5b (Hox-B5-like) (Zf-54)| Length = 276 Score = 48.1 bits (113), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 212 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 257
>HXA5_MORSA (Q9PWD3) Homeobox protein Hox-A5| Length = 281 Score = 48.1 bits (113), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 216 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 261
>HXB5_CHICK (P14838) Homeobox protein Hox-B5 (Ghox-2.1) (Fragment)| Length = 82 Score = 48.1 bits (113), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 18 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 63
>HXA5_SHEEP (Q28599) Homeobox protein Hox-A5 (Fragment)| Length = 49 Score = 48.1 bits (113), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 1 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 46
>HXA5_SALSA (P09637) Homeobox protein Hox-A5 (S12-B) (Fragment)| Length = 78 Score = 48.1 bits (113), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 12 QTLELEKEFHFNRYLTRRRRIEMAHALCLSERQIKIWFQNRRMKWK 57
>HXD11_NOTVI (P31263) Homeobox protein Hox-D11 (NvHox-2)| Length = 277 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/53 (47%), Positives = 34/53 (64%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 Q+R LE+ F + E+++QL+R L L RQV IWFQNR R K K+L +D Sbjct: 216 QIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKLNRD 266
>HXB6A_BRARE (P15861) Homeobox protein Hox-B6a (Hox-B6) (Zf-22)| Length = 228 Score = 47.8 bits (112), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 161 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 206
>BARX2_MOUSE (O08686) Homeobox protein BarH-like 2| Length = 228 Score = 47.8 bits (112), Expect = 1e-05 Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 7/101 (6%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLE-------KD 218 Q+ LEK F+ L ++ LA++LGL QV W+QNRR +WK L+ K Sbjct: 123 QLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKP 182 Query: 219 YDVLKRQFDAVKAENDALLSHNKKLQSEILGLKGCREAASE 341 K+ E +A N + QS+ L REA+SE Sbjct: 183 KGRPKKNSIPTSEEIEAEEKMNSQAQSQELLESSEREASSE 223
>HM90_APIME (P15860) Homeobox protein H90 (Fragment)| Length = 74 Score = 47.8 bits (112), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 19 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 64
>HM1_CHICK (P13544) Homeobox protein CHOX-1 (Fragment)| Length = 67 Score = 47.8 bits (112), Expect = 1e-05 Identities = 21/55 (38%), Positives = 35/55 (63%) Frame = +3 Query: 51 NVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 215 + Q+ LEK F + L R++++AR+L L+ QV +WFQNRR + K ++ E+ Sbjct: 9 STRQLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERER 63
>MEOX2_RAT (P39020) Homeobox protein MOX-2 (Growth arrest-specific homeobox)| Length = 303 Score = 47.8 bits (112), Expect = 1e-05 Identities = 23/47 (48%), Positives = 29/47 (61%) Frame = +3 Query: 57 EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 EQ+R LE F N L R+ ++A L L RQV +WFQNRR +WK Sbjct: 196 EQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>MEOX2_MOUSE (P32443) Homeobox protein MOX-2 (Mesenchyme homeobox 2)| Length = 303 Score = 47.8 bits (112), Expect = 1e-05 Identities = 23/47 (48%), Positives = 29/47 (61%) Frame = +3 Query: 57 EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 EQ+R LE F N L R+ ++A L L RQV +WFQNRR +WK Sbjct: 196 EQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>MEOX2_XENLA (P39021) Homeobox protein MOX-2| Length = 298 Score = 47.8 bits (112), Expect = 1e-05 Identities = 23/47 (48%), Positives = 29/47 (61%) Frame = +3 Query: 57 EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 EQ+R LE F N L R+ ++A L L RQV +WFQNRR +WK Sbjct: 191 EQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 237
>HXB6_MOUSE (P09023) Homeobox protein Hox-B6 (Hox-2.2) (MH-22A)| Length = 224 Score = 47.8 bits (112), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 157 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 202
>HXB6_HUMAN (P17509) Homeobox protein Hox-B6 (Hox-2B) (Hox-2.2) (HU-2)| Length = 224 Score = 47.8 bits (112), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 157 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 202
>MEOX2_HUMAN (P50222) Homeobox protein MOX-2 (Mesenchyme homeobox 2) (Growth| arrest-specific homeobox) Length = 304 Score = 47.8 bits (112), Expect = 1e-05 Identities = 23/47 (48%), Positives = 29/47 (61%) Frame = +3 Query: 57 EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 EQ+R LE F N L R+ ++A L L RQV +WFQNRR +WK Sbjct: 197 EQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 243
>HXA7_RAT (P09634) Homeobox protein Hox-A7 (Hox-1.1) (R5) (Fragment)| Length = 105 Score = 47.8 bits (112), Expect = 1e-05 Identities = 26/70 (37%), Positives = 36/70 (51%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQ 239 Q LEK F L R +++A AL L RQ+ IWFQNRR +WK + ++ Sbjct: 16 QTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKKEHKDESQAPTAVP 75 Query: 240 FDAVKAENDA 269 DAV + + A Sbjct: 76 EDAVPSVSTA 85
>HXA6_HUMAN (P31267) Homeobox protein Hox-A6 (Hox-1B)| Length = 233 Score = 47.8 bits (112), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 166 QTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWK 211
>HXA6_HETFR (Q9IA24) Homeobox protein Hox-A6| Length = 229 Score = 47.8 bits (112), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 162 QTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWK 207
>DTH1_DUGTI (Q00400) Homeobox protein DTH-1| Length = 533 Score = 47.8 bits (112), Expect = 1e-05 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = +3 Query: 6 SDDGSQLGGEKKRRL--NVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQN 179 + +G ++KRR+ + +Q+ LE++F L + LA +GL P QV IWFQN Sbjct: 368 NSSSGDIGKKRKRRVLFSKKQILELERHFRQKKYLSAPEREHLANLIGLSPTQVKIWFQN 427 Query: 180 RRARWKTKQLEK 215 R + K EK Sbjct: 428 HRYKMKRAHHEK 439
>BARH2_DROME (Q24256) Homeobox protein B-H2 (Homeobox protein BarH2)| Length = 645 Score = 47.8 bits (112), Expect = 1e-05 Identities = 22/46 (47%), Positives = 30/46 (65%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q++TLEK+FE L + +M+LA L L QV W+QNRR +WK Sbjct: 391 QLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWK 436
>HXB7_BOVIN (Q9TT89) Homeobox protein Hox-B7| Length = 217 Score = 47.8 bits (112), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 193
>HMB4_TRIGR (P10179) Homeobox protein HB4 (Fragment)| Length = 107 Score = 47.8 bits (112), Expect = 1e-05 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Frame = +3 Query: 18 SQLGGEKKRRLNVE-QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARW 194 S G KKR + Q LEK F L +R++++AR L L RQV IWFQNRR + Sbjct: 38 SATSGRKKRCPYTKFQTLELEKEFLFNMYLTRDRRLEIARLLSLTERQVKIWFQNRRMKM 97 Query: 195 KTKQLEKDY 221 K + ++Y Sbjct: 98 KKQNRAQNY 106
>NKX31_MOUSE (P97436) Homeobox protein Nkx-3.1| Length = 237 Score = 47.8 bits (112), Expect = 1e-05 Identities = 26/59 (44%), Positives = 33/59 (55%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKR 236 QV LE+ F L + LA+ L L QV IWFQNRR + K KQL +D VL++ Sbjct: 136 QVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQLSEDLGVLEK 194
>CDX2_MOUSE (P43241) Homeobox protein CDX-2 (Caudal-type homeobox protein 2)| Length = 311 Score = 47.8 bits (112), Expect = 1e-05 Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 4/79 (5%) Frame = +3 Query: 15 GSQLGGEKKRRLNV----EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNR 182 GSQ+ K + V Q LEK F + + RK +LA LGL RQV IWFQNR Sbjct: 177 GSQVKTRTKDKYRVVYTDHQRLELEKEFHFSRYITIRRKSELAATLGLSERQVKIWFQNR 236 Query: 183 RARWKTKQLEKDYDVLKRQ 239 RA K ++++K ++Q Sbjct: 237 RA--KERKIKKKQQQQQQQ 253
>HXA7_HETFR (Q9IA25) Homeobox protein Hox-A7| Length = 208 Score = 47.8 bits (112), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 146 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 191
>HXA6_MOUSE (P09092) Homeobox protein Hox-A6 (Hox-1.2) (M5-4)| Length = 232 Score = 47.8 bits (112), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 165 QTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWK 210
>HXA6_CHICK (Q5YLH5) Homeobox protein Hox-A6| Length = 231 Score = 47.8 bits (112), Expect = 1e-05 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A AL L RQ+ IWFQNRR +WK Sbjct: 164 QTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWK 209
>HXC5_XENLA (P09020) Homeobox protein Hox-C5 (XlHbox-5) (Fragment)| Length = 87 Score = 47.4 bits (111), Expect = 2e-05 Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK--TKQLEKD 218 Q LEK F L R++++A L L RQ+ IWFQNRR +WK TK KD Sbjct: 31 QTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDTKVKSKD 85
>CDX2_MESAU (Q04649) Homeobox protein CDX-2 (Caudal-type homeobox protein 2)| Length = 313 Score = 47.4 bits (111), Expect = 2e-05 Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 4/63 (6%) Frame = +3 Query: 15 GSQLGGEKKRRLNV----EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNR 182 GSQ+ K + V Q LEK F + + RK +LA LGL RQV IWFQNR Sbjct: 177 GSQVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNR 236 Query: 183 RAR 191 RA+ Sbjct: 237 RAK 239
>CDX2_HUMAN (Q99626) Homeobox protein CDX-2 (Caudal-type homeobox protein 2)| (CDX-3) Length = 313 Score = 47.4 bits (111), Expect = 2e-05 Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 4/63 (6%) Frame = +3 Query: 15 GSQLGGEKKRRLNV----EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNR 182 GSQ+ K + V Q LEK F + + RK +LA LGL RQV IWFQNR Sbjct: 178 GSQVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNR 237 Query: 183 RAR 191 RA+ Sbjct: 238 RAK 240
>HXC3A_BRARE (P28174) Homeobox protein Hox-C3a (Hox-114) (Zf-114)| Length = 250 Score = 47.4 bits (111), Expect = 2e-05 Identities = 27/82 (32%), Positives = 40/82 (48%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQ 239 Q+ LEK F + L R++++A L L RQ+ IWFQNRR ++K EK K Sbjct: 156 QLLELEKEFHFSAYLCRNRRLEMAELLKLTDRQIKIWFQNRRMKYKKDHKEK--STAKSS 213 Query: 240 FDAVKAENDALLSHNKKLQSEI 305 + + EN L+ S + Sbjct: 214 YTYLGTENQPLIISRSTTDSPV 235
>LBX1_MOUSE (P52955) Transcription factor LBX1| Length = 280 Score = 47.4 bits (111), Expect = 2e-05 Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 11/120 (9%) Frame = +3 Query: 12 DGSQLGGE----KKRR-----LNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVA 164 DG + G+ KKRR Q+ LEK F L P + Q+A+ LGL QV Sbjct: 110 DGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVI 169 Query: 165 IWFQNRRARWK--TKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLKGCREAAS 338 WFQNRRA+ K ++++ D + K+ + + + AL + ++ G GC A S Sbjct: 170 TWFQNRRAKLKRDLEEMKADVESAKKLGPSGQMDIVALAELEQNSEASGGGGGGCGRAKS 229
>LBX1_HUMAN (P52954) Transcription factor LBX1| Length = 280 Score = 47.4 bits (111), Expect = 2e-05 Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 11/120 (9%) Frame = +3 Query: 12 DGSQLGGE----KKRR-----LNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVA 164 DG + G+ KKRR Q+ LEK F L P + Q+A+ LGL QV Sbjct: 110 DGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVI 169 Query: 165 IWFQNRRARWK--TKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLKGCREAAS 338 WFQNRRA+ K ++++ D + K+ + + + AL + ++ G GC A S Sbjct: 170 TWFQNRRAKLKRELEEMKADVESPKKLGPSGQMDIVALAELEQNSEATAGGGGGCGRAKS 229
>NKX22_MOUSE (P42586) Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B)| Length = 273 Score = 47.4 bits (111), Expect = 2e-05 Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 2/77 (2%) Frame = +3 Query: 3 TSDDGSQLGGEKKRRLNVEQVRT--LEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 T G G ++KRR+ + +T LE+ F L + LA + L P QV IWFQ Sbjct: 118 TQGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQ 177 Query: 177 NRRARWKTKQLEKDYDV 227 N R + K + EK +V Sbjct: 178 NHRYKMKRARAEKGMEV 194
>HMX_STRPU (Q26656) Homeobox protein Hmx (SpHmx) (H6-like) (Fragment)| Length = 405 Score = 47.4 bits (111), Expect = 2e-05 Identities = 28/67 (41%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Frame = +3 Query: 9 DDGSQLGGEKKRRLNV----EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 DD Q +KK++ QV LE FEV L + LA L L QV IWFQ Sbjct: 243 DDDDQSPQKKKKKTRTVFSRSQVFQLESTFEVKRYLSSSERAGLAANLHLTETQVKIWFQ 302 Query: 177 NRRARWK 197 NRR +WK Sbjct: 303 NRRNKWK 309
>BARH1_DROME (Q24255) Homeobox protein B-H1 (Homeobox protein BarH1)| Length = 544 Score = 47.4 bits (111), Expect = 2e-05 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Frame = +3 Query: 3 TSDDGSQLGGEKKRR--LNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 TSD ++K R Q++TLEK+FE L + + +LA L L QV W+Q Sbjct: 289 TSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQ 348 Query: 177 NRRARWK 197 NRR +WK Sbjct: 349 NRRTKWK 355
>UBX_DROSI (P83950) Homeotic protein ultrabithorax| Length = 389 Score = 47.0 bits (110), Expect = 2e-05 Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK-QLEKDYDVLKR 236 Q LEK F + L R++++A AL L RQ+ IWFQNRR + K + Q K+ + ++ Sbjct: 306 QTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEK 365 Query: 237 QFDAVKA 257 Q A KA Sbjct: 366 QAQAQKA 372
>UBX_DROME (P83949) Homeotic protein ultrabithorax| Length = 389 Score = 47.0 bits (110), Expect = 2e-05 Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK-QLEKDYDVLKR 236 Q LEK F + L R++++A AL L RQ+ IWFQNRR + K + Q K+ + ++ Sbjct: 306 QTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEK 365 Query: 237 QFDAVKA 257 Q A KA Sbjct: 366 QAQAQKA 372
>NKX22_MESAU (P43697) Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B)| Length = 273 Score = 47.0 bits (110), Expect = 2e-05 Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 2/77 (2%) Frame = +3 Query: 3 TSDDGSQLGGEKKRRLNVEQVRT--LEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 T G G ++KRR+ + +T LE+ F L + LA + L P QV IWFQ Sbjct: 118 TPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQ 177 Query: 177 NRRARWKTKQLEKDYDV 227 N R + K + EK +V Sbjct: 178 NHRYKMKRARAEKGMEV 194
>NKX22_HUMAN (O95096) Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B)| Length = 273 Score = 47.0 bits (110), Expect = 2e-05 Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 2/77 (2%) Frame = +3 Query: 3 TSDDGSQLGGEKKRRLNVEQVRT--LEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 T G G ++KRR+ + +T LE+ F L + LA + L P QV IWFQ Sbjct: 118 TPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQ 177 Query: 177 NRRARWKTKQLEKDYDV 227 N R + K + EK +V Sbjct: 178 NHRYKMKRARAEKGMEV 194
>UBX_JUNCO (Q8T940) Homeotic protein ultrabithorax (JcUbx)| Length = 253 Score = 47.0 bits (110), Expect = 2e-05 Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK-QLEKDYDVLKR 236 Q LEK F + L R++++A AL L RQ+ IWFQNRR + K + Q K+ + ++ Sbjct: 170 QTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEK 229 Query: 237 QFDAVKA 257 Q A KA Sbjct: 230 QAQAQKA 236
>HME30_APIME (P09076) Homeobox protein E30 (Fragment)| Length = 109 Score = 47.0 bits (110), Expect = 2e-05 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%) Frame = +3 Query: 6 SDDGSQLGGEKKR---RLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 S +G E+KR + EQ+ L++ F L R+ QL+R LGL Q+ IWFQ Sbjct: 10 SHNGKNGSPEEKRPRTAFSAEQLARLKREFAENRYLTERRRQQLSRDLGLTEAQIKIWFQ 69 Query: 177 NRRARWKTKQLEKD 218 N+RA+ K +K+ Sbjct: 70 NKRAKIKKASGQKN 83
>HXC5_MOUSE (P32043) Homeobox protein Hox-C5 (Hox-3.4) (Hox-6.2)| Length = 222 Score = 47.0 bits (110), Expect = 2e-05 Identities = 23/57 (40%), Positives = 30/57 (52%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVL 230 Q LEK F L R++++A L L RQ+ IWFQNRR +WK K + L Sbjct: 166 QTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKMKSKEAL 222
>HXC5_HUMAN (Q00444) Homeobox protein Hox-C5 (Hox-3D) (CP11)| Length = 222 Score = 47.0 bits (110), Expect = 2e-05 Identities = 23/57 (40%), Positives = 30/57 (52%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVL 230 Q LEK F L R++++A L L RQ+ IWFQNRR +WK K + L Sbjct: 166 QTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKMKSKEAL 222
>HM30_CAEEL (Q22909) Homeobox protein ceh-30| Length = 299 Score = 47.0 bits (110), Expect = 2e-05 Identities = 24/69 (34%), Positives = 36/69 (52%) Frame = +3 Query: 57 EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKR 236 +Q++ LE FE L + +M LA +GL QV W+QNRR +WK +Q D+L Sbjct: 167 KQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWK-RQATSGMDLLSE 225 Query: 237 QFDAVKAEN 263 + +N Sbjct: 226 PGNLSAVQN 234
>HXBAA_BRARE (Q9PWL7) Homeobox protein Hox-B10a (Hox-B10) (Fragment)| Length = 85 Score = 47.0 bits (110), Expect = 2e-05 Identities = 23/60 (38%), Positives = 37/60 (61%) Frame = +3 Query: 18 SQLGGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 ++ G +K+ + Q+ LEK F L ER+++++R++ L RQV IWFQNRR + K Sbjct: 9 AKAGRKKRCPYSKHQILELEKEFLFNMYLTRERRLEISRSINLTDRQVKIWFQNRRMKLK 68
>HXA4_SHEEP (Q28598) Homeobox protein Hox-A4 (Fragment)| Length = 87 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/47 (46%), Positives = 28/47 (59%) Frame = +3 Query: 57 EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 +QV LEK F L R++++A L L QV IWFQNRR +WK Sbjct: 5 QQVLELEKEFHFNRYLTRRRRIEIAHTLCLSEAQVKIWFQNRRMKWK 51
>HM24_CAEBR (O17319) Homeobox protein ceh-24| Length = 297 Score = 46.6 bits (109), Expect = 3e-05 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%) Frame = +3 Query: 36 KKRRL--NVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQL 209 +KRR+ + QV LE+ F+ A L + QLA ++ L P QV IWFQN R + K ++ Sbjct: 146 RKRRVLFSQAQVYELERRFKQAKYLTAPEREQLANSIRLTPTQVKIWFQNHRYKCKRQEK 205 Query: 210 EK 215 EK Sbjct: 206 EK 207
>HXB6B_BRARE (Q9YGT4) Homeobox protein Hox-B6b (Hox-A7)| Length = 224 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/46 (45%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R+++++ AL L RQ+ IWFQNRR +WK Sbjct: 158 QTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRRMKWK 203
>HXC6B_BRARE (Q9PWM5) Homeobox protein Hox-C6b| Length = 227 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/46 (45%), Positives = 27/46 (58%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A L L RQ+ IWFQNRR +WK Sbjct: 146 QTLELEKEFHYNRYLTRRRRIEIANTLCLSERQIKIWFQNRRMKWK 191
>HXA5A_BRARE (Q9YGT6) Homeobox protein Hox-A5a| Length = 227 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/46 (45%), Positives = 27/46 (58%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A L L RQ+ IWFQNRR +WK Sbjct: 163 QTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 208
>HD10_ENCCU (Q8SW18) Homeobox protein HD-10 (EcHD-10)| Length = 227 Score = 46.6 bits (109), Expect = 3e-05 Identities = 27/84 (32%), Positives = 44/84 (52%) Frame = +3 Query: 39 KRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 ++R Q++ LE+ FE + + + +L LG+ PR V +WFQNRRA K K+L + Sbjct: 34 RKRTTKAQLKVLEETFETNIRPDANMRKKLGEQLGMTPRSVQVWFQNRRA--KIKKLTQK 91 Query: 219 YDVLKRQFDAVKAENDALLSHNKK 290 + + D K + A S + K Sbjct: 92 KMMQQENTDNTKGPDAAHGSSSPK 115
>HME60_APIME (P09075) Homeobox protein E60 (Fragment)| Length = 109 Score = 46.6 bits (109), Expect = 3e-05 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 5/74 (6%) Frame = +3 Query: 12 DGSQLGG---EKKRR--LNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 DG GG EK+ R + EQ+ L++ F L R+ QL+R LGL Q+ IWFQ Sbjct: 10 DGRGNGGTPEEKRPRTAFSGEQLARLKREFAENRYLTERRRQQLSRDLGLNEAQIKIWFQ 69 Query: 177 NRRARWKTKQLEKD 218 N+RA+ K +K+ Sbjct: 70 NKRAKIKKASGQKN 83
>HXB5_XENLA (P09019) Homeobox protein Hox-B5 (XlHbox-4) (Xhox-1B) (Fragment)| Length = 230 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/46 (45%), Positives = 27/46 (58%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A L L RQ+ IWFQNRR +WK Sbjct: 166 QTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 211
>HXB1B_BRARE (Q90423) Homeobox protein Hox-B1b (Hox-A1)| Length = 307 Score = 46.6 bits (109), Expect = 3e-05 Identities = 24/66 (36%), Positives = 35/66 (53%) Frame = +3 Query: 39 KRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 + +Q+ LEK F L R++++A L L QV IWFQNRR + K ++ E Sbjct: 212 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQVKIWFQNRRMKQKKREKEGT 271 Query: 219 YDVLKR 236 V+KR Sbjct: 272 APVIKR 277
>HXB9_XENLA (P31272) Homeobox protein Hox-B9 (XlHbox-6)| Length = 232 Score = 46.6 bits (109), Expect = 3e-05 Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 2/63 (3%) Frame = +3 Query: 36 KKRRLNVEQVRTLE--KNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQL 209 +K+R + +TLE K F+ L +R+ ++AR L L RQV IWFQNR R K K+L Sbjct: 168 RKKRCPYSKYQTLELEKEFKFNMYLTRDRRHEVARLLNLSERQVKIWFQNR--RMKMKKL 225 Query: 210 EKD 218 KD Sbjct: 226 NKD 228
>HXB7_MOUSE (P09024) Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (MH-22B)| Length = 217 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/46 (45%), Positives = 27/46 (58%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A L L RQ+ IWFQNRR +WK Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWK 193
>HXB7_HUMAN (P09629) Homeobox protein Hox-B7 (Hox-2C) (HHO.C1)| Length = 217 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/46 (45%), Positives = 27/46 (58%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A L L RQ+ IWFQNRR +WK Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWK 193
>HXC6_NOTVI (P14858) Homeobox protein Hox-C6 (NvHox-1) (FH-2)| Length = 234 Score = 46.2 bits (108), Expect = 4e-05 Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Frame = +3 Query: 6 SDDGSQLGGEKKRRLNVE---QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 S G G +++R + Q LEK F L R++++A A L RQ+ IWFQ Sbjct: 131 SHSGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANASCLTERQIKIWFQ 190 Query: 177 NRRARWK 197 NRR +WK Sbjct: 191 NRRMKWK 197
>BAX1B_CHICK (Q9DED6) Homeobox protein BarH-like 1b (Bar class homeoprotein| Barx1b) Length = 247 Score = 46.2 bits (108), Expect = 4e-05 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = +3 Query: 30 GEKKRRLNVE-QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 G + R + E Q+ LEK FE L ++ LA +LGL QV W+QNRR +WK Sbjct: 135 GRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWK 191
>BARH2_RAT (O88181) BarH-like 2 homeobox protein (Bar-class homeodomain| protein MBH1) (Homeobox protein B-H1) Length = 384 Score = 46.2 bits (108), Expect = 4e-05 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 8/80 (10%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQL--------EK 215 Q+ LE++FE L + +M LA AL L QV W+QNRR +WK + Sbjct: 240 QLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAG 299 Query: 216 DYDVLKRQFDAVKAENDALL 275 +Y L+R F + + +LL Sbjct: 300 NYSALQRMFPSPYFYHPSLL 319
>BARH2_MOUSE (Q8VIB5) BarH-like 2 homeobox protein (Bar-class homeodomain| protein MBH1) (Homeobox protein B-H1) Length = 384 Score = 46.2 bits (108), Expect = 4e-05 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 8/80 (10%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQL--------EK 215 Q+ LE++FE L + +M LA AL L QV W+QNRR +WK + Sbjct: 240 QLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAG 299 Query: 216 DYDVLKRQFDAVKAENDALL 275 +Y L+R F + + +LL Sbjct: 300 NYSALQRMFPSPYFYHPSLL 319
>HME1A_BRARE (Q04896) Homeobox protein engrailed-1a (Eng1)| Length = 231 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/47 (42%), Positives = 31/47 (65%) Frame = +3 Query: 57 EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 EQ++ L+ F+ + + +R+ LAR LGL Q+ IWFQN+RA+ K Sbjct: 153 EQLQRLKAEFQTSRYITEQRRQALARELGLNESQIKIWFQNKRAKIK 199
>HXD8_MOUSE (P23463) Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4)| Length = 289 Score = 46.2 bits (108), Expect = 4e-05 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%) Frame = +3 Query: 30 GEKKRRLNVEQVRTLE--KNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 203 G ++ R + +TLE K F L +R+++++ L L RQV IWFQNRR +WK K Sbjct: 194 GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHTLALTERQVKIWFQNRRMKWK-K 252 Query: 204 QLEKD 218 + KD Sbjct: 253 ENNKD 257
>HXB7B_XENLA (P04476) Homeobox protein Hox-B7 B (XlHbox-2 B) (P52)| Length = 220 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/46 (45%), Positives = 27/46 (58%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A L L RQ+ IWFQNRR +WK Sbjct: 149 QTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWK 194
>HXB7A_XENLA (Q91771) Homeobox protein Hox-B7 A (XlHbox-2 A) (MM3)| Length = 220 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/46 (45%), Positives = 27/46 (58%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A L L RQ+ IWFQNRR +WK Sbjct: 151 QTLELEKEFHFNRYLTRRRRIEIAHVLCLTERQIKIWFQNRRMKWK 196
>RXA_XENLA (O42201) Retinal homeobox protein Rx-A (xRx1)| Length = 322 Score = 46.2 bits (108), Expect = 4e-05 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 5/102 (4%) Frame = +3 Query: 6 SDDGSQLGGEKKRRLN-----VEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIW 170 SDD Q +KK R N Q+ LE+ FE ++ + + +LA + L +V +W Sbjct: 120 SDDEQQ--PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVW 177 Query: 171 FQNRRARWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQ 296 FQNRRA+W+ ++ K + ++K ++ +LS N+ Q Sbjct: 178 FQNRRAKWRRQE--------KLEVTSMKLQDSPMLSFNRSPQ 211
>RXB_XENLA (O42567) Retinal homeobox protein Rx-B (Rx2A)| Length = 325 Score = 46.2 bits (108), Expect = 4e-05 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 5/102 (4%) Frame = +3 Query: 6 SDDGSQLGGEKKRRLN-----VEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIW 170 SDD Q +KK R N Q+ LE+ FE ++ + + +LA + L +V +W Sbjct: 120 SDDEQQ--PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVW 177 Query: 171 FQNRRARWKTKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQ 296 FQNRRA+W+ ++ K + ++K ++ +LS N+ Q Sbjct: 178 FQNRRAKWRRQE--------KLEVTSMKLQDSPMLSFNRSPQ 211
>OTP_MOUSE (O09113) Homeobox protein orthopedia| Length = 325 Score = 46.2 bits (108), Expect = 4e-05 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%) Frame = +3 Query: 6 SDDGSQLGGEKKRRLNVE----QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWF 173 S G Q G +K++R Q+ LE++F + + + +LA +GL +V +WF Sbjct: 93 SQAGQQQGQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWF 152 Query: 174 QNRRARWKTKQ 206 QNRRA+WK ++ Sbjct: 153 QNRRAKWKKRK 163
>HM05_CAEEL (P20269) Homeobox protein ceh-5| Length = 148 Score = 46.2 bits (108), Expect = 4e-05 Identities = 25/70 (35%), Positives = 39/70 (55%) Frame = +3 Query: 57 EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKR 236 EQ+ LE++F + L + +LA +LGL QV +WFQNRR + K K + + + K Sbjct: 45 EQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQK-KIDSRKFTLQKY 103 Query: 237 QFDAVKAEND 266 F K +N+ Sbjct: 104 NFFYKKVKNN 113
>BARH2_HUMAN (Q9NY43) BarH-like 2 homeobox protein| Length = 387 Score = 46.2 bits (108), Expect = 4e-05 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 8/80 (10%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQL--------EK 215 Q+ LE++FE L + +M LA AL L QV W+QNRR +WK + Sbjct: 243 QLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAG 302 Query: 216 DYDVLKRQFDAVKAENDALL 275 +Y L+R F + + +LL Sbjct: 303 NYSALQRMFPSPYFYHPSLL 322
>BARX1_HUMAN (Q9HBU1) Homeobox protein BarH-like 1| Length = 225 Score = 46.2 bits (108), Expect = 4e-05 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = +3 Query: 30 GEKKRRLNVE-QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 G + R + E Q+ LEK FE L ++ LA +LGL QV W+QNRR +WK Sbjct: 113 GRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWK 169
>BARX1_CHICK (Q9W6D8) Homeobox protein BarH-like 1 (Fragment)| Length = 207 Score = 46.2 bits (108), Expect = 4e-05 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = +3 Query: 30 GEKKRRLNVE-QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 G + R + E Q+ LEK FE L ++ LA +LGL QV W+QNRR +WK Sbjct: 95 GRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWK 151
>RX1_ASTFA (Q9I9D5) Retinal homeobox protein Rx1| Length = 334 Score = 46.2 bits (108), Expect = 4e-05 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 5/98 (5%) Frame = +3 Query: 9 DDGSQLGGEKKRRLN-----VEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWF 173 + G + +KK R N Q+ LE+ FE ++ + + +LA + L +V +WF Sbjct: 131 EQGDEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWF 190 Query: 174 QNRRARWKTKQLEKDYDVLKRQFDAVKAENDALLSHNK 287 QNRRA+W+ ++ K AVK + +LS N+ Sbjct: 191 QNRRAKWRRQE--------KMDASAVKLHDSPMLSFNR 220
>HXC5_NOTVI (P31262) Homeobox protein Hox-C5 (NvHbox-3.4) (Fragment)| Length = 71 Score = 46.2 bits (108), Expect = 4e-05 Identities = 24/57 (42%), Positives = 30/57 (52%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVL 230 Q LEK F L R++++A L L RQ+ IWFQNRR +WK K D L Sbjct: 15 QTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKLKIKDSL 71
>HXC12_MOUSE (P31313) Homeobox protein Hox-C12 (Hox-3.8) (Fragment)| Length = 60 Score = 46.2 bits (108), Expect = 4e-05 Identities = 22/46 (47%), Positives = 30/46 (65%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q+R LE+ F + E+++QL+R L L RQV IWFQNRR + K Sbjct: 12 QIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 57
>HMSA_SALSA (P09636) Homeobox protein S12-A (Fragment)| Length = 75 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/46 (45%), Positives = 27/46 (58%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A L L RQ+ IWFQNRR +WK Sbjct: 12 QTLELEKEFHFNRYLTRRRRVEIAHVLCLTERQIKIWFQNRRMKWK 57
>BARX1_MOUSE (Q9ER42) Homeobox protein BarH-like 1| Length = 254 Score = 46.2 bits (108), Expect = 4e-05 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = +3 Query: 30 GEKKRRLNVE-QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 G + R + E Q+ LEK FE L ++ LA +LGL QV W+QNRR +WK Sbjct: 142 GRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWK 198
>EVX2_MOUSE (P49749) Homeobox even-skipped homolog protein 2 (EVX-2)| Length = 475 Score = 45.8 bits (107), Expect = 5e-05 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%) Frame = +3 Query: 15 GSQLGGEKKRRLNV----EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNR 182 GS G ++ RR EQ+ LEK F N + R+ +LA AL L + +WFQNR Sbjct: 183 GSGSGADQVRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNR 242 Query: 183 RARWKTKQL 209 R + K ++L Sbjct: 243 RMKDKRQRL 251
>EVX2_HUMAN (Q03828) Homeobox even-skipped homolog protein 2 (EVX-2)| Length = 476 Score = 45.8 bits (107), Expect = 5e-05 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%) Frame = +3 Query: 15 GSQLGGEKKRRLNV----EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNR 182 GS G ++ RR EQ+ LEK F N + R+ +LA AL L + +WFQNR Sbjct: 180 GSGSGADQVRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNR 239 Query: 183 RARWKTKQL 209 R + K ++L Sbjct: 240 RMKDKRQRL 248
>CDX1_RAT (Q05095) Homeobox protein CDX-1 (Caudal-type homeobox protein 1)| (Fragment) Length = 123 Score = 45.8 bits (107), Expect = 5e-05 Identities = 24/56 (42%), Positives = 32/56 (57%) Frame = +3 Query: 72 LEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQ 239 LEK F + + RK +LA LGL RQV IWFQNRRA+ + +K ++Q Sbjct: 20 LEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQQQQQ 75
>HXC9_FUGRU (O42502) Homeobox protein Hox-C9 (HOXC-9)| Length = 261 Score = 45.8 bits (107), Expect = 5e-05 Identities = 24/53 (45%), Positives = 30/53 (56%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 Q LEK F L +R+ ++AR L L RQV IWFQNRR + K EK+ Sbjct: 204 QTLELEKEFLFNMYLTRDRRFEVARVLNLTERQVKIWFQNRRMKMKKMNKEKN 256
>HXB3A_BRARE (O42368) Homeobox protein Hox-B3a (Hox-B3)| Length = 417 Score = 45.8 bits (107), Expect = 5e-05 Identities = 25/70 (35%), Positives = 34/70 (48%) Frame = +3 Query: 6 SDDGSQLGGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRR 185 S GS + Q+ LEK F L R++++A L L RQ+ IWFQNRR Sbjct: 173 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR 232 Query: 186 ARWKTKQLEK 215 ++K Q K Sbjct: 233 MKYKKDQKSK 242
>ABDA_SCHGR (P29556) Homeobox protein abdominal-A homolog (Fragment)| Length = 157 Score = 45.8 bits (107), Expect = 5e-05 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 5/86 (5%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK-----TKQLEKDYD 224 Q LEK F + L R++++A AL L RQ+ IWFQNRR + K K++ + Sbjct: 17 QTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQAR 76 Query: 225 VLKRQFDAVKAENDALLSHNKKLQSE 302 + + D +K + + L ++ Q + Sbjct: 77 REREEQDRLKQQQEKKLEQQQQQQQQ 102
>HOX1_HALRO (P28468) Homeobox protein AHox1| Length = 741 Score = 45.8 bits (107), Expect = 5e-05 Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 6/63 (9%) Frame = +3 Query: 27 GGEKKRR------LNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRA 188 G KKRR ++ Q R LEK+F+ + + +LA AL L QV IWFQNRR Sbjct: 639 GTVKKRRKWNRAVFSLMQRRGLEKSFQSQKYVAKPERRKLADALSLTDAQVKIWFQNRRM 698 Query: 189 RWK 197 +W+ Sbjct: 699 KWR 701
>CDX4_MOUSE (Q07424) Homeobox protein CDX-4 (Caudal-type homeobox protein 4)| Length = 282 Score = 45.8 bits (107), Expect = 5e-05 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%) Frame = +3 Query: 33 EKKRRLNVEQVRT-LEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQL 209 EK R + + R LEK F + RK +LA LGL RQV IWFQNRRA+ + K + Sbjct: 172 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAK-ERKMI 230 Query: 210 EKDYDVLKRQFDAVKAENDAL 272 +K + +V++++ ++ Sbjct: 231 KKKISQFENTGGSVQSDSGSI 251
>NKX25_RAT (O35767) Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E)| (rNKx-2.5) Length = 318 Score = 45.8 bits (107), Expect = 5e-05 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 5/78 (6%) Frame = +3 Query: 12 DGSQLGGEKKRR-----LNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 DG++ ++RR + QV LE+ F+ L P + QLA L L QV IWFQ Sbjct: 127 DGAERRRPRRRRKPRVLFSQAQVYELERRFKQQRYLSPAERDQLASVLKLTSTQVKIWFQ 186 Query: 177 NRRARWKTKQLEKDYDVL 230 NRR + K ++ ++ ++L Sbjct: 187 NRRYKCKRQRQDQTLELL 204
>MAB5_CAEEL (P10038) Homeobox protein mab-5 (Protein male abnormal 5)| Length = 200 Score = 45.8 bits (107), Expect = 5e-05 Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Frame = +3 Query: 15 GSQLGGEKKRRLNV---EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRR 185 G GGE KR Q LEK F L +R+ +++ L L RQV IWFQNRR Sbjct: 110 GGAKGGESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRR 169 Query: 186 ARWK 197 + K Sbjct: 170 MKHK 173
>RX2_CHICK (Q9PVX0) Retinal homeobox protein Rx2 (cRax2)| Length = 317 Score = 45.8 bits (107), Expect = 5e-05 Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 5/101 (4%) Frame = +3 Query: 33 EKKRRLN-----VEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 +KK R N Q+ LE+ FE ++ + + +LA + L +V +WFQNRRA+W+ Sbjct: 119 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 178 Query: 198 TKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLKG 320 ++ K + ++K ++ +LS ++ Q+ +G G Sbjct: 179 RQE--------KLEVSSMKLQDSPILSFSRSPQAAPVGALG 211
>HXC5A_BRARE (P09074) Homeobox protein Hox-C5a (Hox-C5) (Hox-3.4) (Zf-25)| Length = 232 Score = 45.8 bits (107), Expect = 5e-05 Identities = 21/46 (45%), Positives = 27/46 (58%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q LEK F L R++++A L L RQ+ IWFQNRR +WK Sbjct: 176 QTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWK 221
>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)| Length = 606 Score = 45.4 bits (106), Expect = 6e-05 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Frame = +3 Query: 3 TSDDGSQLGGEKKRR--LNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQ 176 TSD ++K R Q++TLEK+FE L + + +LA L L QV W+Q Sbjct: 321 TSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQ 380 Query: 177 NRRARW 194 NRR +W Sbjct: 381 NRRTKW 386
>SAX1_CHICK (P19601) Homeobox protein SAX-1 (CHOX-3) (Fragment)| Length = 232 Score = 45.4 bits (106), Expect = 6e-05 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 13/76 (17%) Frame = +3 Query: 9 DDGSQLGGEKKRR-------------LNVEQVRTLEKNFEVANKLEPERKMQLARALGLQ 149 + GS GG ++R EQ+ LE F L ++ LA +L L Sbjct: 46 EPGSPRGGRRRRAEASCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLT 105 Query: 150 PRQVAIWFQNRRARWK 197 QV IWFQNRR +WK Sbjct: 106 ETQVKIWFQNRRTKWK 121
>HME2B_XENLA (P52730) Homeobox protein engrailed-2-B (En-2B) (EN2 MABEN)| Length = 265 Score = 45.4 bits (106), Expect = 6e-05 Identities = 29/82 (35%), Positives = 42/82 (51%) Frame = +3 Query: 57 EQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKR 236 EQ++ L+ F+ L +R+ LA+ LGL Q+ IWFQN+RA K K+ + + L Sbjct: 186 EQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWFQNKRA--KIKKSTGNKNSLAL 243 Query: 237 QFDAVKAENDALLSHNKKLQSE 302 A N A S + K SE Sbjct: 244 HLMAQGLYNHATTSKDGKSDSE 265
>HXA2_RAT (P31246) Homeobox protein Hox-A2 (Hox-1.11)| Length = 372 Score = 45.4 bits (106), Expect = 6e-05 Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 5/108 (4%) Frame = +3 Query: 12 DGSQLGGEKKRRLNVE-QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRA 188 DGS G + R Q+ LEK F L R++++A L L RQV +WFQNRR Sbjct: 133 DGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRM 192 Query: 189 RWK----TKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLKG 320 + K K+ + K D+ K E D K L + L + G Sbjct: 193 KHKRQTQCKENQNSEGKFKNLEDSDKVEED---EEEKSLFEQALSVSG 237
>HXA2_MOUSE (P31245) Homeobox protein Hox-A2 (Hox-1.11) (Hox1.11)| Length = 372 Score = 45.4 bits (106), Expect = 6e-05 Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 5/108 (4%) Frame = +3 Query: 12 DGSQLGGEKKRRLNVE-QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRA 188 DGS G + R Q+ LEK F L R++++A L L RQV +WFQNRR Sbjct: 133 DGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRM 192 Query: 189 RWK----TKQLEKDYDVLKRQFDAVKAENDALLSHNKKLQSEILGLKG 320 + K K+ + K D+ K E D K L + L + G Sbjct: 193 KHKRQTQCKENQNSEGKFKNLEDSDKVEED---EEEKSLFEQALSVSG 237
>BARH1_RAT (P63156) BarH-like 1 homeobox protein (Bar-class homeodomain| protein MBH2) (BarH-related homeobox protein 1) Length = 327 Score = 45.4 bits (106), Expect = 6e-05 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 8/82 (9%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQL--------EK 215 Q+ LE++FE L + +M+LA +L L QV W+QNRR +WK + Sbjct: 189 QLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAG 248 Query: 216 DYDVLKRQFDAVKAENDALLSH 281 +Y L+R F + +L+S+ Sbjct: 249 NYSALQRMFPSPYFYPQSLVSN 270
>BARH1_MOUSE (P63157) BarH-like 1 homeobox protein (Bar-class homeodomain| protein MBH2) (BarH-related homeobox protein 1) Length = 327 Score = 45.4 bits (106), Expect = 6e-05 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 8/82 (9%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQL--------EK 215 Q+ LE++FE L + +M+LA +L L QV W+QNRR +WK + Sbjct: 189 QLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAG 248 Query: 216 DYDVLKRQFDAVKAENDALLSH 281 +Y L+R F + +L+S+ Sbjct: 249 NYSALQRMFPSPYFYPQSLVSN 270
>BARH1_HUMAN (Q9BZE3) BarH-like 1 homeobox protein| Length = 327 Score = 45.4 bits (106), Expect = 6e-05 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 8/82 (9%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQL--------EK 215 Q+ LE++FE L + +M+LA +L L QV W+QNRR +WK + Sbjct: 189 QLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAG 248 Query: 216 DYDVLKRQFDAVKAENDALLSH 281 +Y L+R F + +L+S+ Sbjct: 249 NYSALQRMFPSPYFYPQSLVSN 270
>CAD_DROME (P09085) Homeotic protein caudal| Length = 427 Score = 45.4 bits (106), Expect = 6e-05 Identities = 29/75 (38%), Positives = 39/75 (52%) Frame = +3 Query: 72 LEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQFDAV 251 LEK + + + RK +LA+ L L RQV IWFQNRRA+ + KQ +K D Sbjct: 288 LEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAK-ERKQNKKGSDPNVMGVGVQ 346 Query: 252 KAENDALLSHNKKLQ 296 A+ LL KL+ Sbjct: 347 HADYSQLLDAKAKLE 361
>ABDA_TRICA (Q07961) Homeobox protein abdominal-A homolog| Length = 343 Score = 45.4 bits (106), Expect = 6e-05 Identities = 26/81 (32%), Positives = 42/81 (51%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQ 239 Q LEK F + L R++++A AL L RQ+ IWFQNRR + L+K+ +K Sbjct: 227 QTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK-----LKKELRAVKEI 281 Query: 240 FDAVKAENDALLSHNKKLQSE 302 + + E + H ++ Q + Sbjct: 282 NEQARREREEQERHKQQQQEK 302
>HXB3_CHICK (P23682) Homeobox protein Hox-B3 (Chox-2.7)| Length = 399 Score = 45.4 bits (106), Expect = 6e-05 Identities = 24/67 (35%), Positives = 33/67 (49%) Frame = +3 Query: 15 GSQLGGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARW 194 GS + Q+ LEK F L R++++A L L RQ+ IWFQNRR ++ Sbjct: 155 GSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKY 214 Query: 195 KTKQLEK 215 K Q K Sbjct: 215 KKDQKSK 221
>HXB3_HUMAN (P14651) Homeobox protein Hox-B3 (Hox-2G) (Hox-2.7)| Length = 431 Score = 45.4 bits (106), Expect = 6e-05 Identities = 25/70 (35%), Positives = 34/70 (48%) Frame = +3 Query: 6 SDDGSQLGGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRR 185 S GS + Q+ LEK F L R++++A L L RQ+ IWFQNRR Sbjct: 181 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR 240 Query: 186 ARWKTKQLEK 215 ++K Q K Sbjct: 241 MKYKKDQKAK 250
>HM8_XENLA (P14837) Homeobox protein 8 (XlHbox-8)| Length = 271 Score = 45.4 bits (106), Expect = 6e-05 Identities = 25/71 (35%), Positives = 38/71 (53%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQ 239 Q+ LEK F + R+++LA L L R + IWFQNRR +WK ++ +K + Sbjct: 158 QLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEEDKKRGRGSDPE 217 Query: 240 FDAVKAENDAL 272 D+V + D L Sbjct: 218 QDSVVSSADVL 228
>HXC9A_BRARE (Q9YGS6) Homeobox protein Hox-C9a (Hox-C9)| Length = 260 Score = 45.4 bits (106), Expect = 6e-05 Identities = 24/53 (45%), Positives = 30/53 (56%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 Q LEK F L +R+ ++AR L L RQV IWFQNRR + K EK+ Sbjct: 203 QTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKMNKEKN 255
>HXD10_MOUSE (P28359) Homeobox protein Hox-D10 (Hox-4.5) (Hox-5.3)| Length = 340 Score = 45.4 bits (106), Expect = 6e-05 Identities = 24/62 (38%), Positives = 34/62 (54%) Frame = +3 Query: 27 GGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQ 206 G EK+ Q LEK F L ER++++++++ L RQV IWFQNRR + K Sbjct: 266 GREKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMS 325 Query: 207 LE 212 E Sbjct: 326 RE 327
>HXB3_MOUSE (P09026) Homeobox protein Hox-B3 (Hox-2.7) (MH-23)| Length = 433 Score = 45.4 bits (106), Expect = 6e-05 Identities = 25/70 (35%), Positives = 34/70 (48%) Frame = +3 Query: 6 SDDGSQLGGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRR 185 S GS + Q+ LEK F L R++++A L L RQ+ IWFQNRR Sbjct: 184 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR 243 Query: 186 ARWKTKQLEK 215 ++K Q K Sbjct: 244 MKYKKDQKAK 253
>HMA2_HELTR (P17138) Homeobox protein HTR-A2 (Fragment)| Length = 60 Score = 45.4 bits (106), Expect = 6e-05 Identities = 20/46 (43%), Positives = 28/46 (60%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 Q+ LEK F + R+++LA +L L R + IWFQNRR +WK Sbjct: 12 QLFELEKEFHFDKYISRPRRVELASSLNLTERHIKIWFQNRRMKWK 57
>HXAAB_BRARE (Q8AWY2) Homeobox protein Hox-A10b (Hox-A10)| Length = 330 Score = 45.1 bits (105), Expect = 8e-05 Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = +3 Query: 30 GEKKR-RLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQ 206 G KKR Q LEK F L ER+++++R++ L RQV IWFQNRR + K Sbjct: 256 GRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMS 315 Query: 207 LEKDYDVLKRQF 242 E L F Sbjct: 316 RENRIRELSANF 327
>HM14_CAEEL (P20271) Homeobox protein ceh-14| Length = 351 Score = 45.1 bits (105), Expect = 8e-05 Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 2/83 (2%) Frame = +3 Query: 27 GGEKKRR--LNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKT 200 G K+ R ++ + + TL++ ++ ++K + QLA GL R V +WFQNRRA K Sbjct: 178 GSNKRPRTTISAKSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQVWFQNRRA--KE 235 Query: 201 KQLEKDYDVLKRQFDAVKAENDA 269 K+L+KD +R + +AE+D+ Sbjct: 236 KRLKKDAG--RRWKSSNRAESDS 256
>HXB1_CYPCA (Q90346) Homeobox protein Hox-B1| Length = 315 Score = 45.1 bits (105), Expect = 8e-05 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Frame = +3 Query: 24 LGGEKKRRLN--VEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 LG + R N +Q+ LEK F + L R++++A L L QV IWFQNRR + K Sbjct: 218 LGPQNTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQK 277 Query: 198 TKQLE 212 ++ E Sbjct: 278 KREKE 282
>HXB1A_BRARE (O42366) Homeobox protein Hox-B1a (Hox-B1)| Length = 311 Score = 45.1 bits (105), Expect = 8e-05 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Frame = +3 Query: 24 LGGEKKRRLN--VEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 LG + R N +Q+ LEK F + L R++++A L L QV IWFQNRR + K Sbjct: 214 LGPQNTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQK 273 Query: 198 TKQLE 212 ++ E Sbjct: 274 KREKE 278
>CDX1_HUMAN (P47902) Homeobox protein CDX-1 (Caudal-type homeobox protein 1)| Length = 265 Score = 45.1 bits (105), Expect = 8e-05 Identities = 22/40 (55%), Positives = 26/40 (65%) Frame = +3 Query: 72 LEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRAR 191 LEK F + + RK +LA LGL RQV IWFQNRRA+ Sbjct: 169 LEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 208
>HXA9_MORSA (Q9PWD5) Homeobox protein Hox-A9| Length = 269 Score = 45.1 bits (105), Expect = 8e-05 Identities = 25/53 (47%), Positives = 31/53 (58%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 Q+ LEK F L +R+ ++AR L L RQV IWFQNR R K K+ KD Sbjct: 213 QILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNR--RMKMKKFNKD 263
>HXA10_HUMAN (P31260) Homeobox protein Hox-A10 (Hox-1H) (Hox-1.8) (PL)| Length = 393 Score = 45.1 bits (105), Expect = 8e-05 Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Frame = +3 Query: 30 GEKKR-RLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQ 206 G KKR Q LEK F L ER+++++R++ L RQV IWFQNRR + K Sbjct: 319 GRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMN 378 Query: 207 LEKDYDVLKRQFD 245 E L F+ Sbjct: 379 RENRIRELTANFN 391
>HXA9_FUGRU (O42506) Homeobox protein Hox-A9 (HoxA-9)| Length = 283 Score = 45.1 bits (105), Expect = 8e-05 Identities = 25/53 (47%), Positives = 31/53 (58%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 218 Q+ LEK F L +R+ ++AR L L RQV IWFQNR R K K+ KD Sbjct: 227 QILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNR--RMKMKKFNKD 277
>HOX3_BRAFL (P50901) Homeobox protein HOX3| Length = 411 Score = 45.1 bits (105), Expect = 8e-05 Identities = 24/67 (35%), Positives = 34/67 (50%) Frame = +3 Query: 15 GSQLGGEKKRRLNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARW 194 G G + Q+ LEK F L R++++A L L RQ+ IWFQNRR ++ Sbjct: 131 GGAAGKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQIKIWFQNRRMKY 190 Query: 195 KTKQLEK 215 K +Q K Sbjct: 191 KKEQKVK 197
>HMEN_ARTSF (Q05640) Homeobox protein engrailed| Length = 349 Score = 45.1 bits (105), Expect = 8e-05 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Frame = +3 Query: 33 EKKRR--LNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQ 206 EK+ R EQ+ L+ F L R+ LAR LGL Q+ IWFQN RA+ K Sbjct: 249 EKRPRTAFTAEQLSRLKHEFNENRYLTERRRQDLARELGLHENQIKIWFQNNRAKLKKSS 308 Query: 207 LEKD 218 +K+ Sbjct: 309 GQKN 312
>LHX4_HUMAN (Q969G2) LIM/homeobox protein Lhx4| Length = 367 Score = 45.1 bits (105), Expect = 8e-05 Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 10/97 (10%) Frame = +3 Query: 9 DDGSQLGGEKKRR-LNVEQVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRR 185 +D S+ G ++ R + +Q+ TL+ ++ + K + QL+ GL R V +WFQNRR Sbjct: 127 NDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRR 186 Query: 186 ARWKTKQLEKD---------YDVLKRQFDAVKAENDA 269 A K K+L+KD Y +KR + K E ++ Sbjct: 187 A--KEKRLKKDAGRHRWGQFYKSVKRSRGSSKQEKES 221
>HXC9_ORYLA (Q9PVQ9) Homeobox protein Hox-C9| Length = 262 Score = 45.1 bits (105), Expect = 8e-05 Identities = 24/52 (46%), Positives = 29/52 (55%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 215 Q LEK F L +R+ ++AR L L RQV IWFQNRR + K EK Sbjct: 205 QTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKMNKEK 256
>BSH_DROME (Q04787) Brain-specific homeobox protein| Length = 427 Score = 45.1 bits (105), Expect = 8e-05 Identities = 25/52 (48%), Positives = 31/52 (59%) Frame = +3 Query: 60 QVRTLEKNFEVANKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 215 Q+ LEK FE L +++LA ALGL QV WFQNRR + K KQL + Sbjct: 283 QLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK-KQLRR 333 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,146,229 Number of Sequences: 219361 Number of extensions: 542140 Number of successful extensions: 3975 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 3851 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3968 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
