ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast59d12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ353856.1| Triticum aestivum homeodomain-leucine zipper transcription factor TaHDZipI-2 mRNA, complete cds Length = 1126 Score = 777 bits (392), Expect = 0.0 Identities = 434/448 (96%) Strand = Plus / Plus Query: 1 agacctcggacgacgggtcgcagctgggcggcgagaagaagcggcggctgaacgtggagc 60 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 agacgtcggacgacgggtcgcagctgggcggcgagaagaagcggcggctgaacgtggagc 387 Query: 61 aggtgcgcacgctggagaagaacttcgaggtggccaacaagctggagccggagcgcaaga 120 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 aggtgcggacgctggagaagaacttcgaggtggccaacaagctggagccggagcgcaaga 447 Query: 121 tgcagctggcgcgcgcgctgggtctacagccccggcaggttgccatctggttccagaacc 180 |||||||||| ||||||||||| || ||||| |||||||| ||||||||||||||||||| Sbjct: 448 tgcagctggcccgcgcgctggggctgcagccgcggcaggtggccatctggttccagaacc 507 Query: 181 gccgcgcccgctggaagacaaagcagctggagaaggactacgacgtgctcaagcgccagt 240 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 gccgcgcccggtggaagacaaagcagctggagaaggactacgacgtgctcaagcgccagt 567 Query: 241 tcgacgccgtcaaggccgagaacgacgccctcctctcccacaacaagaagctccagtccg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 tcgacgccgtcaaggccgagaacgacgccctcctctcccacaacaagaagctccagtccg 627 Query: 301 agatactgggactgaagggctgcagggaggcggcgtcggagctgatcaacctcaacaagg 360 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 628 agatactgggactgaaggaatgcagggaggcggcgtcggagctgatcaacctcaacaagg 687 Query: 361 agacggaggcgtcctgtagcaaccgcagcgagaacagctccgagatcaacctcgacatct 420 |||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 688 agacggaggcgtcctgcagctaccgcagcgagaacagctctgagatcaacctcgacatct 747 Query: 421 cgcgcacgccgccgtccgacggccccat 448 || ||||||||||||||||||||||||| Sbjct: 748 cgggcacgccgccgtccgacggccccat 775
>ref|XM_470308.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1571 Score = 515 bits (260), Expect = e-143 Identities = 393/436 (90%), Gaps = 6/436 (1%) Strand = Plus / Plus Query: 6 tcggacgacgggtcgcagctgggcggcgagaagaagcggcggctgaacgtggagcaggtg 65 |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| Sbjct: 361 tcggacgacgggtcgcag---gccggggagaagaagcggcggctgaacgtggagcaggtg 417 Query: 66 cgcacgctggagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcag 125 || ||||||||||||||||||||| | | |||||||||||||||||||| ||||||||| Sbjct: 418 cggacgctggagaagaacttcgagctcgggaacaagctggagccggagcggaagatgcag 477 Query: 126 ctggcgcgcgcgctgggtctacagccccggcaggttgccatctggttccagaaccgccgc 185 || || |||||||| || || ||||| || ||||| |||||||||||||||||||||||| Sbjct: 478 ctcgcccgcgcgctcgggctgcagccgcgtcaggtggccatctggttccagaaccgccgc 537 Query: 186 gcccgctggaagacaaagcagctggagaaggactacgacgtgctcaagcgccagttcgac 245 || | |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 538 gcgaggtggaagacgaagcagctggagaaggactacgacgcgctcaagcgccagctcgac 597 Query: 246 gccgtcaaggccgagaacgacgccctcctctcccacaacaagaagctccagtccgagata 305 ||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||| Sbjct: 598 gccgtcaaggccgagaacgacgcgctcctcaaccacaacaagaagctccaagccgagata 657 Query: 306 ctgggactgaagggctgcagggaggcggcgtcggagctgatcaacctcaacaaggagacg 365 ||| ||||||| | ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 658 gtggcgctgaagg---ggagggaggcggcgtcggagctgataaacctgaacaaggagacg 714 Query: 366 gaggcgtcctgtagcaaccgcagcgagaacagctccgagatcaacctcgacatctcgcgc 425 |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 715 gaggcgtcgtgcagcaaccgcagcgagaatagctccgagatcaacctcgacatctcgcgc 774 Query: 426 acgccgccgtccgacg 441 ||||||||| |||||| Sbjct: 775 acgccgccgcccgacg 790
>gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete sequence Length = 117931 Score = 361 bits (182), Expect = 1e-96 Identities = 248/270 (91%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct: 19951 gagaagaagcggcggctgaacgtggagcaggtgcggacgctggagaagaacttcgagctc 20010 Query: 93 gccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacagccc 152 | |||||||||||||||||||| ||| ||||||||||||| || || || || ||||| Sbjct: 20011 gggaacaagctggagccggagcggaagctgcagctggcgcgtgcccttggcctgcagccg 20070 Query: 153 cggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagctggag 212 |||||||| |||||||||||||||||||| ||||| || |||||||| |||||||||||| Sbjct: 20071 cggcaggtggccatctggttccagaaccggcgcgcgcggtggaagacgaagcagctggag 20130 Query: 213 aaggactacgacgtgctcaagcgccagttcgacgccgtcaaggccgagaacgacgccctc 272 ||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 20131 aaggactacgacgcgctcaagcgccagctcgacgccgtcaaggccgacaacgacgccctc 20190 Query: 273 ctctcccacaacaagaagctccagtccgag 302 |||||||||||||||||||||||| ||||| Sbjct: 20191 ctctcccacaacaagaagctccaggccgag 20220 Score = 216 bits (109), Expect = 5e-53 Identities = 141/151 (93%), Gaps = 3/151 (1%) Strand = Plus / Plus Query: 301 agatactgggactgaagggctgcagggaggcgg---cgtcggagctgatcaacctcaaca 357 ||||||||| |||||||| |||||||||| | |||||||||||||||||||||||| Sbjct: 21215 agatactggcgctgaagggaggcagggaggcagggtcgtcggagctgatcaacctcaaca 21274 Query: 358 aggagacggaggcgtcctgtagcaaccgcagcgagaacagctccgagatcaacctcgaca 417 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 21275 aggagacggaggcgtcctgcagcaaccgcagcgagaacagctccgagatcaacctcgaca 21334 Query: 418 tctcgcgcacgccgccgtccgacggccccat 448 |||||||||||||||||||||| |||||||| Sbjct: 21335 tctcgcgcacgccgccgtccgagggccccat 21365
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 349 bits (176), Expect = 5e-93 Identities = 262/290 (90%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 6 tcggacgacgggtcgcagctgggcggcgagaagaagcggcggctgaacgtggagcaggtg 65 |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| Sbjct: 3768186 tcggacgacgggtcgcag---gccggggagaagaagcggcggctgaacgtggagcaggtg 3768130 Query: 66 cgcacgctggagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcag 125 || ||||||||||||||||||||| | | |||||||||||||||||||| ||||||||| Sbjct: 3768129 cggacgctggagaagaacttcgagctcgggaacaagctggagccggagcggaagatgcag 3768070 Query: 126 ctggcgcgcgcgctgggtctacagccccggcaggttgccatctggttccagaaccgccgc 185 || || |||||||| || || ||||| || ||||| |||||||||||||||||||||||| Sbjct: 3768069 ctcgcccgcgcgctcgggctgcagccgcgtcaggtggccatctggttccagaaccgccgc 3768010 Query: 186 gcccgctggaagacaaagcagctggagaaggactacgacgtgctcaagcgccagttcgac 245 || | |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 3768009 gcgaggtggaagacgaagcagctggagaaggactacgacgcgctcaagcgccagctcgac 3767950 Query: 246 gccgtcaaggccgagaacgacgccctcctctcccacaacaagaagctcca 295 ||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 3767949 gccgtcaaggccgagaacgacgcgctcctcaaccacaacaagaagctcca 3767900 Score = 186 bits (94), Expect = 4e-44 Identities = 112/118 (94%) Strand = Plus / Minus Query: 324 agggaggcggcgtcggagctgatcaacctcaacaaggagacggaggcgtcctgtagcaac 383 ||||||||||||||||||||||| ||||| |||||||||||||||||||| || |||||| Sbjct: 3767030 agggaggcggcgtcggagctgataaacctgaacaaggagacggaggcgtcgtgcagcaac 3766971 Query: 384 cgcagcgagaacagctccgagatcaacctcgacatctcgcgcacgccgccgtccgacg 441 ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3766970 cgcagcgagaatagctccgagatcaacctcgacatctcgcgcacgccgccgcccgacg 3766913 Score = 93.7 bits (47), Expect = 5e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 30 ggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgag 89 ||||||||||||||||||||| |||||||||||||| | |||||| || |||||| Sbjct: 4635299 ggcgagaagaagcggcggctggcgctggagcaggtgcgcgctctggagcggagcttcgac 4635358 Query: 90 gtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacag 149 || |||||||||||| ||||| |||||| | | ||||||| || || || ||| Sbjct: 4635359 acggacaacaagctggacccggaccgcaaggcccgcatcgcgcgcgacctcggcctgcag 4635418 Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 || || ||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 4635419 ccgcgccaggtcgccgtctggttccagaaccgccgcgcccggtggaagacgaagcagct 4635477 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 155 gcaggttgccatctggttccagaaccgccgcgcccgc 191 |||||| ||| |||||||||||||||||||||||||| Sbjct: 5149837 gcaggtcgccgtctggttccagaaccgccgcgcccgc 5149801
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 349 bits (176), Expect = 5e-93 Identities = 262/290 (90%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 6 tcggacgacgggtcgcagctgggcggcgagaagaagcggcggctgaacgtggagcaggtg 65 |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| Sbjct: 13191 tcggacgacgggtcgcag---gccggggagaagaagcggcggctgaacgtggagcaggtg 13247 Query: 66 cgcacgctggagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcag 125 || ||||||||||||||||||||| | | |||||||||||||||||||| ||||||||| Sbjct: 13248 cggacgctggagaagaacttcgagctcgggaacaagctggagccggagcggaagatgcag 13307 Query: 126 ctggcgcgcgcgctgggtctacagccccggcaggttgccatctggttccagaaccgccgc 185 || || |||||||| || || ||||| || ||||| |||||||||||||||||||||||| Sbjct: 13308 ctcgcccgcgcgctcgggctgcagccgcgtcaggtggccatctggttccagaaccgccgc 13367 Query: 186 gcccgctggaagacaaagcagctggagaaggactacgacgtgctcaagcgccagttcgac 245 || | |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 13368 gcgaggtggaagacgaagcagctggagaaggactacgacgcgctcaagcgccagctcgac 13427 Query: 246 gccgtcaaggccgagaacgacgccctcctctcccacaacaagaagctcca 295 ||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 13428 gccgtcaaggccgagaacgacgcgctcctcaaccacaacaagaagctcca 13477 Score = 186 bits (94), Expect = 4e-44 Identities = 112/118 (94%) Strand = Plus / Plus Query: 324 agggaggcggcgtcggagctgatcaacctcaacaaggagacggaggcgtcctgtagcaac 383 ||||||||||||||||||||||| ||||| |||||||||||||||||||| || |||||| Sbjct: 14347 agggaggcggcgtcggagctgataaacctgaacaaggagacggaggcgtcgtgcagcaac 14406 Query: 384 cgcagcgagaacagctccgagatcaacctcgacatctcgcgcacgccgccgtccgacg 441 ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 14407 cgcagcgagaatagctccgagatcaacctcgacatctcgcgcacgccgccgcccgacg 14464
>gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0091P11, complete sequence Length = 132151 Score = 349 bits (176), Expect = 5e-93 Identities = 262/290 (90%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 6 tcggacgacgggtcgcagctgggcggcgagaagaagcggcggctgaacgtggagcaggtg 65 |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| Sbjct: 46810 tcggacgacgggtcgcag---gccggggagaagaagcggcggctgaacgtggagcaggtg 46754 Query: 66 cgcacgctggagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcag 125 || ||||||||||||||||||||| | | |||||||||||||||||||| ||||||||| Sbjct: 46753 cggacgctggagaagaacttcgagctcgggaacaagctggagccggagcggaagatgcag 46694 Query: 126 ctggcgcgcgcgctgggtctacagccccggcaggttgccatctggttccagaaccgccgc 185 || || |||||||| || || ||||| || ||||| |||||||||||||||||||||||| Sbjct: 46693 ctcgcccgcgcgctcgggctgcagccgcgtcaggtggccatctggttccagaaccgccgc 46634 Query: 186 gcccgctggaagacaaagcagctggagaaggactacgacgtgctcaagcgccagttcgac 245 || | |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 46633 gcgaggtggaagacgaagcagctggagaaggactacgacgcgctcaagcgccagctcgac 46574 Query: 246 gccgtcaaggccgagaacgacgccctcctctcccacaacaagaagctcca 295 ||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 46573 gccgtcaaggccgagaacgacgcgctcctcaaccacaacaagaagctcca 46524 Score = 186 bits (94), Expect = 4e-44 Identities = 112/118 (94%) Strand = Plus / Minus Query: 324 agggaggcggcgtcggagctgatcaacctcaacaaggagacggaggcgtcctgtagcaac 383 ||||||||||||||||||||||| ||||| |||||||||||||||||||| || |||||| Sbjct: 45654 agggaggcggcgtcggagctgataaacctgaacaaggagacggaggcgtcgtgcagcaac 45595 Query: 384 cgcagcgagaacagctccgagatcaacctcgacatctcgcgcacgccgccgtccgacg 441 ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 45594 cgcagcgagaatagctccgagatcaacctcgacatctcgcgcacgccgccgcccgacg 45537
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 349 bits (176), Expect = 5e-93 Identities = 262/290 (90%), Gaps = 3/290 (1%) Strand = Plus / Minus Query: 6 tcggacgacgggtcgcagctgggcggcgagaagaagcggcggctgaacgtggagcaggtg 65 |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| Sbjct: 3768297 tcggacgacgggtcgcag---gccggggagaagaagcggcggctgaacgtggagcaggtg 3768241 Query: 66 cgcacgctggagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcag 125 || ||||||||||||||||||||| | | |||||||||||||||||||| ||||||||| Sbjct: 3768240 cggacgctggagaagaacttcgagctcgggaacaagctggagccggagcggaagatgcag 3768181 Query: 126 ctggcgcgcgcgctgggtctacagccccggcaggttgccatctggttccagaaccgccgc 185 || || |||||||| || || ||||| || ||||| |||||||||||||||||||||||| Sbjct: 3768180 ctcgcccgcgcgctcgggctgcagccgcgtcaggtggccatctggttccagaaccgccgc 3768121 Query: 186 gcccgctggaagacaaagcagctggagaaggactacgacgtgctcaagcgccagttcgac 245 || | |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 3768120 gcgaggtggaagacgaagcagctggagaaggactacgacgcgctcaagcgccagctcgac 3768061 Query: 246 gccgtcaaggccgagaacgacgccctcctctcccacaacaagaagctcca 295 ||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 3768060 gccgtcaaggccgagaacgacgcgctcctcaaccacaacaagaagctcca 3768011 Score = 186 bits (94), Expect = 4e-44 Identities = 112/118 (94%) Strand = Plus / Minus Query: 324 agggaggcggcgtcggagctgatcaacctcaacaaggagacggaggcgtcctgtagcaac 383 ||||||||||||||||||||||| ||||| |||||||||||||||||||| || |||||| Sbjct: 3767141 agggaggcggcgtcggagctgataaacctgaacaaggagacggaggcgtcgtgcagcaac 3767082 Query: 384 cgcagcgagaacagctccgagatcaacctcgacatctcgcgcacgccgccgtccgacg 441 ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3767081 cgcagcgagaatagctccgagatcaacctcgacatctcgcgcacgccgccgcccgacg 3767024 Score = 93.7 bits (47), Expect = 5e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 30 ggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgag 89 ||||||||||||||||||||| |||||||||||||| | |||||| || |||||| Sbjct: 4635414 ggcgagaagaagcggcggctggcgctggagcaggtgcgcgctctggagcggagcttcgac 4635473 Query: 90 gtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacag 149 || |||||||||||| ||||| |||||| | | ||||||| || || || ||| Sbjct: 4635474 acggacaacaagctggacccggaccgcaaggcccgcatcgcgcgcgacctcggcctgcag 4635533 Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 || || ||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 4635534 ccgcgccaggtcgccgtctggttccagaaccgccgcgcccggtggaagacgaagcagct 4635592 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 155 gcaggttgccatctggttccagaaccgccgcgcccgc 191 |||||| ||| |||||||||||||||||||||||||| Sbjct: 5149054 gcaggtcgccgtctggttccagaaccgccgcgcccgc 5149018
>ref|NM_196409.1| Oryza sativa (japonica cultivar-group) putative homeotic protein (OSJNBb0044I14.6), mRNA Length = 1056 Score = 198 bits (100), Expect = 1e-47 Identities = 214/252 (84%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 ||||||||| || || ||| ||||||||||||| | ||||||||| || ||||||| Sbjct: 307 gagaagaagaggaggttgagcgtggagcaggtgaggacgctggagcggagcttcgagtcc 366 Query: 93 gccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacagccc 152 | |||||||||||||||||||| ||| ||||||||||||||||||||| || ||||| Sbjct: 367 gggaacaagctggagccggagcggaaggcgcagctggcgcgcgcgctggggctgcagccg 426 Query: 153 cggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagctggag 212 |||||||| |||||||||||||||||||||||||| | |||||||| |||||||| ||| Sbjct: 427 cggcaggtggccatctggttccagaaccgccgcgcgaggtggaagacgaagcagctcgag 486 Query: 213 aaggactacgacgtgctcaagcgccagttcgacgccgtcaaggccgagaacgacgccctc 272 ||||||| ||||| ||| |||||| ||||||||| | |||||||||||||||||| Sbjct: 487 aaggacttcgacgccctccgccgccagctcgacgccgcccgcgccgagaacgacgccctc 546 Query: 273 ctctcccacaac 284 ||||||| |||| Sbjct: 547 ctctccctcaac 558 Score = 153 bits (77), Expect = 6e-34 Identities = 94/99 (94%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 326 ggaggcggcgtcggagctgatcaacctcaac---aaggagacggaggcgtcctgtagcaa 382 ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 636 ggaggcggcgtcggagctgatcaacctcaacgtcaaggagacggaggcgtcgtgcagcaa 695 Query: 383 ccgcagcgagaacagctccgagatcaacctcgacatctc 421 ||||||||||||||||||||||||||||||||||||||| Sbjct: 696 ccgcagcgagaacagctccgagatcaacctcgacatctc 734
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0044A10, from chromosome 10, complete sequence Length = 173374 Score = 198 bits (100), Expect = 1e-47 Identities = 214/252 (84%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 ||||||||| || || ||| ||||||||||||| | ||||||||| || ||||||| Sbjct: 136196 gagaagaagaggaggttgagcgtggagcaggtgaggacgctggagcggagcttcgagtcc 136255 Query: 93 gccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacagccc 152 | |||||||||||||||||||| ||| ||||||||||||||||||||| || ||||| Sbjct: 136256 gggaacaagctggagccggagcggaaggcgcagctggcgcgcgcgctggggctgcagccg 136315 Query: 153 cggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagctggag 212 |||||||| |||||||||||||||||||||||||| | |||||||| |||||||| ||| Sbjct: 136316 cggcaggtggccatctggttccagaaccgccgcgcgaggtggaagacgaagcagctcgag 136375 Query: 213 aaggactacgacgtgctcaagcgccagttcgacgccgtcaaggccgagaacgacgccctc 272 ||||||| ||||| ||| |||||| ||||||||| | |||||||||||||||||| Sbjct: 136376 aaggacttcgacgccctccgccgccagctcgacgccgcccgcgccgagaacgacgccctc 136435 Query: 273 ctctcccacaac 284 ||||||| |||| Sbjct: 136436 ctctccctcaac 136447 Score = 153 bits (77), Expect = 6e-34 Identities = 94/99 (94%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 326 ggaggcggcgtcggagctgatcaacctcaac---aaggagacggaggcgtcctgtagcaa 382 ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 136743 ggaggcggcgtcggagctgatcaacctcaacgtcaaggagacggaggcgtcgtgcagcaa 136802 Query: 383 ccgcagcgagaacagctccgagatcaacctcgacatctc 421 ||||||||||||||||||||||||||||||||||||||| Sbjct: 136803 ccgcagcgagaacagctccgagatcaacctcgacatctc 136841
>gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0044I14, from Chromosome 10, complete sequence Length = 63167 Score = 198 bits (100), Expect = 1e-47 Identities = 214/252 (84%) Strand = Plus / Minus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 ||||||||| || || ||| ||||||||||||| | ||||||||| || ||||||| Sbjct: 40346 gagaagaagaggaggttgagcgtggagcaggtgaggacgctggagcggagcttcgagtcc 40287 Query: 93 gccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacagccc 152 | |||||||||||||||||||| ||| ||||||||||||||||||||| || ||||| Sbjct: 40286 gggaacaagctggagccggagcggaaggcgcagctggcgcgcgcgctggggctgcagccg 40227 Query: 153 cggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagctggag 212 |||||||| |||||||||||||||||||||||||| | |||||||| |||||||| ||| Sbjct: 40226 cggcaggtggccatctggttccagaaccgccgcgcgaggtggaagacgaagcagctcgag 40167 Query: 213 aaggactacgacgtgctcaagcgccagttcgacgccgtcaaggccgagaacgacgccctc 272 ||||||| ||||| ||| |||||| ||||||||| | |||||||||||||||||| Sbjct: 40166 aaggacttcgacgccctccgccgccagctcgacgccgcccgcgccgagaacgacgccctc 40107 Query: 273 ctctcccacaac 284 ||||||| |||| Sbjct: 40106 ctctccctcaac 40095 Score = 153 bits (77), Expect = 6e-34 Identities = 94/99 (94%), Gaps = 3/99 (3%) Strand = Plus / Minus Query: 326 ggaggcggcgtcggagctgatcaacctcaac---aaggagacggaggcgtcctgtagcaa 382 ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 39799 ggaggcggcgtcggagctgatcaacctcaacgtcaaggagacggaggcgtcgtgcagcaa 39740 Query: 383 ccgcagcgagaacagctccgagatcaacctcgacatctc 421 ||||||||||||||||||||||||||||||||||||||| Sbjct: 39739 ccgcagcgagaacagctccgagatcaacctcgacatctc 39701
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 198 bits (100), Expect = 1e-47 Identities = 214/252 (84%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 ||||||||| || || ||| ||||||||||||| | ||||||||| || ||||||| Sbjct: 13289947 gagaagaagaggaggttgagcgtggagcaggtgaggacgctggagcggagcttcgagtcc 13290006 Query: 93 gccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacagccc 152 | |||||||||||||||||||| ||| ||||||||||||||||||||| || ||||| Sbjct: 13290007 gggaacaagctggagccggagcggaaggcgcagctggcgcgcgcgctggggctgcagccg 13290066 Query: 153 cggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagctggag 212 |||||||| |||||||||||||||||||||||||| | |||||||| |||||||| ||| Sbjct: 13290067 cggcaggtggccatctggttccagaaccgccgcgcgaggtggaagacgaagcagctcgag 13290126 Query: 213 aaggactacgacgtgctcaagcgccagttcgacgccgtcaaggccgagaacgacgccctc 272 ||||||| ||||| ||| |||||| ||||||||| | |||||||||||||||||| Sbjct: 13290127 aaggacttcgacgccctccgccgccagctcgacgccgcccgcgccgagaacgacgccctc 13290186 Query: 273 ctctcccacaac 284 ||||||| |||| Sbjct: 13290187 ctctccctcaac 13290198 Score = 153 bits (77), Expect = 6e-34 Identities = 94/99 (94%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 326 ggaggcggcgtcggagctgatcaacctcaac---aaggagacggaggcgtcctgtagcaa 382 ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 13290494 ggaggcggcgtcggagctgatcaacctcaacgtcaaggagacggaggcgtcgtgcagcaa 13290553 Query: 383 ccgcagcgagaacagctccgagatcaacctcgacatctc 421 ||||||||||||||||||||||||||||||||||||||| Sbjct: 13290554 ccgcagcgagaacagctccgagatcaacctcgacatctc 13290592 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 |||||||||||||||||| | |||||||||||| |||||||| || |||||||| | Sbjct: 11526490 gagaagaagcggcggctggcggcggagcaggtgcgggcgctggagcggagcttcgaggcg 11526549 Query: 93 gccaacaagctggagccggagcg 115 | |||||||||||| |||||||| Sbjct: 11526550 gacaacaagctggacccggagcg 11526572 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 156 caggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| ||| |||||||||||||||||||||| | |||||||| |||||| Sbjct: 11526613 caggtcgccgtctggttccagaaccgccgcgcgaggtggaagaccaagcag 11526663
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 198 bits (100), Expect = 1e-47 Identities = 214/252 (84%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 ||||||||| || || ||| ||||||||||||| | ||||||||| || ||||||| Sbjct: 13297287 gagaagaagaggaggttgagcgtggagcaggtgaggacgctggagcggagcttcgagtcc 13297346 Query: 93 gccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacagccc 152 | |||||||||||||||||||| ||| ||||||||||||||||||||| || ||||| Sbjct: 13297347 gggaacaagctggagccggagcggaaggcgcagctggcgcgcgcgctggggctgcagccg 13297406 Query: 153 cggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagctggag 212 |||||||| |||||||||||||||||||||||||| | |||||||| |||||||| ||| Sbjct: 13297407 cggcaggtggccatctggttccagaaccgccgcgcgaggtggaagacgaagcagctcgag 13297466 Query: 213 aaggactacgacgtgctcaagcgccagttcgacgccgtcaaggccgagaacgacgccctc 272 ||||||| ||||| ||| |||||| ||||||||| | |||||||||||||||||| Sbjct: 13297467 aaggacttcgacgccctccgccgccagctcgacgccgcccgcgccgagaacgacgccctc 13297526 Query: 273 ctctcccacaac 284 ||||||| |||| Sbjct: 13297527 ctctccctcaac 13297538 Score = 153 bits (77), Expect = 6e-34 Identities = 94/99 (94%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 326 ggaggcggcgtcggagctgatcaacctcaac---aaggagacggaggcgtcctgtagcaa 382 ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 13297834 ggaggcggcgtcggagctgatcaacctcaacgtcaaggagacggaggcgtcgtgcagcaa 13297893 Query: 383 ccgcagcgagaacagctccgagatcaacctcgacatctc 421 ||||||||||||||||||||||||||||||||||||||| Sbjct: 13297894 ccgcagcgagaacagctccgagatcaacctcgacatctc 13297932 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 |||||||||||||||||| | |||||||||||| |||||||| || |||||||| | Sbjct: 11532930 gagaagaagcggcggctggcggcggagcaggtgcgggcgctggagcggagcttcgaggcg 11532989 Query: 93 gccaacaagctggagccggagcg 115 | |||||||||||| |||||||| Sbjct: 11532990 gacaacaagctggacccggagcg 11533012 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 156 caggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| ||| |||||||||||||||||||||| | |||||||| |||||| Sbjct: 11533053 caggtcgccgtctggttccagaaccgccgcgcgaggtggaagaccaagcag 11533103
>gb|AY554028.1| Oryza sativa (japonica cultivar-group) clone S14171 Hox21 (hox21) mRNA, partial cds Length = 844 Score = 186 bits (94), Expect = 4e-44 Identities = 112/118 (94%) Strand = Plus / Plus Query: 324 agggaggcggcgtcggagctgatcaacctcaacaaggagacggaggcgtcctgtagcaac 383 ||||||||||||||||||||||| ||||| |||||||||||||||||||| || |||||| Sbjct: 5 agggaggcggcgtcggagctgataaacctgaacaaggagacggaggcgtcgtgcagcaac 64 Query: 384 cgcagcgagaacagctccgagatcaacctcgacatctcgcgcacgccgccgtccgacg 441 ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 65 cgcagcgagaatagctccgagatcaacctcgacatctcgcgcacgccgccgcccgacg 122
>gb|BT018458.1| Zea mays clone EL01N0412H10.d mRNA sequence Length = 1209 Score = 161 bits (81), Expect = 2e-36 Identities = 158/184 (85%) Strand = Plus / Plus Query: 27 ggcggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttc 86 ||||| |||||||||||||| |||| | |||||||||||| |||||||| || |||| Sbjct: 424 ggcggggagaagaagcggcgcctgagctccgagcaggtgcgcgcgctggagcggagcttc 483 Query: 87 gaggtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtcta 146 ||||||| |||||||||||||||||||||||| || ||||||||||| || | || Sbjct: 484 gaggtggagaacaagctggagccggagcgcaaggcgcggctggcgcgcgacctcngcctg 543 Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| ||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 544 cagccgcgccaggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcag 603 Query: 207 ctgg 210 |||| Sbjct: 604 ctgg 607
>gb|DQ353855.1| Triticum aestivum homeodomain-leucine zipper transcription factor TaHDZipI-1 mRNA, complete cds Length = 963 Score = 159 bits (80), Expect = 9e-36 Identities = 152/176 (86%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 ||||||||||||||||||| || ||||||||||||| | |||||| || |||||||||| Sbjct: 157 gagaagaagcggcggctgagcgcggagcaggtgcgcgccctggagcggagcttcgaggtg 216 Query: 93 gccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacagccc 152 | |||||||||||||||||||||||| || ||||||||||| || || || ||||| Sbjct: 217 gagaacaagctggagccggagcgcaaggcgcggctggcgcgcgaccttggcctgcagccg 276 Query: 153 cggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 || ||||| ||| ||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 277 cgccaggtcgccgtctggttccagaaccgccgggcgcgctggaagaccaagcagct 332
>ref|XM_482997.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1412 Score = 155 bits (78), Expect = 1e-34 Identities = 156/182 (85%) Strand = Plus / Plus Query: 27 ggcggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttc 86 ||||| ||||||||||||||||||| |||||||||||||||| |||||||| || |||| Sbjct: 615 ggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgctggagcggagcttc 674 Query: 87 gaggtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtcta 146 ||| || |||||||||||||||||||| ||| || ||||||||||| || || || Sbjct: 675 gagacggagaacaagctggagccggagcggaaggcgcggctggcgcgcgacctcgggctg 734 Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| ||| |||||||||||||||||||||| || |||||||| |||||| Sbjct: 735 cagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtggaagaccaagcag 794 Query: 207 ct 208 || Sbjct: 795 ct 796
>ref|XM_507271.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0092C08.26 mRNA Length = 1916 Score = 155 bits (78), Expect = 1e-34 Identities = 156/182 (85%) Strand = Plus / Plus Query: 27 ggcggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttc 86 ||||| ||||||||||||||||||| |||||||||||||||| |||||||| || |||| Sbjct: 612 ggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgctggagcggagcttc 671 Query: 87 gaggtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtcta 146 ||| || |||||||||||||||||||| ||| || ||||||||||| || || || Sbjct: 672 gagacggagaacaagctggagccggagcggaaggcgcggctggcgcgcgacctcgggctg 731 Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| ||| |||||||||||||||||||||| || |||||||| |||||| Sbjct: 732 cagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtggaagaccaagcag 791 Query: 207 ct 208 || Sbjct: 792 ct 793
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 155 bits (78), Expect = 1e-34 Identities = 156/182 (85%) Strand = Plus / Minus Query: 27 ggcggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttc 86 ||||| ||||||||||||||||||| |||||||||||||||| |||||||| || |||| Sbjct: 23797518 ggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgctggagcggagcttc 23797459 Query: 87 gaggtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtcta 146 ||| || |||||||||||||||||||| ||| || ||||||||||| || || || Sbjct: 23797458 gagacggagaacaagctggagccggagcggaaggcgcggctggcgcgcgacctcgggctg 23797399 Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| ||| |||||||||||||||||||||| || |||||||| |||||| Sbjct: 23797398 cagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtggaagaccaagcag 23797339 Query: 207 ct 208 || Sbjct: 23797338 ct 23797337 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 ||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19880185 ccccggcaggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagct 19880127 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 ||||||||||||||||||| | ||||||||||| | ||||||| || |||||||| | Sbjct: 19880302 gagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagcttcgaggag 19880243 Query: 93 gccaacaagctggagccggagcgcaaga 120 | |||||||||||||||||||| |||| Sbjct: 19880242 gagaacaagctggagccggagcggaaga 19880215 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 167 ctggttccagaaccgccgcgcccgct 192 ||||||||||||||||||| |||||| Sbjct: 8633969 ctggttccagaaccgccgctcccgct 8633944
>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0092C08 Length = 131049 Score = 155 bits (78), Expect = 1e-34 Identities = 156/182 (85%) Strand = Plus / Minus Query: 27 ggcggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttc 86 ||||| ||||||||||||||||||| |||||||||||||||| |||||||| || |||| Sbjct: 86718 ggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgctggagcggagcttc 86659 Query: 87 gaggtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtcta 146 ||| || |||||||||||||||||||| ||| || ||||||||||| || || || Sbjct: 86658 gagacggagaacaagctggagccggagcggaaggcgcggctggcgcgcgacctcgggctg 86599 Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| ||| |||||||||||||||||||||| || |||||||| |||||| Sbjct: 86598 cagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtggaagaccaagcag 86539 Query: 207 ct 208 || Sbjct: 86538 ct 86537
>dbj|AK106818.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-D05, full insert sequence Length = 1927 Score = 155 bits (78), Expect = 1e-34 Identities = 156/182 (85%) Strand = Plus / Plus Query: 27 ggcggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttc 86 ||||| ||||||||||||||||||| |||||||||||||||| |||||||| || |||| Sbjct: 612 ggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgctggagcggagcttc 671 Query: 87 gaggtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtcta 146 ||| || |||||||||||||||||||| ||| || ||||||||||| || || || Sbjct: 672 gagacggagaacaagctggagccggagcggaaggcgcggctggcgcgcgacctcgggctg 731 Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| ||| |||||||||||||||||||||| || |||||||| |||||| Sbjct: 732 cagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtggaagaccaagcag 791 Query: 207 ct 208 || Sbjct: 792 ct 793
>dbj|AK068244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013140I04, full insert sequence Length = 1412 Score = 155 bits (78), Expect = 1e-34 Identities = 156/182 (85%) Strand = Plus / Plus Query: 27 ggcggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttc 86 ||||| ||||||||||||||||||| |||||||||||||||| |||||||| || |||| Sbjct: 615 ggcggggagaagaagcggcggctgagcgtggagcaggtgcgcgcgctggagcggagcttc 674 Query: 87 gaggtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtcta 146 ||| || |||||||||||||||||||| ||| || ||||||||||| || || || Sbjct: 675 gagacggagaacaagctggagccggagcggaaggcgcggctggcgcgcgacctcgggctg 734 Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| ||| |||||||||||||||||||||| || |||||||| |||||| Sbjct: 735 cagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtggaagaccaagcag 794 Query: 207 ct 208 || Sbjct: 795 ct 796
>ref|XM_506668.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1595_D08.21 mRNA Length = 1473 Score = 147 bits (74), Expect = 4e-32 Identities = 155/182 (85%) Strand = Plus / Plus Query: 27 ggcggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttc 86 ||||| ||||||||||||||||||| |||||||||||| ||| |||||||| || |||| Sbjct: 470 ggcggggagaagaagcggcggctgagcgtggagcaggttcgcgcgctggagcggagcttc 529 Query: 87 gaggtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtcta 146 ||||||| |||||||| ||||| ||||| ||| || ||||||||||| || || || Sbjct: 530 gaggtggagaacaagcttgagcctgagcggaaggcgcggctggcgcgcgacctcggcctg 589 Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| ||| |||||||||||||||||||||| || |||||||| |||||| Sbjct: 590 cagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtggaagaccaagcag 649 Query: 207 ct 208 || Sbjct: 650 ct 651
>ref|XM_450967.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1463 Score = 147 bits (74), Expect = 4e-32 Identities = 155/182 (85%) Strand = Plus / Plus Query: 27 ggcggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttc 86 ||||| ||||||||||||||||||| |||||||||||| ||| |||||||| || |||| Sbjct: 474 ggcggggagaagaagcggcggctgagcgtggagcaggttcgcgcgctggagcggagcttc 533 Query: 87 gaggtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtcta 146 ||||||| |||||||| ||||| ||||| ||| || ||||||||||| || || || Sbjct: 534 gaggtggagaacaagcttgagcctgagcggaaggcgcggctggcgcgcgacctcggcctg 593 Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| ||| |||||||||||||||||||||| || |||||||| |||||| Sbjct: 594 cagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtggaagaccaagcag 653 Query: 207 ct 208 || Sbjct: 654 ct 655
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 147 bits (74), Expect = 4e-32 Identities = 155/182 (85%) Strand = Plus / Plus Query: 27 ggcggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttc 86 ||||| ||||||||||||||||||| |||||||||||| ||| |||||||| || |||| Sbjct: 17849103 ggcggggagaagaagcggcggctgagcgtggagcaggttcgcgcgctggagcggagcttc 17849162 Query: 87 gaggtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtcta 146 ||||||| |||||||| ||||| ||||| ||| || ||||||||||| || || || Sbjct: 17849163 gaggtggagaacaagcttgagcctgagcggaaggcgcggctggcgcgcgacctcggcctg 17849222 Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| ||| |||||||||||||||||||||| || |||||||| |||||| Sbjct: 17849223 cagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtggaagaccaagcag 17849282 Query: 207 ct 208 || Sbjct: 17849283 ct 17849284 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 153 cggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 |||||||| ||| | |||||||||||||||||||| | |||||||| |||||||| Sbjct: 12728966 cggcaggtggccgtgtggttccagaaccgccgcgcgaggtggaagacgaagcagct 12728911 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| |||||||||||||||||| ||||| || |||||| | |||||| Sbjct: 20370870 cagcctcgccaggtcgccatctggttccagaacaagcgcgcgcggtggaagtccaagcag 20370929 Query: 207 ct 208 || Sbjct: 20370930 ct 20370931 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 16620708 tggttccagaaccgccgcgcc 16620688
>dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1595_D08 Length = 116351 Score = 147 bits (74), Expect = 4e-32 Identities = 155/182 (85%) Strand = Plus / Plus Query: 27 ggcggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttc 86 ||||| ||||||||||||||||||| |||||||||||| ||| |||||||| || |||| Sbjct: 89747 ggcggggagaagaagcggcggctgagcgtggagcaggttcgcgcgctggagcggagcttc 89806 Query: 87 gaggtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtcta 146 ||||||| |||||||| ||||| ||||| ||| || ||||||||||| || || || Sbjct: 89807 gaggtggagaacaagcttgagcctgagcggaaggcgcggctggcgcgcgacctcggcctg 89866 Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| ||| |||||||||||||||||||||| || |||||||| |||||| Sbjct: 89867 cagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtggaagaccaagcag 89926 Query: 207 ct 208 || Sbjct: 89927 ct 89928
>gb|AF145728.1|AF145728 Oryza sativa homeodomain leucine zipper protein (Oshox4) mRNA, complete cds Length = 1423 Score = 147 bits (74), Expect = 4e-32 Identities = 155/182 (85%) Strand = Plus / Plus Query: 27 ggcggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttc 86 ||||| ||||||||||||||||||| |||||||||||| ||| |||||||| || |||| Sbjct: 440 ggcggggagaagaagcggcggctgagcgtggagcaggttcgcgcgctggagcggagcttc 499 Query: 87 gaggtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtcta 146 ||||||| |||||||| ||||| ||||| ||| || ||||||||||| || || || Sbjct: 500 gaggtggagaacaagcttgagcctgagcggaaggcgcggctggcgcgcgacctcggcctg 559 Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| ||| |||||||||||||||||||||| || |||||||| |||||| Sbjct: 560 cagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtggaagaccaagcag 619 Query: 207 ct 208 || Sbjct: 620 ct 621
>dbj|AK099710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013077J22, full insert sequence Length = 1463 Score = 147 bits (74), Expect = 4e-32 Identities = 155/182 (85%) Strand = Plus / Plus Query: 27 ggcggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttc 86 ||||| ||||||||||||||||||| |||||||||||| ||| |||||||| || |||| Sbjct: 474 ggcggggagaagaagcggcggctgagcgtggagcaggttcgcgcgctggagcggagcttc 533 Query: 87 gaggtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtcta 146 ||||||| |||||||| ||||| ||||| ||| || ||||||||||| || || || Sbjct: 534 gaggtggagaacaagcttgagcctgagcggaaggcgcggctggcgcgcgacctcggcctg 593 Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| ||| |||||||||||||||||||||| || |||||||| |||||| Sbjct: 594 cagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtggaagaccaagcag 653 Query: 207 ct 208 || Sbjct: 654 ct 655
>dbj|AK105484.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-B05, full insert sequence Length = 1473 Score = 147 bits (74), Expect = 4e-32 Identities = 155/182 (85%) Strand = Plus / Plus Query: 27 ggcggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttc 86 ||||| ||||||||||||||||||| |||||||||||| ||| |||||||| || |||| Sbjct: 470 ggcggggagaagaagcggcggctgagcgtggagcaggttcgcgcgctggagcggagcttc 529 Query: 87 gaggtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtcta 146 ||||||| |||||||| ||||| ||||| ||| || ||||||||||| || || || Sbjct: 530 gaggtggagaacaagcttgagcctgagcggaaggcgcggctggcgcgcgacctcggcctg 589 Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| ||| |||||||||||||||||||||| || |||||||| |||||| Sbjct: 590 cagccgcgccaggtcgccgtctggttccagaaccgccgcgcgcggtggaagaccaagcag 649 Query: 207 ct 208 || Sbjct: 650 ct 651
>gb|AY105265.1| Zea mays PCO062717 mRNA sequence Length = 2229 Score = 139 bits (70), Expect = 9e-30 Identities = 121/138 (87%) Strand = Plus / Plus Query: 71 gctggagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcagctggc 130 |||||||| || |||||||| || ||||||||||||||||||||||||| | ||||||| Sbjct: 973 gctggagaggagcttcgaggaggagaacaagctggagccggagcgcaagacggagctggc 1032 Query: 131 gcgcgcgctgggtctacagccccggcaggttgccatctggttccagaaccgccgcgcccg 190 |||| |||||| || ||||| || ||||| ||| ||||||||||||||||||||||||| Sbjct: 1033 gcgcaagctgggcctgcagcctcgccaggtggccgtctggttccagaaccgccgcgcccg 1092 Query: 191 ctggaagacaaagcagct 208 |||||||| |||||||| Sbjct: 1093 gtggaagaccaagcagct 1110
>ref|XM_467603.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1363 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 71 gctggagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcagctggc 130 |||||||| || |||||||| || |||||||||||||||||||| |||| | ||||||| Sbjct: 309 gctggagaggagcttcgaggaggagaacaagctggagccggagcggaagacggagctggc 368 Query: 131 gcgcgcgctgggtctacagccccggcaggttgccatctggttccagaaccgccgcgcccg 190 ||| ||| || || ||||| |||||||| ||| | |||||||||||||||||||| || Sbjct: 369 gcggaagctagggctgcagccgcggcaggtcgccgtgtggttccagaaccgccgcgcgcg 428 Query: 191 ctggaagacaaagcagct 208 ||||||||| |||||||| Sbjct: 429 ctggaagaccaagcagct 446
>ref|XM_506952.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0072H09.24 mRNA Length = 1710 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 71 gctggagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcagctggc 130 |||||||| || |||||||| || |||||||||||||||||||| |||| | ||||||| Sbjct: 806 gctggagaggagcttcgaggaggagaacaagctggagccggagcggaagacggagctggc 865 Query: 131 gcgcgcgctgggtctacagccccggcaggttgccatctggttccagaaccgccgcgcccg 190 ||| ||| || || ||||| |||||||| ||| | |||||||||||||||||||| || Sbjct: 866 gcggaagctagggctgcagccgcggcaggtcgccgtgtggttccagaaccgccgcgcgcg 925 Query: 191 ctggaagacaaagcagct 208 ||||||||| |||||||| Sbjct: 926 ctggaagaccaagcagct 943
>gb|AY554029.1| Oryza sativa (japonica cultivar-group) clone R4057 Hox16 (hox16) mRNA, complete cds Length = 1199 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 71 gctggagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcagctggc 130 |||||||| || |||||||| || |||||||||||||||||||| |||| | ||||||| Sbjct: 160 gctggagaggagcttcgaggaggagaacaagctggagccggagcggaagacggagctggc 219 Query: 131 gcgcgcgctgggtctacagccccggcaggttgccatctggttccagaaccgccgcgcccg 190 ||| ||| || || ||||| |||||||| ||| | |||||||||||||||||||| || Sbjct: 220 gcggaagctagggctgcagccgcggcaggtcgccgtgtggttccagaaccgccgcgcgcg 279 Query: 191 ctggaagacaaagcagct 208 ||||||||| |||||||| Sbjct: 280 ctggaagaccaagcagct 297
>gb|AY559045.1| Oryza sativa homeodomain leucine zipper protein 16 (hox16) mRNA, complete cds Length = 1472 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 71 gctggagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcagctggc 130 |||||||| || |||||||| || |||||||||||||||||||| |||| | ||||||| Sbjct: 395 gctggagaggagcttcgaggaggagaacaagctggagccggagcggaagacggagctggc 454 Query: 131 gcgcgcgctgggtctacagccccggcaggttgccatctggttccagaaccgccgcgcccg 190 ||| ||| || || ||||| |||||||| ||| | |||||||||||||||||||| || Sbjct: 455 gcggaagctagggctgcagccgcggcaggtcgccgtgtggttccagaaccgccgcgcgcg 514 Query: 191 ctggaagacaaagcagct 208 ||||||||| |||||||| Sbjct: 515 ctggaagaccaagcagct 532
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 71 gctggagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcagctggc 130 |||||||| || |||||||| || |||||||||||||||||||| |||| | ||||||| Sbjct: 30400813 gctggagaggagcttcgaggaggagaacaagctggagccggagcggaagacggagctggc 30400872 Query: 131 gcgcgcgctgggtctacagccccggcaggttgccatctggttccagaaccgccgcgcccg 190 ||| ||| || || ||||| |||||||| ||| | |||||||||||||||||||| || Sbjct: 30400873 gcggaagctagggctgcagccgcggcaggtcgccgtgtggttccagaaccgccgcgcgcg 30400932 Query: 191 ctggaagacaaagcagct 208 ||||||||| |||||||| Sbjct: 30400933 ctggaagaccaagcagct 30400950 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 124 agctggcgcgcgcgctgggtctacagccccggcaggttgccatctggttccagaac 179 |||||||||| | ||| || || ||||| || ||||| |||||||||||||||||| Sbjct: 26162184 agctggcgcgggagctcgggctgcagccgcgccaggtggccatctggttccagaac 26162239
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 71 gctggagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcagctggc 130 |||||||| || |||||||| || |||||||||||||||||||| |||| | ||||||| Sbjct: 81673 gctggagaggagcttcgaggaggagaacaagctggagccggagcggaagacggagctggc 81732 Query: 131 gcgcgcgctgggtctacagccccggcaggttgccatctggttccagaaccgccgcgcccg 190 ||| ||| || || ||||| |||||||| ||| | |||||||||||||||||||| || Sbjct: 81733 gcggaagctagggctgcagccgcggcaggtcgccgtgtggttccagaaccgccgcgcgcg 81792 Query: 191 ctggaagacaaagcagct 208 ||||||||| |||||||| Sbjct: 81793 ctggaagaccaagcagct 81810
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0617A09 Length = 134804 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 71 gctggagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcagctggc 130 |||||||| || |||||||| || |||||||||||||||||||| |||| | ||||||| Sbjct: 6861 gctggagaggagcttcgaggaggagaacaagctggagccggagcggaagacggagctggc 6920 Query: 131 gcgcgcgctgggtctacagccccggcaggttgccatctggttccagaaccgccgcgcccg 190 ||| ||| || || ||||| |||||||| ||| | |||||||||||||||||||| || Sbjct: 6921 gcggaagctagggctgcagccgcggcaggtcgccgtgtggttccagaaccgccgcgcgcg 6980 Query: 191 ctggaagacaaagcagct 208 ||||||||| |||||||| Sbjct: 6981 ctggaagaccaagcagct 6998
>dbj|AK119592.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D05, full insert sequence Length = 1710 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 71 gctggagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcagctggc 130 |||||||| || |||||||| || |||||||||||||||||||| |||| | ||||||| Sbjct: 806 gctggagaggagcttcgaggaggagaacaagctggagccggagcggaagacggagctggc 865 Query: 131 gcgcgcgctgggtctacagccccggcaggttgccatctggttccagaaccgccgcgcccg 190 ||| ||| || || ||||| |||||||| ||| | |||||||||||||||||||| || Sbjct: 866 gcggaagctagggctgcagccgcggcaggtcgccgtgtggttccagaaccgccgcgcgcg 925 Query: 191 ctggaagacaaagcagct 208 ||||||||| |||||||| Sbjct: 926 ctggaagaccaagcagct 943
>dbj|AK058364.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-F09, full insert sequence Length = 1363 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 71 gctggagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcagctggc 130 |||||||| || |||||||| || |||||||||||||||||||| |||| | ||||||| Sbjct: 309 gctggagaggagcttcgaggaggagaacaagctggagccggagcggaagacggagctggc 368 Query: 131 gcgcgcgctgggtctacagccccggcaggttgccatctggttccagaaccgccgcgcccg 190 ||| ||| || || ||||| |||||||| ||| | |||||||||||||||||||| || Sbjct: 369 gcggaagctagggctgcagccgcggcaggtcgccgtgtggttccagaaccgccgcgcgcg 428 Query: 191 ctggaagacaaagcagct 208 ||||||||| |||||||| Sbjct: 429 ctggaagaccaagcagct 446
>gb|AF264731.1|AF264731 Oryza sativa microsatellite 25CAC sequence Length = 1201 Score = 97.6 bits (49), Expect = 3e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 96 aacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacagccccgg 155 |||||||||||||||||||| |||| | |||||||||| ||| | || ||||| ||| Sbjct: 220 aacaagctggagccggagcggaagacggagctggcgcggaagctatggctgcagccgcgg 279 Query: 156 caggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 ||||| ||| | |||||||||||||||||||| ||||||||||| |||||||| Sbjct: 280 caggtcgccgtgtggttccagaaccgccgcgcgcgctggaagaccaagcagct 332
>gb|AY023260.1| Oryza sativa microsatellite MRG5585 containing (GGC)X8, closest to marker pTA248, genomic sequence Length = 224 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 386 cagcgagaacagctccgagatcaacctcgacatctcgcgcacgccgccgtccgacg 441 ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1 cagcgagaatagctccgagatcaacctcgacatctcgcgcacgccgccgcccgacg 56
>ref|XM_482406.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1837 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 ||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 864 ccccggcaggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagct 922 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 ||||||||||||||||||| | ||||||||||| | ||||||| || |||||||| | Sbjct: 747 gagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagcttcgaggag 806 Query: 93 gccaacaagctggagccggagcgcaaga 120 | |||||||||||||||||||| |||| Sbjct: 807 gagaacaagctggagccggagcggaaga 834
>ref|XM_507232.1| PREDICTED Oryza sativa (japonica cultivar-group), P0433E10.14 mRNA Length = 1855 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 ||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 863 ccccggcaggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagct 921 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 ||||||||||||||||||| | ||||||||||| | ||||||| || |||||||| | Sbjct: 746 gagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagcttcgaggag 805 Query: 93 gccaacaagctggagccggagcgcaaga 120 | |||||||||||||||||||| |||| Sbjct: 806 gagaacaagctggagccggagcggaaga 833
>ref|NM_187673.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 924 Score = 93.7 bits (47), Expect = 5e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 30 ggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgag 89 ||||||||||||||||||||| |||||||||||||| | |||||| || |||||| Sbjct: 118 ggcgagaagaagcggcggctggcgctggagcaggtgcgcgctctggagcggagcttcgac 177 Query: 90 gtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacag 149 || |||||||||||| ||||| |||||| | | ||||||| || || || ||| Sbjct: 178 acggacaacaagctggacccggaccgcaaggcccgcatcgcgcgcgacctcggcctgcag 237 Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 || || ||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 238 ccgcgccaggtcgccgtctggttccagaaccgccgcgcccggtggaagacgaagcagct 296
>gb|AY554032.1| Oryza sativa (japonica cultivar-group) clone R10191 Hox13 (hox13) mRNA, partial cds Length = 419 Score = 93.7 bits (47), Expect = 5e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 30 ggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgag 89 ||||||||||||||||||||| |||||||||||||| | |||||| || |||||| Sbjct: 46 ggcgagaagaagcggcggctggcgctggagcaggtgcgcgctctggagcggagcttcgac 105 Query: 90 gtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacag 149 || |||||||||||| ||||| |||||| | | ||||||| || || || ||| Sbjct: 106 acggacaacaagctggacccggaccgcaaggcccgcatcgcgcgcgacctcggcctgcag 165 Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 || || ||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 166 ccgcgccaggtcgccgtctggttccagaaccgccgcgcccggtggaagacgaagcagct 224
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0433E10 Length = 144643 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 ||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 48363 ccccggcaggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagct 48305 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 ||||||||||||||||||| | ||||||||||| | ||||||| || |||||||| | Sbjct: 48480 gagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagcttcgaggag 48421 Query: 93 gccaacaagctggagccggagcgcaaga 120 | |||||||||||||||||||| |||| Sbjct: 48420 gagaacaagctggagccggagcggaaga 48393
>gb|AF145729.1|AF145729 Oryza sativa homeodomain leucine zipper protein (Oshox5) mRNA, complete cds Length = 1538 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 ||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 580 ccccggcaggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagct 638 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 ||||||||||||||||||| | ||||||||||| | ||||||| || |||||||| | Sbjct: 463 gagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagcttcgaggag 522 Query: 93 gccaacaagctggagccggagcgcaaga 120 | |||||||||||||||||||| |||| Sbjct: 523 gagaacaagctggagccggagcggaaga 550
>dbj|AK110561.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-C12, full insert sequence Length = 1269 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 ||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 473 ccccggcaggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagct 531 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 ||||||||||||||||||| | ||||||||||| | ||||||| || |||||||| | Sbjct: 356 gagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagcttcgaggag 415 Query: 93 gccaacaagctggagccggagcgcaaga 120 | |||||||||||||||||||| |||| Sbjct: 416 gagaacaagctggagccggagcggaaga 443
>dbj|AK105644.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F05, full insert sequence Length = 1573 Score = 93.7 bits (47), Expect = 5e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 30 ggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgag 89 ||||||||||||||||||||| |||||||||||||| | |||||| || |||||| Sbjct: 497 ggcgagaagaagcggcggctggcgctggagcaggtgcgcgctctggagcggagcttcgac 556 Query: 90 gtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacag 149 || |||||||||||| ||||| |||||| | | ||||||| || || || ||| Sbjct: 557 acggacaacaagctggacccggaccgcaaggcccgcatcgcgcgcgacctcggcctgcag 616 Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 || || ||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 617 ccgcgccaggtcgccgtctggttccagaaccgccgcgcccggtggaagacgaagcagct 675
>dbj|AK101601.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051J21, full insert sequence Length = 1534 Score = 93.7 bits (47), Expect = 5e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 30 ggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgag 89 ||||||||||||||||||||| |||||||||||||| | |||||| || |||||| Sbjct: 498 ggcgagaagaagcggcggctggcgctggagcaggtgcgcgctctggagcggagcttcgac 557 Query: 90 gtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacag 149 || |||||||||||| ||||| |||||| | | ||||||| || || || ||| Sbjct: 558 acggacaacaagctggacccggaccgcaaggcccgcatcgcgcgcgacctcggcctgcag 617 Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 || || ||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 618 ccgcgccaggtcgccgtctggttccagaaccgccgcgcccggtggaagacgaagcagct 676
>dbj|AK101569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050G15, full insert sequence Length = 1836 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 ||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 863 ccccggcaggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagct 921 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 ||||||||||||||||||| | ||||||||||| | ||||||| || |||||||| | Sbjct: 746 gagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagcttcgaggag 805 Query: 93 gccaacaagctggagccggagcgcaaga 120 | |||||||||||||||||||| |||| Sbjct: 806 gagaacaagctggagccggagcggaaga 833
>dbj|AK101522.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046N04, full insert sequence Length = 1577 Score = 93.7 bits (47), Expect = 5e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 30 ggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgag 89 ||||||||||||||||||||| |||||||||||||| | |||||| || |||||| Sbjct: 494 ggcgagaagaagcggcggctggcgctggagcaggtgcgcgctctggagcggagcttcgac 553 Query: 90 gtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacag 149 || |||||||||||| ||||| |||||| | | ||||||| || || || ||| Sbjct: 554 acggacaacaagctggacccggaccgcaaggcccgcatcgcgcgcgacctcggcctgcag 613 Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 || || ||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 614 ccgcgccaggtcgccgtctggttccagaaccgccgcgcccggtggaagacgaagcagct 672
>dbj|AK100634.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110A12, full insert sequence Length = 1854 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 ||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 862 ccccggcaggtcgccgtctggttccagaaccgccgcgcccgctggaagaccaagcagct 920 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 ||||||||||||||||||| | ||||||||||| | ||||||| || |||||||| | Sbjct: 745 gagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagcttcgaggag 804 Query: 93 gccaacaagctggagccggagcgcaaga 120 | |||||||||||||||||||| |||| Sbjct: 805 gagaacaagctggagccggagcggaaga 832
>dbj|AK060119.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F01, full insert sequence Length = 1214 Score = 93.7 bits (47), Expect = 5e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 30 ggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgag 89 ||||||||||||||||||||| |||||||||||||| | |||||| || |||||| Sbjct: 176 ggcgagaagaagcggcggctggcgctggagcaggtgcgcgctctggagcggagcttcgac 235 Query: 90 gtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacag 149 || |||||||||||| ||||| |||||| | | ||||||| || || || ||| Sbjct: 236 acggacaacaagctggacccggaccgcaaggcccgcatcgcgcgcgacctcggcctgcag 295 Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 || || ||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 296 ccgcgccaggtcgccgtctggttccagaaccgccgcgcccggtggaagacgaagcagct 354
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 93.7 bits (47), Expect = 5e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 30 ggcgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgag 89 ||||||||||||||||||||| |||||||||||||| | |||||| || |||||| Sbjct: 76254 ggcgagaagaagcggcggctggcgctggagcaggtgcgcgctctggagcggagcttcgac 76313 Query: 90 gtggccaacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacag 149 || |||||||||||| ||||| |||||| | | ||||||| || || || ||| Sbjct: 76314 acggacaacaagctggacccggaccgcaaggcccgcatcgcgcgcgacctcggcctgcag 76373 Query: 150 ccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 || || ||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 76374 ccgcgccaggtcgccgtctggttccagaaccgccgcgcccggtggaagacgaagcagct 76432
>ref|XM_473365.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 690 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 124 agctggcgcgcgcgctgggtctacagccccggcaggttgccatctggttccagaac 179 |||||||||||| |||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 167 agctggcgcgcgagctgggcctgcagccgcggcaggtggccatctggttccagaac 222
>emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08, complete sequence Length = 140449 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 124 agctggcgcgcgcgctgggtctacagccccggcaggttgccatctggttccagaac 179 |||||||||||| |||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 40550 agctggcgcgcgagctgggcctgcagccgcggcaggtggccatctggttccagaac 40605
>gb|AY224440.1| Oryza sativa (japonica cultivar-group) isolate 22834 homeodomain leucine zipper protein-like protein mRNA, partial cds Length = 837 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 124 agctggcgcgcgcgctgggtctacagccccggcaggttgccatctggttccagaac 179 |||||||||||| |||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 314 agctggcgcgcgagctgggcctgcagccgcggcaggtggccatctggttccagaac 369
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 124 agctggcgcgcgcgctgggtctacagccccggcaggttgccatctggttccagaac 179 |||||||||||| |||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 27097907 agctggcgcgcgagctgggcctgcagccgcggcaggtggccatctggttccagaac 27097962 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 ctgcagggaggcggcgtcgg 339 |||||||||||||||||||| Sbjct: 30905031 ctgcagggaggcggcgtcgg 30905012
>dbj|AP005555.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1118_B06 Length = 106678 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 125 gctggcgcgcgcgctgggtctacagccccggcaggttgccatctggttccagaaccgccg 184 ||||||||||| || || || ||||| || ||||| ||| ||||||||||||||||||| Sbjct: 20 gctggcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttccagaaccgccg 79 Query: 185 cgcccgctggaagacaaagcagct 208 ||| || |||||||| |||||||| Sbjct: 80 cgcgcggtggaagaccaagcagct 103
>dbj|AK109177.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-H12, full insert sequence Length = 908 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 124 agctggcgcgcgcgctgggtctacagccccggcaggttgccatctggttccagaac 179 |||||||||||| |||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 77 agctggcgcgcgagctgggcctgcagccgcggcaggtggccatctggttccagaac 132
>ref|NM_196163.1| Oryza sativa (japonica cultivar-group) putative homeodomain leucine zipper protein (OSJNBa0095C06.14), mRNA Length = 888 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 |||||||||||||||||| | |||||||||||| |||||||| || |||||||| | Sbjct: 160 gagaagaagcggcggctggcggcggagcaggtgcgggcgctggagcggagcttcgaggcg 219 Query: 93 gccaacaagctggagccggagcg 115 | |||||||||||| |||||||| Sbjct: 220 gacaacaagctggacccggagcg 242 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 156 caggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| ||| |||||||||||||||||||||| | |||||||| |||||| Sbjct: 283 caggtcgccgtctggttccagaaccgccgcgcgaggtggaagaccaagcag 333
>gb|AY346329.1| Oryza sativa (indica cultivar-group) homeodomain leucine-zipper protein Hox8 mRNA, complete cds Length = 1272 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 |||||||||||||||||| | |||||||||||| |||||||| || |||||||| | Sbjct: 352 gagaagaagcggcggctggcggcggagcaggtgcgggcgctggagcggagcttcgaggcg 411 Query: 93 gccaacaagctggagccggagcg 115 | |||||||||||| |||||||| Sbjct: 412 gacaacaagctggacccggagcg 434 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 156 caggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| ||| |||||||||||||||||||||| | |||||||| |||||| Sbjct: 475 caggtcgccgtctggttccagaaccgccgcgcgaggtggaagaccaagcag 525
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 33 gagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggtg 92 |||||||||||||||||| | |||||||||||| |||||||| || |||||||| | Sbjct: 110483 gagaagaagcggcggctggcggcggagcaggtgcgggcgctggagcggagcttcgaggcg 110542 Query: 93 gccaacaagctggagccggagcg 115 | |||||||||||| |||||||| Sbjct: 110543 gacaacaagctggacccggagcg 110565 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 156 caggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| ||| |||||||||||||||||||||| | |||||||| |||||| Sbjct: 110606 caggtcgccgtctggttccagaaccgccgcgcgaggtggaagaccaagcag 110656
>gb|AY823671.1| Glycine max HDZip I protein mRNA, complete cds Length = 1747 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 154 ggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagctggaga 213 ||||||| || || ||||| |||||||||||||| ||||||||||| |||||| |||| | Sbjct: 901 ggcaggtggcgatttggtttcagaaccgccgcgcgcgctggaagaccaagcagatggaaa 960 Query: 214 aggacta 220 ||||||| Sbjct: 961 aggacta 967
>gb|AY104388.1| Zea mays PCO136074 mRNA sequence Length = 1227 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 96 aacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacagccccgg 155 ||||||||||||||||||||||||| ||||||| ||| ||||| | |||||| Sbjct: 1052 aacaagctggagccggagcgcaagaccgagctggctcgccgcctggggatggcgccccgc 1111 Query: 156 caggttgccatctggttccagaaccgccgcgcccgctggaagacaaagca 205 ||||| || | |||||||||||||||||||| ||||||||||| ||||| Sbjct: 1112 caggtagctgtttggttccagaaccgccgcgcgcgctggaagaccaagca 1161
>ref|XM_478887.1| Oryza sativa (japonica cultivar-group), mRNA Length = 723 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 155 gcaggttgccatctggttccagaaccgccgcgcccgc 191 |||||| ||| |||||||||||||||||||||||||| Sbjct: 303 gcaggtggccgtctggttccagaaccgccgcgcccgc 339
>gb|AY554034.1| Oryza sativa (indica cultivar-group) clone OG05G01 Hox12 (hox12) mRNA, partial cds Length = 1002 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 155 gcaggttgccatctggttccagaaccgccgcgcccgc 191 |||||| ||| |||||||||||||||||||||||||| Sbjct: 256 gcaggtcgccgtctggttccagaaccgccgcgcccgc 292
>gb|AY559047.1| Oryza sativa (japonica cultivar-group) homeodomain leucine zipper protein 14 (hox14) mRNA, complete cds Length = 1173 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 155 gcaggttgccatctggttccagaaccgccgcgcccgc 191 |||||| ||| |||||||||||||||||||||||||| Sbjct: 508 gcaggtggccgtctggttccagaaccgccgcgcccgc 544
>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0058P18, from chromosome 3, complete sequence Length = 155037 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 155 gcaggttgccatctggttccagaaccgccgcgcccgc 191 |||||| ||| |||||||||||||||||||||||||| Sbjct: 19868 gcaggtcgccgtctggttccagaaccgccgcgcccgc 19904
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 155 gcaggttgccatctggttccagaaccgccgcgcccgc 191 |||||| ||| |||||||||||||||||||||||||| Sbjct: 106681 gcaggtcgccgtctggttccagaaccgccgcgcccgc 106717
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 155 gcaggttgccatctggttccagaaccgccgcgcccgc 191 |||||| ||| |||||||||||||||||||||||||| Sbjct: 23506567 gcaggtggccgtctggttccagaaccgccgcgcccgc 23506603
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 155 gcaggttgccatctggttccagaaccgccgcgcccgc 191 |||||| ||| |||||||||||||||||||||||||| Sbjct: 66960 gcaggtggccgtctggttccagaaccgccgcgcccgc 66996
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 155 gcaggttgccatctggttccagaaccgccgcgcccgc 191 |||||| ||| |||||||||||||||||||||||||| Sbjct: 126464 gcaggtggccgtctggttccagaaccgccgcgcccgc 126500
>dbj|AK121889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105B17, full insert sequence Length = 1130 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 155 gcaggttgccatctggttccagaaccgccgcgcccgc 191 |||||| ||| |||||||||||||||||||||||||| Sbjct: 501 gcaggtggccgtctggttccagaaccgccgcgcccgc 537
>dbj|AK073446.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043C24, full insert sequence Length = 1170 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 155 gcaggttgccatctggttccagaaccgccgcgcccgc 191 |||||| ||| |||||||||||||||||||||||||| Sbjct: 512 gcaggtcgccgtctggttccagaaccgccgcgcccgc 548
>dbj|AP006364.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT28B04, TM0170, complete sequence Length = 101172 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgcgcccgctggaagacaaagcagctggagaagga 217 |||||||||||||||||||| || || |||||||| || ||||| |||||||| Sbjct: 44580 atctggttccagaaccgccgtgcacggtggaagacgaaacagcttgagaagga 44528 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 72 ctggagaagaacttcgaggtggccaacaagct 103 |||||||||| ||||||||||| |||||||| Sbjct: 44673 ctggagaagagcttcgaggtggataacaagct 44642
>dbj|AB028073.1| Physcomitrella patens mRNA for homeobox protein PpHB2, partial cds Length = 1593 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcccgctggaagacaaagcagct 208 |||||||||||||| ||||| || ||||||||||||||||| Sbjct: 531 tggttccagaaccgtcgcgcgcgatggaagacaaagcagct 571
>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0027G10 Length = 184759 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 153 cggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 |||||||| ||| | |||||||||||||||||||| | |||||||| |||||||| Sbjct: 36743 cggcaggtggccgtgtggttccagaaccgccgcgcgaggtggaagacgaagcagct 36688
>dbj|AB028076.1| Physcomitrella patens mRNA for homeobox protein PpHB5, complete cds Length = 1650 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcccgctggaagacaaagcagctggag 212 |||||||| |||||||| ||||| |||||||||||||| ||| ||||| Sbjct: 789 atctggtttcagaaccgacgcgcgcgctggaagacaaaacagttggag 836
>gb|AC158179.2| Selaginella moellendorffii clone JGIASXY-5A11, complete sequence Length = 40733 Score = 54.0 bits (27), Expect = 4e-04 Identities = 111/139 (79%) Strand = Plus / Plus Query: 95 caacaagctggagccggagcgcaagatgcagctggcgcgcgcgctgggtctacagccccg 154 ||||||||||||||||||||||||| | ||||| || | || | || |||||||| Sbjct: 32743 caacaagctggagccggagcgcaagctccagcttgccaaagaattgagcctccagccccg 32802 Query: 155 gcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcagctggagaa 214 || ||||| | |||||||| ||| | || ||| | |||||||| |||||||| || || Sbjct: 32803 ccaagttgctgtgtggttccaaaacaggcgggccaggtggaagaccaagcagcttgaaaa 32862 Query: 215 ggactacgacgtgctcaag 233 ||||||||||| ||||||| Sbjct: 32863 ggactacgacgcgctcaag 32881
>emb|AL772364.20| Mouse DNA sequence from clone RP23-242C19 on chromosome 11 Contains a ribosomal protein S16 (Rps16) pseudogene, the B3gnt1 gene for beta-1,3-N-acetylglucosaminyltransferase 1, the Murr1 gene for U2af1-rs1 region 1, the U2af1-rs1 gene for U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 (related sequence 1) and two CpG islands, complete sequence Length = 210863 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 192 tggaagacaaagcagctggagaagg 216 ||||||||||||||||||||||||| Sbjct: 121253 tggaagacaaagcagctggagaagg 121277
>ref|NM_125929.2| Arabidopsis thaliana ATHB5; transcription factor AT5G65310 (ATHB5) transcript variant AT5G65310.1 mRNA, complete cds Length = 1833 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 |||||||| || |||||||| || || ||||||||||||||||| Sbjct: 740 atctggtttcaaaaccgccgtgctcggtggaagacaaagcagct 783
>ref|NM_001037074.1| Arabidopsis thaliana ATHB5 AT5G65310 (ATHB5) transcript variant AT5G65310.2 mRNA, complete cds Length = 1460 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 |||||||| || |||||||| || || ||||||||||||||||| Sbjct: 346 atctggtttcaaaaccgccgtgctcggtggaagacaaagcagct 389
>ref|XM_467056.1| Oryza sativa (japonica cultivar-group), mRNA Length = 918 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 124 agctggcgcgcgcgctgggtctacagccccggcaggttgccatctggttccagaac 179 |||||||||| | ||| || || ||||| || ||||| |||||||||||||||||| Sbjct: 373 agctggcgcgggagctcgggctgcagccgcgccaggtggccatctggttccagaac 428
>ref|XM_545946.2| PREDICTED: Canis familiaris similar to Homeobox protein MSX-1 (Hox-7) (LOC488828), mRNA Length = 776 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 451 atctggttccagaaccgccgcgcc 474
>emb|X65791.1|GDHOX7GNA G.domseticus Hox-7 cDNA, 3' CDS Length = 861 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 233 atctggttccagaaccgccgcgcc 256
>gb|AY091340.1| Arabidopsis thaliana putative homeobox-leucine zipper protein ATHB-5 (HD-zip protein ATHB-5) (At5g65310) mRNA, complete cds Length = 970 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 |||||||| || |||||||| || || ||||||||||||||||| Sbjct: 343 atctggtttcaaaaccgccgtgctcggtggaagacaaagcagct 386
>gb|AY074293.1| Arabidopsis thaliana putative homeobox-leucine zipper protein ATHB-5 (At5g65310) mRNA, complete cds Length = 1851 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 |||||||| || |||||||| || || ||||||||||||||||| Sbjct: 740 atctggtttcaaaaccgccgtgctcggtggaagacaaagcagct 783
>emb|X61922.1|GGHOX7 G. gallus Hox-7 mRNA Length = 796 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 181 atctggttccagaaccgccgcgcc 204
>emb|X03062.1|DMCAD Drosophila caudal (cad) mRNA fragment with homeo-box-sequence from 38E region on left arm of chromosome 2 Length = 591 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 319 atctggttccagaaccgccgcgcc 342
>ref|NM_134301.3| Drosophila melanogaster caudal CG1759-RB, transcript variant B (cad), mRNA Length = 2227 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 1169 atctggttccagaaccgccgcgcc 1192
>ref|NM_057606.4| Drosophila melanogaster caudal CG1759-RA, transcript variant A (cad), mRNA Length = 2519 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 1328 atctggttccagaaccgccgcgcc 1351
>gb|AY069565.1| Drosophila melanogaster LD29596 full length cDNA Length = 2518 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 1306 atctggttccagaaccgccgcgcc 1329
>gb|DQ067481.1|DQ067480S2 Saguinus oedipus msh homeobox 1-like protein (MSX1) gene, exon 2 and complete cds Length = 1124 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 522 atctggttccagaaccgccgcgcc 545
>gb|DQ067479.1|DQ067478S2 Leontopithecus rosalia msh homeobox 1-like protein (MSX1) gene, exon 2 and complete cds Length = 930 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 553 atctggttccagaaccgccgcgcc 576
>gb|DQ067477.1|DQ067476S2 Callithrix jacchus msh homeobox 1-like protein (MSX1) gene, exon 2 and complete cds Length = 1097 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 530 atctggttccagaaccgccgcgcc 553
>gb|DQ067475.1|DQ067474S2 Callimico goeldii msh homeobox 1-like protein (MSX1) gene, exon 2 and complete cds Length = 1153 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 550 atctggttccagaaccgccgcgcc 573
>gb|AF325054.2|AF325054 Arabidopsis thaliana AT5g65310 (AT5g65310/MNA5_4) mRNA, complete cds Length = 1680 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 |||||||| || |||||||| || || ||||||||||||||||| Sbjct: 728 atctggtttcaaaaccgccgtgctcggtggaagacaaagcagct 771
>gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, region 38E-38F, BAC clone BACR07D17, complete sequence Length = 173422 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 51895 atctggttccagaaccgccgcgcc 51918
>emb|BX831827.1|CNS0A0YS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH31ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1525 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 |||||||| || |||||||| || || ||||||||||||||||| Sbjct: 706 atctggtttcaaaaccgccgtgctcggtggaagacaaagcagct 749
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 124 agctggcgcgcgcgctgggtctacagccccggcaggttgccatctggttccagaac 179 |||||||||| | ||| || || ||||| || ||||| |||||||||||||||||| Sbjct: 59011 agctggcgcgggagctcgggctgcagccgcgccaggtggccatctggttccagaac 59066
>dbj|AB011479.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNA5 Length = 88356 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 |||||||| || |||||||| || || ||||||||||||||||| Sbjct: 15465 atctggtttcaaaaccgccgtgctcggtggaagacaaagcagct 15422
>dbj|D82577.1|AMTMSX1P Ambystoma mexicanum mRNA for Msx1 protein, complete cds Length = 1601 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 580 atctggttccagaaccgccgcgcc 603
>emb|X67033.1|ATATHB5 A.thaliana mRNA Athb-5 Length = 1553 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcccgctggaagacaaagcagct 208 |||||||| || |||||||| || || ||||||||||||||||| Sbjct: 688 atctggtttcaaaaccgccgtgctcggtggaagacaaagcagct 731
>dbj|AK063685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-F01, full insert sequence Length = 918 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 124 agctggcgcgcgcgctgggtctacagccccggcaggttgccatctggttccagaac 179 |||||||||| | ||| || || ||||| || ||||| |||||||||||||||||| Sbjct: 373 agctggcgcgggagctcgggctgcagccgcgccaggtggccatctggttccagaac 428
>gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77 of 83 of the complete sequence Length = 270158 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 41709 atctggttccagaaccgccgcgcc 41732
>ref|NM_205488.1| Gallus gallus msh homeobox homolog 1 (Drosophila) (MSX1), mRNA Length = 1310 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 697 atctggttccagaaccgccgcgcc 720
>gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s DS04217 (D56) and DS00582 (D85)), complete sequence Length = 142799 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 37642 atctggttccagaaccgccgcgcc 37619
>gb|AY525844.1| Ambystoma mexicanum Msx1 protein (msx1) mRNA, complete cds Length = 920 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 678 atctggttccagaaccgccgcgcc 701
>gb|M76985.1|CHKHBOX7A Chicken homeobox (Hbox 7) mRNA, complete cds Length = 1259 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 678 atctggttccagaaccgccgcgcc 701
>gb|M21070.1|DROCADA2 D.melanogaster caudal gene (cad) encoding a maternal and zygotic transcript, exon 2 Length = 1430 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 208 atctggttccagaaccgccgcgcc 231
>dbj|D10372.1|CHKHOX7 Gallus gallus mRNA for Chox-7 protein, complete cds Length = 1310 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgcc 188 |||||||||||||||||||||||| Sbjct: 697 atctggttccagaaccgccgcgcc 720
>gb|AY336103.1| Brassica napus homeodomain-leucine zipper protein mRNA, complete cds Length = 1572 Score = 46.1 bits (23), Expect = 0.098 Identities = 41/47 (87%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcccgctggaagacaaagcagctggagaa 214 ||||| ||||||||||| || || ||||||||||| ||||| ||||| Sbjct: 522 tggtttcagaaccgccgtgcgcggtggaagacaaaacagctcgagaa 568
>emb|X16159.1|GDCHOX7 Chicken DNA for CHox 7 homeo box gene Length = 374 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgc 187 ||||||||||||||||||||||| Sbjct: 209 atctggttccagaaccgccgcgc 231
>emb|AJ004903.1|GGJ004903 Gallus gallus mRNA for CMIX homeobox gene, partial cds Length = 409 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 166 tctggttccagaaccgccgcgcc 188 ||||||||||||||||||||||| Sbjct: 148 tctggttccagaaccgccgcgcc 170
>ref|NM_204659.1| Gallus gallus transcription factor Gbx-1 (GBX-1), mRNA Length = 1109 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgc 187 ||||||||||||||||||||||| Sbjct: 650 atctggttccagaaccgccgcgc 672
>ref|NM_204990.1| Gallus gallus CMIX homeobox gene (CMIX), mRNA Length = 886 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 166 tctggttccagaaccgccgcgcc 188 ||||||||||||||||||||||| Sbjct: 312 tctggttccagaaccgccgcgcc 334
>gb|AF268422.1|AF268422 Brassica rapa subsp. pekinensis hb-6-like protein mRNA, complete cds Length = 1333 Score = 46.1 bits (23), Expect = 0.098 Identities = 41/47 (87%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcccgctggaagacaaagcagctggagaa 214 ||||| ||||||||||| || || ||||||||||| ||||| ||||| Sbjct: 454 tggtttcagaaccgccgtgcgcggtggaagacaaaacagctcgagaa 500
>gb|U34615.1|GGU34615 Gallus gallus homeobox protein CMIX mRNA, complete cds Length = 886 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 166 tctggttccagaaccgccgcgcc 188 ||||||||||||||||||||||| Sbjct: 312 tctggttccagaaccgccgcgcc 334
>dbj|AB050015.1| Gallus gallus Gbx-1 mRNA for transcription factor Gbx-1, complete cds Length = 1109 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcgc 187 ||||||||||||||||||||||| Sbjct: 650 atctggttccagaaccgccgcgc 672
>dbj|AB028077.1| Physcomitrella patens mRNA for homeobox protein PpHB6, complete cds Length = 1802 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 32 cgagaagaagcggcggctgaacgtggagcaggtgcgcacgctggagaagaacttcgaggt 91 ||||||||||||| |||||| | || |||||| | ||||||||| ||| |||||| | Sbjct: 530 cgagaagaagcggaggctgactttcgaccaggtgaggtcgctggagaggaatttcgagat 589 Query: 92 ggccaacaagctggagccggagcgcaagatgcagctggc 130 || |||||||| ||||| || || || ||||||||||| Sbjct: 590 ggagaacaagctcgagcctgaacggaaaatgcagctggc 628
>ref|XM_480923.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1247 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 167 ctggttccagaaccgccgcgcccgct 192 ||||||||||||||||||| |||||| Sbjct: 449 ctggttccagaaccgccgctcccgct 474
>ref|XM_427550.1| PREDICTED: Gallus gallus similar to homeobox protein GSH-2 (LOC429994), partial mRNA Length = 341 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgcg 186 |||||||||||||||||||||| Sbjct: 168 atctggttccagaaccgccgcg 189
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 74 ggagaagaacttcgaggtggccaacaagct 103 |||||||| |||||||||||||||||||| Sbjct: 1913955 ggagaagatattcgaggtggccaacaagct 1913926
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| |||||||||||||||||| ||||| || |||||| | |||||| Sbjct: 149997 cagcctcgccaggtcgccatctggttccagaacaagcgcgcgcggtggaagtccaagcag 150056 Query: 207 ct 208 || Sbjct: 150057 ct 150058
>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0087F21 Length = 187401 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 167 ctggttccagaaccgccgcgcccgct 192 ||||||||||||||||||| |||||| Sbjct: 145880 ctggttccagaaccgccgctcccgct 145855
>gb|AF145730.1|AF145730 Oryza sativa homeodomain leucine zipper protein (Oshox6) mRNA, partial cds Length = 1057 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| |||||||||||||||||| ||||| || |||||| | |||||| Sbjct: 267 cagcctcgccaggtcgccatctggttccagaacaagcgcgcgcggtggaagtccaagcag 326 Query: 207 ct 208 || Sbjct: 327 ct 328
>dbj|AK107305.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-D01, full insert sequence Length = 1247 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 167 ctggttccagaaccgccgcgcccgct 192 ||||||||||||||||||| |||||| Sbjct: 449 ctggttccagaaccgccgctcccgct 474
>dbj|AK103160.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121C04, full insert sequence Length = 1182 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| |||||||||||||||||| ||||| || |||||| | |||||| Sbjct: 272 cagcctcgccaggtcgccatctggttccagaacaagcgcgcgcggtggaagtccaagcag 331 Query: 207 ct 208 || Sbjct: 332 ct 333
>dbj|AK059755.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C03, full insert sequence Length = 1151 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 147 cagccccggcaggttgccatctggttccagaaccgccgcgcccgctggaagacaaagcag 206 ||||| || ||||| |||||||||||||||||| ||||| || |||||| | |||||| Sbjct: 228 cagcctcgccaggtcgccatctggttccagaacaagcgcgcgcggtggaagtccaagcag 287 Query: 207 ct 208 || Sbjct: 288 ct 289
>emb|AM234775.1| Zea mays partial mRNA for WOX11/12B protein Length = 195 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 167 ctggttccagaaccgccgcgcccgct 192 ||||||||||||||||||| |||||| Sbjct: 156 ctggttccagaaccgccgctcccgct 181
>emb|AM234774.1| Zea mays partial mRNA for WOX11/12A protein (wox9C gene) Length = 195 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 167 ctggttccagaaccgccgcgcccgct 192 ||||||||||||||||||| |||||| Sbjct: 156 ctggttccagaaccgccgctcccgct 181
>dbj|AP006682.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT39I02, TM0377a, complete sequence Length = 27406 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 192 tggaagacaaagcagctggagaaggactacgacgtgctcaag 233 |||||||||||||| || |||||||| || || ||||||||| Sbjct: 8544 tggaagacaaagcatcttgagaaggagtatgaagtgctcaag 8585
>gb|AY308812.1| Canis familiaris homeobox A7 gene, partial sequence Length = 290 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 37 atctggttccagaaccgccgc 57
>ref|NM_121519.2| Arabidopsis thaliana ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3); DNA binding / transcription factor AT5G15150 (ATHB-3) mRNA, complete cds Length = 1480 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 75 gagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcagct 127 ||||||| ||||||| | | |||||||||||||| ||| | ||||||||||| Sbjct: 665 gagaagagcttcgagctagggaacaagctggagccagagaggaagatgcagct 717
>gb|BC075858.1| Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 2, mRNA (cDNA clone IMAGE:3899827), partial cds Length = 4141 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 ggctgaacgtggagcaggtgcgcacgctg 74 |||||| ||||||||||||| |||||||| Sbjct: 106 ggctgagcgtggagcaggtgggcacgctg 134
>gb|AC150428.3| Branchiostoma floridae clone CH302-86J11, complete sequence Length = 193518 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 135220 atctggttccagaaccgccgc 135200 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccg 184 |||||||||||||||||||| Sbjct: 182391 atctggttccagaaccgccg 182372
>gb|AC150426.3| Branchiostoma floridae clone CH302-83B17, complete sequence Length = 192173 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 66687 atctggttccagaaccgccgc 66667
>ref|XM_512650.1| PREDICTED: Pan troglodytes similar to FLJ00018 protein (LOC456022), mRNA Length = 5842 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 ggctgaacgtggagcaggtgcgcacgctg 74 |||||| ||||||||||||| |||||||| Sbjct: 1175 ggctgagcgtggagcaggtgggcacgctg 1203
>ref|XM_508090.1| PREDICTED: Pan troglodytes similar to homeodomain protein (LOC450798), mRNA Length = 2142 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 1885 atctggttccagaaccgccgc 1905
>ref|XM_519011.1| PREDICTED: Pan troglodytes similar to homeobox protein A7; homeobox protein HOX-1A (LOC463310), mRNA Length = 3852 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 1603 atctggttccagaaccgccgc 1623 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 724 atctggttccagaaccgccgc 744
>ref|XM_526562.1| PREDICTED: Pan troglodytes similar to Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox) (LOC471180), mRNA Length = 1182 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 889 tggttccagaaccgccgcgcc 909
>ref|XM_517087.1| PREDICTED: Pan troglodytes similar to MSX1 protein (LOC461092), mRNA Length = 1905 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 1624 tggttccagaaccgccgcgcc 1644
>ref|NM_022835.1| Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 2 (PLEKHG2), mRNA Length = 4703 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 ggctgaacgtggagcaggtgcgcacgctg 74 |||||| ||||||||||||| |||||||| Sbjct: 741 ggctgagcgtggagcaggtgggcacgctg 769
>ref|NM_053651.1| Rattus norvegicus NK2 transcription factor related, locus 5 (Drosophila) (Nkx2-5), mRNA Length = 1342 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 640 atctggttccagaaccgccgc 660
>ref|XM_428966.1| PREDICTED: Gallus gallus similar to TRANSCRIPTION FACTOR LBX1 (LOC431414), partial mRNA Length = 421 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 ctggttccagaaccgccgcgc 187 ||||||||||||||||||||| Sbjct: 349 ctggttccagaaccgccgcgc 369
>ref|XM_600319.2| PREDICTED: Bos taurus similar to H6 homeo box 3 (LOC522046), mRNA Length = 1080 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 823 atctggttccagaaccgccgc 843
>gb|BC058852.1| Mus musculus distal-less homeobox 3, mRNA (cDNA clone MGC:60844 IMAGE:30012395), complete cds Length = 2631 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 726 atctggttccagaaccgccgc 746
>gb|AY640310.1| Gallus gallus homeodomain transcription factor DLX3 (DLX3) mRNA, complete cds Length = 1150 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 597 atctggttccagaaccgccgc 617
>gb|BC017199.2| Homo sapiens paired-like homeobox 2b, mRNA (cDNA clone MGC:1678 IMAGE:3161284), complete cds Length = 1497 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 529 tggttccagaaccgccgcgcc 549
>ref|XM_867772.1| PREDICTED: Bos taurus similar to homeobox protein A7 (LOC615851), mRNA Length = 666 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 526 atctggttccagaaccgccgc 546
>ref|XM_865011.1| PREDICTED: Bos taurus similar to homeobox protein A6, transcript variant 1 (LOC614264), mRNA Length = 1189 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 930 atctggttccagaaccgccgc 950
>ref|XM_874745.1| PREDICTED: Bos taurus similar to homeobox protein A6, transcript variant 6 (LOC614264), mRNA Length = 685 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 418 atctggttccagaaccgccgc 438
>ref|XM_874660.1| PREDICTED: Bos taurus similar to homeobox protein A6, transcript variant 5 (LOC614264), mRNA Length = 1049 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 948 atctggttccagaaccgccgc 968
>ref|XM_874574.1| PREDICTED: Bos taurus similar to homeobox protein A6, transcript variant 4 (LOC614264), mRNA Length = 1040 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 939 atctggttccagaaccgccgc 959
>ref|XM_874491.1| PREDICTED: Bos taurus similar to homeobox protein A6, transcript variant 3 (LOC614264), mRNA Length = 850 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 687 atctggttccagaaccgccgc 707
>ref|XM_874415.1| PREDICTED: Bos taurus similar to homeobox protein A6, transcript variant 2 (LOC614264), mRNA Length = 1015 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 757 atctggttccagaaccgccgc 777
>ref|NM_002448.2| Homo sapiens msh homeobox homolog 1 (Drosophila) (MSX1), mRNA Length = 1944 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 883 tggttccagaaccgccgcgcc 903
>gb|AC149031.1| Rhinolophus ferrumequinum clone VMRC7-44G7, complete sequence Length = 192138 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 113958 atctggttccagaaccgccgc 113978
>gb|AC149030.1| Dasypus novemcinctus clone VMRC5-81F18, complete sequence Length = 154373 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 84462 atctggttccagaaccgccgc 84442
>gb|AY554038.1| Oryza sativa (japonica cultivar-group) Hox11 (hox11) gene, exons 2, 3 and partial cds Length = 307 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 230 tggttccagaaccgccgcgcc 250
>gb|AY559046.1| Oryza sativa (japonica cultivar-group) homeodomain leucine zipper protein 11 (hox11) mRNA, partial cds Length = 272 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 123 tggttccagaaccgccgcgcc 143
>ref|XM_848885.1| PREDICTED: Canis familiaris similar to Homeobox protein HMX3 (Homeobox protein Nkx-5.1) (LOC611245), mRNA Length = 2682 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 2428 atctggttccagaaccgccgc 2448
>gb|AC146102.2| Pan troglodytes BAC clone RP43-21L13 from 7, complete sequence Length = 191971 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 158906 atctggttccagaaccgccgc 158886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 149522 atctggttccagaaccgccgc 149502 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccg 184 |||||||||||||||||||| Sbjct: 98405 atctggttccagaaccgccg 98386
>ref|XM_849048.1| PREDICTED: Canis familiaris similar to homeobox protein A6 (LOC611383), mRNA Length = 857 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 601 atctggttccagaaccgccgc 621
>ref|XM_859585.1| PREDICTED: Canis familiaris similar to homeobox protein A7, transcript variant 5 (LOC482371), mRNA Length = 1042 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 652 atctggttccagaaccgccgc 672
>ref|XM_859566.1| PREDICTED: Canis familiaris similar to homeobox protein A7, transcript variant 4 (LOC482371), mRNA Length = 763 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 629 atctggttccagaaccgccgc 649
>ref|XM_859553.1| PREDICTED: Canis familiaris similar to homeobox protein A7, transcript variant 3 (LOC482371), mRNA Length = 685 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 629 atctggttccagaaccgccgc 649
>ref|XM_539488.2| PREDICTED: Canis familiaris similar to homeobox protein A7, transcript variant 1 (LOC482371), mRNA Length = 823 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 629 atctggttccagaaccgccgc 649
>ref|XM_847747.1| PREDICTED: Canis familiaris similar to Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox) (LOC610284), mRNA Length = 945 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 433 tggttccagaaccgccgcgcc 453
>gb|AC124345.4| Mus musculus BAC clone RP24-459N19 from chromosome 15, complete sequence Length = 184532 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 23837 atctggttccagaaccgccgc 23817
>ref|NM_204804.1| Gallus gallus DLX3 homeodomain containing protein (DLX3), mRNA Length = 1150 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 597 atctggttccagaaccgccgc 617
>ref|NM_003924.2| Homo sapiens paired-like homeobox 2b (PHOX2B), mRNA Length = 3029 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 793 tggttccagaaccgccgcgcc 813
>gb|AY383550.1| Pleurodeles waltl transcription factor HoxB3 mRNA, complete cds Length = 1802 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 945 atctggttccagaaccgccgc 965
>gb|AC142285.1| Pan troglodytes BAC clone RP43-169B4 from 7, complete sequence Length = 170237 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 169452 atctggttccagaaccgccgc 169432 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccg 184 |||||||||||||||||||| Sbjct: 118324 atctggttccagaaccgccg 118305
>emb|X68045.1|BFHOMEOG B.floridae gene for amphihox3 Length = 3477 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 2264 atctggttccagaaccgccgc 2284
>ref|NM_010465.1| Mus musculus homeo box C6 (Hoxc6), mRNA Length = 1691 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 686 atctggttccagaaccgccgc 706
>gb|BC061916.1| Homo sapiens cDNA clone IMAGE:4367439, containing frame-shift errors Length = 924 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 633 atctggttccagaaccgccgc 653
>gb|AC012391.10| Homo sapiens chromosome 10 clone RP11-162A23, complete sequence Length = 181948 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 90012 atctggttccagaaccgccgc 90032
>gb|AY194847.1| Zaprionus vittiger Scr protein (Scr) gene, partial cds Length = 108 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 85 atctggttccagaaccgccgc 105
>gb|AY194845.1| Hirtodrosophila pictiventris Scr protein (Scr) gene, partial cds Length = 108 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 85 atctggttccagaaccgccgc 105
>gb|AY194844.1| Drosophila heteroneura Scr protein (Scr) gene, partial cds Length = 108 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 85 atctggttccagaaccgccgc 105
>gb|AY194835.1| Zaprionus vittiger Antp protein (Antp) gene, partial cds Length = 108 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 85 atctggttccagaaccgccgc 105
>gb|AY194833.1| Hirtodrosophila pictiventris Antp protein (Antp) gene, partial cds Length = 108 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 85 atctggttccagaaccgccgc 105
>gb|AY194832.1| Drosophila heteroneura Antp protein (Antp) gene, partial cds Length = 108 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 85 atctggttccagaaccgccgc 105
>gb|AY194826.1| Drosophila heteroneura AbdA protein (AbdA) gene, partial cds Length = 108 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 85 atctggttccagaaccgccgc 105
>gb|AY194823.1| Zaprionus vittiger Ftz protein (ftz) gene, partial cds Length = 108 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 85 atctggttccagaaccgccgc 105
>gb|AY194821.1| Hirtodrosophila pictiventris Ftz protein (ftz) gene, partial cds Length = 108 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 85 atctggttccagaaccgccgc 105
>gb|AY194820.1| Drosophila heteroneura Ftz protein (ftz) gene, partial cds Length = 108 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 85 atctggttccagaaccgccgc 105
>gb|AY194819.1| Chymomyza amoena Ftz protein (ftz) gene, partial cds Length = 108 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 85 atctggttccagaaccgccgc 105
>gb|AY194818.1| Drosophila adiastola Ftz protein (ftz) gene, partial cds Length = 108 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 85 atctggttccagaaccgccgc 105
>gb|AY194812.1| Zaprionus vittiger AbdB protein (abdB) gene, partial cds Length = 187 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 164 atctggttccagaaccgccgc 184
>gb|AY194808.1| Zaprionus vittiger Dfd protein (dfd) gene, partial cds Length = 108 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 85 atctggttccagaaccgccgc 105
>gb|AY194804.1| Scaptodrosophila pattersoni Dfd protein (dfd) gene, partial cds Length = 108 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 85 atctggttccagaaccgccgc 105
>gb|AC144400.2| Lemur catta clone LBNL2-87E20, complete sequence Length = 181705 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 131551 atctggttccagaaccgccgc 131571
>gb|AF426432.1| Homo sapiens muscle segment homeobox 1 (MSX1) gene, complete cds Length = 5173 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 3432 tggttccagaaccgccgcgcc 3452
>ref|XM_968375.1| PREDICTED: Tribolium castaneum similar to Retinal homeobox protein Rx (DRx1) (DRx) (LOC662264), mRNA Length = 837 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 469 tggttccagaaccgccgcgcc 489
>emb|Y15989.1|GGY15989 Gallus gallus Nkx5-1 gene Length = 1190 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 942 atctggttccagaaccgccgc 962
>emb|Y11717.1|MMHOXA3 M.musculus mRNA for hoxa3 gene Length = 1929 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 1095 atctggttccagaaccgccgc 1115
>ref|XM_777884.1| PREDICTED: Strongylocentrotus purpuratus similar to CG1650-PA (LOC577669), mRNA Length = 1419 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 1096 tggttccagaaccgccgcgcc 1116
>emb|X73981.1|SGSCRHPH S.gregaria gene for sex combs reduced homeodomain protein homologue (partial) Length = 750 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 499 atctggttccagaaccgccgc 519
>emb|X62644.1|ATHB3MR A.thaliana mRNA for homeobox-leucine zipper protein Athb-3 Length = 656 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 75 gagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcagct 127 ||||||| ||||||| | | |||||||||||||| ||| | ||||||||||| Sbjct: 289 gagaagagcttcgagctagggaacaagctggagccagagaggaagatgcagct 341
>emb|X54674.1|SGHBEX S. gregaria DNA homologue of Drosophila abdominal-A homeobox exon Length = 657 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 217 atctggttccagaaccgccgc 237
>emb|X16511.1|MMHXPR2 Mouse mRNA for HOX 3.3 PRII transcript Length = 1691 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 686 atctggttccagaaccgccgc 706
>emb|X16510.1|MMHXPR Mouse mRNA for Hox 3.3 PRI transcript Length = 1569 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 564 atctggttccagaaccgccgc 584
>emb|X13103.1|DMLABR Drosophila melanogaster mRNA for labial protin (lab gene) Length = 2159 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 1238 atctggttccagaaccgccgc 1258
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 tgcagctggcgcgcgcgctgg 141 ||||||||||||||||||||| Sbjct: 141420 tgcagctggcgcgcgcgctgg 141440
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 tgcagctggcgcgcgcgctgg 141 ||||||||||||||||||||| Sbjct: 253838 tgcagctggcgcgcgcgctgg 253858
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 tgcagctggcgcgcgcgctgg 141 ||||||||||||||||||||| Sbjct: 238448 tgcagctggcgcgcgcgctgg 238468
>emb|AL606480.11| Mouse DNA sequence from clone RP23-112C19 on chromosome 11 Contains the 3' end of the Col1a1 gene for procollagen type I alpha 1, the Sgca gene for alpha sarcoglycan (dystrophin-associated glycoprotein), the Hils1 gene for histone H1-like protein in spermatids 1, the Ppp1r9b gene for protein phosphatase 1 regulatory subunit 9B, a novel gene (A930041A10Rik, B930032I08Rik, C530046K03Rik), the Pdk2 gene for pyruvate dehydrogenase kinase isoenzyme 2, a novel gene, the Itga3 gene for integrin alpha 3, the Dlx3 gene for distal-less homeobox 3 and three CpG islands, complete sequence Length = 186276 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 177335 atctggttccagaaccgccgc 177355
>emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome 5, BAC clone F8M21 (ESSA project) Length = 103996 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 75 gagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcagct 127 ||||||| ||||||| | | |||||||||||||| ||| | ||||||||||| Sbjct: 18980 gagaagagcttcgagctagggaacaagctggagccagagaggaagatgcagct 18928
>gb|AC136964.2| Sus scrofa domestica clone RP44-154L9, complete sequence Length = 164640 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 124705 atctggttccagaaccgccgc 124725
>emb|AJ243432.1|GGA243432 Gallus gallus mRNA for DLX3 protein Length = 1150 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 597 atctggttccagaaccgccgc 617
>emb|AJ005814.1|HSA5814 Homo sapiens mRNA for hoxA7 protein Length = 2064 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 632 atctggttccagaaccgccgc 652
>emb|AJ575210.1|PMA575210 Pecten maximus partial vox2 gene for homeobox protein VOX2 Length = 99 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 79 atctggttccagaaccgccgc 99
>ref|NM_001007985.1| Gallus gallus homeo box (H6 family) 3 (HMX3), mRNA Length = 927 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 679 atctggttccagaaccgccgc 699
>gb|AF410914.1| Petromyzon marinus HoxL5/6 homeobox gene, partial cds Length = 180 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 139 atctggttccagaaccgccgc 159
>gb|AF410913.1| Petromyzon marinus HoxK6 homeobox gene, partial cds Length = 180 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 139 atctggttccagaaccgccgc 159
>ref|NM_006896.3| Homo sapiens homeobox A7 (HOXA7), mRNA Length = 2018 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 658 atctggttccagaaccgccgc 678
>gb|AF006664.1| Rattus norvegicus tinman homolog (rNKx-2.5) mRNA, complete cds Length = 1342 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 640 atctggttccagaaccgccgc 660
>dbj|AK096334.1| Homo sapiens cDNA FLJ39015 fis, clone NT2RP7001074 Length = 3219 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 2372 atctggttccagaaccgccgc 2352
>gb|AY095089.1| Drosophila melanogaster RE63854 full insert cDNA Length = 2791 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 1883 atctggttccagaaccgccgc 1903
>gb|AF452637.1| Mus musculus distal-less homeo box 7 (Dlx7) and distal-less homeo box 3 (Dlx3) genes, complete cds Length = 78651 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 67531 atctggttccagaaccgccgc 67511
>gb|AC116608.1| Papio hamadryas chromosome , clone RP41-155I24, complete sequence Length = 161654 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 116936 atctggttccagaaccgccgc 116956
>ref|NM_057265.3| Drosophila melanogaster labial CG1264-RA (lab), mRNA Length = 2784 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 1883 atctggttccagaaccgccgc 1903
>gb|AC092437.4| Homo sapiens BAC clone RP11-326I19 from 4, complete sequence Length = 203583 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 82959 tggttccagaaccgccgcgcc 82979
>gb|AC105389.3| Homo sapiens BAC clone RP11-227F19 from 4, complete sequence Length = 187067 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 103029 tggttccagaaccgccgcgcc 103009
>gb|AC004080.2| Homo sapiens PAC clone RP1-170O19 from 7p15-p21, complete sequence Length = 129355 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 28446 atctggttccagaaccgccgc 28426 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 19129 atctggttccagaaccgccgc 19109
>ref|NM_010452.2| Mus musculus homeo box A3 (Hoxa3), mRNA Length = 2534 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 1021 atctggttccagaaccgccgc 1041
>ref|NM_010055.2| Mus musculus distal-less homeobox 3 (Dlx3), mRNA Length = 2631 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 726 atctggttccagaaccgccgc 746
>ref|XM_940542.1| PREDICTED: Homo sapiens homeobox (H6 family) 3 (HMX3), mRNA Length = 2163 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 1906 atctggttccagaaccgccgc 1926
>ref|XM_291716.6| PREDICTED: Homo sapiens homeobox (H6 family) 3 (HMX3), mRNA Length = 2163 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 1906 atctggttccagaaccgccgc 1926
>gb|AY633714.1| Gallus gallus ladybird-like homeobox 3 (Lbx3) mRNA, complete cds Length = 1072 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 ctggttccagaaccgccgcgc 187 ||||||||||||||||||||| Sbjct: 715 ctggttccagaaccgccgcgc 735
>gb|AC161061.2| Pan troglodytes BAC clone CH251-489A6 from chromosome 7, complete sequence Length = 177652 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 90937 atctggttccagaaccgccgc 90917 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 81543 atctggttccagaaccgccgc 81523 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccg 184 |||||||||||||||||||| Sbjct: 30418 atctggttccagaaccgccg 30399
>gb|DQ083928.1| Pseudomonas fluorescens strain 2P24 phl 2,4-DAPG gene cluster, complete sequence Length = 8137 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 gtgctcaagcgccagttcgac 245 ||||||||||||||||||||| Sbjct: 6628 gtgctcaagcgccagttcgac 6648
>gb|S69380.1| SOHo-1=sensory organ homeobox-1 [chickens, embryonic retina, mRNA, 1819 nt] Length = 1819 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 552 atctggttccagaaccgccgc 572
>gb|AC095013.1| Drosophila melanogaster, chromosome 3R, region 83F-83F, BAC clone BACR19I14, complete sequence Length = 175648 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 127957 atctggttccagaaccgccgc 127937
>gb|S81932.1| Dlx-3=Distal-less homeobox gene [mice, FVB/N, embryos, mRNA Partial, 1295 nt] Length = 1295 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 523 atctggttccagaaccgccgc 543
>gb|S74448.1| D1x-7=Distal-less homeobox [mice, C57B1, CD1, fetuses, tooth germ, mRNA Partial, 342 nt] Length = 342 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 115 atctggttccagaaccgccgc 135
>gb|S74185.1| Mus sp. homeobox protein 3.3 (Hox3.3) gene, complete cds Length = 2279 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 1261 atctggttccagaaccgccgc 1281
>gb|DQ067471.1|DQ067470S2 Macaca mulatta msh homeobox 1-like protein (MSX1) gene, exon 2 and complete cds Length = 1071 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 471 tggttccagaaccgccgcgcc 491
>gb|DQ067469.1|DQ067468S2 Pan troglodytes verus msh homeobox 1-like protein (MSX1) gene, exon 2 and complete cds Length = 1429 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 829 tggttccagaaccgccgcgcc 849
>gb|DQ067483.1| Perodicticus potto msh homeobox 1-like protein (MSX1) gene, complete cds Length = 3504 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 tggttccagaaccgccgcgcc 188 ||||||||||||||||||||| Sbjct: 2881 tggttccagaaccgccgcgcc 2901
>gb|AF026397.1|AF026397 Homo sapiens homeobox transcription factor HOXA7 (HOXA7) mRNA, complete cds Length = 954 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 658 atctggttccagaaccgccgc 678
>gb|AC124805.3| Branchiostoma floridae, clone -25B24, complete sequence Length = 67731 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 12030 atctggttccagaaccgccgc 12050
>dbj|AK050798.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030020G19 product:HOMEOBOX PROTEIN HOX-C6 (HOX-3.3) (HOX-6.1), full insert sequence Length = 1361 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 371 atctggttccagaaccgccgc 391
>dbj|AK076761.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930435C08 product:homeo box A3, full insert sequence Length = 1597 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 99 atctggttccagaaccgccgc 119
>gb|BC096612.1| Mus musculus homeo box A3, mRNA (cDNA clone MGC:106040 IMAGE:6476230), complete cds Length = 2534 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 1021 atctggttccagaaccgccgc 1041
>dbj|AK053218.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030043K17 product:homeo box A3, full insert sequence Length = 1653 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 186 atctggttccagaaccgccgc 206
>gb|AE001572.2| Drosophila melanogaster Antennapedia complex (ANT-C),complete sequence Length = 429825 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 atctggttccagaaccgccgc 185 ||||||||||||||||||||| Sbjct: 394506 atctggttccagaaccgccgc 394526 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,348,061 Number of Sequences: 3902068 Number of extensions: 3348061 Number of successful extensions: 87268 Number of sequences better than 10.0: 527 Number of HSP's better than 10.0 without gapping: 535 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85240 Number of HSP's gapped (non-prelim): 1995 length of query: 448 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 426 effective length of database: 17,147,199,772 effective search space: 7304707102872 effective search space used: 7304707102872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
