>SYN1_HUMAN (P17600) Synapsin-1 (Synapsin I) (Brain protein 4.1)|
          Length = 705

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
 Frame = +3

Query: 6   VPRPIPTSASKP*STATEEGGRIEG----ARPSGGWPYLRSEPPALKIPASPSPSLSRG- 170
           +P+ +P+  S P   A++     +G    +RP  G P     PPA + PASPSP    G 
Sbjct: 504 LPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGP---GAPPAARPPASPSPQRQAGP 560

Query: 171 -RRVMRSSVAGIA 206
            +   ++SV+G A
Sbjct: 561 PQATRQTSVSGPA 573

>SYN1_BOVIN (P17599) Synapsin-1 (Synapsin I)|
          Length = 706

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
 Frame = +3

Query: 6   VPRPIPTSASKP*STATEEGGRIEG----ARPSGGWPYLRSEPPALKIPASPSPSLSRG- 170
           +P+ +P+  S P   A++     +G    +RP  G P     PPA + PASPSP    G 
Sbjct: 504 LPQRLPSPTSVPQQPASQATPMTQGQGRQSRPVAGGP---GAPPATRPPASPSPQRQAGP 560

Query: 171 -RRVMRSSVAGIA 206
            +   ++SV+G A
Sbjct: 561 PQATRQTSVSGQA 573

>SYN1_RAT (P09951) Synapsin-1 (Synapsin I)|
          Length = 704

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
 Frame = +3

Query: 6   VPRPIPTSASKP*STATEEGGRIEG----ARPSGGWPYLRSEPPALKIPASPSPSLSRG- 170
           +P+ +P+  + P  +A++     +G    +RP  G P     PPA + PASPSP    G 
Sbjct: 502 LPQRLPSPTAAPQQSASQATPMTQGQGRQSRPVAGGP---GAPPAARPPASPSPQRQAGP 558

Query: 171 -RRVMRSSVAGIA 206
            +   ++S++G A
Sbjct: 559 PQATRQASISGPA 571

>SYN1_CANFA (O62732) Synapsin-1 (Synapsin I) (Fragment)|
          Length = 415

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
 Frame = +3

Query: 15  PIPTSASKP*STATEEGGRIEG--ARPSGGWPYLRSEPPALKIPASPSPSLSRG--RRVM 182
           P PTSA +   +  +   + +G  +RP  G P     PPA + PASPSP    G  +   
Sbjct: 237 PSPTSAPQQPVSQAQPLSQAQGRQSRPVAGGP---GAPPAARPPASPSPQRQAGPPQATR 293

Query: 183 RSSVAGIA 206
           ++SV+G A
Sbjct: 294 QTSVSGQA 301

>SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I)|
          Length = 706

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
 Frame = +3

Query: 6   VPRPIPTSASKP*STATEEGGRIEG----ARPSGGWPYLRSEPPALKIPASPSPSLSRG- 170
           +P+ +P+  + P  +A++     +G    +RP  G P     PPA + PASPSP    G 
Sbjct: 504 LPQRLPSPTAAPQQSASQATPVTQGQGRQSRPVAGGP---GAPPAARPPASPSPQRQAGA 560

Query: 171 -RRVMRSSVAGIA 206
            +   ++S++G A
Sbjct: 561 PQATRQASISGPA 573

>T240L_MOUSE (Q6JPI3) Thyroid hormone receptor-associated protein 2 (Thyroid|
            hormone receptor-associated protein complex 240 kDa
            component-like)
          Length = 2207

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
 Frame = -2

Query: 223  PASY---DRAMPATEDLITLLPRESDGDGDAGILSAGGSDLRYGQPPLGRAPSILPPSSV 53
            PA+Y   D   P  +D+   LP   D D D GIL  G     +  P     PS   PS +
Sbjct: 2006 PANYPNEDGFSPNNDDMFVDLPFPDDMDNDIGILMTGN---LHSSPNSSPVPSPGSPSGI 2062

Query: 52   AV 47
             V
Sbjct: 2063 GV 2064

>SYNPO_RAT (Q9Z327) Synaptopodin|
          Length = 931

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -2

Query: 118 SDLRYGQPPLGRAPSILPPSS 56
           S + +G PPL RAP+I+ PSS
Sbjct: 63  SRVNHGTPPLSRAPAIIQPSS 83

>T240L_HUMAN (Q71F56) Thyroid hormone receptor-associated protein 2 (Thyroid|
            hormone receptor-associated protein complex 240 kDa
            component-like)
          Length = 2210

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
 Frame = -2

Query: 223  PASY---DRAMPATEDLITLLPRESDGDGDAGILSAGGSDLRYGQPPLGRAPSILPPSSV 53
            PA+Y   D   P  +D+   LP   D D D GIL  G     +  P     PS   PS +
Sbjct: 2009 PANYPNEDGFSPNNDDMFVDLPFPDDMDNDIGILMTGN---LHSSPNSSPVPSPGSPSGI 2065

Query: 52   AV 47
             V
Sbjct: 2066 GV 2067

>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +3

Query: 24  TSASKP*STATEEGGRIEGARPSGGWPYLRS-EPPALKIP-ASPSPSLSRGRRVMRSSVA 197
           +S+S   S+++ EG   EG RP  G P  R+  PP+   P A+P PS S       S+ A
Sbjct: 394 SSSSSSSSSSSSEGEEDEGVRP--GAPLARAGPPPSPPAPAAAPRPSASSASATSSSAAA 451

Query: 198 GIA 206
             A
Sbjct: 452 SPA 454

>ADA19_MOUSE (O35674) ADAM 19 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase domain 19) (Meltrin beta)
          Length = 920

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 16/72 (22%)
 Frame = +3

Query: 9    PRPIPTSASKP*STATEEGGRIE----GARPSGGWP------------YLRSEPPALKIP 140
            P P+P   ++   ++ E G RIE      RP    P            + R  PP   +P
Sbjct: 806  PAPLPAHLNRAAGSSPEAGARIERKESARRPPPSRPMPPAPNCLLSQDFSRPRPPQKALP 865

Query: 141  ASPSPSLSRGRR 176
            A+P P    G R
Sbjct: 866  ANPVPGQRTGPR 877

>SYNPO_MOUSE (Q8CC35) Synaptopodin|
          Length = 929

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 118 SDLRYGQPPLGRAPSILPPSS 56
           S   +G PPL RAP+I+ PSS
Sbjct: 63  SRANHGTPPLSRAPAIIQPSS 83

>AP180_HUMAN (O60641) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein)
          Length = 907

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = -2

Query: 223 PASYDRAMPATEDLITLLPRESDGDGDAGILSAGGSDLRYGQPPLGRAPSILPPSSV 53
           PA++   +P +  L   +P  S     AG  S G     +G PP G    ++P   V
Sbjct: 801 PATWSAGVPPSAPLQGAVPPTSSVPPVAGAPSVGQPGAGFGMPPAGTGMPMMPQQPV 857

>IE18_PRVKA (P33479) Immediate-early protein IE180|
          Length = 1446

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +3

Query: 24  TSASKP*STATEEGGRIEGARPSGGWPYLRSEPPALKIPASPSPS 158
           +S+S   S+++ EG   EG RP  G P  R+ PP    P+ P+P+
Sbjct: 386 SSSSSSSSSSSSEGEEDEGVRP--GAPLARAGPP----PSPPAPA 424

>K1196_HUMAN (Q96KM6) Zinc finger protein KIAA1196|
          Length = 892

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = +3

Query: 9   PRPIPTSASKP*STATEEGGRIEGARPSGGWPYLRSEPPALKIPASPSPSLSRGRRVMRS 188
           P  +  S++   S  T  G    G+RPSGG   L++  PA   P    P  ++ RR  ++
Sbjct: 369 PSSMGQSSAFQLSADTSSGSLSPGSRPSGGMEALKAAGPA--SPPEEDPERTKHRRKQKT 426

>NOEK_RHISN (P55356) Phosphomannomutase (EC 5.4.2.8) (PMM)|
          Length = 474

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 20/47 (42%), Positives = 25/47 (53%)
 Frame = +3

Query: 54  TEEGGRIEGARPSGGWPYLRSEPPALKIPASPSPSLSRGRRVMRSSV 194
           T EGGRI   RPSG  P LR    A   P +    L++G  V+ SS+
Sbjct: 428 TFEGGRILHIRPSGNAPELRCYVEA-DDPDAAEHLLAQGLAVLNSSM 473


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,873,855
Number of Sequences: 219361
Number of extensions: 724136
Number of successful extensions: 2830
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2823
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)