>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence
          Length = 158050

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 264   gcgtggccgcgtgggttgtggac 286
             |||||||||||||||||||||||
Sbjct: 79179 gcgtggccgcgtgggttgtggac 79201

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 264      gcgtggccgcgtgggttgtggac 286
                |||||||||||||||||||||||
Sbjct: 29283452 gcgtggccgcgtgggttgtggac 29283430

>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0060O16
          Length = 164373

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 264   gcgtggccgcgtgggttgtggac 286
             |||||||||||||||||||||||
Sbjct: 80797 gcgtggccgcgtgggttgtggac 80775

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 307     gcctcgtccgcgccgagccgga 328
               ||||||||||||||||||||||
Sbjct: 2747028 gcctcgtccgcgccgagccgga 2747049

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 425    ccgacgtggtcgaccgccgcg 445
              |||||||||||||||||||||
Sbjct: 252596 ccgacgtggtcgaccgccgcg 252616

>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 57      gtgctctgctgccgttgtgc 76
               ||||||||||||||||||||
Sbjct: 2029392 gtgctctgctgccgttgtgc 2029411

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    gcctcgtccgcgccgagccg 326
              ||||||||||||||||||||
Sbjct: 710717 gcctcgtccgcgccgagccg 710736

>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13
          Length = 349564

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   gcctcgtccgcgccgagccg 326
             ||||||||||||||||||||
Sbjct: 24998 gcctcgtccgcgccgagccg 25017

>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             3/14
          Length = 320050

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   gcctcgtccgcgccgagccg 326
             ||||||||||||||||||||
Sbjct: 43516 gcctcgtccgcgccgagccg 43535

>gb|AC099344.4| Homo sapiens BAC clone RP11-427E2 from 2, complete sequence
          Length = 135598

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 371   ctgaggcccgagggtcgtggcctgggat 398
             |||||| ||||||||| |||||||||||
Sbjct: 60922 ctgaggtccgagggtcctggcctgggat 60949

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 108     gccggccatcgcgcccagcg 127
               ||||||||||||||||||||
Sbjct: 4745785 gccggccatcgcgcccagcg 4745766



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 423     gcccgacgtggtcgaccgcc 442
               ||||||||||||||||||||
Sbjct: 3887732 gcccgacgtggtcgaccgcc 3887751

>emb|AL732486.9| Mouse DNA sequence from clone RP23-90B3 on chromosome X, complete
              sequence
          Length = 252977

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    ggcaccagttgctgccacca 162
              ||||||||||||||||||||
Sbjct: 181217 ggcaccagttgctgccacca 181198


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,516,857
Number of Sequences: 3902068
Number of extensions: 2516857
Number of successful extensions: 73657
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73266
Number of HSP's gapped (non-prelim): 391
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)