ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast59c05 |
|---|---|
| Clone Library Name | barley_pub |
>NUHM_ARATH (O22769) NADH-ubiquinone oxidoreductase 24 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) Length = 255 Score = 170 bits (430), Expect = 2e-42 Identities = 75/105 (71%), Positives = 93/105 (88%) Frame = +1 Query: 127 TGYFSRTFSSALNYHIDSPDNNPNMPWEFTKANMEKVNEILSHYPSNYKQSGIIPMLDLA 306 T +R+ S+ALNYH+DSPDN P++PWEF++AN KV EILS+YPSNYKQS +IP+LDLA Sbjct: 21 TSQVTRSLSTALNYHLDSPDNKPDLPWEFSEANQSKVKEILSYYPSNYKQSAVIPLLDLA 80 Query: 307 QQQHGGWVPVAAMDAIAKIVGVAPIRVYEVXTFYSMFNRTKVGKY 441 QQQ+GGW+PV+AM+A+AK++ VAPIRVYEV TFYSMFNR KVGKY Sbjct: 81 QQQNGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRAKVGKY 125
>NUHM_HUMAN (P19404) NADH-ubiquinone oxidoreductase 24 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) Length = 249 Score = 109 bits (273), Expect = 3e-24 Identities = 46/95 (48%), Positives = 74/95 (77%) Frame = +1 Query: 157 ALNYHIDSPDNNPNMPWEFTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPV 336 AL H D+P+NNP+ P++FT N +++ I+ +YP +K + ++P+LDLAQ+Q+ GW+P+ Sbjct: 37 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQN-GWLPI 95 Query: 337 AAMDAIAKIVGVAPIRVYEVXTFYSMFNRTKVGKY 441 +AM+ +A+++ V P+RVYEV TFY+M+NR VGKY Sbjct: 96 SAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKY 130
>NUHM_BOVIN (P04394) NADH-ubiquinone oxidoreductase 24 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Polypeptide II) Length = 249 Score = 109 bits (273), Expect = 3e-24 Identities = 47/95 (49%), Positives = 73/95 (76%) Frame = +1 Query: 157 ALNYHIDSPDNNPNMPWEFTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPV 336 AL H D+P+NNP P++FT N +++ I+ +YP +K + ++P+LDLAQ+Q+G W+P+ Sbjct: 37 ALFVHRDTPENNPETPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPI 95 Query: 337 AAMDAIAKIVGVAPIRVYEVXTFYSMFNRTKVGKY 441 +AM+ +A+I+ V P+RVYEV TFY+M+NR VGKY Sbjct: 96 SAMNKVAEILQVPPMRVYEVATFYTMYNRKPVGKY 130
>NUHM_RAT (P19234) NADH-ubiquinone oxidoreductase 24 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) Length = 248 Score = 109 bits (273), Expect = 3e-24 Identities = 46/95 (48%), Positives = 74/95 (77%) Frame = +1 Query: 157 ALNYHIDSPDNNPNMPWEFTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPV 336 AL H D+P+NNP+ P++FT N E++ I+ +YP ++ + ++P+LDLAQ+Q+ GW+P+ Sbjct: 36 ALFVHRDTPENNPDTPFDFTPENYERIEAIVRNYPEGHRAAAVLPVLDLAQRQN-GWLPI 94 Query: 337 AAMDAIAKIVGVAPIRVYEVXTFYSMFNRTKVGKY 441 +AM+ +A+++ V P+RVYEV TFY+M+NR VGKY Sbjct: 95 SAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKY 129
>NUHM_MOUSE (Q9D6J6) NADH-ubiquinone oxidoreductase 24 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) Length = 248 Score = 108 bits (269), Expect = 8e-24 Identities = 45/95 (47%), Positives = 74/95 (77%) Frame = +1 Query: 157 ALNYHIDSPDNNPNMPWEFTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPV 336 AL H D+P+NNP+ P++FT N +++ I+ +YP ++ + ++P+LDLAQ+Q+G W+P+ Sbjct: 36 ALFVHRDTPENNPDTPFDFTPENYKRIETIVKNYPEGHQAAAVLPVLDLAQRQNG-WLPI 94 Query: 337 AAMDAIAKIVGVAPIRVYEVXTFYSMFNRTKVGKY 441 +AM+ +A+++ V P+RVYEV TFY+M+NR VGKY Sbjct: 95 SAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKY 129
>NUHM_CAEEL (Q20719) NADH-ubiquinone oxidoreductase 24 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) Length = 239 Score = 103 bits (256), Expect = 2e-22 Identities = 47/97 (48%), Positives = 68/97 (70%) Frame = +1 Query: 151 SSALNYHIDSPDNNPNMPWEFTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWV 330 ++ L H D+ +NN N+ ++FT N E++ I+ YP +K +IP+LDLAQ+QHG W+ Sbjct: 24 ATGLMVHRDTKENNLNVKFKFTSENQERIKAIMDIYPEGHKAGALIPLLDLAQRQHG-WL 82 Query: 331 PVAAMDAIAKIVGVAPIRVYEVXTFYSMFNRTKVGKY 441 P++AM +AKI+ V +R YEV TFY+MFNR VGKY Sbjct: 83 PISAMHEVAKILEVPRMRAYEVATFYTMFNRQPVGKY 119
>NUHM_NEUCR (P40915) NADH-ubiquinone oxidoreductase 24 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) Length = 263 Score = 101 bits (251), Expect = 9e-22 Identities = 43/101 (42%), Positives = 74/101 (73%) Frame = +1 Query: 139 SRTFSSALNYHIDSPDNNPNMPWEFTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQH 318 +R S L H ++PDNNP++P++F+ N + + EI+ YP YK++ ++P+LDL Q+QH Sbjct: 39 ARRPSDTLMVHRNTPDNNPDIPFKFSADNEKVIEEIIKRYPPQYKKAAVMPLLDLGQRQH 98 Query: 319 GGWVPVAAMDAIAKIVGVAPIRVYEVXTFYSMFNRTKVGKY 441 G+ ++ M+ +A+++ + P+RVYEV +FY+M+NRT VGK+ Sbjct: 99 -GFCSISVMNEVARLLEMPPMRVYEVASFYTMYNRTPVGKF 138
>NUOE_RICCN (Q92ID9) NADH-quinone oxidoreductase chain E (EC 1.6.99.5) (NADH| dehydrogenase I, chain E) (NDH-1, chain E) Length = 167 Score = 88.6 bits (218), Expect = 6e-18 Identities = 39/77 (50%), Positives = 56/77 (72%) Frame = +1 Query: 211 FTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIRVY 390 F K N+ EI+ YP + K+S I+P+LDLAQ+Q+GGW+PV A++ +A ++ + IR Y Sbjct: 10 FDKKNLNLAEEIIKKYPPHGKRSAILPLLDLAQRQNGGWLPVPAIEYVANMLAMPYIRAY 69 Query: 391 EVXTFYSMFNRTKVGKY 441 EV TFY+MFN +VGKY Sbjct: 70 EVATFYTMFNLKRVGKY 86
>NUOE_RICPR (Q9ZDH5) NADH-quinone oxidoreductase chain E (EC 1.6.99.5) (NADH| dehydrogenase I, chain E) (NDH-1, chain E) Length = 177 Score = 82.0 bits (201), Expect = 6e-16 Identities = 36/82 (43%), Positives = 55/82 (67%) Frame = +1 Query: 196 NMPWEFTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVA 375 N + F K N+ I+ YP K+S I+P+LDLAQ+Q+GGW+ V+A++ +A ++ + Sbjct: 7 NFTFAFDKKNLNLAETIIKKYPPEGKRSAILPLLDLAQRQNGGWLHVSAIEYVANMLEMP 66 Query: 376 PIRVYEVXTFYSMFNRTKVGKY 441 +R YEV TFY+MFN +GKY Sbjct: 67 YMRAYEVATFYTMFNLNPIGKY 88
>NUOE1_RHIME (P56909) NADH-quinone oxidoreductase chain E 1 (EC 1.6.99.5) (NADH| dehydrogenase I, chain E 1) (NDH-1, chain E 1) Length = 275 Score = 61.6 bits (148), Expect = 8e-10 Identities = 32/75 (42%), Positives = 46/75 (61%) Frame = +1 Query: 211 FTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIRVY 390 F+K N + YP +QS +IP+L AQ+Q G WV AA++++A ++G+A IRV Sbjct: 18 FSKENAAWAEATIKKYPEGREQSAVIPLLMRAQEQDG-WVTRAAIESVADMLGMAYIRVL 76 Query: 391 EVXTFYSMFNRTKVG 435 EV TFY+ F VG Sbjct: 77 EVATFYTQFQLQPVG 91
>NQO2_PARDE (P29914) NADH-quinone oxidoreductase chain 2 (EC 1.6.99.5) (NADH| dehydrogenase I, chain 2) (NDH-1, chain 2) Length = 239 Score = 60.1 bits (144), Expect = 2e-09 Identities = 33/77 (42%), Positives = 46/77 (59%) Frame = +1 Query: 205 WEFTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIR 384 +EFT AN+E ++ YP +QS IIP+L AQ+Q GW+ A++ A ++G+ IR Sbjct: 13 FEFTPANLEWARAQMTKYPEGRQQSAIIPVLWRAQEQE-GWLSRPAIEYCADLLGMPYIR 71 Query: 385 VYEVXTFYSMFNRTKVG 435 EV TFY MF VG Sbjct: 72 ALEVATFYFMFQLQPVG 88
>NUHM_SCHPO (O13691) Probable NADH-ubiquinone oxidoreductase 24 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) Length = 162 Score = 57.8 bits (138), Expect = 1e-08 Identities = 25/66 (37%), Positives = 40/66 (60%) Frame = +1 Query: 211 FTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIRVY 390 F N++ IL+ YP ++ + ++P+LDLAQ+QHG W+P AM IA + GV+ V+ Sbjct: 7 FKPENLQLAKAILARYPLRFQSAALVPLLDLAQRQHGTWIPPTAMYEIASLAGVSIDYVH 66 Query: 391 EVXTFY 408 + Y Sbjct: 67 SLILAY 72
>NUOE2_RHIME (P56910) NADH-quinone oxidoreductase chain E 2 (EC 1.6.99.5) (NADH| dehydrogenase I, chain E 2) (NDH-1, chain E 2) Length = 168 Score = 52.4 bits (124), Expect = 5e-07 Identities = 24/71 (33%), Positives = 47/71 (66%) Frame = +1 Query: 229 EKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIRVYEVXTFY 408 E++ + YP ++S I+P L +AQ++HG +P ++ +A+I+GV + VYE+ TFY Sbjct: 5 EEIEAAAARYPD--RRSAIMPALMIAQKEHGH-LPGPVLEEVAQILGVERVWVYELATFY 61 Query: 409 SMFNRTKVGKY 441 ++F+ +G++ Sbjct: 62 TLFHTEPIGRF 72
>NQO2_THET8 (Q56221) NADH-quinone oxidoreductase subunit 2 (EC 1.6.99.5) (NADH| dehydrogenase I chain 2) (NDH-1 subunit 2) Length = 180 Score = 49.3 bits (116), Expect = 4e-06 Identities = 23/69 (33%), Positives = 38/69 (55%) Frame = +1 Query: 235 VNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIRVYEVXTFYSM 414 + E + YP +++ I+P+L QQ+ G W+ ++ IA++VG P V V +FYS Sbjct: 10 LEETFAKYPPEGRRAAIMPLLRRVQQEEG-WIRPERIEEIARLVGTTPTEVMGVASFYSY 68 Query: 415 FNRTKVGKY 441 + GKY Sbjct: 69 YQFVPTGKY 77
>NUOE_SHIFL (P0AFD3) NADH-quinone oxidoreductase chain E (EC 1.6.99.5) (NADH| dehydrogenase I, chain E) (NDH-1, chain E) (NUO5) Length = 166 Score = 45.8 bits (107), Expect = 5e-05 Identities = 27/79 (34%), Positives = 41/79 (51%) Frame = +1 Query: 205 WEFTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIR 384 +E + A E + + HY ++ I L + Q+Q G WVP A+ AIA ++G+ Sbjct: 12 FELSAAEREAIEHEMHHYED--PRAASIEALKIVQKQRG-WVPDGAIHAIADVLGIPASD 68 Query: 385 VYEVXTFYSMFNRTKVGKY 441 V V TFYS R VG++ Sbjct: 69 VEGVATFYSQIFRQPVGRH 87
>NUOE_ECOLI (P0AFD1) NADH-quinone oxidoreductase chain E (EC 1.6.99.5) (NADH| dehydrogenase I, chain E) (NDH-1, chain E) (NUO5) Length = 166 Score = 45.8 bits (107), Expect = 5e-05 Identities = 27/79 (34%), Positives = 41/79 (51%) Frame = +1 Query: 205 WEFTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIR 384 +E + A E + + HY ++ I L + Q+Q G WVP A+ AIA ++G+ Sbjct: 12 FELSAAEREAIEHEMHHYED--PRAASIEALKIVQKQRG-WVPDGAIHAIADVLGIPASD 68 Query: 385 VYEVXTFYSMFNRTKVGKY 441 V V TFYS R VG++ Sbjct: 69 VEGVATFYSQIFRQPVGRH 87
>NUOE_ECOL6 (P0AFD2) NADH-quinone oxidoreductase chain E (EC 1.6.99.5) (NADH| dehydrogenase I, chain E) (NDH-1, chain E) (NUO5) Length = 166 Score = 45.8 bits (107), Expect = 5e-05 Identities = 27/79 (34%), Positives = 41/79 (51%) Frame = +1 Query: 205 WEFTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIR 384 +E + A E + + HY ++ I L + Q+Q G WVP A+ AIA ++G+ Sbjct: 12 FELSAAEREAIEHEMHHYED--PRAASIEALKIVQKQRG-WVPDGAIHAIADVLGIPASD 68 Query: 385 VYEVXTFYSMFNRTKVGKY 441 V V TFYS R VG++ Sbjct: 69 VEGVATFYSQIFRQPVGRH 87
>NUOE_SALTY (P0A1Y8) NADH-quinone oxidoreductase chain E (EC 1.6.99.5) (NADH| dehydrogenase I, chain E) (NDH-1, chain E) Length = 166 Score = 43.5 bits (101), Expect = 2e-04 Identities = 27/79 (34%), Positives = 40/79 (50%) Frame = +1 Query: 205 WEFTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIR 384 +E + A E + HY ++ I L + Q+Q G WVP A+ AIA ++G+ Sbjct: 12 FELSAAEREAIEHEKHHYED--PRAASIEALKIVQKQRG-WVPDGAIYAIADVLGIPASD 68 Query: 385 VYEVXTFYSMFNRTKVGKY 441 V V TFYS R VG++ Sbjct: 69 VEGVATFYSQIFRQPVGRH 87
>NUOE_SALTI (P0A1Y9) NADH-quinone oxidoreductase chain E (EC 1.6.99.5) (NADH| dehydrogenase I, chain E) (NDH-1, chain E) Length = 166 Score = 43.5 bits (101), Expect = 2e-04 Identities = 27/79 (34%), Positives = 40/79 (50%) Frame = +1 Query: 205 WEFTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIR 384 +E + A E + HY ++ I L + Q+Q G WVP A+ AIA ++G+ Sbjct: 12 FELSAAEREAIEHEKHHYED--PRAASIEALKIVQKQRG-WVPDGAIYAIADVLGIPASD 68 Query: 385 VYEVXTFYSMFNRTKVGKY 441 V V TFYS R VG++ Sbjct: 69 VEGVATFYSQIFRQPVGRH 87
>NUOE_MYCTU (P65573) NADH-quinone oxidoreductase chain E (EC 1.6.99.5) (NADH| dehydrogenase I, chain E) (NDH-1, chain E) Length = 252 Score = 37.0 bits (84), Expect = 0.022 Identities = 21/67 (31%), Positives = 35/67 (52%) Frame = +1 Query: 241 EILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIRVYEVXTFYSMFN 420 EI+ YP ++S ++P+L L Q + P A + A +G+ V V +FY+M+ Sbjct: 46 EIIGRYPD--RRSALLPLLHLVQGEDSYLTP-AGLRFCADQLGLTGAEVSAVASFYTMYR 102 Query: 421 RTKVGKY 441 R G+Y Sbjct: 103 RRPTGEY 109
>NUOE_MYCBO (P65574) NADH-quinone oxidoreductase chain E (EC 1.6.99.5) (NADH| dehydrogenase I, chain E) (NDH-1, chain E) Length = 252 Score = 37.0 bits (84), Expect = 0.022 Identities = 21/67 (31%), Positives = 35/67 (52%) Frame = +1 Query: 241 EILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIRVYEVXTFYSMFN 420 EI+ YP ++S ++P+L L Q + P A + A +G+ V V +FY+M+ Sbjct: 46 EIIGRYPD--RRSALLPLLHLVQGEDSYLTP-AGLRFCADQLGLTGAEVSAVASFYTMYR 102 Query: 421 RTKVGKY 441 R G+Y Sbjct: 103 RRPTGEY 109
>NUOE_BUCAI (P57255) NADH-quinone oxidoreductase chain E (EC 1.6.99.5) (NADH| dehydrogenase I, chain E) (NDH-1, chain E) Length = 162 Score = 35.0 bits (79), Expect = 0.082 Identities = 19/43 (44%), Positives = 25/43 (58%) Frame = +1 Query: 310 QQHGGWVPVAAMDAIAKIVGVAPIRVYEVXTFYSMFNRTKVGK 438 Q+ GWV A+ AIA+I+ + P V V TFYS R VG+ Sbjct: 40 QKKRGWVSDQAIYAIAEILHINPSDVEGVATFYSQIFRKPVGR 82
>NUOE_BUCAP (Q8K9Y4) NADH-quinone oxidoreductase chain E (EC 1.6.99.5) (NADH| dehydrogenase I, chain E) (NDH-1, chain E) Length = 168 Score = 34.3 bits (77), Expect = 0.14 Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Frame = +1 Query: 211 FTKANMEKVNEILSH--YPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIR 384 FT E +NEI Y N +S I L + Q++ G WV A+ IA I+ + P Sbjct: 14 FTLTTFE-INEIEKQKKYYEN-SRSVSIEALKIVQKKRG-WVCDQAIIEIANILNLNPSE 70 Query: 385 VYEVXTFYSMFNRTKVGK 438 V V TFYS R VG+ Sbjct: 71 VESVATFYSQIYRQPVGR 88
>NUOE_BUCBP (Q89AU3) NADH-quinone oxidoreductase chain E (EC 1.6.99.5) (NADH| dehydrogenase I, chain E) (NDH-1, chain E) Length = 171 Score = 32.7 bits (73), Expect = 0.41 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Frame = +1 Query: 265 NYK--QSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIRVYEVXTFYSMFNRTKVGK 438 NY+ +S +I +L Q+ +G W+ + +A I+ ++ + E+ TFYS R +G+ Sbjct: 33 NYRTVRSSLIEILKFVQKSYG-WISNELITELACILKISKCDIEEIATFYSQIFRQPIGR 91
>NUOE_AQUAE (O66842) NADH-quinone oxidoreductase chain E (EC 1.6.99.5) (NADH| dehydrogenase I, chain E) (NDH-1, chain E) Length = 160 Score = 32.7 bits (73), Expect = 0.41 Identities = 21/79 (26%), Positives = 40/79 (50%) Frame = +1 Query: 205 WEFTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIR 384 +EF + K+ E ++++P K+ I+ L Q +G ++P ++ +A ++ + Sbjct: 6 FEFPEELKTKLQEHINYFPK--KRQAILLCLHEIQNYYG-YIPPESLKPLADMLELPLNH 62 Query: 385 VYEVXTFYSMFNRTKVGKY 441 V V FY MF+R KY Sbjct: 63 VEGVVAFYDMFDREDKAKY 81
>CITE2_MOUSE (O35740) Cbp/p300-interacting transactivator 2 (MSG-related protein| 1) (MRG-1) Length = 269 Score = 29.3 bits (64), Expect = 4.5 Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 3/32 (9%) Frame = +3 Query: 168 PHRFAGQQPQHAVGVHQGE---YGEGQRNTIS 254 PH QQPQHA GE YG G N S Sbjct: 36 PHHHQQQQPQHAFNALMGEHIHYGAGNMNATS 67
>CITE2_HUMAN (Q99967) Cbp/p300-interacting transactivator 2 (MSG-related protein| 1) (MRG-1) (P35srj) Length = 270 Score = 29.3 bits (64), Expect = 4.5 Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 3/32 (9%) Frame = +3 Query: 168 PHRFAGQQPQHAVGVHQGE---YGEGQRNTIS 254 PH QQPQHA GE YG G N S Sbjct: 36 PHHHQQQQPQHAFNALMGEHIHYGAGNMNATS 67
>RK2_PINTH (O62940) Chloroplast 50S ribosomal protein L2| Length = 276 Score = 28.9 bits (63), Expect = 5.9 Identities = 9/38 (23%), Positives = 21/38 (55%) Frame = -3 Query: 378 RRNSDYFSNSVHCCNWDPSTMLLLCKIKHWNNTRLLVV 265 RRN ++ S + +DP+ +CK+ + N ++ ++ Sbjct: 69 RRNKEHISGEIVTIEYDPNRSAYICKVHYKNGDKMYIL 106
>HOXF_RALEU (P22317) NAD-reducing hydrogenase hoxS alpha subunit (EC 1.12.1.2)| Length = 602 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/70 (25%), Positives = 36/70 (51%) Frame = +1 Query: 232 KVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMDAIAKIVGVAPIRVYEVXTFYS 411 ++ IL Y S+ ++ +I +L Q ++G +P A + + + ++P+ + E +FY Sbjct: 4 RITTILERYRSD--RTRLIDILWDVQHEYGH-IPDAVLPQLGAGLKLSPLDIRETASFYH 60 Query: 412 MFNRTKVGKY 441 F GKY Sbjct: 61 FFLDKPSGKY 70
>NTPB_ENTHR (Q08637) V-type sodium ATP synthase subunit B (EC 3.6.3.15)| (Na(+)-translocating ATPase subunit B) Length = 458 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +1 Query: 184 DNNPN-MPWEFTKANMEKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPV 336 DN P +P ++ N E +N I YP + Q+GI + L G +PV Sbjct: 98 DNGPEILPEKYLDINGEVINPIARDYPDEFIQTGISAIDHLNTLVRGQKLPV 149 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,112,099 Number of Sequences: 219361 Number of extensions: 863858 Number of successful extensions: 2990 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 2901 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2977 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
