ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast59c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475674.1| Oryza sativa (japonica cultivar-group), predic... 289 4e-75
2dbj|AK100226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 4e-75
3dbj|AK099007.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 4e-75
4dbj|AK061566.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 4e-75
5gb|BT016329.1| Zea mays clone Contig162 mRNA sequence 246 5e-62
6gb|AY106442.1| Zea mays PCO078493 mRNA sequence 246 5e-62
7gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome... 151 2e-33
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
10dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
11dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
12emb|AL449363.12| Human DNA sequence from clone CTA-444M12 on chr... 48 0.024
13ref|NM_116492.2| Arabidopsis thaliana NADH dehydrogenase (ubiqui... 46 0.097
14gb|AY052326.1| Arabidopsis thaliana AT4g02580/T10P11_14 mRNA, co... 46 0.097
15emb|BX826545.1|CNS0A3A1 Arabidopsis thaliana Full-length cDNA Co... 46 0.097
16emb|BX826476.1|CNS0A380 Arabidopsis thaliana Full-length cDNA Co... 46 0.097
17gb|BT001140.1| Arabidopsis thaliana At4g02580/T10P11_14 mRNA, co... 46 0.097
18gb|AC002330.1| Arabidopsis thaliana BAC T10P11 from chromosome I... 40 6.0
19gb|AC147231.2| Mus musculus BAC clone RP23-250I21 from chromosom... 40 6.0
20gb|AC126688.4| Mus musculus BAC clone RP23-152P20 from chromosom... 40 6.0
21emb|AL353900.14| Human DNA sequence from clone RP11-202C2 on chr... 40 6.0
22ref|XM_795551.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 6.0
23emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, c... 40 6.0
24emb|AL646093.9| Mouse DNA sequence from clone RP23-55I2 on chrom... 40 6.0
25emb|AL596204.8| Mouse DNA sequence from clone RP23-180B18 on chr... 40 6.0
26emb|CR857523.1| Pongo pygmaeus mRNA; cDNA DKFZp469M1128 (from cl... 40 6.0
27gb|AC101690.7| Mus musculus chromosome 7, clone RP23-218E6, comp... 40 6.0
28dbj|AB168783.1| Macaca fascicularis testis cDNA, clone: QtsA-147... 40 6.0
29dbj|AB179252.1| Macaca fascicularis testis cDNA clone: QtsA-1607... 40 6.0
30gb|AC096627.28| Mus musculus strain C57BL/6J clone rp23-77b23 ma... 40 6.0
31gb|AC084020.17|AC084020 Mus musculus 11 BAC RP23-301I12 (Roswell... 40 6.0
32emb|BX934933.1| Gallus gallus finished cDNA, clone ChEST150i14 40 6.0
33emb|BX932065.1| Gallus gallus finished cDNA, clone ChEST410o12 40 6.0
34gb|AC111009.5| Mus musculus BAC clone RP23-418A13 from 9, comple... 40 6.0 
>ref|XM_475674.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 825

 Score =  289 bits (146), Expect = 4e-75
 Identities = 253/289 (87%)
 Strand = Plus / Plus

                                                                       
Query: 155 cggcgcttaactaccacatcgattcgccggacaacaaccccaacatgccgtgggagttca 214
           ||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 146 cggcgcttaactaccacctcgattcgccggaaaacaaccccgacatgccgtgggagttca 205

                                                                       
Query: 215 ccaaggcgaatatggagaaggtcaacgaaatactatctcattacccaagcaactacaagc 274
           |  |||| || ||| ||||||| || || ||| | ||||| || ||||||||||||||||
Sbjct: 206 cggaggccaacatgaagaaggttaatgagatattgtctcactatccaagcaactacaagc 265

                                                                       
Query: 275 aatctggtattattccaatgcttgatcttgcacagcagcagcatggtggatgggtcccag 334
           | ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 266 agtctggtattattccaatgcttgatcttgcccagcagcagcatggtggatgggtgccag 325

                                                                       
Query: 335 ttgcagcaatggacgctattgctaaaatagtcggagttgcgccgatcagggtctatgaag 394
           ||||||||||| | ||||||||||| || || | |||||| || ||||| || |||||||
Sbjct: 326 ttgcagcaatgaatgctattgctaagatcgttgaagttgcaccaatcagagtatatgaag 385

                                                            
Query: 395 ttgncacattctactcaatgttcaatcggaccaaggtgggaaaatatca 443
           |||  ||||| ||| ||||||| || ||||| |||||||| ||||||||
Sbjct: 386 ttgctacattttacacaatgtttaaccggactaaggtgggtaaatatca 434
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>dbj|AK100226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048E09, full
           insert sequence
          Length = 1120

 Score =  289 bits (146), Expect = 4e-75
 Identities = 253/289 (87%)
 Strand = Plus / Plus

                                                                       
Query: 155 cggcgcttaactaccacatcgattcgccggacaacaaccccaacatgccgtgggagttca 214
           ||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 197 cggcgcttaactaccacctcgattcgccggaaaacaaccccgacatgccgtgggagttca 256

                                                                       
Query: 215 ccaaggcgaatatggagaaggtcaacgaaatactatctcattacccaagcaactacaagc 274
           |  |||| || ||| ||||||| || || ||| | ||||| || ||||||||||||||||
Sbjct: 257 cggaggccaacatgaagaaggttaatgagatattgtctcactatccaagcaactacaagc 316

                                                                       
Query: 275 aatctggtattattccaatgcttgatcttgcacagcagcagcatggtggatgggtcccag 334
           | ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 317 agtctggtattattccaatgcttgatcttgcccagcagcagcatggtggatgggtgccag 376

                                                                       
Query: 335 ttgcagcaatggacgctattgctaaaatagtcggagttgcgccgatcagggtctatgaag 394
           ||||||||||| | ||||||||||| || || | |||||| || ||||| || |||||||
Sbjct: 377 ttgcagcaatgaatgctattgctaagatcgttgaagttgcaccaatcagagtatatgaag 436

                                                            
Query: 395 ttgncacattctactcaatgttcaatcggaccaaggtgggaaaatatca 443
           |||  ||||| ||| ||||||| || ||||| |||||||| ||||||||
Sbjct: 437 ttgctacattttacacaatgtttaaccggactaaggtgggtaaatatca 485
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>dbj|AK099007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114B12, full
           insert sequence
          Length = 1147

 Score =  289 bits (146), Expect = 4e-75
 Identities = 253/289 (87%)
 Strand = Plus / Plus

                                                                       
Query: 155 cggcgcttaactaccacatcgattcgccggacaacaaccccaacatgccgtgggagttca 214
           ||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 199 cggcgcttaactaccacctcgattcgccggaaaacaaccccgacatgccgtgggagttca 258

                                                                       
Query: 215 ccaaggcgaatatggagaaggtcaacgaaatactatctcattacccaagcaactacaagc 274
           |  |||| || ||| ||||||| || || ||| | ||||| || ||||||||||||||||
Sbjct: 259 cggaggccaacatgaagaaggttaatgagatattgtctcactatccaagcaactacaagc 318

                                                                       
Query: 275 aatctggtattattccaatgcttgatcttgcacagcagcagcatggtggatgggtcccag 334
           | ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 319 agtctggtattattccaatgcttgatcttgcccagcagcagcatggtggatgggtgccag 378

                                                                       
Query: 335 ttgcagcaatggacgctattgctaaaatagtcggagttgcgccgatcagggtctatgaag 394
           ||||||||||| | ||||||||||| || || | |||||| || ||||| || |||||||
Sbjct: 379 ttgcagcaatgaatgctattgctaagatcgttgaagttgcaccaatcagagtatatgaag 438

                                                            
Query: 395 ttgncacattctactcaatgttcaatcggaccaaggtgggaaaatatca 443
           |||  ||||| ||| ||||||| || ||||| |||||||| ||||||||
Sbjct: 439 ttgctacattttacacaatgtttaaccggactaaggtgggtaaatatca 487
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>dbj|AK061566.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E10, full
           insert sequence
          Length = 1219

 Score =  289 bits (146), Expect = 4e-75
 Identities = 253/289 (87%)
 Strand = Plus / Plus

                                                                       
Query: 155 cggcgcttaactaccacatcgattcgccggacaacaaccccaacatgccgtgggagttca 214
           ||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 202 cggcgcttaactaccacctcgattcgccggaaaacaaccccgacatgccgtgggagttca 261

                                                                       
Query: 215 ccaaggcgaatatggagaaggtcaacgaaatactatctcattacccaagcaactacaagc 274
           |  |||| || ||| ||||||| || || ||| | ||||| || ||||||||||||||||
Sbjct: 262 cggaggccaacatgaagaaggttaatgagatattgtctcactatccaagcaactacaagc 321

                                                                       
Query: 275 aatctggtattattccaatgcttgatcttgcacagcagcagcatggtggatgggtcccag 334
           | ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 322 agtctggtattattccaatgcttgatcttgcccagcagcagcatggtggatgggtgccag 381

                                                                       
Query: 335 ttgcagcaatggacgctattgctaaaatagtcggagttgcgccgatcagggtctatgaag 394
           ||||||||||| | ||||||||||| || || | |||||| || ||||| || |||||||
Sbjct: 382 ttgcagcaatgaatgctattgctaagatcgttgaagttgcaccaatcagagtatatgaag 441

                                                            
Query: 395 ttgncacattctactcaatgttcaatcggaccaaggtgggaaaatatca 443
           |||  ||||| ||| ||||||| || ||||| |||||||| ||||||||
Sbjct: 442 ttgctacattttacacaatgtttaaccggactaaggtgggtaaatatca 490
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>gb|BT016329.1| Zea mays clone Contig162 mRNA sequence
          Length = 1199

 Score =  246 bits (124), Expect = 5e-62
 Identities = 220/252 (87%)
 Strand = Plus / Plus

                                                                       
Query: 146 ccttctcttcggcgcttaactaccacatcgattcgccggacaacaaccccaacatgccgt 205
           |||||||  |||| |||||||||||| | ||||| ||||| ||||| ||  |||||   |
Sbjct: 213 ccttctccacggctcttaactaccaccttgattccccggagaacaagccggacatgaaat 272

                                                                       
Query: 206 gggagttcaccaaggcgaatatggagaaggtcaacgaaatactatctcattacccaagca 265
           |||||||| |  ||||||||||| |||||||||| || || || ||||| || |||||||
Sbjct: 273 gggagttctcacaggcgaatatgaagaaggtcaatgagattctgtctcactatccaagca 332

                                                                       
Query: 266 actacaagcaatctggtattattccaatgcttgatcttgcacagcagcagcatggtggat 325
           |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 333 actacaagcaatctggtattattccgctgcttgatcttgcacagcagcagcatggtggat 392

                                                                       
Query: 326 gggtcccagttgcagcaatggacgctattgctaaaatagtcggagttgcgccgatcaggg 385
           |||| ||||||||||||||||| |||||||||||||| |||| |||||| || |||||||
Sbjct: 393 gggtgccagttgcagcaatggatgctattgctaaaatcgtcgaagttgcaccaatcaggg 452

                       
Query: 386 tctatgaagttg 397
           | ||||||||||
Sbjct: 453 tttatgaagttg 464
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>gb|AY106442.1| Zea mays PCO078493 mRNA sequence
          Length = 1289

 Score =  246 bits (124), Expect = 5e-62
 Identities = 220/252 (87%)
 Strand = Plus / Plus

                                                                       
Query: 146 ccttctcttcggcgcttaactaccacatcgattcgccggacaacaaccccaacatgccgt 205
           |||||||  |||| |||||||||||| | ||||| ||||| ||||| ||  |||||   |
Sbjct: 221 ccttctccacggctcttaactaccaccttgattccccggagaacaagccggacatgaaat 280

                                                                       
Query: 206 gggagttcaccaaggcgaatatggagaaggtcaacgaaatactatctcattacccaagca 265
           |||||||| |  ||||||||||| |||||||||| || || || ||||| || |||||||
Sbjct: 281 gggagttctcacaggcgaatatgaagaaggtcaatgagattctgtctcactatccaagca 340

                                                                       
Query: 266 actacaagcaatctggtattattccaatgcttgatcttgcacagcagcagcatggtggat 325
           |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 341 actacaagcaatctggtattattccgctgcttgatcttgcacagcagcagcatggtggat 400

                                                                       
Query: 326 gggtcccagttgcagcaatggacgctattgctaaaatagtcggagttgcgccgatcaggg 385
           |||| ||||||||||||||||| |||||||||||||| |||| |||||| || |||||||
Sbjct: 401 gggtgccagttgcagcaatggatgctattgctaaaatcgtcgaagttgcaccaatcaggg 460

                       
Query: 386 tctatgaagttg 397
           | ||||||||||
Sbjct: 461 tttatgaagttg 472
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>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0108E17, complete sequence
          Length = 139829

 Score =  151 bits (76), Expect = 2e-33
 Identities = 91/96 (94%)
 Strand = Plus / Plus

                                                                         
Query: 250   tctcattacccaagcaactacaagcaatctggtattattccaatgcttgatcttgcacag 309
             ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 83985 tctcactatccaagcaactacaagcagtctggtattattccaatgcttgatcttgcccag 84044

                                                 
Query: 310   cagcagcatggtggatgggtcccagttgcagcaatg 345
             |||||||||||||||||||| |||||||||||||||
Sbjct: 84045 cagcagcatggtggatgggtgccagttgcagcaatg 84080



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                         
Query: 173   tcgattcgccggacaacaaccccaacatgccgtgggagttcaccaaggcgaatatggaga 232
             ||||||||||||| ||||||||| |||||||||||||||||||  |||| || ||| |||
Sbjct: 83512 tcgattcgccggaaaacaaccccgacatgccgtgggagttcacggaggccaacatgaaga 83571

                 
Query: 233   aggt 236
             ||||
Sbjct: 83572 aggt 83575
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  151 bits (76), Expect = 2e-33
 Identities = 91/96 (94%)
 Strand = Plus / Plus

                                                                            
Query: 250      tctcattacccaagcaactacaagcaatctggtattattccaatgcttgatcttgcacag 309
                ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 25015132 tctcactatccaagcaactacaagcagtctggtattattccaatgcttgatcttgcccag 25015191

                                                    
Query: 310      cagcagcatggtggatgggtcccagttgcagcaatg 345
                |||||||||||||||||||| |||||||||||||||
Sbjct: 25015192 cagcagcatggtggatgggtgccagttgcagcaatg 25015227



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                            
Query: 173      tcgattcgccggacaacaaccccaacatgccgtgggagttcaccaaggcgaatatggaga 232
                ||||||||||||| ||||||||| |||||||||||||||||||  |||| || ||| |||
Sbjct: 25014659 tcgattcgccggaaaacaaccccgacatgccgtgggagttcacggaggccaacatgaaga 25014718

                    
Query: 233      aggt 236
                ||||
Sbjct: 25014719 aggt 25014722
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                       
Query: 173      tcgattcgccggacaacaaccccaacatgccgtgggagt 211
                ||||||||||||| |||||| || |||||||||||||||
Sbjct: 27523797 tcgattcgccggaaaacaactccgacatgccgtgggagt 27523759
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>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0135D07
          Length = 170587

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 173  tcgattcgccggacaacaaccccaacatgccgtgggagt 211
            ||||||||||||| |||||| || |||||||||||||||
Sbjct: 3466 tcgattcgccggaaaacaactccgacatgccgtgggagt 3428
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>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0657H12
          Length = 142688

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                     
Query: 173    tcgattcgccggacaacaaccccaacatgccgtgggagt 211
              ||||||||||||| |||||| || |||||||||||||||
Sbjct: 115519 tcgattcgccggaaaacaactccgacatgccgtgggagt 115481
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>emb|AL449363.12| Human DNA sequence from clone CTA-444M12 on chromosome 6 Contains the
             5' part of the SLC2A12 gene for solute carrier family 2
             (facilitated glucose transporter) member 12 and a
             high-mobility group (nonhistone chromosomal) protein
             variants I and Y (HMGIY) pseudogene, complete sequence
          Length = 141289

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 313   cagcatggtggatgggtcccagtt 336
             ||||||||||||||||||||||||
Sbjct: 59270 cagcatggtggatgggtcccagtt 59247
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>ref|NM_116492.2| Arabidopsis thaliana NADH dehydrogenase (ubiquinone) AT4G02580
           mRNA, complete cds
          Length = 1110

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 97/122 (79%)
 Strand = Plus / Plus

                                                                       
Query: 298 gatcttgcacagcagcagcatggtggatgggtcccagttgcagcaatggacgctattgct 357
           ||||||||||| |||||| |||| || ||| |||| ||| |||||||| | ||  |||||
Sbjct: 324 gatcttgcacaacagcagaatggaggctggctccctgtttcagcaatgaatgcggttgct 383

                                                                       
Query: 358 aaaatagtcggagttgcgccgatcagggtctatgaagttgncacattctactcaatgttc 417
           ||| |  | | |||||| || ||| | || ||||| ||||  ||||| ||||||||||||
Sbjct: 384 aaagttatagaagttgcccctatccgtgtttatgaggttgcaacattttactcaatgttc 443

             
Query: 418 aa 419
           ||
Sbjct: 444 aa 445
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>gb|AY052326.1| Arabidopsis thaliana AT4g02580/T10P11_14 mRNA, complete cds
          Length = 1003

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 97/122 (79%)
 Strand = Plus / Plus

                                                                       
Query: 298 gatcttgcacagcagcagcatggtggatgggtcccagttgcagcaatggacgctattgct 357
           ||||||||||| |||||| |||| || ||| |||| ||| |||||||| | ||  |||||
Sbjct: 323 gatcttgcacaacagcagaatggaggctggctccctgtttcagcaatgaatgcggttgct 382

                                                                       
Query: 358 aaaatagtcggagttgcgccgatcagggtctatgaagttgncacattctactcaatgttc 417
           ||| |  | | |||||| || ||| | || ||||| ||||  ||||| ||||||||||||
Sbjct: 383 aaagttatagaagttgcccctatccgtgtttatgaggttgcaacattttactcaatgttc 442

             
Query: 418 aa 419
           ||
Sbjct: 443 aa 444
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>emb|BX826545.1|CNS0A3A1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB38ZB10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 954

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 97/122 (79%)
 Strand = Plus / Plus

                                                                       
Query: 298 gatcttgcacagcagcagcatggtggatgggtcccagttgcagcaatggacgctattgct 357
           ||||||||||| |||||| |||| || ||| |||| ||| |||||||| | ||  |||||
Sbjct: 238 gatcttgcacaacagcagaatggaggctggctccctgtttcagcaatgaatgcggttgct 297

                                                                       
Query: 358 aaaatagtcggagttgcgccgatcagggtctatgaagttgncacattctactcaatgttc 417
           ||| |  | | |||||| || ||| | || ||||| ||||  ||||| ||||||||||||
Sbjct: 298 aaagttatagaagttgcccctatccgtgtttatgaggttgcaacattttactcaatgttc 357

             
Query: 418 aa 419
           ||
Sbjct: 358 aa 359
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>emb|BX826476.1|CNS0A380 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB2ZB07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1049

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 97/122 (79%)
 Strand = Plus / Plus

                                                                       
Query: 298 gatcttgcacagcagcagcatggtggatgggtcccagttgcagcaatggacgctattgct 357
           ||||||||||| |||||| |||| || ||| |||| ||| |||||||| | ||  |||||
Sbjct: 285 gatcttgcacaacagcagaatggaggctggctccctgtttcagcaatgaatgcggttgct 344

                                                                       
Query: 358 aaaatagtcggagttgcgccgatcagggtctatgaagttgncacattctactcaatgttc 417
           ||| |  | | |||||| || ||| | || ||||| ||||  ||||| ||||||||||||
Sbjct: 345 aaagttatagaagttgcccctatccgtgtttatgaggttgcaacattttactcaatgttc 404

             
Query: 418 aa 419
           ||
Sbjct: 405 aa 406
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>gb|BT001140.1| Arabidopsis thaliana At4g02580/T10P11_14 mRNA, complete cds
          Length = 768

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 97/122 (79%)
 Strand = Plus / Plus

                                                                       
Query: 298 gatcttgcacagcagcagcatggtggatgggtcccagttgcagcaatggacgctattgct 357
           ||||||||||| |||||| |||| || ||| |||| ||| |||||||| | ||  |||||
Sbjct: 232 gatcttgcacaacagcagaatggaggctggctccctgtttcagcaatgaatgcggttgct 291

                                                                       
Query: 358 aaaatagtcggagttgcgccgatcagggtctatgaagttgncacattctactcaatgttc 417
           ||| |  | | |||||| || ||| | || ||||| ||||  ||||| ||||||||||||
Sbjct: 292 aaagttatagaagttgcccctatccgtgtttatgaggttgcaacattttactcaatgttc 351

             
Query: 418 aa 419
           ||
Sbjct: 352 aa 353
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>gb|AC002330.1| Arabidopsis thaliana BAC T10P11 from chromosome IV, near 15 cM,
             complete sequence
          Length = 113566

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 298   gatcttgcacagcagcagcatggtggatgggtcccagttgcagcaatg 345
             ||||||||||| |||||| |||| || ||| |||| ||| ||||||||
Sbjct: 75455 gatcttgcacaacagcagaatggaggctggctccctgtttcagcaatg 75408
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>gb|AC147231.2| Mus musculus BAC clone RP23-250I21 from chromosome 9, complete sequence
          Length = 215395

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 281    gtattattccaatgcttgatcttg 304
              ||||||||| ||||||||||||||
Sbjct: 122685 gtattattcaaatgcttgatcttg 122662
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>gb|AC126688.4| Mus musculus BAC clone RP23-152P20 from chromosome 7, complete sequence
          Length = 205673

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 307   cagcagcagcatggtggatg 326
             ||||||||||||||||||||
Sbjct: 17546 cagcagcagcatggtggatg 17527
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>emb|AL353900.14| Human DNA sequence from clone RP11-202C2 on chromosome 10 Contains part
             of the gene for VPS10 domain receptor protein SORCS 3
             (SORCS3), complete sequence
          Length = 158737

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   aaccccaacatgccgtggga 209
             ||||||||||||||||||||
Sbjct: 79262 aaccccaacatgccgtggga 79281
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>ref|XM_795551.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC591243 (LOC591243), partial mRNA
          Length = 902

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 305 cacagcagcagcatggtggatggg 328
           |||||||||||| |||||||||||
Sbjct: 724 cacagcagcagcctggtggatggg 747
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>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6
          Length = 194892

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                              
Query: 298    gatcttgcacagcagcagcatggtggatgggtcccagttgcagcaatg 345
              ||||||||||| |||||| |||| || ||| |||| ||| ||||||||
Sbjct: 171290 gatcttgcacaacagcagaatggaggctggctccctgtttcagcaatg 171337
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>emb|AL646093.9| Mouse DNA sequence from clone RP23-55I2 on chromosome 11 Contains the
             Kcnj12 gene for potassium inwardly-rectifying channel
             subfamily J member 12, a ribosomal protein L27a (Rpl27a)
             pseudogene, the Tnfrsf13b gene for tumor necrosis factor
             receptor superfamily member 13b, the Usp22 gene for
             ubiquitin specific protease 22, a ribosomal protein S13
             (Rps13) pseudogene, the Aldh3a1 gene for aldehyde
             dehydrogenase family 3 subfamily A1, the 3' end of one
             variant of the Aldh3a2 gene for aldehyde dehydrogenase
             family 3 subfamily A2 and three CpG islands, complete
             sequence
          Length = 241400

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   gacaacaaccccaacatgcc 203
             ||||||||||||||||||||
Sbjct: 28446 gacaacaaccccaacatgcc 28465
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>emb|AL596204.8| Mouse DNA sequence from clone RP23-180B18 on chromosome 11 Contains the
             Flcn gene for folliculin, the gene for a novel
             Phospholipase D Active site motif-containing protein, two
             novel genes, the gene for Rho interacting protein 3
             (Rhoip3), the gene (possible pseudogene) for a novel
             protein similar to olfactory receptor proteins and two CpG
             islands, complete sequence
          Length = 205606

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   cttgcacagcagcagcatgg 320
             ||||||||||||||||||||
Sbjct: 39394 cttgcacagcagcagcatgg 39375
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>emb|CR857523.1| Pongo pygmaeus mRNA; cDNA DKFZp469M1128 (from clone DKFZp469M1128)
          Length = 2390

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 294  gcttgatcttgcacagcagcagca 317
            ||||||| ||||||||||||||||
Sbjct: 1389 gcttgatgttgcacagcagcagca 1366
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>gb|AC101690.7| Mus musculus chromosome 7, clone RP23-218E6, complete sequence
          Length = 229964

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    cagcagcagcatggtggatg 326
              ||||||||||||||||||||
Sbjct: 216832 cagcagcagcatggtggatg 216813
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>dbj|AB168783.1| Macaca fascicularis testis cDNA, clone: QtsA-14757, similar to
           human solute carrier family 29 (nucleoside
           transporters),member 1 (SLC29A1), mRNA, RefSeq:
           NM_004955.1
          Length = 1701

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 294 gcttgatcttgcacagcagcagca 317
           ||||||| ||||||||||||||||
Sbjct: 830 gcttgatgttgcacagcagcagca 807
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>dbj|AB179252.1| Macaca fascicularis testis cDNA clone: QtsA-16070, similar to human
            sestrin 2 (SESN2), mRNA, RefSeq: NM_031459.3
          Length = 2062

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 301  cttgcacagcagcagcatgg 320
            ||||||||||||||||||||
Sbjct: 1751 cttgcacagcagcagcatgg 1732
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>gb|AC096627.28| Mus musculus strain C57BL/6J clone rp23-77b23 map 11, complete sequence
          Length = 264908

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    gacaacaaccccaacatgcc 203
              ||||||||||||||||||||
Sbjct: 205913 gacaacaaccccaacatgcc 205932
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>gb|AC084020.17|AC084020 Mus musculus 11 BAC RP23-301I12 (Roswell Park Cancer Institute Mouse BAC
              Library) complete sequence
          Length = 147670

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 301    cttgcacagcagcagcatgg 320
              ||||||||||||||||||||
Sbjct: 137938 cttgcacagcagcagcatgg 137957
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>emb|BX934933.1| Gallus gallus finished cDNA, clone ChEST150i14
          Length = 669

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 241 gaaatactatctcattaccc 260
           ||||||||||||||||||||
Sbjct: 442 gaaatactatctcattaccc 461
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>emb|BX932065.1| Gallus gallus finished cDNA, clone ChEST410o12
          Length = 896

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 241 gaaatactatctcattaccc 260
           ||||||||||||||||||||
Sbjct: 705 gaaatactatctcattaccc 724
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>gb|AC111009.5| Mus musculus BAC clone RP23-418A13 from 9, complete sequence
          Length = 194287

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 281   gtattattccaatgcttgatcttg 304
             ||||||||| ||||||||||||||
Sbjct: 57057 gtattattcaaatgcttgatcttg 57034


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,502,815
Number of Sequences: 3902068
Number of extensions: 2502815
Number of successful extensions: 42359
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42272
Number of HSP's gapped (non-prelim): 82
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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