ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast59c04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RL13A_PICMA (O65055) 60S ribosomal protein L13a 237 9e-63
2R13AB_ARATH (Q9LRX8) 60S ribosomal protein L13a-2 235 4e-62
3R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4 234 6e-62
4R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3 232 3e-61
5R13AA_ARATH (Q9SFU1) 60S ribosomal protein L13a-1 231 8e-61
6RL13A_LUPLU (O49885) 60S ribosomal protein L13a 220 1e-57
7RL13A_CYAPA (P93099) 60S ribosomal protein L13a 176 2e-44
8RL13A_BOVIN (Q3SZ90) 60S ribosomal protein L13a 171 8e-43
9RL13A_PONPY (Q5RA38) 60S ribosomal protein L13a 171 1e-42
10RL13A_MACFA (Q4R8Z2) 60S ribosomal protein L13a 171 1e-42
11RL13A_HUMAN (P40429) 60S ribosomal protein L13a (23 kDa highly b... 171 1e-42
12RL13A_PIG (Q95307) 60S ribosomal protein L13a (Fragment) 171 1e-42
13RL13A_RAT (P35427) 60S ribosomal protein L13a 170 2e-42
14RL13A_MOUSE (P19253) 60S ribosomal protein L13a (Transplantation... 169 2e-42
15RL13A_SPOFR (Q962U0) 60S ribosomal protein L13A 167 1e-41
16RL13A_CHOPR (Q8MUR4) 60S ribosomal protein L13A 164 1e-40
17RL13A_SALTR (Q91487) 60S ribosomal protein L13a (Transplantation... 161 6e-40
18RL13A_DROME (Q9VNE9) 60S ribosomal protein L13A 157 1e-38
19RL16B_SCHPO (O42991) 60S ribosomal protein L16-B 155 6e-38
20RL16A_SCHPO (O42848) 60S ribosomal protein L16-A 155 6e-38
21RL16_NEUCR (Q9P720) 60S ribosomal protein L16 154 1e-37
22RL13A_CAEEL (Q27389) 60S ribosomal protein L13a 150 2e-36
23RL16A_YEAST (P26784) 60S ribosomal protein L16-A (L13A) (RP22) 149 3e-36
24RL16B_YEAST (P26785) 60S ribosomal protein L16-B (YL15) (RP23) 149 4e-36
25RL16C_SCHPO (O43004) 60S ribosomal protein L16-C 148 7e-36
26RL13_ARCFU (O29137) 50S ribosomal protein L13P 82 6e-16
27RLSX_METTH (O26146) Fused L13/S9 ribosomal protein [Includes: 50... 81 1e-15
28RL13_PYRAB (Q9V196) 50S ribosomal protein L13P 79 7e-15
29RL13_PYRHO (O59300) 50S ribosomal protein L13P 78 1e-14
30RL13_AERPE (Q9YB50) 50S ribosomal protein L13P 72 6e-13
31RL13_HALMA (P29198) 50S ribosomal protein L13P (Hmal13) 68 9e-12
32RL13_METJA (P54023) 50S ribosomal protein L13P 67 3e-11
33RL13_HALSA (Q9HQJ3) 50S ribosomal protein L13P 64 1e-10
34RL13_SULAC (P39473) 50S ribosomal protein L13P 62 5e-10
35RL13_SULSO (P95991) 50S ribosomal protein L13P 61 1e-09
36RL13_THEMA (Q9X1G5) 50S ribosomal protein L13 48 1e-05
37RK13_SPIOL (P12629) 50S ribosomal protein L13, chloroplast precu... 45 1e-04
38RL13_DEIRA (Q9RXY1) 50S ribosomal protein L13 44 1e-04
39RL13_STRCO (Q53874) 50S ribosomal protein L13 44 1e-04
40RL13_STAS1 (Q49ZD6) 50S ribosomal protein L13 44 1e-04
41RL13_SYNY3 (P73294) 50S ribosomal protein L13 43 3e-04
42RL13_BACSU (P70974) 50S ribosomal protein L13 43 4e-04
43RL13_STAEQ (Q5HM31) 50S ribosomal protein L13 41 0.001
44RL13_MYCLE (P38014) 50S ribosomal protein L13 40 0.002
45RL13_STAES (Q8CRI9) 50S ribosomal protein L13 39 0.004
46RK13_GUITH (O46915) Chloroplast 50S ribosomal protein L13 39 0.004
47RL13_AQUAE (O67722) 50S ribosomal protein L13 39 0.006
48RL13_STAAW (Q7A089) 50S ribosomal protein L13 39 0.008
49RL13_STAAS (Q6G7A3) 50S ribosomal protein L13 39 0.008
50RL13_STAAR (Q6GEL7) 50S ribosomal protein L13 39 0.008
51RL13_STAAN (Q7A473) 50S ribosomal protein L13 39 0.008
52RL13_STAAM (Q99S51) 50S ribosomal protein L13 39 0.008
53RL13_STAAC (Q5HDZ0) 50S ribosomal protein L13 39 0.008
54RL13_CHLTR (O84127) 50S ribosomal protein L13 38 0.010
55RL13_STACA (Q00990) 50S ribosomal protein L13 38 0.010
56RL13_THET8 (P60488) 50S ribosomal protein L13 38 0.013
57RL13_CHLMU (Q9PKR3) 50S ribosomal protein L13 38 0.013
58RM23_YEAST (Q12487) 60S ribosomal protein L23, mitochondrial pre... 38 0.013
59RL13_RHOPA (Q6N651) 50S ribosomal protein L13 (RRP-L13) 37 0.022
60RL13_CHLPN (Q9Z8T7) 50S ribosomal protein L13 37 0.022
61RL13_STAHJ (Q4L881) 50S ribosomal protein L13 37 0.022
62RL13_HELPY (P56038) 50S ribosomal protein L13 37 0.029
63RL13_TREPA (O83988) 50S ribosomal protein L13 37 0.029
64RL13_SHIFL (P0AA15) 50S ribosomal protein L13 36 0.049
65RL13_SALTY (P0AA13) 50S ribosomal protein L13 36 0.049
66RL13_SALTI (P0AA14) 50S ribosomal protein L13 36 0.049
67RL13_ECOLI (P0AA10) 50S ribosomal protein L13 36 0.049
68RL13_ECOL6 (P0AA11) 50S ribosomal protein L13 36 0.049
69RL13_ECO57 (P0AA12) 50S ribosomal protein L13 36 0.049
70RL13_HAEIN (P44387) 50S ribosomal protein L13 35 0.065
71IRX4_CHICK (Q9YGS0) Iroquois-class homeodomain protein IRX-4 (Ir... 33 0.25
72RL13_BUCBP (Q89AE6) 50S ribosomal protein L13 32 0.93
73IF2_METCA (Q609C0) Translation initiation factor IF-2 30 2.1
74RL13_BUCAP (Q8K9F9) 50S ribosomal protein L13 30 2.7
75ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger prote... 29 6.0
76PPARB_MOUSE (P35396) Peroxisome proliferator-activated receptor ... 29 6.0
77PTPA1_CANAL (Q5ADP9) Serine/threonine-protein phosphatase 2A act... 29 6.0
78MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2) 29 6.0
79ACRO_RABIT (P48038) Acrosin precursor (EC 3.4.21.10) [Contains: ... 28 7.9
80CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CR... 28 7.9
81RL13A_SPIOL (P82454) 60S ribosomal protein L13a (Fragment) 28 7.9
82ECT2_MOUSE (Q07139) ECT2 protein (Epithelial cell-transforming s... 28 7.9
83HD_MOUSE (P42859) Huntingtin (Huntington disease protein homolog... 28 7.9
84CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CR... 28 7.9 
>RL13A_PICMA (O65055) 60S ribosomal protein L13a|
          Length = 206

 Score =  237 bits (605), Expect = 9e-63
 Identities = 114/126 (90%), Positives = 121/126 (96%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 247
           MVSGSG+CAK VVVDARHHMLGRLASI+AKELL+GQRVVVVRCEEICMSGGLVRQKMKYL
Sbjct: 1   MVSGSGICAKEVVVDARHHMLGRLASILAKELLHGQRVVVVRCEEICMSGGLVRQKMKYL 60

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 427
           RFLRKRMNTKPSHGPIHFRAP++ILWRTIRGMIPHKT RG AALA L+A+EGVPPPYDR 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSRILWRTIRGMIPHKTKRGAAALATLRAFEGVPPPYDRK 120

Query: 428 KRMVIP 445
           KRMVIP
Sbjct: 121 KRMVIP 126
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>R13AB_ARATH (Q9LRX8) 60S ribosomal protein L13a-2|
          Length = 206

 Score =  235 bits (599), Expect = 4e-62
 Identities = 110/126 (87%), Positives = 119/126 (94%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 247
           MVSGSG+C+KRVVVDARHHM GRLASI+AKELLNGQ VVVVRCEEIC+SGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 427
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG AALARLK +EGVPPPYD+ 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120

Query: 428 KRMVIP 445
           KRMVIP
Sbjct: 121 KRMVIP 126
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>R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4|
          Length = 206

 Score =  234 bits (598), Expect = 6e-62
 Identities = 110/126 (87%), Positives = 119/126 (94%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 247
           MVSGSG+C+KRVVVDARHHMLGRLASI AKELLNGQ+VV+VRCEEIC+SGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 427
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG AALARLK YEGVP PYD+ 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 428 KRMVIP 445
           KRMVIP
Sbjct: 121 KRMVIP 126
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>R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3|
          Length = 206

 Score =  232 bits (592), Expect = 3e-61
 Identities = 109/126 (86%), Positives = 117/126 (92%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 247
           MVSGSG+CAKRVVVD RHHMLGRLAS  AKELLNGQ VVVVRCEEIC+SGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 427
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG AALARLK +EG+PPPYD+ 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120

Query: 428 KRMVIP 445
           KRMVIP
Sbjct: 121 KRMVIP 126
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>R13AA_ARATH (Q9SFU1) 60S ribosomal protein L13a-1|
          Length = 206

 Score =  231 bits (588), Expect = 8e-61
 Identities = 107/126 (84%), Positives = 118/126 (93%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 247
           MVSGSG+CAKRVVVDARHHMLGRLAS+VAK+LLNGQ +VVVRCEEIC+SGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 427
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG  ALARLK +EGVP PYD+ 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 428 KRMVIP 445
           KRMV+P
Sbjct: 121 KRMVVP 126
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>RL13A_LUPLU (O49885) 60S ribosomal protein L13a|
          Length = 205

 Score =  220 bits (561), Expect = 1e-57
 Identities = 106/126 (84%), Positives = 117/126 (92%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 247
           MVSGSG+ AKRVVVDARHHMLGRLASIVAKELLNGQ+VV+VR EEIC+SGGLVRQKMKYL
Sbjct: 1   MVSGSGIAAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICISGGLVRQKMKYL 60

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 427
           RFLRKRMNTKPSHGPIH  AP+KI WRT+RGMIPHKT RGE ALARLK YEG+PPP+D+ 
Sbjct: 61  RFLRKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQ 119

Query: 428 KRMVIP 445
           KR+V+P
Sbjct: 120 KRLVVP 125
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>RL13A_CYAPA (P93099) 60S ribosomal protein L13a|
          Length = 200

 Score =  176 bits (447), Expect = 2e-44
 Identities = 86/117 (73%), Positives = 97/117 (82%)
 Frame = +2

Query: 95  KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 274
           K VVVD R H+LGRLA+ +AKELLNGQRVV VR EEI +SG L R K+K+  FL+KRMNT
Sbjct: 4   KVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNT 63

Query: 275 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
            P  GP HFR+PA+ILWRTIRGMIPHKT RG AAL RLKA+EGVPPPYD+ KRMVIP
Sbjct: 64  NPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIP 120
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>RL13A_BOVIN (Q3SZ90) 60S ribosomal protein L13a|
          Length = 202

 Score =  171 bits (433), Expect = 8e-43
 Identities = 77/115 (66%), Positives = 97/115 (84%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKKKRMVVP 120
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>RL13A_PONPY (Q5RA38) 60S ribosomal protein L13a|
          Length = 202

 Score =  171 bits (432), Expect = 1e-42
 Identities = 77/115 (66%), Positives = 97/115 (84%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTSP 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVP 120
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>RL13A_MACFA (Q4R8Z2) 60S ribosomal protein L13a|
          Length = 202

 Score =  171 bits (432), Expect = 1e-42
 Identities = 77/115 (66%), Positives = 97/115 (84%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVP 120
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>RL13A_HUMAN (P40429) 60S ribosomal protein L13a (23 kDa highly basic protein)|
          Length = 202

 Score =  171 bits (432), Expect = 1e-42
 Identities = 77/115 (66%), Positives = 97/115 (84%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVP 120
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>RL13A_PIG (Q95307) 60S ribosomal protein L13a (Fragment)|
          Length = 137

 Score =  171 bits (432), Expect = 1e-42
 Identities = 77/115 (66%), Positives = 97/115 (84%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 3   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 62

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P
Sbjct: 63  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVP 117
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>RL13A_RAT (P35427) 60S ribosomal protein L13a|
          Length = 202

 Score =  170 bits (430), Expect = 2e-42
 Identities = 77/115 (66%), Positives = 96/115 (83%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRSHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK  +G+PPPYD+ KRMV+P
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVP 120
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>RL13A_MOUSE (P19253) 60S ribosomal protein L13a (Transplantation antigen P198)|
           (Tum-P198 antigen)
          Length = 202

 Score =  169 bits (429), Expect = 2e-42
 Identities = 77/115 (66%), Positives = 96/115 (83%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
           S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK  +G+PPPYD+ KRMV+P
Sbjct: 66  SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVP 120
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>RL13A_SPOFR (Q962U0) 60S ribosomal protein L13A|
          Length = 204

 Score =  167 bits (422), Expect = 1e-41
 Identities = 73/122 (59%), Positives = 97/122 (79%)
 Frame = +2

Query: 80  SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLR 259
           +G   K +V+D R H+LGRLA+++AK LL G +VVVVRCE+I +SG   R K+K++ FLR
Sbjct: 2   TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLR 61

Query: 260 KRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMV 439
           KR N  P+ GP HFRAP+KILW+T+RGMIPHKT RG++AL RL+AY+G PPPYD  +R+V
Sbjct: 62  KRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKSALRRLRAYDGCPPPYDNRRRVV 121

Query: 440 IP 445
           +P
Sbjct: 122 VP 123
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>RL13A_CHOPR (Q8MUR4) 60S ribosomal protein L13A|
          Length = 204

 Score =  164 bits (414), Expect = 1e-40
 Identities = 71/122 (58%), Positives = 96/122 (78%)
 Frame = +2

Query: 80  SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLR 259
           +G   K +V+D R H+LGRLA+++AK LL G +VVVVRCE++ +SG   R K+K++ FLR
Sbjct: 2   TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQLNISGNFFRNKLKFMSFLR 61

Query: 260 KRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMV 439
           KR N  P+ GP HFRAP+KILW+T+RGMIPHKT RG+ AL RL++Y+G PPPYD  +R+V
Sbjct: 62  KRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKDALRRLRSYDGCPPPYDNRRRVV 121

Query: 440 IP 445
           +P
Sbjct: 122 VP 123
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>RL13A_SALTR (Q91487) 60S ribosomal protein L13a (Transplantation antigen P198|
           homolog) (Fragment)
          Length = 189

 Score =  161 bits (408), Expect = 6e-40
 Identities = 74/107 (69%), Positives = 89/107 (83%)
 Frame = +2

Query: 125 MLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFR 304
           +LGRLA+IVA E+L G +VVVVRCE I +SG   R K+KYL FLRKRMNT PS GP HFR
Sbjct: 1   LLGRLAAIVANEVLLGHKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFR 60

Query: 305 APAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
           AP++I WRT+RGM+PHKT RG+AAL RLK ++GVPPPYD+ KRMV+P
Sbjct: 61  APSRIFWRTVRGMLPHKTKRGQAALERLKVFDGVPPPYDKRKRMVVP 107
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>RL13A_DROME (Q9VNE9) 60S ribosomal protein L13A|
          Length = 205

 Score =  157 bits (396), Expect = 1e-38
 Identities = 69/122 (56%), Positives = 96/122 (78%)
 Frame = +2

Query: 80  SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLR 259
           +G+  + VV+D R H+LGRLAS+VAK LL G +V VVRCEE+ +SG   R K+K+L +LR
Sbjct: 2   TGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLR 61

Query: 260 KRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMV 439
           KR N  P+ GP HFRAP++I ++ +RGMIPHKT RG+AALARL+ ++G+P PYD+ +R+V
Sbjct: 62  KRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVV 121

Query: 440 IP 445
           +P
Sbjct: 122 VP 123
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>RL16B_SCHPO (O42991) 60S ribosomal protein L16-B|
          Length = 197

 Score =  155 bits (391), Expect = 6e-38
 Identities = 71/117 (60%), Positives = 93/117 (79%)
 Frame = +2

Query: 95  KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 274
           K VV+DA+ H+LGRLAS+VAK+LL GQ+VVVVRCEE+ +SG   R K+KYL +LRK    
Sbjct: 6   KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65

Query: 275 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
            PS G  HFRAP++I  + +RGM+PHKTARG+AAL  L+A EG+PPP+D+ KR+V+P
Sbjct: 66  NPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVP 122
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>RL16A_SCHPO (O42848) 60S ribosomal protein L16-A|
          Length = 197

 Score =  155 bits (391), Expect = 6e-38
 Identities = 71/117 (60%), Positives = 93/117 (79%)
 Frame = +2

Query: 95  KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 274
           K VV+DA+ H+LGRLAS+VAK+LL GQ+VVVVRCEE+ +SG   R K+KYL +LRK    
Sbjct: 6   KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65

Query: 275 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
            PS G  HFRAP++I  + +RGM+PHKTARG+AAL  L+A EG+PPP+D+ KR+V+P
Sbjct: 66  NPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVP 122
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>RL16_NEUCR (Q9P720) 60S ribosomal protein L16|
          Length = 202

 Score =  154 bits (388), Expect = 1e-37
 Identities = 72/116 (62%), Positives = 92/116 (79%), Gaps = 1/116 (0%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           VV+D + H+LGRLASIVAK+LLNGQ++VVVRCE + +SG   R K+KY  +LRK     P
Sbjct: 8   VVIDGKGHLLGRLASIVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHSYLRKMTRYNP 67

Query: 281 SHG-PIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
           + G P HFRAP++I ++ +RGMIPHKTARG AAL RLK +EGVPPPYD+ K+MV+P
Sbjct: 68  TRGGPFHFRAPSRIFYKAVRGMIPHKTARGAAALERLKVFEGVPPPYDKKKKMVVP 123
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>RL13A_CAEEL (Q27389) 60S ribosomal protein L13a|
          Length = 202

 Score =  150 bits (378), Expect = 2e-36
 Identities = 68/121 (56%), Positives = 89/121 (73%)
 Frame = +2

Query: 83  GVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRK 262
           G+  + +++D ++H+LGRLASIVAK+LL G +VVV+R EEI +SG   R K+KY+ FLRK
Sbjct: 2   GLSNRAIIIDGKNHLLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRK 61

Query: 263 RMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVI 442
           R N  P+ G  H+RAP KI WRT+RGM+PHKT RG  AL  L+AYEGVP  Y +TK +  
Sbjct: 62  RCNINPARGAFHYRAPGKIFWRTVRGMLPHKTNRGNEALKNLRAYEGVPAKYQKTKSLHA 121

Query: 443 P 445
           P
Sbjct: 122 P 122
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>RL16A_YEAST (P26784) 60S ribosomal protein L16-A (L13A) (RP22)|
          Length = 198

 Score =  149 bits (376), Expect = 3e-36
 Identities = 67/115 (58%), Positives = 91/115 (79%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           VV+D + H++GRLAS+VAK+LLNGQ++VVVR EE+ +SG   R K+KY  FLRK      
Sbjct: 6   VVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELNISGEFFRNKLKYHDFLRKATAFNK 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
           + GP HFRAP++I ++ +RGM+ HKTARG+AAL RLK +EG+PPPYD+ KR+V+P
Sbjct: 66  TRGPFHFRAPSRIFYKALRGMVSHKTARGKAALERLKVFEGIPPPYDKKKRVVVP 120
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>RL16B_YEAST (P26785) 60S ribosomal protein L16-B (YL15) (RP23)|
          Length = 197

 Score =  149 bits (375), Expect = 4e-36
 Identities = 68/115 (59%), Positives = 91/115 (79%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           VV+DA+ H+LGRLAS +AK++LNGQ++VVVR E + +SG   R K+KY  FLRK      
Sbjct: 5   VVIDAKDHLLGRLASTIAKQVLNGQKIVVVRAEALNISGEFFRNKLKYHDFLRKATAFNK 64

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
           + GP HFRAP++IL++ IRGM+ HKTARG+AAL RLK +EG+PPPYD+ KR+V+P
Sbjct: 65  TRGPFHFRAPSRILYKAIRGMVSHKTARGKAALERLKIFEGIPPPYDKKKRVVVP 119
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>RL16C_SCHPO (O43004) 60S ribosomal protein L16-C|
          Length = 197

 Score =  148 bits (373), Expect = 7e-36
 Identities = 67/117 (57%), Positives = 89/117 (76%)
 Frame = +2

Query: 95  KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 274
           K V++DA+ H++GRLAS VAK+LL GQ+VVVVRCEE+ +SG   R K+KYL +LRK    
Sbjct: 6   KLVIIDAKGHLMGRLASTVAKQLLAGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65

Query: 275 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
            PS G  HFRAP++I  + +RGM+PHKT RG  AL  L+A EG+PPP+D+ KR+V+P
Sbjct: 66  NPSRGAFHFRAPSRIFTKAVRGMLPHKTTRGNIALKNLQALEGIPPPFDKQKRLVVP 122
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>RL13_ARCFU (O29137) 50S ribosomal protein L13P|
          Length = 156

 Score = 82.0 bits (201), Expect = 6e-16
 Identities = 44/102 (43%), Positives = 63/102 (61%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 283
           V+DA  H+LGRL+S +AK LLNG+R+VVV  E+  ++G    + M + R+  K       
Sbjct: 18  VIDASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGD---KYMVFERYKEKYDRGSKE 74

Query: 284 HGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVP 409
            GP   R P +I  RT+RGM+P K++RG  A  RL+ + GVP
Sbjct: 75  KGPYFPRHPERIFKRTVRGMLPWKSSRGRDAYRRLRVFMGVP 116
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>RLSX_METTH (O26146) Fused L13/S9 ribosomal protein [Includes: 50S ribosomal|
           protein L13P; 30S ribosomal protein S9P]
          Length = 282

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 42/116 (36%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           ++++   H+LGRLAS+V+K+LL G+ V+V+  E+I ++G       KY + + +   + P
Sbjct: 4   MIINGEGHILGRLASVVSKKLLEGEEVIVLNAEKILITGSKEWAYGKYKQRIDRASISNP 63

Query: 281 SH-GPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
              GP + R P  I  RT+RGM+P+K ++G  A   LKAY G+P  +   + + IP
Sbjct: 64  RRMGPKYPRRPDDIFRRTVRGMLPYKKSKGREAFKGLKAYVGIPREFKDEEMVEIP 119
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>RL13_PYRAB (Q9V196) 50S ribosomal protein L13P|
          Length = 142

 Score = 78.6 bits (192), Expect = 7e-15
 Identities = 44/105 (41%), Positives = 61/105 (58%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 283
           +++A   +LGRLAS VAK LL G+ VV+V  E+  ++G       KY +    R  T P 
Sbjct: 3   IINAEGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62

Query: 284 HGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 418
            GP + +   +I+ RTIRGM+P KT RG  A  RLK Y G+P  +
Sbjct: 63  RGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFKRLKVYVGIPKEF 107
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>RL13_PYRHO (O59300) 50S ribosomal protein L13P|
          Length = 142

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 44/105 (41%), Positives = 61/105 (58%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 283
           +++A   +LGRLAS VAK LL G+ VV+V  E+  ++G       KY +    R  T P 
Sbjct: 3   IINADGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62

Query: 284 HGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 418
            GP + +   +I+ RTIRGM+P KT RG  A  RLK Y G+P  +
Sbjct: 63  RGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEF 107
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>RL13_AERPE (Q9YB50) 50S ribosomal protein L13P|
          Length = 155

 Score = 72.0 bits (175), Expect = 6e-13
 Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
 Frame = +2

Query: 92  AKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMN 271
           A+ +VVD    ++GRLAS+VAK LL G RV VV  E+I +SG   R  ++  R     + 
Sbjct: 8   AREIVVDGSGMIMGRLASVVAKLLLAGWRVNVVNAEKIVLSGD-PRMVVESYRTTVLGVK 66

Query: 272 TKPSH--GPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVP 409
           +  SH   P   R P ++    +RGM+P   ARG  ALARL+ Y GVP
Sbjct: 67  SHFSHKWRPKRPRTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVP 114
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>RL13_HALMA (P29198) 50S ribosomal protein L13P (Hmal13)|
          Length = 145

 Score = 68.2 bits (165), Expect = 9e-12
 Identities = 42/107 (39%), Positives = 61/107 (57%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           V+VDAR  ++GR+AS VA++ L+G+ V VV  E   ++G   +   KY     KR++   
Sbjct: 10  VIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKY----EKRVDIGN 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYD 421
            +G  + + P  I  RTIRGM+PHK  RG  A   ++ Y G   PYD
Sbjct: 66  DNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLG--NPYD 110
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>RL13_METJA (P54023) 50S ribosomal protein L13P|
          Length = 137

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 283
           V+DA   +LGRLAS VAK +L G+ +V+V  E + ++G        Y     K+    P 
Sbjct: 3   VIDAEGAILGRLASEVAKRVLRGEEIVIVNAEMVVITGNKDWIIKTYQEEREKKNVANPR 62

Query: 284 H-GPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVP 409
             GP   R P  IL RTIR M+P+K  +G  A  R+K Y G P
Sbjct: 63  RFGPKFPRRPDDILRRTIRKMLPYKKPKGREAFKRVKVYVGNP 105
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>RL13_HALSA (Q9HQJ3) 50S ribosomal protein L13P|
          Length = 145

 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 41/107 (38%), Positives = 55/107 (51%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           VVVDAR  ++GR+AS VA+  L G RV VV  E+  ++G     +       R R N   
Sbjct: 10  VVVDARDCIMGRVASNVAERALAGDRVAVVNAEQAVITG----TEDDVFSTYRTRANLGS 65

Query: 281 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYD 421
             GP + + P  I  R IRGM+P+K   G  AL  ++ Y G P   D
Sbjct: 66  DRGPYYPKRPDGIFKRAIRGMLPYKQDDGREALDSVRVYVGNPMDED 112
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>RL13_SULAC (P39473) 50S ribosomal protein L13P|
          Length = 148

 Score = 62.4 bits (150), Expect = 5e-10
 Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKY-LRFLRKRMNTK 277
           V+VDA + +LGR+++ +AK L +G++V VV  E+  +SG   R    Y L F  K M   
Sbjct: 8   VIVDATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIISGPRSRVLEGYSLLFTVKTMQNP 67

Query: 278 PSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVP 409
              G    R P  I+ RT+RGM+P K   G+     LKAY G+P
Sbjct: 68  YRQGIRRPRNPINIVKRTVRGMLP-KNKLGKQIYRNLKAYIGIP 110
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>RL13_SULSO (P95991) 50S ribosomal protein L13P|
          Length = 149

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 280
           V+++A   +LGR+AS V + L  G++V++V  E+  +SG   R    Y   L  +    P
Sbjct: 10  VIINAEGQILGRMASNVVRLLKEGKKVIIVNGEKAVISGEKNRVIESYKLLLTVKTLFNP 69

Query: 281 SHGPIHF-RAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 445
               I   R+P  I+ RTIRGM+P K+++G   L  +K Y GVP  ++  + +  P
Sbjct: 70  YRNGIRRPRSPINIVKRTIRGMLP-KSSKGRRMLKNVKIYVGVPKEFEGRQFIKFP 124
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>RL13_THEMA (Q9X1G5) 50S ribosomal protein L13|
          Length = 149

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 20/141 (14%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M+    V  K  VVDA   +LGRLA+ +AK L+             G  V+VV  +++ +
Sbjct: 12  MIKPEEVERKWYVVDASGKVLGRLATRIAKILMGKHKPNYTPHVDTGDYVIVVNADKVVL 71

Query: 212 SGGLVRQKMKY--------LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARG 367
           +G  + QK+ Y        L+ L  R   +        + P +++W  ++ M+P K  +G
Sbjct: 72  TGKKLDQKVYYWHSGYPGGLKSLTARQMLE--------KHPERLIWLAVKRMLP-KNRKG 122

Query: 368 EAALARLKAYEGVPPPYDRTK 430
              L RLK Y     P+   K
Sbjct: 123 RKMLKRLKVYASPEHPHQAQK 143
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>RK13_SPIOL (P12629) 50S ribosomal protein L13, chloroplast precursor (CL13)|
          Length = 250

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
 Frame = +2

Query: 95  KRVVVDARHHMLGRLASIVA-----KELLN-------GQRVVVVRCEEICMSGGLVRQKM 238
           K  VVDA   +LGR+AS +A     K L +       G  V+VV  +++ +SG    QK+
Sbjct: 113 KWYVVDATDLILGRMASTIAIHIRGKNLASYTPSVDMGAFVIVVNADKVAVSGKKRTQKL 172

Query: 239 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 418
                 R     + +   +  R P +I+   +RGM+P K   G      LK Y+G   P+
Sbjct: 173 YRRHSGRPGGLKEETFDQLQKRIPERIIEHAVRGMLP-KGRLGRYLFNHLKVYKGAEHPH 231

Query: 419 DRTKRMVIP 445
              + + +P
Sbjct: 232 QAQQPIDLP 240
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>RL13_DEIRA (Q9RXY1) 50S ribosomal protein L13|
          Length = 174

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 14/128 (10%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAK------------ELLNGQRVVVVRCEEICMSGGLVRQKMKY 244
           VVVDA    LGRLA+++A              ++ G  VVV+   ++ ++G  +  K+ Y
Sbjct: 42  VVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFVVVINAAQVALTGKKLDDKV-Y 100

Query: 245 LRF--LRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 418
            R+   +  + T+ +   +  + P +++   + GM+P K  +G A   RLK Y G   P+
Sbjct: 101 TRYTGYQGGLKTETAREALS-KHPERVIEHAVFGMLP-KGRQGRAMHTRLKVYAGETHPH 158

Query: 419 DRTKRMVI 442
              K  V+
Sbjct: 159 SAQKPQVL 166
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>RL13_STRCO (Q53874) 50S ribosomal protein L13|
          Length = 147

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLAS------------IVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 247
           V+DA+  +LGRLA+            I A  +  G  V+++  +++ +SG    QKM Y 
Sbjct: 17  VIDAQDVVLGRLATTAASILRGKHKPIYAPHVDTGDFVIIINADKVHLSGNKRTQKMAYR 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 418
                       +  +  + P K + + I+GM+P K + G   L++LK Y+G   P+
Sbjct: 77  HSGYPGGLRSVRYDELLDKNPEKAVEKAIKGMLP-KNSLGRQMLSKLKVYKGDQHPH 132
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>RL13_STAS1 (Q49ZD6) 50S ribosomal protein L13|
          Length = 145

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 38/129 (29%), Positives = 54/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+V+   +I  
Sbjct: 6   MANESNIERKWYVIDAEGKTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIVINASKIHF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G   R KM Y            S G +    P ++L  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKERDKMYYRHSNHPGGIKSISAGELKANNPERLLENSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133
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>RL13_SYNY3 (P73294) 50S ribosomal protein L13|
          Length = 151

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 12/120 (10%)
 Frame = +2

Query: 95  KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 238
           K  V+DA    LGRLA+ VA  L              G  V+++  E+I ++G    QK+
Sbjct: 15  KWYVIDAEGQRLGRLATEVATILRGKNKPTFTPHMDTGDFVIIINAEKIEVTGRKREQKL 74

Query: 239 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 418
                 R     + +   +  R P +I+   +RGM+P K + G     +LK Y G   P+
Sbjct: 75  YRRHSGRPGGMKEETFEKLQVRLPERIVESAVRGMLP-KNSLGRKLFTKLKVYAGPSHPH 133
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>RL13_BACSU (P70974) 50S ribosomal protein L13|
          Length = 145

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 14/135 (10%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K +VVDA    LGRL+S VA  L              G  V+++  E+I +
Sbjct: 6   MANASTIERKCLVVDAAGKTLGRLSSEVAAILRGKHKPTYTPHVDTGDHVIIINAEKIEL 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRA--PAKILWRTIRGMIPHKTARGEAALAR 385
           +G  +  K+ Y R  +     K S   +  R   P K+L   I+GM+P K + G     +
Sbjct: 66  TGKKLTDKI-YYRHTQHPGGLK-SRTALEMRTNYPEKMLELAIKGMLP-KGSLGRQMFKK 122

Query: 386 LKAYEGVPPPYDRTK 430
           L  Y G   P++  K
Sbjct: 123 LNVYRGSEHPHEAQK 137
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>RL13_STAEQ (Q5HM31) 50S ribosomal protein L13|
          Length = 145

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+++   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIIINASKIEF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G   + KM Y            S G +    P ++L  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKEQDKMYYRHSNHPGGLKSISAGELKRTNPERLLETSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133
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>RL13_MYCLE (P38014) 50S ribosomal protein L13|
          Length = 147

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 247
           V+DA   +LGRLA++ A  L              G  V+V+  +++ +SG  V+ KM Y 
Sbjct: 17  VIDATDVVLGRLAAVAATLLRGKHKPTFAPNVDGGDFVIVINADKVAISGDKVQHKMVYR 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 418
                    K + G +  + P +++ + I GM+P K         +L+ Y G   P+
Sbjct: 77  HSGYPGGLRKRTIGELMQKHPDRVVEKAIVGMLP-KNKLSRQIQRKLRVYAGPDHPH 132
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>RL13_STAES (Q8CRI9) 50S ribosomal protein L13|
          Length = 145

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+++   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIIINASKIEF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G   + KM +            S G +    P ++L  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKEQDKMYHRHSNHPGGLKSISAGELKRTNPERLLETSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133
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>RK13_GUITH (O46915) Chloroplast 50S ribosomal protein L13|
          Length = 143

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
 Frame = +2

Query: 95  KRVVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKM 238
           K  ++DA    LGRLAS  AK L+                +V++  ++I ++G     K 
Sbjct: 15  KWFIIDATDKNLGRLASETAKTLVGKYDPLYAPNVNPKNIIVIINADKIRVTGNKKFDKF 74

Query: 239 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 418
            Y    +    T  +   +  R P +IL + ++G++P K   G      LK Y G   P+
Sbjct: 75  YYRHSGQVGGLTIETFNELQSRLPGRILEKAVKGILP-KGPLGRELFNNLKVYAGSSHPH 133

Query: 419 D 421
           +
Sbjct: 134 E 134
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>RL13_AQUAE (O67722) 50S ribosomal protein L13|
          Length = 144

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 22/131 (16%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYL 247
           VVDA    LGRLAS +AK L              G  V+V+  E+I ++G  + QK  Y 
Sbjct: 17  VVDATGKTLGRLASEIAKILRGKHKPYYQPDVDCGDFVIVINAEKIRVTGKKLEQKKYYW 76

Query: 248 ----------RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAY 397
                     R L+  +  KP           +++   ++ M+P K   G   L +LK Y
Sbjct: 77  HSRYPGGLKERTLKWMLENKPE----------EVIRLAVKRMLP-KNRLGHRMLKKLKVY 125

Query: 398 EGVPPPYDRTK 430
            G   P+   K
Sbjct: 126 RGPEHPHQAQK 136
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>RL13_STAAW (Q7A089) 50S ribosomal protein L13|
          Length = 145

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+V+   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G     K+ Y            + G +    P +++  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133
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>RL13_STAAS (Q6G7A3) 50S ribosomal protein L13|
          Length = 145

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+V+   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G     K+ Y            + G +    P +++  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133
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>RL13_STAAR (Q6GEL7) 50S ribosomal protein L13|
          Length = 145

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+V+   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G     K+ Y            + G +    P +++  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133
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>RL13_STAAN (Q7A473) 50S ribosomal protein L13|
          Length = 145

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+V+   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G     K+ Y            + G +    P +++  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133
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>RL13_STAAM (Q99S51) 50S ribosomal protein L13|
          Length = 145

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+V+   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G     K+ Y            + G +    P +++  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133
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>RL13_STAAC (Q5HDZ0) 50S ribosomal protein L13|
          Length = 145

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+V+   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G     K+ Y            + G +    P +++  +I+GM+P  T  GE    +L 
Sbjct: 66  TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133
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>RL13_CHLTR (O84127) 50S ribosomal protein L13|
          Length = 150

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKM-KY 244
           VV+A    LGRL+S VAK L              G  V+V+  E++ ++G    QK+  Y
Sbjct: 24  VVNAEGKTLGRLSSEVAKILRGKHKVTFTPHVAMGDGVIVINAEKVRLTGAKRAQKVYHY 83

Query: 245 LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                  M   P    I  R PA ++   ++GM+P KT  G   +  L+  +G
Sbjct: 84  YTGFISGMREVPFENMI-ARKPAYVIEHAVKGMLP-KTKLGRRQMKSLRVLKG 134
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>RL13_STACA (Q00990) 50S ribosomal protein L13|
          Length = 145

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L             +G  V+++   +I M
Sbjct: 6   MANESNIERKWYVIDAAGQTLGRLSSEVASILRGKHKATYTPHVDSGDYVIIINAGQIEM 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G     K+ Y            + G +  + P ++L  +I+GM+P  +  GE    +L 
Sbjct: 66  TGKKASDKVYYRHSNYPGGIKSITAGELREKNPERLLEISIKGMLP-SSRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133
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>RL13_THET8 (P60488) 50S ribosomal protein L13|
          Length = 140

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 23/129 (17%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKY 244
           V++DA    LGRLA+ +A  L              G  VVVV  ++I ++G  + QK+ Y
Sbjct: 14  VLIDAEGKTLGRLATKIATLLRGKHRPDWTPNVAMGDFVVVVNADKIRVTGKKLEQKI-Y 72

Query: 245 LRF-----------LRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
            R+           L K + T P           ++L   ++GM+P K   G     RLK
Sbjct: 73  TRYSGYPGGLKKIPLEKMLATHPE----------RVLEHAVKGMLP-KGPLGRRLFKRLK 121

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 122 VYAGPDHPH 130
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>RL13_CHLMU (Q9PKR3) 50S ribosomal protein L13|
          Length = 150

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKM-KY 244
           V++A    LGRL+S VAK L              G  V+V+  E++ ++G    QK+  Y
Sbjct: 24  VINAEGKTLGRLSSEVAKILRGKHKVTFTPHVAMGDGVIVINAEKVRLTGAKRAQKVYHY 83

Query: 245 LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                  M   P    I  R PA ++   ++GM+P KT  G   +  L+  +G
Sbjct: 84  YTGFISGMREVPFENMI-ARKPAYVIEHAVKGMLP-KTKLGRRQMKSLRVVKG 134
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>RM23_YEAST (Q12487) 60S ribosomal protein L23, mitochondrial precursor (YmL23)|
          Length = 163

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
 Frame = +2

Query: 128 LGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYLRFLRK-RM 268
           LGRLAS +A  L+             G  VVV  C++I ++G    QK  +    R  ++
Sbjct: 28  LGRLASAIAITLIGRHKPVYHPSQDCGDYVVVTNCQKIRVTGKKFEQKTYWSHSGRPGQL 87

Query: 269 NTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 418
             +  +  +  +   +IL + + GM+P    R +  L RLK ++G   PY
Sbjct: 88  KLQTMNKVVADKGFGEILKKAVSGMLPKNKLR-KQRLDRLKVFDGSENPY 136
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>RL13_RHOPA (Q6N651) 50S ribosomal protein L13 (RRP-L13)|
          Length = 154

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 28/125 (22%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
 Frame = +2

Query: 86  VCAKRVVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVR 229
           V  K V++DA   ++GRLA++VA  L              G  V+++   ++ ++G    
Sbjct: 11  VTKKWVIIDATGLVVGRLATLVAMRLRGKHLPTYTPHVDCGDNVIIINASKVVLTGRKRD 70

Query: 230 QKMKYLRF-LRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGV 406
            K+ Y        +  + +   +  R P +++ + I  MIP +   G   +  L+ Y G 
Sbjct: 71  NKVYYHHTGFIGGIKERSAKAILEGRFPERVVEKAIERMIP-RGPLGRVQMGNLRVYPGA 129

Query: 407 PPPYD 421
             P++
Sbjct: 130 EHPHE 134
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>RL13_CHLPN (Q9Z8T7) 50S ribosomal protein L13|
          Length = 149

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICM 211
           +V  S       VVDA    LGRL+S VAK L              G  V+V+  E++ +
Sbjct: 11  IVKSSETTKSWYVVDAAGKTLGRLSSEVAKILRGKHKVTYTPHVAMGDGVIVINAEKVRL 70

Query: 212 SGGLVRQKM-KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARL 388
           +G    QK+ +Y       M   P    +  R P  I+   I+GM+P +T  G+  L  L
Sbjct: 71  TGAKKGQKIYRYYTGYISGMREIPFEN-MMARKPNYIIEHAIKGMMP-RTRLGKKQLKSL 128

Query: 389 KAYEG 403
           +  +G
Sbjct: 129 RIVKG 133
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>RL13_STAHJ (Q4L881) 50S ribosomal protein L13|
          Length = 145

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 12/129 (9%)
 Frame = +2

Query: 68  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 211
           M + S +  K  V+DA    LGRL+S VA  L              G  V+++   +I +
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIIINAAKIEL 65

Query: 212 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 391
           +G     K+ Y            + G +    P ++L  +I+GM+P  +  GE    +L 
Sbjct: 66  TGKKESDKIYYRHSNHPGGIKSVTAGELKRNNPERLLETSIKGMLP-SSRLGEKQGKKLF 124

Query: 392 AYEGVPPPY 418
            Y G   P+
Sbjct: 125 VYGGAEHPH 133
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>RL13_HELPY (P56038) 50S ribosomal protein L13|
          Length = 141

 Score = 36.6 bits (83), Expect = 0.029
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 12/118 (10%)
 Frame = +2

Query: 101 VVVDARHHMLGRLASIVAKELLNGQR------------VVVVRCEEICMSGGLVRQKMKY 244
           VV+DA+  + GRL + +A  L    R            VVV+   ++  SG  +  K  +
Sbjct: 15  VVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSGMKLEDKEYF 74

Query: 245 LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 418
                       +   +  +AP K+    +RGM+P KT  G+A + +LK Y     P+
Sbjct: 75  THSGYFGSTKSKTLQEMLEKAPEKLYHLAVRGMLP-KTKLGKAMIKKLKVYRDDKHPH 131
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>RL13_TREPA (O83988) 50S ribosomal protein L13|
          Length = 142

 Score = 36.6 bits (83), Expect = 0.029
 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 12/118 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYL 247
           ++DA    LGR+A+ VA  L              G  VVV+  E++ +SG   + KM Y 
Sbjct: 17  LIDAAGRPLGRVAARVACLLRGKHKASYTPNQEMGDYVVVINAEKVFLSGTKPKDKMYYR 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYD 421
                      S   +  R P + L   ++GM+P K   G   +  +K Y G   P++
Sbjct: 77  HSGYPGGLKSVSFSALVKRRPVEPLRHAVKGMLP-KGPLGRKLIKNVKIYAGSVHPHE 133
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>RL13_SHIFL (P0AA15) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 247
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
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>RL13_SALTY (P0AA13) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 247
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
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>RL13_SALTI (P0AA14) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 247
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
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>RL13_ECOLI (P0AA10) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 247
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
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>RL13_ECOL6 (P0AA11) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 247
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
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>RL13_ECO57 (P0AA12) 50S ribosomal protein L13|
          Length = 142

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 247
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                    + +   +  R P +++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
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>RL13_HAEIN (P44387) 50S ribosomal protein L13|
          Length = 142

 Score = 35.4 bits (80), Expect = 0.065
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 12/112 (10%)
 Frame = +2

Query: 104 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 247
           VVDA    LGRLA+ +A+ L              G  ++V+  +++ ++G     K+ Y 
Sbjct: 17  VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVINADKVAVTGRKETDKLYYW 76

Query: 248 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 403
                    + +   +  R P  ++   ++GM+P K   G A   +LK Y G
Sbjct: 77  HTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
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>IRX4_CHICK (Q9YGS0) Iroquois-class homeodomain protein IRX-4 (Iroquois|
           homeobox protein 4)
          Length = 485

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
 Frame = +1

Query: 283 PRPHPLPRPGQDPLAHHPRYDSAQDRE----GRGRACQAQGVRGCAAAV 417
           P PHPLP  G  P A  P   +A++ E     R R C       C AA+
Sbjct: 279 PHPHPLPGGGPPPRAAEPPAAAAEEEEEEAAERARGCLKPAAEECEAAL 327
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>RL13_BUCBP (Q89AE6) 50S ribosomal protein L13|
          Length = 144

 Score = 31.6 bits (70), Expect = 0.93
 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
 Frame = +2

Query: 107 VDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYLR 250
           +DA   +LGRLA+ +A  L              G  ++V+  + I ++G     K  Y  
Sbjct: 20  IDATGKILGRLATNIASRLRGKHKVEYTPHVDIGDYLIVINAKNIKVTGKKCTDKFYYHH 79

Query: 251 FLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAY 397
                   K +   +  R P +I+   +RGM+P K   G +   +LK Y
Sbjct: 80  TGYVGGLKKIAFKDMLHRYPERIIEIAVRGMLP-KGPLGRSMFKKLKVY 127
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>IF2_METCA (Q609C0) Translation initiation factor IF-2|
          Length = 868

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +1

Query: 280 IPRPHPLPRPGQDPLAHHPRYDSAQDREGRGRACQAQGVRGCAAAVRQDQ 429
           IPRP P PRP   P A  P+ ++ +      R  +A+G +  A   R+D+
Sbjct: 195 IPRPAPEPRPPARPSAGKPKAEAPRAHPAE-RETEARGDKRSAGLSRKDE 243
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>RL13_BUCAP (Q8K9F9) 50S ribosomal protein L13|
          Length = 142

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 12/109 (11%)
 Frame = +2

Query: 107 VDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYLR 250
           VDA + +LGR AS ++  L              G  ++V+   +I ++G     K+ Y  
Sbjct: 18  VDATNKILGRFASAISIRLRGKHKIEYTPHLDTGDYIIVLNASKILVTGQKKINKVYYHH 77

Query: 251 FLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAY 397
                   +     I  + PAK++   ++GM+P K + G +   +LK +
Sbjct: 78  TGYIGGIKQLRFEEIMLKNPAKVIEIAVKGMLP-KGSLGRSMFKKLKVF 125
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>ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger protein of the|
           cerebellum 5)
          Length = 639

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +1

Query: 271 HQAIPRPHPLPRPGQDPLAHHPRYDSA 351
           H   P P P P P Q P  HHP    A
Sbjct: 330 HAPPPAPPPPPAPAQHPHQHHPHLPGA 356
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>PPARB_MOUSE (P35396) Peroxisome proliferator-activated receptor delta|
           (PPAR-delta) (PPAR-beta) (Nuclear hormone receptor 1)
           (NUC1)
          Length = 440

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +2

Query: 191 RCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHF-RAPAKILWRTIRGMIPHKTARG 367
           +C+ IC      R K +Y RF +K +    SH  I F R P     + + G+   +  + 
Sbjct: 109 KCDRICKIQKKNRNKCQYCRF-QKCLALGMSHNAIRFGRMPEAEKRKLVAGLTASEGCQH 167

Query: 368 EAALARLKAY 397
              LA LKA+
Sbjct: 168 NPQLADLKAF 177
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>PTPA1_CANAL (Q5ADP9) Serine/threonine-protein phosphatase 2A activator 1 (EC|
           5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1)
           (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl
           phosphatase activator 1)
          Length = 424

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 222 RPPDMQISSQRTTTTRCPLSSSLATIDARRPSMWWRASTT 103
           +PP+  ++S  TTTT   +SSS + I    P+ W   +TT
Sbjct: 371 KPPETTLNSTTTTTTTTKVSSSTSKIPF-TPAPWANTTTT 409
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>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = -3

Query: 225  TRPPDMQISSQRTTTTRCPLSSSLATID-ARRPSMWWRASTTTRLAHTPEPDTISPLT 55
            T PP     S  TTTT  P + +  T      PS     +TT     TP P T +P+T
Sbjct: 1570 TTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1627



 Score = 28.5 bits (62), Expect = 7.9
 Identities = 18/57 (31%), Positives = 23/57 (40%)
 Frame = -3

Query: 225  TRPPDMQISSQRTTTTRCPLSSSLATIDARRPSMWWRASTTTRLAHTPEPDTISPLT 55
            T PP     S   TT   P +S+        PS     +TT     TP P T +P+T
Sbjct: 1492 TTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1548
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>ACRO_RABIT (P48038) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light|
           chain; Acrosin heavy chain]
          Length = 431

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +1

Query: 283 PRPHPLPRPGQDPLAHHP 336
           P PHP PRP Q P A  P
Sbjct: 335 PHPHPHPRPPQPPAAQAP 352
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>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)|
           (Fragment)
          Length = 353

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 271 HQAIPRPHPLPRPGQDPLAHHP 336
           HQ +P  HP P   Q P AHHP
Sbjct: 126 HQTLPPHHPYPHQHQHP-AHHP 146
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>RL13A_SPIOL (P82454) 60S ribosomal protein L13a (Fragment)|
          Length = 15

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +2

Query: 71  VSGSGVCAKRVVVDA 115
           VSGSG+ AKRVVVDA
Sbjct: 1   VSGSGIMAKRVVVDA 15
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>ECT2_MOUSE (Q07139) ECT2 protein (Epithelial cell-transforming sequence 2|
           oncogene)
          Length = 738

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = -3

Query: 258 RRKRRYFIFWRT--RPPDMQISSQRTTTTRCPLSSSLATIDARRPSMWWRASTTTRLAHT 85
           ++  R F F +T  R   M +SS  ++  R P SS    +         R S+T+ LA  
Sbjct: 660 KKVTRAFSFSKTPKRALRMALSSSHSSEGRSPPSSGKLAVS--------RLSSTSSLAGI 711

Query: 84  PEPDTISPLTWRRRRSY 34
           P P  +S  ++  RRS+
Sbjct: 712 PSPSLVSLPSFFERRSH 728
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>HD_MOUSE (P42859) Huntingtin (Huntington disease protein homolog) (HD|
           protein)
          Length = 3119

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 274 QAIPRPHPLPRPGQDPLAHHPRYDSAQDREGRGRAC 381
           Q  P P PLP P ++PL H P+ + +  ++ R   C
Sbjct: 48  QPPPPPPPLPGPAEEPL-HRPKKELSATKKDRVNHC 82
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>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)|
          Length = 508

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 271 HQAIPRPHPLPRPGQDPLAHHP 336
           HQ +P  HP P   Q P AHHP
Sbjct: 281 HQTLPPHHPYPHQHQHP-AHHP 301


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,392,961
Number of Sequences: 219361
Number of extensions: 968488
Number of successful extensions: 4182
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 3744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4129
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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