ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast59c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GSTU1_ORYSA (O65032) Probable glutathione S-transferase GSTU1 (E... 153 2e-37
2GSTXA_TOBAC (P25317) Probable glutathione S-transferase parA (EC... 119 3e-27
3GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC... 119 4e-27
4GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5.... 118 9e-27
5GSTX1_NICPL (P50471) Probable glutathione S-transferase MSR-1 (E... 104 1e-22
6LGUL_SOYBN (P46417) Lactoylglutathione lyase (EC 4.4.1.5) (Methy... 99 6e-21
7SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precurs... 31 1.9
8MFS14_MAIZE (Q01900) MFS14 protein precursor 31 1.9
9RNH2_IDILO (Q5QZK7) Ribonuclease HII (EC 3.1.26.4) (RNase HII) 30 2.5
10RNH2_HAHCH (Q2SBR2) Ribonuclease HII (EC 3.1.26.4) (RNase HII) 30 2.5
11PANC_ACIAD (Q6F855) Pantoate--beta-alanine ligase (EC 6.3.2.1) (... 29 5.5
12CEFD_NOCLA (Q03046) Isopenicillin N epimerase (EC 5.1.1.17) 29 5.5
13MILK1_HUMAN (Q8N3F8) Molecule interacting with Rab13 (MIRab13) (... 28 9.4
14AROB_BACLD (Q65I29) 3-dehydroquinate synthase (EC 4.2.3.4) 28 9.4

>GSTU1_ORYSA (O65032) Probable glutathione S-transferase GSTU1 (EC 2.5.1.18)|
          Length = 231

 Score =  153 bits (387), Expect = 2e-37
 Identities = 72/126 (57%), Positives = 90/126 (71%), Gaps = 3/126 (2%)
 Frame = +2

Query: 2   FWADYVDKKVYDCGTRLWKVKGEPQAQARAEMLEVLKTLDGALXXXXXXXXXXXXXXXX- 178
           FWADYVD+K+YDCG+RLW++KGEPQA A  EM E+L+TL+  L                 
Sbjct: 106 FWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFV 165

Query: 179 --XXXPFTAWFHSYERYGEFSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLK 352
                PFTAWF+SYER G FS+ EVAP++AAWA+RCG  +SV K L SPEKVYDF+G+LK
Sbjct: 166 DVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLK 225

Query: 353 KRYGIE 370
           K+YG+E
Sbjct: 226 KKYGVE 231



to top

>GSTXA_TOBAC (P25317) Probable glutathione S-transferase parA (EC 2.5.1.18)|
           (Auxin-regulated protein parA) (STR246C protein)
          Length = 220

 Score =  119 bits (299), Expect = 3e-27
 Identities = 55/122 (45%), Positives = 72/122 (59%)
 Frame = +2

Query: 2   FWADYVDKKVYDCGTRLWKVKGEPQAQARAEMLEVLKTLDGALXXXXXXXXXXXXXXXXX 181
           FWADY+DKK+Y  G R+W  KGE Q +A+ E +E+LKTL+G L                 
Sbjct: 98  FWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDNLGFVDVA 157

Query: 182 XXPFTAWFHSYERYGEFSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRY 361
             PFT+WF+SYE    FS+    PK+  WAK C E ESV+KSL  P K+Y F+  LK + 
Sbjct: 158 LVPFTSWFYSYETCANFSIEAECPKLVVWAKTCMESESVSKSLPHPHKIYGFVLELKHKL 217

Query: 362 GI 367
           G+
Sbjct: 218 GL 219



to top

>GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC 2.5.1.18)|
           (Auxin-regulated protein parC)
          Length = 221

 Score =  119 bits (298), Expect = 4e-27
 Identities = 55/123 (44%), Positives = 75/123 (60%)
 Frame = +2

Query: 2   FWADYVDKKVYDCGTRLWKVKGEPQAQARAEMLEVLKTLDGALXXXXXXXXXXXXXXXXX 181
           FWADY+DKK+YD G +LW  KGE Q  A+ + +E LK L+GAL                 
Sbjct: 99  FWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIA 158

Query: 182 XXPFTAWFHSYERYGEFSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRY 361
              F +WF++YE +G FS     PK  AWAKRC +RESVAKSL    KV +F+ +L++++
Sbjct: 159 LIGFYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKF 218

Query: 362 GIE 370
           G+E
Sbjct: 219 GLE 221



to top

>GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5.1.18)|
           (Auxin-induced protein PCNT107)
          Length = 221

 Score =  118 bits (295), Expect = 9e-27
 Identities = 54/123 (43%), Positives = 75/123 (60%)
 Frame = +2

Query: 2   FWADYVDKKVYDCGTRLWKVKGEPQAQARAEMLEVLKTLDGALXXXXXXXXXXXXXXXXX 181
           FWADY+DKK+YD G +LW  KGE Q  A+ + +E LK L+GAL                 
Sbjct: 99  FWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIA 158

Query: 182 XXPFTAWFHSYERYGEFSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRY 361
              + +WF++YE +G FS     PK  AWAKRC +RESVAKSL    KV +F+ +L++++
Sbjct: 159 LIGYYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKF 218

Query: 362 GIE 370
           G+E
Sbjct: 219 GLE 221



to top

>GSTX1_NICPL (P50471) Probable glutathione S-transferase MSR-1 (EC 2.5.1.18)|
           (Auxin-regulated protein MSR-1)
          Length = 219

 Score =  104 bits (260), Expect = 1e-22
 Identities = 49/122 (40%), Positives = 68/122 (55%)
 Frame = +2

Query: 2   FWADYVDKKVYDCGTRLWKVKGEPQAQARAEMLEVLKTLDGALXXXXXXXXXXXXXXXXX 181
           FWA+Y+D K+Y  G R+W  KGE Q +A+ E +E+ KTL+G L                 
Sbjct: 98  FWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDNLGFVDVA 157

Query: 182 XXPFTAWFHSYERYGEFSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRY 361
             PFT+WF+SYE    FS+     K+  W + C E E V+KSL  P K+YDF+  LK + 
Sbjct: 158 LVPFTSWFYSYETCANFSIEAECRKLVVW-QNCMENERVSKSLPHPHKIYDFVLELKHKL 216

Query: 362 GI 367
           G+
Sbjct: 217 GL 218



to top

>LGUL_SOYBN (P46417) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)|
           (Aldoketomutase) (Glyoxalase I)
          Length = 219

 Score = 99.0 bits (245), Expect = 6e-21
 Identities = 44/118 (37%), Positives = 65/118 (55%)
 Frame = +2

Query: 2   FWADYVDKKVYDCGTRLWKVKGEPQAQARAEMLEVLKTLDGALXXXXXXXXXXXXXXXXX 181
           FW DY+DKK+YD   ++W  KGE   + + E++ + K L+  L                 
Sbjct: 97  FWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLC 156

Query: 182 XXPFTAWFHSYERYGEFSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKK 355
              F++WF++YE YG F + E  PK+ AW KRC ERE+V+ +L   +KVY  I  L+K
Sbjct: 157 LITFSSWFYTYETYGNFKMEEECPKLMAWVKRCMERETVSNTLPDAKKVYGLIVELQK 214



to top

>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II) (SRECRP-1)
          Length = 866

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 25/80 (31%), Positives = 31/80 (38%)
 Frame = -3

Query: 297 TLSRSPHRLAHAAILGATSARLNSPYLS*LWNHAVKGAKAASTNPNLSPPKKGLSPSAPS 118
           +LS SP R        AT  +++       W H    A AA   P+  PP    +PS   
Sbjct: 644 SLSPSPERRKPPPPDPATKPKVS-------WIHGKHSAAAAGRAPSPPPPGSEAAPSPSK 696

Query: 117 RVLRTSSISARACACGSPLT 58
           R    S  SA     GSP T
Sbjct: 697 RKRTPSDKSAHTVEHGSPRT 716



to top

>MFS14_MAIZE (Q01900) MFS14 protein precursor|
          Length = 126

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 26/94 (27%), Positives = 39/94 (41%)
 Frame = -3

Query: 468 GHQIAPYXYL*LPSGRPAGRPACACMAVRRRAYSMPYLFLSRPMKS*TFSGE*RLLATLS 289
           G    P   L  P  RPA  PA A   +R RAY +P    +R   + T +    +  +  
Sbjct: 23  GGGTGPSSVLRAPGRRPAAVPAAAERLLRCRAYLVP----ARRTPARTAAALSAVCTSAP 78

Query: 288 RSPHRLAHAAILGATSARLNSPYLS*LWNHAVKG 187
            +P   + A   GATS +  +P  +  W+    G
Sbjct: 79  AAPWASSTACPAGATSPKPTAPLEAGTWHACCNG 112



to top

>RNH2_IDILO (Q5QZK7) Ribonuclease HII (EC 3.1.26.4) (RNase HII)|
          Length = 187

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -2

Query: 199 CGEGREG-GVDEPELVAAEEGLVPERAVEGLEDLQHLGARLRLRLSLDLPE 50
           CG    G G     +VAA   L P+  +EGL D + L  + R +LSL++ E
Sbjct: 3   CGTDEAGRGPIAGPVVAAAVILDPDNPIEGLNDSKKLSEKKREKLSLEIKE 53



to top

>RNH2_HAHCH (Q2SBR2) Ribonuclease HII (EC 3.1.26.4) (RNase HII)|
          Length = 204

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 20/56 (35%), Positives = 29/56 (51%)
 Frame = -2

Query: 217 LVAVEPCGEGREGGVDEPELVAAEEGLVPERAVEGLEDLQHLGARLRLRLSLDLPE 50
           +  V+  G G   G     +VAA   L PE+ +EGL D + L  R R+ LS ++ E
Sbjct: 19  VAGVDEVGRGPLAG----PVVAAAVILNPEKPIEGLNDSKKLSHRQRVALSQEIRE 70



to top

>PANC_ACIAD (Q6F855) Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate|
           synthetase) (Pantoate-activating enzyme)
          Length = 281

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -2

Query: 253 GRHLRQAELAVPLVAVEPCGEGREGGVDEPELVAAE--EGLVPERAVEGLEDLQHLGARL 80
           G+H R   ++V  +  + CG+ R G  D   +V  +    + P  A  G +D Q L    
Sbjct: 100 GKHPRLTNISVADITDDLCGQSRPGHFDGVAVVVTKLFNIVQPNVAFFGQKDYQQLAVIR 159

Query: 79  RLRLSLDLP 53
           +L   L+LP
Sbjct: 160 QLVQDLNLP 168



to top

>CEFD_NOCLA (Q03046) Isopenicillin N epimerase (EC 5.1.1.17)|
          Length = 398

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = -3

Query: 420 PAGRPACACMAVRRRAYSMPYLFLSRPMKS*TFSGE*RLLATLSRSPHRLAHAA-ILGAT 244
           P  RP    + VR R  + P  FLSR +    ++   RL   L   P RLA A  + GA 
Sbjct: 29  PLPRPVFDRVTVRARMAAGPMDFLSRQLPPLLWTARERLAGYLGARPERLAFATNVTGAV 88

Query: 243 SARLNS--PYLS 214
           +   +S  P+L+
Sbjct: 89  NLVASSVQPHLA 100



to top

>MILK1_HUMAN (Q8N3F8) Molecule interacting with Rab13 (MIRab13) (MICAL-like|
           protein 1)
          Length = 863

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 222 YLS*LWNHAVKGAKAASTNPNLSPPKKGLSPSAPSRVLRT 103
           Y+S  +NH     +A      +SPP+KGL+P +P  V  T
Sbjct: 99  YVSQYYNHFCSPGQAG-----VSPPRKGLAPCSPPSVAPT 133



to top

>AROB_BACLD (Q65I29) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 362

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 254 KIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRYGI 367
           KIAAW K  G  ESV + + +   +Y  +   K R GI
Sbjct: 290 KIAAWLKNLGYPESVKREVSTEALIYRMMNDKKTRGGI 327


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,844,362
Number of Sequences: 219361
Number of extensions: 879661
Number of successful extensions: 3238
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3225
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top