| Clone Name | bast59c01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SPEN_DROME (Q8SX83) Protein split ends | 30 | 3.8 | 2 | NETA_DROME (Q24567) Netrin-A precursor | 28 | 8.6 | 3 | FOXF2_HUMAN (Q12947) Forkhead box protein F2 (Forkhead-related p... | 28 | 8.6 |
|---|
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 29.6 bits (65), Expect = 3.8 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = -3 Query: 81 AMCLATGGGPAVLGEGTENKQGSGPG 4 A C A G G +G GT GSGPG Sbjct: 151 AACTAGGSGSGAIGTGTGGLVGSGPG 176
>NETA_DROME (Q24567) Netrin-A precursor| Length = 726 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -1 Query: 383 HAARSCLPHGGNSGCDSPVELSSNLRSSG 297 H R+C+P N+ D+PV SS SSG Sbjct: 45 HEPRACIPDFVNAAYDAPVVASSTCGSSG 73
>FOXF2_HUMAN (Q12947) Forkhead box protein F2 (Forkhead-related protein FKHL6)| (Forkhead-related transcription factor 2) (FREAC-2) (Forkhead-related activator 2) Length = 444 Score = 28.5 bits (62), Expect = 8.6 Identities = 28/89 (31%), Positives = 34/89 (38%), Gaps = 10/89 (11%) Frame = -3 Query: 246 GGPEAP----SATVAGXXXXXXXSEPDA*LAMSASMDGRLARSAESLSRP------SSWM 97 G P AP + V G S P A A +A+ + S+ S S SS Sbjct: 6 GPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNS 65 Query: 96 RRAARAMCLATGGGPAVLGEGTENKQGSG 10 A A C + GGG A G G K SG Sbjct: 66 ASAPSAACKSAGGGGAGAGSGGAKKASSG 94 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,114,688 Number of Sequences: 219361 Number of extensions: 877666 Number of successful extensions: 2907 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2752 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2902 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)