| Clone Name | bast59b12 |
|---|---|
| Clone Library Name | barley_pub |
>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 277 Score = 66.2 bits (160), Expect = 3e-11 Identities = 35/94 (37%), Positives = 43/94 (45%) Frame = +1 Query: 151 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 330 LY DIGKK RDLL +DY +KNE+I +L TQ+K K T Sbjct: 7 LYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLT 66 Query: 331 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFP 432 VDVKA E PGLK +++L P Sbjct: 67 VDVKANSESDLLTTITVDEFGTPGLKSIINLVVP 100
>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 273 Score = 65.5 bits (158), Expect = 6e-11 Identities = 37/94 (39%), Positives = 44/94 (46%) Frame = +1 Query: 151 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 330 LY +IGKKARDLL RDY KK + I ++Q+Q+K KN T Sbjct: 5 LYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNIT 64 Query: 331 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFP 432 VDVKA EL PGLK +LS P Sbjct: 65 VDVKANSDSNVVTTVTVDEL-TPGLKSILSFAVP 97
>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 Score = 65.5 bits (158), Expect = 6e-11 Identities = 34/94 (36%), Positives = 44/94 (46%) Frame = +1 Query: 151 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 330 LY+ IGKKA+DLL RDY KK + + ++Q+Q+K KN T Sbjct: 6 LYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNIT 65 Query: 331 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFP 432 VDVKA +L PGLK +LS P Sbjct: 66 VDVKANSASNVITTITADDLAAPGLKTILSFAVP 99
>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) Length = 275 Score = 61.6 bits (148), Expect = 8e-10 Identities = 36/94 (38%), Positives = 41/94 (43%) Frame = +1 Query: 151 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 330 LY+DIGKKARDLL RDY KK E L+D+ TQ+K KN T Sbjct: 6 LYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNIT 65 Query: 331 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFP 432 DVK E PGLK + S P Sbjct: 66 TDVKVDTNSNVYTTITVDEPA-PGLKTIFSFVVP 98
>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 275 Score = 60.1 bits (144), Expect = 2e-09 Identities = 34/94 (36%), Positives = 40/94 (42%) Frame = +1 Query: 151 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 330 LY DIGKKARDLL +DY KK E L D+ TQ+K KN T Sbjct: 6 LYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNIT 65 Query: 331 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFP 432 D+K E PG+K +LS P Sbjct: 66 TDIKVDTNSNLFTTITVNEPA-PGVKAILSFKVP 98
>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) Length = 275 Score = 58.2 bits (139), Expect = 9e-09 Identities = 33/94 (35%), Positives = 41/94 (43%) Frame = +1 Query: 151 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 330 LY +IGKKARDLL +DY KK + L+D+ TQ+K KN T Sbjct: 6 LYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVT 65 Query: 331 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFP 432 D+K E PGLK +LS P Sbjct: 66 TDIKVDTNSNLFTTITVDE-AAPGLKTILSFRVP 98
>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2| (Voltage-dependent anion-selective channel protein 2) (VDAC 2) Length = 273 Score = 56.2 bits (134), Expect = 3e-08 Identities = 33/94 (35%), Positives = 37/94 (39%) Frame = +1 Query: 151 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 330 LY +IGKKARDLL RDY K L D+ TQVK NFT Sbjct: 6 LYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFT 65 Query: 331 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFP 432 DVK E PGLK ++ P Sbjct: 66 ADVKVSTDSSLLTTLTFDEPA-PGLKVIVQAKLP 98
>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 275 Score = 49.7 bits (117), Expect = 3e-06 Identities = 28/94 (29%), Positives = 38/94 (40%) Frame = +1 Query: 151 LYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 330 LY +IGKKARDLL +D+ KK + +L D+ Q + KN T Sbjct: 6 LYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNIT 65 Query: 331 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFP 432 D+K E PGL+ + S P Sbjct: 66 TDLKVCTDSTFLITATVDE-AAPGLRSIFSFKVP 98
>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit| (Voltage-gated calcium channel alpha subunit Cav3.2) (Low-voltage-activated calcium channel alpha1 3.2 subunit) Length = 2353 Score = 29.6 bits (65), Expect = 3.5 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Frame = +3 Query: 174 GQRSPQQGLHHGPEVHL-YHHRRQRSHNY*FKHKEK*SYLERP-PDPG 311 G R + G H HL YHH H+Y F H RP P+PG Sbjct: 501 GHRQRRAGRHTASVHHLVYHHHHHHHHHYHFSHGSP----RRPGPEPG 544
>SNPC1_MOUSE (Q8K0S9) snRNA-activating protein complex subunit 1 (SNAPc subunit| 1) (snRNA-activating protein complex 43 kDa subunit) (SNAPc 43 kDa subunit) (Small nuclear RNA-activating complex polypeptide 1) Length = 389 Score = 28.5 bits (62), Expect = 7.7 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = -1 Query: 437 PIGKGR-ERTPFKPGLHSSGIVIVVTTLESEVAFTSTVKFLIFTWVWRSLKIASFF 273 P G G E PGL + TL S +V+F FT +WRS+K A+ F Sbjct: 11 PTGAGTVEGVGIPPGLQTD-----YETLLSRFQEMDSVRFEDFTELWRSMKFATIF 61 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,957,818 Number of Sequences: 219361 Number of extensions: 479580 Number of successful extensions: 1336 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1232 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1308 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)