ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast59b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RL31_GLOVI (Q7ND16) 50S ribosomal protein L31 28 6.7
2LATS1_MOUSE (Q8BYR2) Serine/threonine-protein kinase LATS1 (EC 2... 28 6.7

>RL31_GLOVI (Q7ND16) 50S ribosomal protein L31|
          Length = 74

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -1

Query: 277 RRTEPRLPCGCGA-WQRRSPRPDLTATSARPPCCP 176
           R  E R+ CGCGA ++ RS +P +T       C P
Sbjct: 9   RYEEARIVCGCGAIYETRSTKPGVTNVEICANCHP 43



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>LATS1_MOUSE (Q8BYR2) Serine/threonine-protein kinase LATS1 (EC 2.7.11.1) (Large|
           tumor suppressor homolog 1) (WARTS protein kinase)
          Length = 1129

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -1

Query: 295 SMEMSLRRTEPRLPCGCGAWQRRSPRPDLTATSARPP 185
           +ME  + R  P  P   GAWQ   P P LT +   PP
Sbjct: 280 NMEYVISRISPVPP---GAWQEGYPPPPLTTSPMNPP 313


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,320,437
Number of Sequences: 219361
Number of extensions: 267329
Number of successful extensions: 989
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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