ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast59b05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 85.7 bits (43), Expect = 1e-13 Identities = 190/235 (80%), Gaps = 18/235 (7%) Strand = Plus / Minus Query: 73 gagagatgaggaaggcg---gccgcggcctcgcgctacgcctcctacgacgactccccgt 129 ||||||||||||||||| |||||||| |||||||||||||||| ||||||| |||| Sbjct: 30653507 gagagatgaggaaggcgaccgccgcggcgtcgcgctacgcctcct---acgactcgccgt 30653451 Query: 130 cgccctccccgtccccgcgccgcgccgcggccgcgtcagggacgccggggcagcacgggg 189 |||| |||||||| ||||| |||||| | |||| | | ||||||||| | ||||| Sbjct: 30653450 cgccgtccccgtctccgcgacgcgcc---ggcgcggcggcgacgccggg---gtacggga 30653397 Query: 190 gccgggcgctggtcgcggtcagatccggccgcggcgacctgcgctgccaggcgccgcagc 249 |||| |||||||| ||| ||||||||||| |||||||||| || |||| |||| Sbjct: 30653396 gccgcgcgctggtgccggccagatccggcc---gcgacctgcgtgccccggcggcgca-- 30653342 Query: 250 cgcacggcaacctgggctctgtcctccggaggctcatctccatggagaagaagcc 304 |||||| ||||| || || || ||||| ||||||||||||||||| |||||||| Sbjct: 30653341 -gcacgggaacctcgggtccgtgctccgtaggctcatctccatggacaagaagcc 30653288 Score = 69.9 bits (35), Expect = 6e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 375 aagctgccggggctgtcgcggaagctgttccagaa 409 ||||||||||||||||||||||||||||||||||| Sbjct: 30653220 aagctgccggggctgtcgcggaagctgttccagaa 30653186 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 cgtccccgcgccgcgccgcggccg 162 ||||||| |||||||||||||||| Sbjct: 30454268 cgtccccccgccgcgccgcggccg 30454291 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 ccgtccccgcgccgcgccgc 157 |||||||||||||||||||| Sbjct: 6305642 ccgtccccgcgccgcgccgc 6305661
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 85.7 bits (43), Expect = 1e-13 Identities = 190/235 (80%), Gaps = 18/235 (7%) Strand = Plus / Plus Query: 73 gagagatgaggaaggcg---gccgcggcctcgcgctacgcctcctacgacgactccccgt 129 ||||||||||||||||| |||||||| |||||||||||||||| ||||||| |||| Sbjct: 108885 gagagatgaggaaggcgaccgccgcggcgtcgcgctacgcctcct---acgactcgccgt 108941 Query: 130 cgccctccccgtccccgcgccgcgccgcggccgcgtcagggacgccggggcagcacgggg 189 |||| |||||||| ||||| |||||| | |||| | | ||||||||| | ||||| Sbjct: 108942 cgccgtccccgtctccgcgacgcgcc---ggcgcggcggcgacgccggg---gtacggga 108995 Query: 190 gccgggcgctggtcgcggtcagatccggccgcggcgacctgcgctgccaggcgccgcagc 249 |||| |||||||| ||| ||||||||||| |||||||||| || |||| |||| Sbjct: 108996 gccgcgcgctggtgccggccagatccggcc---gcgacctgcgtgccccggcggcgca-- 109050 Query: 250 cgcacggcaacctgggctctgtcctccggaggctcatctccatggagaagaagcc 304 |||||| ||||| || || || ||||| ||||||||||||||||| |||||||| Sbjct: 109051 -gcacgggaacctcgggtccgtgctccgtaggctcatctccatggacaagaagcc 109104 Score = 69.9 bits (35), Expect = 6e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 375 aagctgccggggctgtcgcggaagctgttccagaa 409 ||||||||||||||||||||||||||||||||||| Sbjct: 109172 aagctgccggggctgtcgcggaagctgttccagaa 109206
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 85.7 bits (43), Expect = 1e-13 Identities = 190/235 (80%), Gaps = 18/235 (7%) Strand = Plus / Minus Query: 73 gagagatgaggaaggcg---gccgcggcctcgcgctacgcctcctacgacgactccccgt 129 ||||||||||||||||| |||||||| |||||||||||||||| ||||||| |||| Sbjct: 30744929 gagagatgaggaaggcgaccgccgcggcgtcgcgctacgcctcct---acgactcgccgt 30744873 Query: 130 cgccctccccgtccccgcgccgcgccgcggccgcgtcagggacgccggggcagcacgggg 189 |||| |||||||| ||||| |||||| | |||| | | ||||||||| | ||||| Sbjct: 30744872 cgccgtccccgtctccgcgacgcgcc---ggcgcggcggcgacgccggg---gtacggga 30744819 Query: 190 gccgggcgctggtcgcggtcagatccggccgcggcgacctgcgctgccaggcgccgcagc 249 |||| |||||||| ||| ||||||||||| |||||||||| || |||| |||| Sbjct: 30744818 gccgcgcgctggtgccggccagatccggcc---gcgacctgcgtgccccggcggcgca-- 30744764 Query: 250 cgcacggcaacctgggctctgtcctccggaggctcatctccatggagaagaagcc 304 |||||| ||||| || || || ||||| ||||||||||||||||| |||||||| Sbjct: 30744763 -gcacgggaacctcgggtccgtgctccgtaggctcatctccatggacaagaagcc 30744710 Score = 69.9 bits (35), Expect = 6e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 375 aagctgccggggctgtcgcggaagctgttccagaa 409 ||||||||||||||||||||||||||||||||||| Sbjct: 30744642 aagctgccggggctgtcgcggaagctgttccagaa 30744608 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 cgtccccgcgccgcgccgcggccg 162 ||||||| |||||||||||||||| Sbjct: 30545690 cgtccccccgccgcgccgcggccg 30545713 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 ccgtccccgcgccgcgccgc 157 |||||||||||||||||||| Sbjct: 6304855 ccgtccccgcgccgcgccgc 6304874
>ref|XM_469770.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1041 Score = 75.8 bits (38), Expect = 1e-10 Identities = 185/230 (80%), Gaps = 18/230 (7%) Strand = Plus / Plus Query: 78 atgaggaaggcg---gccgcggcctcgcgctacgcctcctacgacgactccccgtcgccc 134 |||||||||||| |||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 1 atgaggaaggcgaccgccgcggcgtcgcgctacgcctcct---acgactcgccgtcgccg 57 Query: 135 tccccgtccccgcgccgcgccgcggccgcgtcagggacgccggggcagcacgggggccgg 194 |||||||| ||||| |||||| | |||| | | ||||||||| | ||||| |||| Sbjct: 58 tccccgtctccgcgacgcgcc---ggcgcggcggcgacgccggg---gtacgggagccgc 111 Query: 195 gcgctggtcgcggtcagatccggccgcggcgacctgcgctgccaggcgccgcagccgcac 254 |||||||| ||| ||||||||||| |||||||||| || |||| |||| |||| Sbjct: 112 gcgctggtgccggccagatccggcc---gcgacctgcgtgccccggcggcgca---gcac 165 Query: 255 ggcaacctgggctctgtcctccggaggctcatctccatggagaagaagcc 304 || ||||| || || || ||||| ||||||||||||||||| |||||||| Sbjct: 166 gggaacctcgggtccgtgctccgtaggctcatctccatggacaagaagcc 215 Score = 69.9 bits (35), Expect = 6e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 375 aagctgccggggctgtcgcggaagctgttccagaa 409 ||||||||||||||||||||||||||||||||||| Sbjct: 283 aagctgccggggctgtcgcggaagctgttccagaa 317
>gb|AY022670.1| Oryza sativa microsatellite MRG4995 containing (CCG)X8, genomic sequence Length = 224 Score = 69.9 bits (35), Expect = 6e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 375 aagctgccggggctgtcgcggaagctgttccagaa 409 ||||||||||||||||||||||||||||||||||| Sbjct: 145 aagctgccggggctgtcgcggaagctgttccagaa 179 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 251 gcacggcaacctgggctctgtcctccggaggctcatctccatggagaagaagcc 304 |||||| ||||| || || || ||||| ||||||||||||||||| |||||||| Sbjct: 24 gcacgggaacctcgggtccgtgctccgtaggctcatctccatggacaagaagcc 77
>ref|XM_475834.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 435 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 387 ctgtcgcggaagctgttccagaaggcgccgtcgga 421 ||||| ||||||||||||||||||||||||||||| Sbjct: 94 ctgtcacggaagctgttccagaaggcgccgtcgga 128
>gb|AC104278.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1345_B12, complete sequence Length = 119909 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 387 ctgtcgcggaagctgttccagaaggcgccgtcgga 421 ||||| ||||||||||||||||||||||||||||| Sbjct: 97269 ctgtcacggaagctgttccagaaggcgccgtcgga 97303
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 387 ctgtcgcggaagctgttccagaaggcgccgtcgga 421 ||||| ||||||||||||||||||||||||||||| Sbjct: 26944837 ctgtcacggaagctgttccagaaggcgccgtcgga 26944871 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/44 (88%), Gaps = 2/44 (4%) Strand = Plus / Minus Query: 122 ctccccgtcgcc--ctccccgtccccgcgccgcgccgcggccgc 163 |||||||||||| |||||| ||||||||| |||||||||||| Sbjct: 25622264 ctccccgtcgcctcctccccctccccgcgctccgccgcggccgc 25622221
>dbj|AK121657.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033063G18, full insert sequence Length = 1963 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 387 ctgtcgcggaagctgttccagaaggcgccgtcgga 421 ||||| ||||||||||||||||||||||||||||| Sbjct: 1018 ctgtcacggaagctgttccagaaggcgccgtcgga 1052
>ref|XM_521346.1| PREDICTED: Pan troglodytes similar to FUN14 domain containing 2; cervical cancer oncogene 3; hepatitis C virus core-binding protein 6 (LOC465950), mRNA Length = 720 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 130 cgccctccccgtccccgcgccgc 152 ||||||||||||||||||||||| Sbjct: 184 cgccctccccgtccccgcgccgc 162
>ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8@) on chromosome X Length = 652898 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 130 cgccctccccgtccccgcgccgc 152 ||||||||||||||||||||||| Sbjct: 191912 cgccctccccgtccccgcgccgc 191890
>emb|BX470111.4| Human DNA sequence from clone GS1-273L24 on chromosome X Contains the 5' end of the F8 gene for coagulation factor VIII procoagulant component (hemophilia A), the FUNDC2 gene for FUN14 domain containing 2, the MTCP1 gene for mature T-cell proliferation 1, the 5' end of a novel gene (C6.1A) and two CpG islands, complete sequence Length = 98981 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 130 cgccctccccgtccccgcgccgc 152 ||||||||||||||||||||||| Sbjct: 89964 cgccctccccgtccccgcgccgc 89986
>gb|AC159217.3| Pan troglodytes BAC clone CH251-347C9 from chromosome unknown, complete sequence Length = 173847 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 130 cgccctccccgtccccgcgccgc 152 ||||||||||||||||||||||| Sbjct: 19148 cgccctccccgtccccgcgccgc 19126
>emb|AL645722.2|HSA524G17 Homo sapiens chromosome X clone RP11-524G17 map Xq28, complete sequence Length = 189940 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 130 cgccctccccgtccccgcgccgc 152 ||||||||||||||||||||||| Sbjct: 14946 cgccctccccgtccccgcgccgc 14968
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 137 cccgtccccgcgccgcgccgcggcc 161 |||| |||||||||||||||||||| Sbjct: 901619 cccgcccccgcgccgcgccgcggcc 901595
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/44 (88%), Gaps = 2/44 (4%) Strand = Plus / Minus Query: 122 ctccccgtcgcc--ctccccgtccccgcgccgcgccgcggccgc 163 |||||||||||| |||||| ||||||||| |||||||||||| Sbjct: 138671 ctccccgtcgcctcctccccctccccgcgctccgccgcggccgc 138628
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 ccccgcgccgcgccgcggccg 162 ||||||||||||||||||||| Sbjct: 2469194 ccccgcgccgcgccgcggccg 2469214
>gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0483D07, complete sequence Length = 147122 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/44 (88%), Gaps = 2/44 (4%) Strand = Plus / Minus Query: 122 ctccccgtcgcc--ctccccgtccccgcgccgcgccgcggccgc 163 |||||||||||| |||||| ||||||||| |||||||||||| Sbjct: 34633 ctccccgtcgcctcctccccctccccgcgctccgccgcggccgc 34590
>gb|DQ481663.1| Takifugu rubripes HoxAa gene cluster, complete sequence Length = 385816 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 agcaggaggagagagatgagg 83 ||||||||||||||||||||| Sbjct: 75114 agcaggaggagagagatgagg 75134
>gb|AC153564.6| Mus musculus 10 BAC RP23-39C23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 241022 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 aggaggagagagatgaggaag 86 ||||||||||||||||||||| Sbjct: 108937 aggaggagagagatgaggaag 108917
>emb|AL669831.13| Human DNA sequence from clone RP11-206L10 on chromosome 1 Contains thirteen novel genes, a novel pseudogene, a novel gene similar to the F-box only protein 25 gene(FBXO25), a novel pseudogene similar to the beta-tubulin family and a CpG island, complete sequence Length = 179567 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 catctccatggagaagaagcc 304 ||||||||||||||||||||| Sbjct: 152958 catctccatggagaagaagcc 152938
>ref|XM_776886.1| PREDICTED: Strongylocentrotus purpuratus similar to Lon protease homolog, mitochondrial precursor (Lon protease-like protein) (LONP) (LONHs) (LOC576598), mRNA Length = 2241 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 385 ggctgtcgcggaagctgttccagaa 409 ||||| ||||||||||||||||||| Sbjct: 45 ggctgccgcggaagctgttccagaa 69
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ccgcgccgcgccgcggccgcg 164 ||||||||||||||||||||| Sbjct: 1674143 ccgcgccgcgccgcggccgcg 1674163 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 gaaggcggccgcggcctcgc 102 |||||||||||||||||||| Sbjct: 2144885 gaaggcggccgcggcctcgc 2144866
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 371 ggccaagctgccggggctgtcgcgg 395 ||||||||| ||||||||||||||| Sbjct: 1952122 ggccaagcttccggggctgtcgcgg 1952098
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 132 ccctccccgtccccgcgccgcgccgcggc 160 |||||| |||||||| ||||||||||||| Sbjct: 28305378 ccctcctcgtccccgggccgcgccgcggc 28305350 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 gacgactccccgtcgccctccccgtccc 144 |||| ||||||||| ||||||||||||| Sbjct: 23828731 gacgcctccccgtccccctccccgtccc 23828704 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ccgtccccgcgccgcgccgc 157 |||||||||||||||||||| Sbjct: 18203973 ccgtccccgcgccgcgccgc 18203954 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ccgtccccgcgccgcgccgc 157 |||||||||||||||||||| Sbjct: 18142671 ccgtccccgcgccgcgccgc 18142652
>gb|AF254822.1|AF254822 Homo sapiens SMARCA4 isoform (SMARCA4) gene, complete cds, alternatively spliced Length = 102910 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 cgccctccccgtccccgcgccgcgc 154 ||||||||||| ||||||||||||| Sbjct: 1093 cgccctccccggccccgcgccgcgc 1069
>gb|AC011442.5|AC011442 Homo sapiens chromosome 19 clone CTC-215O4, complete sequence Length = 143557 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 cgccctccccgtccccgcgccgcgc 154 ||||||||||| ||||||||||||| Sbjct: 82919 cgccctccccggccccgcgccgcgc 82895
>gb|AC008165.3|AC008165 Homo sapiens BAC clone RP11-139L10 from 7p22, complete sequence Length = 85404 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 catctccatggagaagaagcc 304 ||||||||||||||||||||| Sbjct: 38386 catctccatggagaagaagcc 38366
>gb|AC136777.8| Homo sapiens chromosome 8, clone RP11-63E5, complete sequence Length = 175263 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 catctccatggagaagaagcc 304 ||||||||||||||||||||| Sbjct: 81979 catctccatggagaagaagcc 81959
>gb|AC103954.9| Homo sapiens chromosome 8, clone CTA-366D10, complete sequence Length = 169754 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 catctccatggagaagaagcc 304 ||||||||||||||||||||| Sbjct: 74998 catctccatggagaagaagcc 74978
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 132 ccctccccgtccccgcgccgcgccgcggc 160 |||||| |||||||| ||||||||||||| Sbjct: 17956 ccctcctcgtccccgggccgcgccgcggc 17928
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 132 ccctccccgtccccgcgccgcgccgcggc 160 |||||| |||||||| ||||||||||||| Sbjct: 103407 ccctcctcgtccccgggccgcgccgcggc 103379
>dbj|AK103574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132P04, full insert sequence Length = 3564 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 agcaggaggagagagatgaggaagg 87 ||||||||| ||||||||||||||| Sbjct: 259 agcaggaggtgagagatgaggaagg 283
>dbj|AK072593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133F22, full insert sequence Length = 1996 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 132 ccctccccgtccccgcgccgcgccgcggc 160 |||||| |||||||| ||||||||||||| Sbjct: 89 ccctcctcgtccccgggccgcgccgcggc 61
>gb|AC000386.1|AC000386 Human Chromosome 15 pac pDJ378j17, complete sequence Length = 60023 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 catctccatggagaagaagcc 304 ||||||||||||||||||||| Sbjct: 8430 catctccatggagaagaagcc 8450
>gb|AC093316.28| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202i7, complete sequence Length = 226567 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 aggaggagagagatgaggaag 86 ||||||||||||||||||||| Sbjct: 199463 aggaggagagagatgaggaag 199483
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 gatccggccgcggcgacctgc 231 ||||||||||||||||||||| Sbjct: 547750 gatccggccgcggcgacctgc 547770
>ref|NM_188736.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1677 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ccgtccccgcgccgcgccgc 157 |||||||||||||||||||| Sbjct: 1229 ccgtccccgcgccgcgccgc 1210
>ref|XM_483658.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1356 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 ctccccgtcgccctccccgtcccc 145 |||||||||||| ||||||||||| Sbjct: 388 ctccccgtcgccgtccccgtcccc 365
>gb|DQ215035.1| Taeniopygia guttata clone 0058P0031C09 nucleoside diphosphate kinase-like mRNA, complete sequence Length = 645 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 agcggcggcggctccgggca 54 |||||||||||||||||||| Sbjct: 27 agcggcggcggctccgggca 46
>gb|DQ215039.1| Taeniopygia guttata clone 0058P0028E06 nucleoside diphosphate kinase-like mRNA, complete sequence Length = 646 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 agcggcggcggctccgggca 54 |||||||||||||||||||| Sbjct: 27 agcggcggcggctccgggca 46
>gb|DQ214427.1| Taeniopygia guttata clone 0058P0012E11 mitochondrial ribosomal protein L40 variant 3 internal polyA priming-like mRNA, complete sequence Length = 774 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ccccgcgccgcgccgcggcc 161 |||||||||||||||||||| Sbjct: 43 ccccgcgccgcgccgcggcc 24
>gb|DQ214426.1| Taeniopygia guttata clone 0058P0001A07 mitochondrial ribosomal protein L40 variant 3 internal polyA priming-like mRNA, complete sequence Length = 736 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ccccgcgccgcgccgcggcc 161 |||||||||||||||||||| Sbjct: 43 ccccgcgccgcgccgcggcc 24
>gb|DQ214425.1| Taeniopygia guttata clone 0058P0016D07 mitochondrial ribosomal protein L40 variant 3 internal polyA priming-like mRNA, complete sequence Length = 774 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ccccgcgccgcgccgcggcc 161 |||||||||||||||||||| Sbjct: 43 ccccgcgccgcgccgcggcc 24
>gb|DQ214424.1| Taeniopygia guttata clone 0058P0012D11 mitochondrial ribosomal protein L40 variant 3 internal polyA priming-like mRNA, complete sequence Length = 774 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ccccgcgccgcgccgcggcc 161 |||||||||||||||||||| Sbjct: 43 ccccgcgccgcgccgcggcc 24
>ref|NM_193402.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2886 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgtccccgcgccgcgccgcg 158 |||||||||||||||||||| Sbjct: 970 cgtccccgcgccgcgccgcg 951
>ref|NM_011582.1| Mus musculus thrombospondin 4 (Thbs4), mRNA Length = 3160 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 gaggaaggcggccgcggcctcgcg 103 ||||||||||||||||||| |||| Sbjct: 121 gaggaaggcggccgcggccgcgcg 98
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 cgcgccgcgccgcggccgcg 164 |||||||||||||||||||| Sbjct: 2617508 cgcgccgcgccgcggccgcg 2617527
>ref|XM_598382.2| PREDICTED: Bos taurus similar to lipoma HMGIC fusion partner-like 3 (LOC520147), mRNA Length = 534 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 agcggcggcggctccgggca 54 |||||||||||||||||||| Sbjct: 21 agcggcggcggctccgggca 2
>gb|BC037473.1| Mus musculus Ellis van Creveld syndrome 2 homolog (human), mRNA (cDNA clone MGC:47318 IMAGE:4237472), complete cds Length = 4107 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 caggaggagagagatgaggaaggc 88 ||||||||| |||||||||||||| Sbjct: 717 caggaggagggagatgaggaaggc 694
>ref|XM_583937.2| PREDICTED: Bos taurus similar to Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2), transcript variant 1 (LOC507344), mRNA Length = 1535 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 cgtccccgcgccgcgccgcggccg 162 ||||||||||||||||||| |||| Sbjct: 202 cgtccccgcgccgcgccgccgccg 179
>ref|XM_872605.1| PREDICTED: Bos taurus similar to Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2), transcript variant 2 (LOC507344), mRNA Length = 1274 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 cgtccccgcgccgcgccgcggccg 162 ||||||||||||||||||| |||| Sbjct: 202 cgtccccgcgccgcgccgccgccg 179
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 cgcgccgcgccgcggccgcg 164 |||||||||||||||||||| Sbjct: 3829846 cgcgccgcgccgcggccgcg 3829865
>ref|NM_145920.2| Mus musculus Ellis van Creveld syndrome 2 homolog (human) (Evc2), mRNA Length = 4107 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 caggaggagagagatgaggaaggc 88 ||||||||| |||||||||||||| Sbjct: 717 caggaggagggagatgaggaaggc 694
>gb|AC101984.13| Mus musculus chromosome 10, clone RP24-352K10, complete sequence Length = 167874 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 caggaggagagagatgaggaaggc 88 ||||||||| |||||||||||||| Sbjct: 160831 caggaggagggagatgaggaaggc 160808
>gb|AC166058.2| Mus musculus BAC clone RP23-343A20 from chromosome 17, complete sequence Length = 212262 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ccgcgccgcgccgcggccgc 163 |||||||||||||||||||| Sbjct: 148964 ccgcgccgcgccgcggccgc 148983
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 gatccggccgcggcgacctg 230 |||||||||||||||||||| Sbjct: 269455 gatccggccgcggcgacctg 269474
>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0095P22, complete sequence Length = 162766 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctgtcctccggaggctcatc 287 |||||||||||||||||||| Sbjct: 58702 ctgtcctccggaggctcatc 58683
>gb|AC002432.1| Homo sapiens BAC clone CTA-317G18 from 7, complete sequence Length = 143427 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 agcggcggcggctccgggca 54 |||||||||||||||||||| Sbjct: 45630 agcggcggcggctccgggca 45611
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0096I10, complete sequence Length = 171946 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 ctgtcctccggaggctcatc 287 |||||||||||||||||||| Sbjct: 151396 ctgtcctccggaggctcatc 151415
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 gcggccgcggcctcgcgctacgcc 110 ||||||||||||||||||| |||| Sbjct: 1173692 gcggccgcggcctcgcgctccgcc 1173715 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cccgtccccgcgccgcgccg 156 |||||||||||||||||||| Sbjct: 924767 cccgtccccgcgccgcgccg 924748
>gb|BC100126.1| Danio rerio cDNA clone MGC:113968 IMAGE:5602520, complete cds Length = 1893 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 caggaggagagagatgagga 84 |||||||||||||||||||| Sbjct: 577 caggaggagagagatgagga 596
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 cgcgccgcgccgcggccgcg 164 |||||||||||||||||||| Sbjct: 3570193 cgcgccgcgccgcggccgcg 3570212
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 cgtccccgcgccgcgccgcggccg 162 ||||||| |||||||||||||||| Sbjct: 22747 cgtccccccgccgcgccgcggccg 22724
>gb|BC064473.1| Mus musculus Ellis van Creveld syndrome 2 homolog (human), mRNA (cDNA clone MGC:70212 IMAGE:3156380), complete cds Length = 4117 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 caggaggagagagatgaggaaggc 88 ||||||||| |||||||||||||| Sbjct: 727 caggaggagggagatgaggaaggc 704
>dbj|AK134298.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030401H11 product:Ellis van Creveld syndrome 2 homolog (human), full insert sequence Length = 1767 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 caggaggagagagatgaggaaggc 88 ||||||||| |||||||||||||| Sbjct: 719 caggaggagggagatgaggaaggc 696
>gb|AC022039.7| Homo sapiens chromosome 8, clone RP11-3G21, complete sequence Length = 176815 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gcagctagcaggaggagaga 76 |||||||||||||||||||| Sbjct: 106649 gcagctagcaggaggagaga 106668
>ref|NM_199000.1| Homo sapiens lipoma HMGIC fusion partner-like 3 (LHFPL3), mRNA Length = 1852 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 agcggcggcggctccgggca 54 |||||||||||||||||||| Sbjct: 145 agcggcggcggctccgggca 126
>dbj|AK165051.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230015K17 product:Ellis van Creveld syndrome 2 homolog (human), full insert sequence Length = 1672 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 caggaggagagagatgaggaaggc 88 ||||||||| |||||||||||||| Sbjct: 621 caggaggagggagatgaggaaggc 598
>gb|AY260763.1| Homo sapiens lipoma HMGIC fusion-partner-like protein (LHFPL3) mRNA, complete cds Length = 1852 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 agcggcggcggctccgggca 54 |||||||||||||||||||| Sbjct: 145 agcggcggcggctccgggca 126
>dbj|AK044977.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130017E20 product:hypothetical protein, full insert sequence Length = 2797 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 caggaggagagagatgaggaaggc 88 ||||||||| |||||||||||||| Sbjct: 607 caggaggagggagatgaggaaggc 584
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 221 cggcgacctgcgctgccaggcgccgcagccgc 252 ||||||||||| || |||||||||||| |||| Sbjct: 1510351 cggcgacctgctctcccaggcgccgcaaccgc 1510382
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctgtcctccggaggctcatc 287 |||||||||||||||||||| Sbjct: 24257593 ctgtcctccggaggctcatc 24257574
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcggcggcggctccgggcaa 55 |||||||||||||||||||| Sbjct: 17300349 gcggcggcggctccgggcaa 17300330
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 ctccccgtcgccctccccgtcccc 145 |||||||||||| ||||||||||| Sbjct: 27495574 ctccccgtcgccgtccccgtcccc 27495551 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcggcggcggctccgggcaa 55 |||||||||||||||||||| Sbjct: 24573396 gcggcggcggctccgggcaa 24573377
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 269 tgtcctccggaggctcatctccatggagaagaagcc 304 |||||| || || |||||||||||||| |||||||| Sbjct: 991025 tgtccttcgcagactcatctccatggataagaagcc 990990
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgtccccgcgccgcgccgcg 158 |||||||||||||||||||| Sbjct: 20625402 cgtccccgcgccgcgccgcg 20625383 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ccgtccccgcgccgcgccgc 157 |||||||||||||||||||| Sbjct: 7936127 ccgtccccgcgccgcgccgc 7936108
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 gagaagaagcccagcgccaagaac 317 ||||||||||||||||| |||||| Sbjct: 99459 gagaagaagcccagcgcgaagaac 99482
>gb|AC157018.6| Mus musculus 10 BAC RP24-414A19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 146007 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 caggaggagagagatgaggaaggc 88 ||||||||| |||||||||||||| Sbjct: 122198 caggaggagggagatgaggaaggc 122221
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0024F24 Length = 172642 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgtccccgcgccgcgccgcg 158 |||||||||||||||||||| Sbjct: 87378 cgtccccgcgccgcgccgcg 87359
>dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1156H12 Length = 159509 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgtccccgcgccgcgccgcg 158 |||||||||||||||||||| Sbjct: 149224 cgtccccgcgccgcgccgcg 149205
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ggggcagcacgggggccggg 195 |||||||||||||||||||| Sbjct: 3533890 ggggcagcacgggggccggg 3533909
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ccggccgcggcgacctgcgc 233 |||||||||||||||||||| Sbjct: 958847 ccggccgcggcgacctgcgc 958828 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 cgcgccgcgccgcggccgcg 164 |||||||||||||||||||| Sbjct: 156657 cgcgccgcgccgcggccgcg 156676
>gb|AC104474.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024O21, complete sequence Length = 155651 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 ccgtccccgcgccgcgccgc 157 |||||||||||||||||||| Sbjct: 118850 ccgtccccgcgccgcgccgc 118869
>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1066G12 Length = 136263 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ccgtccccgcgccgcgccgc 157 |||||||||||||||||||| Sbjct: 131073 ccgtccccgcgccgcgccgc 131054
>dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1008C01 Length = 144141 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ccgtccccgcgccgcgccgc 157 |||||||||||||||||||| Sbjct: 42439 ccgtccccgcgccgcgccgc 42420
>dbj|AP003810.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_A04 Length = 128906 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 269 tgtcctccggaggctcatctccatggagaagaagcc 304 |||||| || || |||||||||||||| |||||||| Sbjct: 95372 tgtccttcgcagactcatctccatggataagaagcc 95337
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 cgcggtcagatccggccgcg 222 |||||||||||||||||||| Sbjct: 5264991 cgcggtcagatccggccgcg 5265010 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 cgcggtcagatccggccgcg 222 |||||||||||||||||||| Sbjct: 5258553 cgcggtcagatccggccgcg 5258572 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ggcggccgcggcctcgcgct 105 |||||||||||||||||||| Sbjct: 2847716 ggcggccgcggcctcgcgct 2847735
>dbj|AP006553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0061G23 Length = 144220 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ccgtccccgcgccgcgccgc 157 |||||||||||||||||||| Sbjct: 84345 ccgtccccgcgccgcgccgc 84326 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ccgtccccgcgccgcgccgc 157 |||||||||||||||||||| Sbjct: 23043 ccgtccccgcgccgcgccgc 23024
>dbj|AP006524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0077M23 Length = 167264 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ccgtccccgcgccgcgccgc 157 |||||||||||||||||||| Sbjct: 138321 ccgtccccgcgccgcgccgc 138302
>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcggcggcggctccgggcaa 55 |||||||||||||||||||| Sbjct: 87221 gcggcggcggctccgggcaa 87202
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcggcggcggctccgggcaa 55 |||||||||||||||||||| Sbjct: 24262 gcggcggcggctccgggcaa 24243
>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0556B08 Length = 136775 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 gacgactccccgtcgccctccccgtccc 144 |||| ||||||||| ||||||||||||| Sbjct: 68396 gacgcctccccgtccccctccccgtccc 68369
>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026F07 Length = 137354 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcggcggcggctccgggcaa 55 |||||||||||||||||||| Sbjct: 81656 gcggcggcggctccgggcaa 81637
>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0544G09 Length = 137481 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 ctccccgtcgccctccccgtcccc 145 |||||||||||| ||||||||||| Sbjct: 122369 ctccccgtcgccgtccccgtcccc 122346
>dbj|AP006265.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_E06 Length = 95069 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 ctccccgtcgccctccccgtcccc 145 |||||||||||| ||||||||||| Sbjct: 58823 ctccccgtcgccgtccccgtcccc 58800
>dbj|AK102908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113H11, full insert sequence Length = 3520 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 gacgactccccgtcgccctccccgtccc 144 |||| ||||||||| ||||||||||||| Sbjct: 188 gacgcctccccgtccccctccccgtccc 215
>dbj|AK073266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029A20, full insert sequence Length = 1356 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 ctccccgtcgccctccccgtcccc 145 |||||||||||| ||||||||||| Sbjct: 388 ctccccgtcgccgtccccgtcccc 365
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 agccgcacggcaacctgggc 266 |||||||||||||||||||| Sbjct: 124229 agccgcacggcaacctgggc 124210
>gb|AF130461.1|AF130461 Mus musculus thrombospondin-4 gene, promoter region and partial cds Length = 6713 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 gaggaaggcggccgcggcctcgcg 103 ||||||||||||||||||| |||| Sbjct: 1888 gaggaaggcggccgcggccgcgcg 1865
>gb|AF102887.1|AF102887 Mus musculus thrombospondin-4 mRNA, complete cds Length = 3160 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 gaggaaggcggccgcggcctcgcg 103 ||||||||||||||||||| |||| Sbjct: 121 gaggaaggcggccgcggccgcgcg 98
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 ctccccgtcgccctccccgtcccc 145 |||||||||||| ||||||||||| Sbjct: 120380 ctccccgtcgccgtccccgtcccc 120403 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 ctccccgtcgccctccccgtcccc 145 |||||||||||| ||||||||||| Sbjct: 6637 ctccccgtcgccgtccccgtcccc 6614
>gb|AC110565.7| Mus musculus chromosome 5, clone RP23-297N19, complete sequence Length = 194214 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 caggaggagagagatgaggaaggc 88 ||||||||| |||||||||||||| Sbjct: 67869 caggaggagggagatgaggaaggc 67846
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 371 ggccaagctgccggggctgtcgcg 394 |||||||||||||||| ||||||| Sbjct: 1974171 ggccaagctgccgggggtgtcgcg 1974148
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 cgcgccgcgccgcggccgcg 164 |||||||||||||||||||| Sbjct: 2686924 cgcgccgcgccgcggccgcg 2686943 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 cgcgccgcgccgcggccgcg 164 |||||||||||||||||||| Sbjct: 1296911 cgcgccgcgccgcggccgcg 1296892
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctgtcctccggaggctcatc 287 |||||||||||||||||||| Sbjct: 24569262 ctgtcctccggaggctcatc 24569243
>gb|AC149869.2| Mus musculus BAC clone RP23-3E12 from 7, complete sequence Length = 195392 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 ctccccgtcgccctccccgtcccc 145 ||||||||| |||||||||||||| Sbjct: 119074 ctccccgtccccctccccgtcccc 119051
>emb|CT025667.9| Mouse DNA sequence from clone RP23-227F4 on chromosome 13, complete sequence Length = 206864 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 gaggaaggcggccgcggcctcgcg 103 ||||||||||||||||||| |||| Sbjct: 32708 gaggaaggcggccgcggccgcgcg 32731
>dbj|AB083066.1| Mus musculus LBN mRNA for limbin, complete cds Length = 3663 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 caggaggagagagatgaggaaggc 88 ||||||||| |||||||||||||| Sbjct: 666 caggaggagggagatgaggaaggc 643
>gb|AY876121.1| Kocuria rhizophila strain DSM 348 cytochrome c oxidase subunit 1 gene, partial cds Length = 489 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 ggagaagaagcccagcgcca 312 |||||||||||||||||||| Sbjct: 204 ggagaagaagcccagcgcca 185
>emb|AL807764.9| Mouse DNA sequence from clone RP23-400F8 on chromosome 4, complete sequence Length = 226637 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 aggaggagagagatgaggaa 85 |||||||||||||||||||| Sbjct: 171183 aggaggagagagatgaggaa 171164
>dbj|AB070940.1| Streptomyces avermitilis oligomycin biosynthetic gene cluster Length = 104326 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 ggggcagcacgggggccggg 195 |||||||||||||||||||| Sbjct: 103915 ggggcagcacgggggccggg 103896 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,441,671 Number of Sequences: 3902068 Number of extensions: 3441671 Number of successful extensions: 94478 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 117 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 89352 Number of HSP's gapped (non-prelim): 5125 length of query: 421 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 399 effective length of database: 17,147,199,772 effective search space: 6841732709028 effective search space used: 6841732709028 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
