ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast59a06 |
|---|---|
| Clone Library Name | barley_pub |
>PTR2_ARATH (P46032) Peptide transporter PTR2 (Histidine-transporting protein)| Length = 585 Score = 99.8 bits (247), Expect = 2e-21 Identities = 48/142 (33%), Positives = 76/142 (53%) Frame = +2 Query: 2 FNLYFFTMGXXXXXXXXXXXYIQENVGWGWGFGIPAIGMLVSIVVFVIGYPLYVRLKPGG 181 FN ++F++ +IQEN GWG GFGIP + M ++I F G PLY KPGG Sbjct: 201 FNWFYFSINIGALVSSSLLVWIQENRGWGLGFGIPTVFMGLAIASFFFGTPLYRFQKPGG 260 Query: 182 SPFTRLXXXXXXXXXXXXXXLPEDPRMLYHDKELDALISTNGRLLHTNQLTFLDRVAIVM 361 SP TR+ +PED +LY ++ ++ I+ + ++ HT+ +LD+ A++ Sbjct: 261 SPITRISQVVVASFRKSSVKVPEDATLLYETQDKNSAIAGSRKIEHTDDCQYLDKAAVIS 320 Query: 362 AGDTAGSGKLDLWRLSTVHRVE 427 ++ + WRL TV +VE Sbjct: 321 EEESKSGDYSNSWRLCTVTQVE 342
>CHL1_ARATH (Q05085) Nitrate/chlorate transporter| Length = 590 Score = 69.7 bits (169), Expect = 3e-12 Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 6/148 (4%) Frame = +2 Query: 2 FNLYFFTMGXXXXXXXXXXXYIQENVGWGWGFGIPAIGMLVSIVVFVIGYPLYVRLKPGG 181 FN +FF + Y+Q++VG WG+GI A +++++ VF+ G Y K G Sbjct: 190 FNRFFFCINVGSLLAVTVLVYVQDDVGRKWGYGICAFAIVLALSVFLAGTNRYRFKKLIG 249 Query: 182 SPFTRLXXXXXXXXXXXXXXLPEDPRMLYHDKELDALISTNG------RLLHTNQLTFLD 343 SP T++ LP DP LY ++D +I+ G +L HT Q LD Sbjct: 250 SPMTQVAAVIVAAWRNRKLELPADPSYLY---DVDDIIAAEGSMKGKQKLPHTEQFRSLD 306 Query: 344 RVAIVMAGDTAGSGKLDLWRLSTVHRVE 427 + AI S + W LST+ VE Sbjct: 307 KAAIRDQEAGVTSNVFNKWTLSTLTDVE 334
>S15A1_RABIT (P36836) Oligopeptide transporter, small intestine isoform (Peptide| transporter 1) (Intestinal H(+)/peptide cotransporter) (Solute carrier family 15 member 1) Length = 707 Score = 39.3 bits (90), Expect = 0.004 Identities = 17/35 (48%), Positives = 26/35 (74%) Frame = +2 Query: 95 FGIPAIGMLVSIVVFVIGYPLYVRLKPGGSPFTRL 199 FGIPAI M VS++VF+IG +Y + KP G+ +++ Sbjct: 202 FGIPAILMAVSLIVFIIGSGMYKKFKPQGNILSKV 236
>YBGH_ECOLI (P75742) Inner membrane transporter ybgH| Length = 493 Score = 37.4 bits (85), Expect = 0.015 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +2 Query: 62 YIQENVGWGWGFGIPAIGMLVSIVVFVIG 148 Y QE W GFG+ A+GM+ +V+F+ G Sbjct: 160 YAQEEYSWAMGFGLAAVGMIAGLVIFLCG 188
>S15A1_CANFA (Q8WMX5) Oligopeptide transporter, small intestine isoform (Peptide| transporter 1) (Intestinal H(+)/peptide cotransporter) (Solute carrier family 15 member 1) Length = 708 Score = 35.4 bits (80), Expect = 0.056 Identities = 15/30 (50%), Positives = 22/30 (73%) Frame = +2 Query: 95 FGIPAIGMLVSIVVFVIGYPLYVRLKPGGS 184 FG+PA M VS++VFVIG +Y + +P G+ Sbjct: 202 FGVPAALMAVSLIVFVIGSGMYKKFQPQGN 231
>S15A1_HUMAN (P46059) Oligopeptide transporter, small intestine isoform (Peptide| transporter 1) (Intestinal H(+)/peptide cotransporter) (Solute carrier family 15 member 1) Length = 708 Score = 35.0 bits (79), Expect = 0.074 Identities = 14/30 (46%), Positives = 22/30 (73%) Frame = +2 Query: 95 FGIPAIGMLVSIVVFVIGYPLYVRLKPGGS 184 FG+PA M V+++VFV+G +Y + KP G+ Sbjct: 202 FGVPAALMAVALIVFVLGSGMYKKFKPQGN 231
>S15A1_RAT (P51574) Oligopeptide transporter, small intestine isoform (Peptide| transporter 1) (Intestinal H(+)/peptide cotransporter) (Solute carrier family 15 member 1) (Proton-coupled dipeptide cotransporter) Length = 710 Score = 33.5 bits (75), Expect = 0.21 Identities = 13/30 (43%), Positives = 22/30 (73%) Frame = +2 Query: 95 FGIPAIGMLVSIVVFVIGYPLYVRLKPGGS 184 FG+PA M V+++VFV+G +Y + +P G+ Sbjct: 202 FGVPAALMAVALIVFVLGSGMYKKFQPQGN 231
>S15A1_MOUSE (Q9JIP7) Oligopeptide transporter, small intestine isoform (Peptide| transporter 1) (Intestinal H(+)/peptide cotransporter) (Solute carrier family 15 member 1) (Proton-coupled dipeptide cotransporter) Length = 709 Score = 33.5 bits (75), Expect = 0.21 Identities = 13/30 (43%), Positives = 22/30 (73%) Frame = +2 Query: 95 FGIPAIGMLVSIVVFVIGYPLYVRLKPGGS 184 FG+PA M V+++VFV+G +Y + +P G+ Sbjct: 202 FGVPAALMAVALIVFVLGSGMYKKFQPQGN 231
>OPT1_DROME (P91679) Oligopeptide transporter 1 (Protein YIN)| Length = 743 Score = 32.3 bits (72), Expect = 0.48 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 7/68 (10%) Frame = +2 Query: 2 FNLYFFTMGXXXXXXXXXXXYIQENVG-------WGWGFGIPAIGMLVSIVVFVIGYPLY 160 F+L++F + ++ +V + FG+PAI M+ S+++F+ G LY Sbjct: 173 FSLFYFAINAGSLISTTFTPILRADVHCFGDQDCFSLAFGVPAILMIFSVIIFMAGKRLY 232 Query: 161 VRLKPGGS 184 P G+ Sbjct: 233 RCQPPAGN 240
>S15A2_RABIT (P46029) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 30.4 bits (67), Expect = 1.8 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = +2 Query: 95 FGIPAIGMLVSIVVFVIGYPLYVRLKPGGS 184 FG+P + M++++VVF +G +Y + P G+ Sbjct: 221 FGVPGLLMVIALVVFAMGSKMYKKPPPEGN 250
>TPPB_SALTY (Q8ZPM6) Tripeptide permease tppB| Length = 501 Score = 30.4 bits (67), Expect = 1.8 Identities = 10/46 (21%), Positives = 21/46 (45%) Frame = +2 Query: 2 FNLYFFTMGXXXXXXXXXXXYIQENVGWGWGFGIPAIGMLVSIVVF 139 F +Y+ ++ ++ GW F + +GML+++V F Sbjct: 152 FTMYYMSVNIGSFFSMLATPWLAARYGWSTAFALSVVGMLITVVNF 197
>TPPB_SALTI (Q8Z6Q5) Tripeptide permease tppB| Length = 501 Score = 30.4 bits (67), Expect = 1.8 Identities = 10/46 (21%), Positives = 21/46 (45%) Frame = +2 Query: 2 FNLYFFTMGXXXXXXXXXXXYIQENVGWGWGFGIPAIGMLVSIVVF 139 F +Y+ ++ ++ GW F + +GML+++V F Sbjct: 152 FTMYYMSVNIGSFFSMLATPWLAARYGWSTAFALSVVGMLITVVNF 197
>S15A2_HUMAN (Q16348) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 30.0 bits (66), Expect = 2.4 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = +2 Query: 95 FGIPAIGMLVSIVVFVIGYPLYVRLKPGGS 184 FG+P + M++++VVF +G +Y + P G+ Sbjct: 221 FGVPGLLMVIALVVFAMGSKIYNKPPPEGN 250
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.0 bits (66), Expect = 2.4 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -2 Query: 147 PITNTTMETSMPMAGIPNPHPHPTFSWMYTTTVSASSTANP 25 PIT T T++P P+P P T + TTT S +T P Sbjct: 1625 PITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTP 1665 Score = 30.0 bits (66), Expect = 2.4 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -2 Query: 147 PITNTTMETSMPMAGIPNPHPHPTFSWMYTTTVSASSTANP 25 PIT T T++P P+P P T + TTT S +T P Sbjct: 1546 PITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTP 1586
>S15A2_MOUSE (Q9ES07) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 29.6 bits (65), Expect = 3.1 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +2 Query: 95 FGIPAIGMLVSIVVFVIGYPLYVRLKPGGS 184 FGIP + M++++VVF +G +Y + P G+ Sbjct: 221 FGIPGLLMVLALVVFAMGSKMYRKPPPEGN 250
>S15A2_RAT (Q63424) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 29.3 bits (64), Expect = 4.0 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = +2 Query: 95 FGIPAIGMLVSIVVFVIGYPLYVRLKPGGS 184 FG+P + M++++VVF +G +Y + P G+ Sbjct: 221 FGVPGLLMVLALVVFAMGSKMYRKPPPEGN 250
>OPT1_CAEEL (Q17758) Oligopeptide transporter 1 (Di-/tri-peptide transporter| CPTA) Length = 785 Score = 29.3 bits (64), Expect = 4.0 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 6/64 (9%) Frame = +2 Query: 2 FNLYFFTMGXXXXXXXXXXXYIQENVGWGW------GFGIPAIGMLVSIVVFVIGYPLYV 163 F++++F++ Y + +G FGIPAI M+V+ +VF+ G Y Sbjct: 171 FSMFYFSINAGSLISMWLTPYFRSMSCFGHDSCYPLAFGIPAILMIVATLVFMAGSFWYK 230 Query: 164 RLKP 175 ++ P Sbjct: 231 KVPP 234
>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein phosphatase| (EC 3.1.3.16) (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory Length = 1687 Score = 29.3 bits (64), Expect = 4.0 Identities = 11/33 (33%), Positives = 15/33 (45%) Frame = -1 Query: 178 PRLEPDVERVPDHEHHDGDQHADGRYPEPPSPP 80 P LE +V+ + H Q + P PP PP Sbjct: 1624 PELEEEVKEIMKHHQEQQQQQQQQQLPPPPQPP 1656
>MRAY_BIFLO (Q8G4Q7) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC| 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase) Length = 368 Score = 29.3 bits (64), Expect = 4.0 Identities = 12/20 (60%), Positives = 17/20 (85%) Frame = +2 Query: 110 IGMLVSIVVFVIGYPLYVRL 169 IGMLVS++V ++G PL +RL Sbjct: 6 IGMLVSLIVTLVGTPLLIRL 25
>TPPB_ECOLI (P77304) Tripeptide permease tppB| Length = 500 Score = 29.3 bits (64), Expect = 4.0 Identities = 10/46 (21%), Positives = 21/46 (45%) Frame = +2 Query: 2 FNLYFFTMGXXXXXXXXXXXYIQENVGWGWGFGIPAIGMLVSIVVF 139 F +Y+ ++ ++ GW F + +G+L++IV F Sbjct: 152 FTMYYMSVNIGSFFSMIATPWLAAKYGWSVAFALSVVGLLITIVNF 197
>TPPB_ECOL6 (Q8FH91) Tripeptide permease tppB| Length = 500 Score = 29.3 bits (64), Expect = 4.0 Identities = 10/46 (21%), Positives = 21/46 (45%) Frame = +2 Query: 2 FNLYFFTMGXXXXXXXXXXXYIQENVGWGWGFGIPAIGMLVSIVVF 139 F +Y+ ++ ++ GW F + +G+L++IV F Sbjct: 152 FTMYYMSVNIGSFFSMIATPWLAAKYGWSVAFALSVVGLLITIVNF 197
>TPPB_ECO57 (Q8X651) Tripeptide permease tppB| Length = 500 Score = 29.3 bits (64), Expect = 4.0 Identities = 10/46 (21%), Positives = 21/46 (45%) Frame = +2 Query: 2 FNLYFFTMGXXXXXXXXXXXYIQENVGWGWGFGIPAIGMLVSIVVF 139 F +Y+ ++ ++ GW F + +G+L++IV F Sbjct: 152 FTMYYMSVNIGSFFSMIATPWLAAKYGWSVAFALSVVGLLITIVNF 197
>MSBB_HAEIN (P44567) Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA| acyltransferase (EC 2.3.1.-) Length = 318 Score = 29.3 bits (64), Expect = 4.0 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -2 Query: 117 MPMAGIPNPHPHPTFSWMYTTT 52 MPM + NPH +P W++T T Sbjct: 161 MPMTSMYNPHRNPLVDWLWTIT 182
>LAC2_AGABI (Q12542) Laccase-2 precursor (EC 1.10.3.2) (Laccase II)| (Benzenediol:oxygen oxidoreductase) (Urishiol oxidase) (Diphenol oxidase) Length = 520 Score = 28.9 bits (63), Expect = 5.3 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 5/49 (10%) Frame = -1 Query: 193 RERAAPRLEPDVERVPDH-----EHHDGDQHADGRYPEPPSPPHVLLDV 62 R + AP +EP VP H E H Q G+ + P H+ L++ Sbjct: 308 RYKGAPEVEPTTVNVPGHKLLDQEMHPIAQEGPGKLGDGPPDKHITLNI 356
>TIM54_NEUCR (Q9C0Q7) Mitochondrial import inner membrane translocase subunit| tim-54 Length = 425 Score = 28.5 bits (62), Expect = 6.9 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = -2 Query: 111 MAGIPN-PHPHPTFSWMYTTTVSASSTA 31 M G+PN P+ P+ +WM TVSAS TA Sbjct: 1 MLGLPNLPNKLPSRNWMIFWTVSASITA 28
>BAGS_BOMMO (Q9BLJ6) BAG domain-containing protein Samui| Length = 677 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -1 Query: 175 RLEPDVERVPDHEHHDGDQHADGRYPEPPSPPHV 74 R +P + + DH H G+ A +Y PP PPHV Sbjct: 213 RDKPVINKSVDHGTHFGE--AKPQYVPPPPPPHV 244
>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)| (Tracheobronchial mucin) (TBM) (Major airway glycoprotein) (Fragment) Length = 1233 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Frame = -2 Query: 210 TTCASRVNGLPPGLSRT*SGYPITNT----TMETSMPMAGIPNPHPHPTFSWMYTTTVSA 43 +T ++ + +P G T S P T+T T T+ P+P P + + TT+ ++ Sbjct: 19 STTSAPITSMPSGPGTTPSPVPTTSTTSAPTTSTTSGPGTTPSPVPTTSTTSAPTTSTTS 78 Query: 42 SSTAN 28 +STA+ Sbjct: 79 ASTAS 83
>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2| Length = 991 Score = 28.1 bits (61), Expect = 9.0 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = -2 Query: 102 IPNPHPHPTFSWMY 61 +PNPHPHP F+ Y Sbjct: 978 VPNPHPHPHFTRRY 991 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,155,449 Number of Sequences: 219361 Number of extensions: 882740 Number of successful extensions: 4115 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3790 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4092 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
