ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast59a04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1511 Score = 438 bits (221), Expect = e-120 Identities = 343/383 (89%), Gaps = 6/383 (1%) Strand = Plus / Plus Query: 57 aagatgttcgggttcgggcaccaccacaaggaccaggcgccggcggcg---tccggcccc 113 |||||||| |||||||||||||||||||| |||||| ||||||||| || | ||| Sbjct: 78 aagatgtttgggttcgggcaccaccacaa---ccaggcaccggcggcgccgtcggacccg 134 Query: 114 aaccagatcttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgac 173 ||||||||||||||||||| |||||| ||| |||| ||||||||||| ||||||||||| Sbjct: 135 aaccagatcttcaagatcttctgccgcgccaacgagaactactgcctcaccgtccgcgac 194 Query: 174 ggcgaggtcgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggac 233 ||| ||||| ||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 195 agcgccgtcgtcctcgcccccgtcaaccccaaggacgagcaccagcactggttcaaggac 254 Query: 234 atgcgcttcagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaac 293 ||| | |||||||||| || ||||||| |||||||||||||| ||||| ||||||||| Sbjct: 255 atgaggttcagcaccaaggtgaaggacggggagggcatgccggcgttcgccctcgtcaac 314 Query: 294 aaggccaccggcctcgccgtcaagcactccatcggccagtcccaccccgtgaagctggtg 353 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 315 aaggccaccggactcgccgtcaagcactccctcggccagtcccaccccgtgaagcttgtg 374 Query: 354 ccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggc 413 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 375 ccgttcaacccggagtacgaggacgcgtcggtgctgtggacggagagcaaggacgtcggc 434 Query: 414 aagggcttncgctgcatncgcat 436 |||||||| |||||||| ||||| Sbjct: 435 aagggcttccgctgcatccgcat 457 Score = 153 bits (77), Expect = 6e-34 Identities = 237/291 (81%) Strand = Plus / Plus Query: 146 cgaggactactgcctcgccgtccgcgacggcgaggtcgtgctcgcccccgtcaaccccaa 205 |||||||||||||||| |||||||| ||||| | | ||||||||| ||||||| Sbjct: 686 cgaggactactgcctcaccgtccgcaacggcaccgcctgcctcgcccccaagaaccccag 745 Query: 206 ggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaaga 265 |||||| |||||||||| ||||||||||| | ||||| || ||| |||||| || Sbjct: 746 ggacgactaccagcactggatcaaggacatgaggcacagcaacaagatcagggacgagga 805 Query: 266 gggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccat 325 ||| ||||| |||||||| |||||||||| ||||||| ||| |||||||||||| Sbjct: 806 aggctacccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaagcactccac 865 Query: 326 cggccagtcccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggt 385 ||| ||| |||||| ||||||||||| || | |||||| | |||| |||||| ||| || Sbjct: 866 cggacagggccacccggtgaagctggttccctacaacccagagtaccaggacgagtctgt 925 Query: 386 gctgtggacggagagcaaggacgtgggcaagggcttncgctgcatncgcat 436 ||||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 926 gctgtggacggagagcaaggatgtgggcaagggcttccgctgcatccgcat 976
>dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K07, full insert sequence Length = 1512 Score = 438 bits (221), Expect = e-120 Identities = 343/383 (89%), Gaps = 6/383 (1%) Strand = Plus / Plus Query: 57 aagatgttcgggttcgggcaccaccacaaggaccaggcgccggcggcg---tccggcccc 113 |||||||| |||||||||||||||||||| |||||| ||||||||| || | ||| Sbjct: 78 aagatgtttgggttcgggcaccaccacaa---ccaggcaccggcggcgccgtcggacccg 134 Query: 114 aaccagatcttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgac 173 ||||||||||||||||||| |||||| ||| |||| ||||||||||| ||||||||||| Sbjct: 135 aaccagatcttcaagatcttctgccgcgccaacgagaactactgcctcaccgtccgcgac 194 Query: 174 ggcgaggtcgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggac 233 ||| ||||| ||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 195 agcgccgtcgtcctcgcccccgtcaaccccaaggacgagcaccagcactggttcaaggac 254 Query: 234 atgcgcttcagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaac 293 ||| | |||||||||| || ||||||| |||||||||||||| ||||| ||||||||| Sbjct: 255 atgaggttcagcaccaaggtgaaggacggggagggcatgccggcgttcgccctcgtcaac 314 Query: 294 aaggccaccggcctcgccgtcaagcactccatcggccagtcccaccccgtgaagctggtg 353 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 315 aaggccaccggactcgccgtcaagcactccctcggccagtcccaccccgtgaagcttgtg 374 Query: 354 ccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggc 413 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 375 ccgttcaacccggagtacgaggacgcgtcggtgctgtggacggagagcaaggacgtcggc 434 Query: 414 aagggcttncgctgcatncgcat 436 |||||||| |||||||| ||||| Sbjct: 435 aagggcttccgctgcatccgcat 457 Score = 153 bits (77), Expect = 6e-34 Identities = 237/291 (81%) Strand = Plus / Plus Query: 146 cgaggactactgcctcgccgtccgcgacggcgaggtcgtgctcgcccccgtcaaccccaa 205 |||||||||||||||| |||||||| ||||| | | ||||||||| ||||||| Sbjct: 686 cgaggactactgcctcaccgtccgcaacggcaccgcctgcctcgcccccaagaaccccag 745 Query: 206 ggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaaga 265 |||||| |||||||||| ||||||||||| | ||||| || ||| |||||| || Sbjct: 746 ggacgactaccagcactggatcaaggacatgaggcacagcaacaagatcagggacgagga 805 Query: 266 gggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccat 325 ||| ||||| |||||||| |||||||||| ||||||| ||| |||||||||||| Sbjct: 806 aggctacccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaagcactccac 865 Query: 326 cggccagtcccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggt 385 ||| ||| |||||| ||||||||||| || | |||||| | |||| |||||| ||| || Sbjct: 866 cggacagggccacccggtgaagctggttccctacaacccagagtaccaggacgagtctgt 925 Query: 386 gctgtggacggagagcaaggacgtgggcaagggcttncgctgcatncgcat 436 ||||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 926 gctgtggacggagagcaaggatgtgggcaagggcttccgctgcatccgcat 976
>gb|BT016442.1| Zea mays clone Contig275 mRNA sequence Length = 1443 Score = 355 bits (179), Expect = 8e-95 Identities = 297/337 (88%) Strand = Plus / Plus Query: 100 cggcgtccggccccaaccagatcttcaagatctactgccgggcctccgaggactactgcc 159 ||||||| |||||||||||| | |||||||||| |||||| ||| |||| ||||||||| Sbjct: 99 cggcgtcgggccccaaccaggtgttcaagatcttctgccgcgccaacgagaactactgcc 158 Query: 160 tcgccgtccgcgacggcgaggtcgtgctcgcccccgtcaaccccaaggacgagacccagc 219 | |||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||| Sbjct: 159 tggccgtccgcgacggcgccgtcgtgctggccccggtcaaccccaaggacgaccaccagc 218 Query: 220 actggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccggcct 279 ||||| |||||||||||||||||||||| ||||||||||| || ||||||||||| | Sbjct: 219 actggtacaaggacatgcgcttcagcacccgggtcaaggacgaggaaggcatgccggcgt 278 Query: 280 tcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccacc 339 |||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||| Sbjct: 279 tcgcgctcgtcaacaaggccacggggctcgccatcaagcactccctcggccagtcccacc 338 Query: 340 ccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggaga 399 | || ||||| | ||| |||| ||||| | |||||||||||||||||||||||||||| Sbjct: 339 cggtcaagctcgcgcctttcagcccggaccaggaggacgcgtcggtgctgtggacggaga 398 Query: 400 gcaaggacgtgggcaagggcttncgctgcatncgcat 436 |||||||||||||||||||||| |||||||| ||||| Sbjct: 399 gcaaggacgtgggcaagggcttccgctgcatccgcat 435 Score = 105 bits (53), Expect = 1e-19 Identities = 186/231 (80%) Strand = Plus / Plus Query: 206 ggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaaga 265 ||||||| |||||||||| |||||||||||||| ||||||| || |||||| || Sbjct: 703 ggacgagtaccagcactggttcaaggacatgcgccacagcacccgggtgcgggacgagga 762 Query: 266 gggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccat 325 |||| ||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 763 gggctacccggccttcgcgctcgtcaacaaggtcaccggcgaggcgctcaagcactccac 822 Query: 326 cggccagtcccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggt 385 || ||| ||||||||| ||||| ||||| | |||||||| ||| |||||| ||| || Sbjct: 823 ggggcagggccaccccgtcaagctcgtgccctacaacccggactaccaggacgagtccgt 882 Query: 386 gctgtggacggagagcaaggacgtgggcaagggcttncgctgcatncgcat 436 ||| ||||| |||||| ||||| ||||| ||||| |||||| | ||||| Sbjct: 883 gctctggaccgagagccgcgacgtcggcaacggcttccgctgcgtccgcat 933
>ref|XM_479572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1239 Score = 307 bits (155), Expect = 2e-80 Identities = 204/221 (92%) Strand = Plus / Plus Query: 216 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 275 ||||||||| ||||||||||| | |||||||||| || ||||||| |||||||||||| Sbjct: 22 cagcactggttcaaggacatgaggttcagcaccaaggtgaaggacggggagggcatgccg 81 Query: 276 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 335 || ||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 82 gcgttcgccctcgtcaacaaggccaccggactcgccgtcaagcactccctcggccagtcc 141 Query: 336 caccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacg 395 |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142 caccccgtgaagcttgtgccgttcaacccggagtacgaggacgcgtcggtgctgtggacg 201 Query: 396 gagagcaaggacgtgggcaagggcttncgctgcatncgcat 436 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 202 gagagcaaggacgtcggcaagggcttccgctgcatccgcat 242 Score = 153 bits (77), Expect = 6e-34 Identities = 237/291 (81%) Strand = Plus / Plus Query: 146 cgaggactactgcctcgccgtccgcgacggcgaggtcgtgctcgcccccgtcaaccccaa 205 |||||||||||||||| |||||||| ||||| | | ||||||||| ||||||| Sbjct: 471 cgaggactactgcctcaccgtccgcaacggcaccgcctgcctcgcccccaagaaccccag 530 Query: 206 ggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaaga 265 |||||| |||||||||| ||||||||||| | ||||| || ||| |||||| || Sbjct: 531 ggacgactaccagcactggatcaaggacatgaggcacagcaacaagatcagggacgagga 590 Query: 266 gggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccat 325 ||| ||||| |||||||| |||||||||| ||||||| ||| |||||||||||| Sbjct: 591 aggctacccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaagcactccac 650 Query: 326 cggccagtcccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggt 385 ||| ||| |||||| ||||||||||| || | |||||| | |||| |||||| ||| || Sbjct: 651 cggacagggccacccggtgaagctggttccctacaacccagagtaccaggacgagtctgt 710 Query: 386 gctgtggacggagagcaaggacgtgggcaagggcttncgctgcatncgcat 436 ||||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 711 gctgtggacggagagcaaggatgtgggcaagggcttccgctgcatccgcat 761
>dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D04, full insert sequence Length = 1239 Score = 307 bits (155), Expect = 2e-80 Identities = 204/221 (92%) Strand = Plus / Plus Query: 216 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 275 ||||||||| ||||||||||| | |||||||||| || ||||||| |||||||||||| Sbjct: 22 cagcactggttcaaggacatgaggttcagcaccaaggtgaaggacggggagggcatgccg 81 Query: 276 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 335 || ||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 82 gcgttcgccctcgtcaacaaggccaccggactcgccgtcaagcactccctcggccagtcc 141 Query: 336 caccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacg 395 |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142 caccccgtgaagcttgtgccgttcaacccggagtacgaggacgcgtcggtgctgtggacg 201 Query: 396 gagagcaaggacgtgggcaagggcttncgctgcatncgcat 436 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 202 gagagcaaggacgtcggcaagggcttccgctgcatccgcat 242 Score = 147 bits (74), Expect = 3e-32 Identities = 141/164 (85%) Strand = Plus / Plus Query: 273 ccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccag 332 ||||| |||||||| |||||||||| ||||||| ||| |||||||||||| ||| ||| Sbjct: 598 ccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaagcactccaccggacag 657 Query: 333 tcccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtgg 392 |||||| ||||||||||| || | |||||| | |||| |||||| ||| ||||||||| Sbjct: 658 ggccacccggtgaagctggttccctacaacccagagtaccaggacgagtctgtgctgtgg 717 Query: 393 acggagagcaaggacgtgggcaagggcttncgctgcatncgcat 436 |||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 718 acggagagcaaggatgtgggcaagggcttccgctgcatccgcat 761
>ref|NM_187532.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1122 Score = 248 bits (125), Expect = 1e-62 Identities = 267/315 (84%) Strand = Plus / Plus Query: 122 cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 181 ||||||||||| |||||| ||| ||||| |||||| ||||||| ||||| || | || Sbjct: 90 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 149 Query: 182 cgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggacatgcgctt 241 ||| |||||||| |||||| |||||| |||||||||| ||||||||||||||| Sbjct: 150 cgtcctcgccccgaccaacccgcgcgacgagcaccagcactggtacaaggacatgcgctt 209 Query: 242 cagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaacaaggccac 301 |||| ||| |||||||||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 210 cagcgccaagatcaaggacgaggagggcaacccggcgttcgcgctcgtcaacaaggccac 269 Query: 302 cggcctcgccgtcaagcactccatcggccagtcccaccccgtgaagctggtgccgttcaa 361 |||||||||| ||||||||||| |||||||| |||||| |||||||||| ||||||||| Sbjct: 270 cggcctcgccatcaagcactccctcggccagggccacccggtgaagctggcgccgttcaa 329 Query: 362 cccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggcaagggctt 421 ||||| |||| ||||| |||||||||||||||||||||| |||||||||||| |||| Sbjct: 330 cccggagtacccggacgagtcggtgctgtggacggagagcggcgacgtgggcaagagctt 389 Query: 422 ncgctgcatncgcat 436 |||||||| ||||| Sbjct: 390 ccgctgcatccgcat 404 Score = 95.6 bits (48), Expect = 1e-16 Identities = 178/222 (80%) Strand = Plus / Plus Query: 215 ccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgcc 274 |||||||||| ||||||||||| | ||||| || | |||||||||| || ||| || Sbjct: 690 ccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaaggctaccc 749 Query: 275 ggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtc 334 |||||||| |||||||||| || ||||||| ||| ||||||||||| ||| | Sbjct: 750 cgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcccaaggcgaagg 809 Query: 335 ccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggac 394 |||||| |||||||||||||||| |||||| | ||| |||||| ||||||||||||||| Sbjct: 810 ccaccctgtgaagctggtgccgtacaaccccggataccaggacgagtcggtgctgtggac 869 Query: 395 ggagagcaaggacgtgggcaagggcttncgctgcatncgcat 436 ||||||| ||||| || | ||||| |||||||| ||||| Sbjct: 870 ggagagccgcgacgtcgggcacggcttccgctgcatccgcat 911
>emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1 Length = 1458 Score = 248 bits (125), Expect = 1e-62 Identities = 267/315 (84%) Strand = Plus / Plus Query: 122 cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 181 ||||||||||| |||||| ||| ||||| |||||| ||||||| ||||| || | || Sbjct: 152 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 211 Query: 182 cgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggacatgcgctt 241 ||| |||||||| |||||| |||||| |||||||||| ||||||||||||||| Sbjct: 212 cgtcctcgccccgaccaacccgcgcgacgagcaccagcactggtacaaggacatgcgctt 271 Query: 242 cagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaacaaggccac 301 |||| ||| |||||||||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 272 cagcgccaagatcaaggacgaggagggcaacccggcgttcgcgctcgtcaacaaggccac 331 Query: 302 cggcctcgccgtcaagcactccatcggccagtcccaccccgtgaagctggtgccgttcaa 361 |||||||||| ||||||||||| |||||||| |||||| |||||||||| ||||||||| Sbjct: 332 cggcctcgccatcaagcactccctcggccagggccacccggtgaagctggcgccgttcaa 391 Query: 362 cccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggcaagggctt 421 ||||| |||| ||||| |||||||||||||||||||||| |||||||||||| |||| Sbjct: 392 cccggagtacccggacgagtcggtgctgtggacggagagcggcgacgtgggcaagagctt 451 Query: 422 ncgctgcatncgcat 436 |||||||| ||||| Sbjct: 452 ccgctgcattcgcat 466 Score = 87.7 bits (44), Expect = 3e-14 Identities = 177/222 (79%) Strand = Plus / Plus Query: 215 ccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgcc 274 |||||||||| ||||||||||| | ||||| || | |||||||||| || || || Sbjct: 752 ccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaagggtaccc 811 Query: 275 ggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtc 334 |||||||| |||||||||| || ||||||| ||| ||||||||||| ||| | Sbjct: 812 cgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcccaaggcgaagg 871 Query: 335 ccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggac 394 |||||| |||||||||||||||| |||||| | ||| |||||| ||||||||||||||| Sbjct: 872 ccaccctgtgaagctggtgccgtacaaccccggataccaggacgagtcggtgctgtggac 931 Query: 395 ggagagcaaggacgtgggcaagggcttncgctgcatncgcat 436 ||||||| ||||| || | ||||| |||||||| ||||| Sbjct: 932 ggagagccgcgacgtcgggcacggcttccgctgcatccgcat 973 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 caagatgttcgggttcgggcaccac 80 |||||||||||| |||||||||||| Sbjct: 59 caagatgttcggcttcgggcaccac 83
>dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031K10, full insert sequence Length = 1765 Score = 248 bits (125), Expect = 1e-62 Identities = 267/315 (84%) Strand = Plus / Plus Query: 122 cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 181 ||||||||||| |||||| ||| ||||| |||||| ||||||| ||||| || | || Sbjct: 165 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 224 Query: 182 cgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggacatgcgctt 241 ||| |||||||| |||||| |||||| |||||||||| ||||||||||||||| Sbjct: 225 cgtcctcgccccgaccaacccgcgcgacgagcaccagcactggtacaaggacatgcgctt 284 Query: 242 cagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaacaaggccac 301 |||| ||| |||||||||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 285 cagcgccaagatcaaggacgaggagggcaacccggcgttcgcgctcgtcaacaaggccac 344 Query: 302 cggcctcgccgtcaagcactccatcggccagtcccaccccgtgaagctggtgccgttcaa 361 |||||||||| ||||||||||| |||||||| |||||| |||||||||| ||||||||| Sbjct: 345 cggcctcgccatcaagcactccctcggccagggccacccggtgaagctggcgccgttcaa 404 Query: 362 cccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggcaagggctt 421 ||||| |||| ||||| |||||||||||||||||||||| |||||||||||| |||| Sbjct: 405 cccggagtacccggacgagtcggtgctgtggacggagagcggcgacgtgggcaagagctt 464 Query: 422 ncgctgcatncgcat 436 |||||||| ||||| Sbjct: 465 ccgctgcatccgcat 479 Score = 95.6 bits (48), Expect = 1e-16 Identities = 178/222 (80%) Strand = Plus / Plus Query: 215 ccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgcc 274 |||||||||| ||||||||||| | ||||| || | |||||||||| || ||| || Sbjct: 765 ccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaaggctaccc 824 Query: 275 ggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtc 334 |||||||| |||||||||| || ||||||| ||| ||||||||||| ||| | Sbjct: 825 cgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcccaaggcgaagg 884 Query: 335 ccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggac 394 |||||| |||||||||||||||| |||||| | ||| |||||| ||||||||||||||| Sbjct: 885 ccaccctgtgaagctggtgccgtacaaccccggataccaggacgagtcggtgctgtggac 944 Query: 395 ggagagcaaggacgtgggcaagggcttncgctgcatncgcat 436 ||||||| ||||| || | ||||| |||||||| ||||| Sbjct: 945 ggagagccgcgacgtcgggcacggcttccgctgcatccgcat 986 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 caagatgttcgggttcgggcaccac 80 |||||||||||| |||||||||||| Sbjct: 72 caagatgttcggcttcgggcaccac 96
>gb|BT018342.1| Zea mays clone EL01T0403C03.c mRNA sequence Length = 690 Score = 206 bits (104), Expect = 4e-50 Identities = 153/170 (90%) Strand = Plus / Plus Query: 267 ggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatc 326 ||||||||||| ||||||||||||||||||||||| || |||||| ||||||||||| || Sbjct: 16 ggcatgccggcgttcgcgctcgtcaacaaggccacggggctcgccatcaagcactccctc 75 Query: 327 ggccagtcccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtg 386 |||||||||||||| || ||||| | ||| |||| ||||| | ||||||||||||||| Sbjct: 76 ggccagtcccacccggtcaagctcgcgcctttcagcccggaccaggaggacgcgtcggtg 135 Query: 387 ctgtggacggagagcaaggacgtgggcaagggcttncgctgcatncgcat 436 ||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 136 ctgtggacggagagcaaggacgtgggcaagggcttccgctgcatccgcat 185
>gb|BT018000.1| Zea mays clone EL01N0526G03.c mRNA sequence Length = 842 Score = 196 bits (99), Expect = 4e-47 Identities = 277/337 (82%) Strand = Plus / Plus Query: 100 cggcgtccggccccaaccagatcttcaagatctactgccgggcctccgaggactactgcc 159 ||||||| |||||||||||| | |||||||||| |||||| ||| |||| ||||||||| Sbjct: 31 cggcgtcgggccccaaccaggtgttcaagatcttctgccgcgccaacgagaactactgcc 90 Query: 160 tcgccgtccgcgacggcgaggtcgtgctcgcccccgtcaaccccaaggacgagacccagc 219 | |||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||| Sbjct: 91 tggccgtccgcgacggcgccgtcgtgctggccccggtcaaccccaaggacgaccaccagc 150 Query: 220 actggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccggcct 279 ||||| |||||||||||||||||||||| || |||||| |||||| ||||||| Sbjct: 151 actggtacaaggacatgcgcttcagcacccgggtgcgggacgaggagggctacccggcct 210 Query: 280 tcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccacc 339 |||||||||||||||||| ||||||| || |||||||||||| || ||| ||||| Sbjct: 211 tcgcgctcgtcaacaaggtcaccggcgaggcgctcaagcactccacggggcagggccacc 270 Query: 340 ccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggaga 399 |||| ||||| ||| | |||||||| ||| |||||| ||| ||||| ||||| |||| Sbjct: 271 ccgtcaagctcgtgttctacaacccggactaccaggacgagtccgtgctctggaccgaga 330 Query: 400 gcaaggacgtgggcaagggcttncgctgcatncgcat 436 || ||||| ||||| ||||| |||||| | ||||| Sbjct: 331 gccgcgacgtcggcaacggcttccgctgcgtccgcat 367
>ref|XM_479570.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1209 Score = 172 bits (87), Expect = 6e-40 Identities = 188/221 (85%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 216 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 275 ||||||||| |||||||||||| |||||| | || |||||||| |||||| ||| Sbjct: 160 cagcactggtacaaggacatgcggcacagcacgagggtgaaggacgaggagggccacccg 219 Query: 276 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 335 || |||||||||||||| |||||||||||||||||||||||||| ||||||| ||| Sbjct: 220 gcgttcgcgctcgtcaatcgcgccaccggcctcgccgtcaagcactcgctcggccaatcc 279 Query: 336 caccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacg 395 |||||||| ||||||||||||| |||||| | |||| |||||| ||||||||||||||| Sbjct: 280 caccccgt-aagctggtgccgtacaacccagagtaccaggacgagtcggtgctgtggacc 338 Query: 396 gagagcaaggacgtgggcaagggcttncgctgcatncgcat 436 |||||||||||||| ||| | ||||| |||||||| ||||| Sbjct: 339 gagagcaaggacgtcggccatggcttccgctgcatccgcat 379 Score = 95.6 bits (48), Expect = 1e-16 Identities = 180/224 (80%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 216 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 275 ||||||||| | ||||||||| | |||||| | | |||||||||| || ||| ||| Sbjct: 844 cagcactgggtgaaggacatgaggcacagcacgagcatcaaggacgaggaaggctacccg 903 Query: 276 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 335 || |||||||| || |||||||||||||| ||| ||||||||||| |||| ||| | Sbjct: 904 gcgttcgcgctggtgaacaaggccaccggggaagccatcaagcactccctcggacagagc 963 Query: 336 caccccgtg---aagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtgg 392 ||||| || | ||||||||| | |||||||| |||| ||||| ||||||||||||| Sbjct: 964 caccctgtagttaggctggtgccatacaacccggagtacctggacgagtcggtgctgtgg 1023 Query: 393 acggagagcaaggacgtgggcaagggcttncgctgcatncgcat 436 ||||||||||||||||| ||| | ||||| |||||| | ||||| Sbjct: 1024 acggagagcaaggacgtcggccatggcttccgctgcgtccgcat 1067
>gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence Length = 778 Score = 165 bits (83), Expect = 1e-37 Identities = 185/219 (84%) Strand = Plus / Plus Query: 122 cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 181 ||||||||||| |||| |||| ||||| ||||||||| |||||||||||||| | || Sbjct: 151 cttcaagatcttctgcaaggccgacgaggggtactgcctcaccgtccgcgacggcaacgt 210 Query: 182 cgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggacatgcgctt 241 ||||| ||||||| |||||| |||||| |||||||||| ||||||||||||||| Sbjct: 211 ggtgctggcccccgccaacccgcgcgacgagcaccagcactggtacaaggacatgcgctt 270 Query: 242 cagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaacaaggccac 301 ||||||| ||||||||||| ||||||| || || ||||| ||||||||||||||||| Sbjct: 271 cagcacccaggtcaaggacgaggagggcaaccctgcgttcgccctcgtcaacaaggccac 330 Query: 302 cggcctcgccgtcaagcactccatcggccagtcccaccc 340 || |||||| ||||||||||| |||||||||||||||| Sbjct: 331 tgggctcgccatcaagcactccctcggccagtcccaccc 369 Score = 129 bits (65), Expect = 8e-27 Identities = 87/95 (91%) Strand = Plus / Plus Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 ||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| Sbjct: 464 gtgaagctggtgccgttcaacccggagtaccaggacgagtcggtgctgtggacggagagc 523 Query: 402 aaggacgtgggcaagggcttncgctgcatncgcat 436 ||||||||||||||||| |||||||| ||||| Sbjct: 524 ggcgacgtgggcaagggcttccgctgcatccgcat 558 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 caagatgttcgggttcgggcaccac 80 |||||||||||| |||||||||||| Sbjct: 76 caagatgttcggcttcgggcaccac 100
>ref|XM_479573.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 159 bits (80), Expect = 9e-36 Identities = 173/204 (84%) Strand = Plus / Plus Query: 198 aaccccaaggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaag 257 ||||||||||||||| |||||| ||| ||||||||||| | | ||||||| | ||||| Sbjct: 337 aaccccaaggacgagtaccagcattggatcaaggacatgaggtggagcaccagcatcaag 396 Query: 258 gacgaagagggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaag 317 ||||| |||||| || |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 397 gacgaggagggctaccctgccttcgccctcgtcaacaaggccaccggccaggccatcaag 456 Query: 318 cactccatcggccagtcccaccccgtgaagctggtgccgttcaacccggcgtacgaggac 377 |||||| |||||||||| ||||| |||| ||||||||||| |||||||| | |||| Sbjct: 457 cactccctcggccagtcacaccctgtgaggctggtgccgtacaacccggaggtgatggac 516 Query: 378 gcgtcggtgctgtggacggagagc 401 | |||||||||||||||||||||| Sbjct: 517 gagtcggtgctgtggacggagagc 540
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 159 bits (80), Expect = 9e-36 Identities = 116/128 (90%) Strand = Plus / Plus Query: 216 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 275 ||||||||| ||||||||||| | |||||||||| || ||||||| |||||||||||| Sbjct: 28950966 cagcactggttcaaggacatgaggttcagcaccaaggtgaaggacggggagggcatgccg 28951025 Query: 276 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 335 || ||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 28951026 gcgttcgccctcgtcaacaaggccaccggactcgccgtcaagcactccctcggccagtcc 28951085 Query: 336 caccccgt 343 |||||||| Sbjct: 28951086 caccccgt 28951093 Score = 153 bits (77), Expect = 6e-34 Identities = 90/95 (94%) Strand = Plus / Plus Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 28951199 gtgaagcttgtgccgttcaacccggagtacgaggacgcgtcggtgctgtggacggagagc 28951258 Query: 402 aaggacgtgggcaagggcttncgctgcatncgcat 436 |||||||| ||||||||||| |||||||| ||||| Sbjct: 28951259 aaggacgtcggcaagggcttccgctgcatccgcat 28951293 Score = 141 bits (71), Expect = 2e-30 Identities = 138/159 (86%), Gaps = 6/159 (3%) Strand = Plus / Plus Query: 57 aagatgttcgggttcgggcaccaccacaaggaccaggcgccggcggcg---tccggcccc 113 |||||||| |||||||||||||||||||| |||||| ||||||||| || | ||| Sbjct: 28950715 aagatgtttgggttcgggcaccaccacaa---ccaggcaccggcggcgccgtcggacccg 28950771 Query: 114 aaccagatcttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgac 173 ||||||||||||||||||| |||||| ||| |||| ||||||||||| ||||||||||| Sbjct: 28950772 aaccagatcttcaagatcttctgccgcgccaacgagaactactgcctcaccgtccgcgac 28950831 Query: 174 ggcgaggtcgtgctcgcccccgtcaaccccaaggacgag 212 ||| ||||| ||||||||||||||||||||||||||| Sbjct: 28950832 agcgccgtcgtcctcgcccccgtcaaccccaaggacgag 28950870 Score = 117 bits (59), Expect = 3e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 198 aaccccaaggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaag 257 ||||||||||||||| |||||| ||| ||||||||||| | | ||||||| | ||||| Sbjct: 28955632 aaccccaaggacgagtaccagcattggatcaaggacatgaggtggagcaccagcatcaag 28955691 Query: 258 gacgaagagggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaag 317 ||||| |||||| || |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 28955692 gacgaggagggctaccctgccttcgccctcgtcaacaaggccaccggccaggccatcaag 28955751 Query: 318 cactccatcggccagtcccaccc 340 |||||| |||||||||| ||||| Sbjct: 28955752 cactccctcggccagtcacaccc 28955774 Score = 105 bits (53), Expect = 1e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 ||||||||||| || | |||||| | |||| |||||| ||| |||||||||||||||||| Sbjct: 28951886 gtgaagctggttccctacaacccagagtaccaggacgagtctgtgctgtggacggagagc 28951945 Query: 402 aaggacgtgggcaagggcttncgctgcatncgcat 436 ||||| |||||||||||||| |||||||| ||||| Sbjct: 28951946 aaggatgtgggcaagggcttccgctgcatccgcat 28951980 Score = 105 bits (53), Expect = 1e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 |||||||||||||||| |||||| | |||| |||||| ||||||||||||||| |||||| Sbjct: 28939674 gtgaagctggtgccgtacaacccagagtaccaggacgagtcggtgctgtggaccgagagc 28939733 Query: 402 aaggacgtgggcaagggcttncgctgcatncgcat 436 |||||||| ||| | ||||| |||||||| ||||| Sbjct: 28939734 aaggacgtcggccatggcttccgctgcatccgcat 28939768 Score = 87.7 bits (44), Expect = 3e-14 Identities = 78/90 (86%) Strand = Plus / Plus Query: 347 gctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagcaagga 406 ||||||||| | |||||||| |||| ||||| ||||||||||||||||||||||||||| Sbjct: 28940681 gctggtgccatacaacccggagtacctggacgagtcggtgctgtggacggagagcaagga 28940740 Query: 407 cgtgggcaagggcttncgctgcatncgcat 436 ||| ||| | ||||| |||||| | ||||| Sbjct: 28940741 cgtcggccatggcttccgctgcgtccgcat 28940770 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 216 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 275 ||||||||| |||||||||||| |||||| | || |||||||| |||||| ||| Sbjct: 28939449 cagcactggtacaaggacatgcggcacagcacgagggtgaaggacgaggagggccacccg 28939508 Query: 276 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 335 || |||||||||||||| |||||||||||||||||||||||||| ||||||| ||| Sbjct: 28939509 gcgttcgcgctcgtcaatcgcgccaccggcctcgccgtcaagcactcgctcggccaatcc 28939568 Query: 336 caccccgt 343 |||||||| Sbjct: 28939569 caccccgt 28939576 Score = 50.1 bits (25), Expect = 0.006 Identities = 61/73 (83%) Strand = Plus / Plus Query: 273 ccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccag 332 ||||| |||||||| |||||||||| ||||||| ||| |||||||||||| ||| ||| Sbjct: 28951727 ccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaagcactccaccggacag 28951786 Query: 333 tcccaccccgtga 345 |||||| |||| Sbjct: 28951787 ggccacccggtga 28951799 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 374 ggacgcgtcggtgctgtggacggagagc 401 ||||| |||||||||||||||||||||| Sbjct: 28955890 ggacgagtcggtgctgtggacggagagc 28955917 Score = 46.1 bits (23), Expect = 0.095 Identities = 29/31 (93%) Strand = Plus / Plus Query: 146 cgaggactactgcctcgccgtccgcgacggc 176 |||||||||||||||| |||||||| ||||| Sbjct: 28951522 cgaggactactgcctcaccgtccgcaacggc 28951552 Score = 42.1 bits (21), Expect = 1.5 Identities = 72/89 (80%) Strand = Plus / Plus Query: 216 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 275 ||||||||| | ||||||||| | |||||| | | |||||||||| || ||| ||| Sbjct: 28940335 cagcactgggtgaaggacatgaggcacagcacgagcatcaaggacgaggaaggctacccg 28940394 Query: 276 gccttcgcgctcgtcaacaaggccaccgg 304 || |||||||| || |||||||||||||| Sbjct: 28940395 gcgttcgcgctggtgaacaaggccaccgg 28940423
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 159 bits (80), Expect = 9e-36 Identities = 116/128 (90%) Strand = Plus / Plus Query: 216 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 275 ||||||||| ||||||||||| | |||||||||| || ||||||| |||||||||||| Sbjct: 68503 cagcactggttcaaggacatgaggttcagcaccaaggtgaaggacggggagggcatgccg 68562 Query: 276 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 335 || ||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 68563 gcgttcgccctcgtcaacaaggccaccggactcgccgtcaagcactccctcggccagtcc 68622 Query: 336 caccccgt 343 |||||||| Sbjct: 68623 caccccgt 68630 Score = 153 bits (77), Expect = 6e-34 Identities = 90/95 (94%) Strand = Plus / Plus Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 68736 gtgaagcttgtgccgttcaacccggagtacgaggacgcgtcggtgctgtggacggagagc 68795 Query: 402 aaggacgtgggcaagggcttncgctgcatncgcat 436 |||||||| ||||||||||| |||||||| ||||| Sbjct: 68796 aaggacgtcggcaagggcttccgctgcatccgcat 68830 Score = 141 bits (71), Expect = 2e-30 Identities = 138/159 (86%), Gaps = 6/159 (3%) Strand = Plus / Plus Query: 57 aagatgttcgggttcgggcaccaccacaaggaccaggcgccggcggcg---tccggcccc 113 |||||||| |||||||||||||||||||| |||||| ||||||||| || | ||| Sbjct: 68252 aagatgtttgggttcgggcaccaccacaa---ccaggcaccggcggcgccgtcggacccg 68308 Query: 114 aaccagatcttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgac 173 ||||||||||||||||||| |||||| ||| |||| ||||||||||| ||||||||||| Sbjct: 68309 aaccagatcttcaagatcttctgccgcgccaacgagaactactgcctcaccgtccgcgac 68368 Query: 174 ggcgaggtcgtgctcgcccccgtcaaccccaaggacgag 212 ||| ||||| ||||||||||||||||||||||||||| Sbjct: 68369 agcgccgtcgtcctcgcccccgtcaaccccaaggacgag 68407 Score = 117 bits (59), Expect = 3e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 198 aaccccaaggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaag 257 ||||||||||||||| |||||| ||| ||||||||||| | | ||||||| | ||||| Sbjct: 73169 aaccccaaggacgagtaccagcattggatcaaggacatgaggtggagcaccagcatcaag 73228 Query: 258 gacgaagagggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaag 317 ||||| |||||| || |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 73229 gacgaggagggctaccctgccttcgccctcgtcaacaaggccaccggccaggccatcaag 73288 Query: 318 cactccatcggccagtcccaccc 340 |||||| |||||||||| ||||| Sbjct: 73289 cactccctcggccagtcacaccc 73311 Score = 105 bits (53), Expect = 1e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 ||||||||||| || | |||||| | |||| |||||| ||| |||||||||||||||||| Sbjct: 69423 gtgaagctggttccctacaacccagagtaccaggacgagtctgtgctgtggacggagagc 69482 Query: 402 aaggacgtgggcaagggcttncgctgcatncgcat 436 ||||| |||||||||||||| |||||||| ||||| Sbjct: 69483 aaggatgtgggcaagggcttccgctgcatccgcat 69517 Score = 105 bits (53), Expect = 1e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 |||||||||||||||| |||||| | |||| |||||| ||||||||||||||| |||||| Sbjct: 57211 gtgaagctggtgccgtacaacccagagtaccaggacgagtcggtgctgtggaccgagagc 57270 Query: 402 aaggacgtgggcaagggcttncgctgcatncgcat 436 |||||||| ||| | ||||| |||||||| ||||| Sbjct: 57271 aaggacgtcggccatggcttccgctgcatccgcat 57305 Score = 87.7 bits (44), Expect = 3e-14 Identities = 78/90 (86%) Strand = Plus / Plus Query: 347 gctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagcaagga 406 ||||||||| | |||||||| |||| ||||| ||||||||||||||||||||||||||| Sbjct: 58218 gctggtgccatacaacccggagtacctggacgagtcggtgctgtggacggagagcaagga 58277 Query: 407 cgtgggcaagggcttncgctgcatncgcat 436 ||| ||| | ||||| |||||| | ||||| Sbjct: 58278 cgtcggccatggcttccgctgcgtccgcat 58307 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 216 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 275 ||||||||| |||||||||||| |||||| | || |||||||| |||||| ||| Sbjct: 56986 cagcactggtacaaggacatgcggcacagcacgagggtgaaggacgaggagggccacccg 57045 Query: 276 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 335 || |||||||||||||| |||||||||||||||||||||||||| ||||||| ||| Sbjct: 57046 gcgttcgcgctcgtcaatcgcgccaccggcctcgccgtcaagcactcgctcggccaatcc 57105 Query: 336 caccccgt 343 |||||||| Sbjct: 57106 caccccgt 57113 Score = 50.1 bits (25), Expect = 0.006 Identities = 61/73 (83%) Strand = Plus / Plus Query: 273 ccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccag 332 ||||| |||||||| |||||||||| ||||||| ||| |||||||||||| ||| ||| Sbjct: 69264 ccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaagcactccaccggacag 69323 Query: 333 tcccaccccgtga 345 |||||| |||| Sbjct: 69324 ggccacccggtga 69336 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 374 ggacgcgtcggtgctgtggacggagagc 401 ||||| |||||||||||||||||||||| Sbjct: 73427 ggacgagtcggtgctgtggacggagagc 73454 Score = 46.1 bits (23), Expect = 0.095 Identities = 29/31 (93%) Strand = Plus / Plus Query: 146 cgaggactactgcctcgccgtccgcgacggc 176 |||||||||||||||| |||||||| ||||| Sbjct: 69059 cgaggactactgcctcaccgtccgcaacggc 69089 Score = 42.1 bits (21), Expect = 1.5 Identities = 72/89 (80%) Strand = Plus / Plus Query: 216 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 275 ||||||||| | ||||||||| | |||||| | | |||||||||| || ||| ||| Sbjct: 57872 cagcactgggtgaaggacatgaggcacagcacgagcatcaaggacgaggaaggctacccg 57931 Query: 276 gccttcgcgctcgtcaacaaggccaccgg 304 || |||||||| || |||||||||||||| Sbjct: 57932 gcgttcgcgctggtgaacaaggccaccgg 57960
>emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene Length = 2101 Score = 159 bits (80), Expect = 9e-36 Identities = 116/128 (90%) Strand = Plus / Plus Query: 216 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 275 ||||||||| ||||||||||| | |||||||||| || ||||||| |||||||||||| Sbjct: 893 cagcactggttcaaggacatgaggttcagcaccaaggtgaaggacggggagggcatgccg 952 Query: 276 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 335 || ||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 953 gcgttcgccctcgtcaacaaggccaccggactcgccgtcaagcactccctcggccagtcc 1012 Query: 336 caccccgt 343 |||||||| Sbjct: 1013 caccccgt 1020 Score = 153 bits (77), Expect = 6e-34 Identities = 90/95 (94%) Strand = Plus / Plus Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1126 gtgaagcttgtgccgttcaacccggagtacgaggacgcgtcggtgctgtggacggagagc 1185 Query: 402 aaggacgtgggcaagggcttncgctgcatncgcat 436 |||||||| ||||||||||| |||||||| ||||| Sbjct: 1186 aaggacgtcggcaagggcttccgctgcatccgcat 1220 Score = 141 bits (71), Expect = 2e-30 Identities = 138/159 (86%), Gaps = 6/159 (3%) Strand = Plus / Plus Query: 57 aagatgttcgggttcgggcaccaccacaaggaccaggcgccggcggcg---tccggcccc 113 |||||||| |||||||||||||||||||| |||||| ||||||||| || | ||| Sbjct: 642 aagatgtttgggttcgggcaccaccacaa---ccaggcaccggcggcgccgtcggacccg 698 Query: 114 aaccagatcttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgac 173 ||||||||||||||||||| |||||| ||| |||| ||||||||||| ||||||||||| Sbjct: 699 aaccagatcttcaagatcttctgccgcgccaacgagaactactgcctcaccgtccgcgac 758 Query: 174 ggcgaggtcgtgctcgcccccgtcaaccccaaggacgag 212 ||| ||||| ||||||||||||||||||||||||||| Sbjct: 759 agcgccgtcgtcctcgcccccgtcaaccccaaggacgag 797 Score = 81.8 bits (41), Expect = 2e-12 Identities = 81/95 (85%) Strand = Plus / Plus Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 ||||||||||| || | |||||| | |||| |||||| ||| || ||||||| ||||||| Sbjct: 1813 gtgaagctggttccctacaacccagagtaccaggacgagtctgtactgtggagggagagc 1872 Query: 402 aaggacgtgggcaagggcttncgctgcatncgcat 436 ||| | |||||||||||||| |||||||| ||||| Sbjct: 1873 aagcatgtgggcaagggcttccgctgcatccgcat 1907 Score = 50.1 bits (25), Expect = 0.006 Identities = 61/73 (83%) Strand = Plus / Plus Query: 273 ccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccag 332 ||||| |||||||| |||||||||| ||||||| ||| |||||||||||| ||| ||| Sbjct: 1654 ccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaagcactccaccggacag 1713 Query: 333 tcccaccccgtga 345 |||||| |||| Sbjct: 1714 ggccacccggtga 1726 Score = 46.1 bits (23), Expect = 0.095 Identities = 29/31 (93%) Strand = Plus / Plus Query: 146 cgaggactactgcctcgccgtccgcgacggc 176 |||||||||||||||| |||||||| ||||| Sbjct: 1449 cgaggactactgcctcaccgtccgcaacggc 1479
>dbj|AK072989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145K15, full insert sequence Length = 987 Score = 159 bits (80), Expect = 9e-36 Identities = 173/204 (84%) Strand = Plus / Plus Query: 198 aaccccaaggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaag 257 ||||||||||||||| |||||| ||| ||||||||||| | | ||||||| | ||||| Sbjct: 336 aaccccaaggacgagtaccagcattggatcaaggacatgaggtggagcaccagcatcaag 395 Query: 258 gacgaagagggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaag 317 ||||| |||||| || |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 396 gacgaggagggctaccctgccttcgccctcgtcaacaaggccaccggccaggccatcaag 455 Query: 318 cactccatcggccagtcccaccccgtgaagctggtgccgttcaacccggcgtacgaggac 377 |||||| |||||||||| ||||| |||| ||||||||||| |||||||| | |||| Sbjct: 456 cactccctcggccagtcacaccctgtgaggctggtgccgtacaacccggaggtgatggac 515 Query: 378 gcgtcggtgctgtggacggagagc 401 | |||||||||||||||||||||| Sbjct: 516 gagtcggtgctgtggacggagagc 539
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 149 bits (75), Expect = 9e-33 Identities = 177/211 (83%) Strand = Plus / Minus Query: 122 cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 181 ||||||||||| |||||| ||| ||||| |||||| ||||||| ||||| || | || Sbjct: 11932527 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 11932468 Query: 182 cgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggacatgcgctt 241 ||| |||||||| |||||| |||||| |||||||||| ||||||||||||||| Sbjct: 11932467 cgtcctcgccccgaccaacccgcgcgacgagcaccagcactggtacaaggacatgcgctt 11932408 Query: 242 cagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaacaaggccac 301 |||| ||| |||||||||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 11932407 cagcgccaagatcaaggacgaggagggcaacccggcgttcgcgctcgtcaacaaggccac 11932348 Query: 302 cggcctcgccgtcaagcactccatcggccag 332 |||||||||| ||||||||||| |||||||| Sbjct: 11932347 cggcctcgccatcaagcactccctcggccag 11932317 Score = 105 bits (53), Expect = 1e-19 Identities = 84/95 (88%) Strand = Plus / Minus Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 |||||||||| |||||||||||||| |||| ||||| |||||||||||||||||||||| Sbjct: 11932198 gtgaagctggcgccgttcaacccggagtacccggacgagtcggtgctgtggacggagagc 11932139 Query: 402 aaggacgtgggcaagggcttncgctgcatncgcat 436 |||||||||||| |||| |||||||| ||||| Sbjct: 11932138 ggcgacgtgggcaagagcttccgctgcatccgcat 11932104 Score = 73.8 bits (37), Expect = 4e-10 Identities = 80/95 (84%) Strand = Plus / Minus Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 |||||||||||||||| |||||| | ||| |||||| |||||||||||||||||||||| Sbjct: 11931582 gtgaagctggtgccgtacaaccccggataccaggacgagtcggtgctgtggacggagagc 11931523 Query: 402 aaggacgtgggcaagggcttncgctgcatncgcat 436 ||||| || | ||||| |||||||| ||||| Sbjct: 11931522 cgcgacgtcgggcacggcttccgctgcatccgcat 11931488 Score = 50.1 bits (25), Expect = 0.006 Identities = 88/109 (80%) Strand = Plus / Minus Query: 215 ccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgcc 274 |||||||||| ||||||||||| | ||||| || | |||||||||| || ||| || Sbjct: 11931818 ccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaaggctaccc 11931759 Query: 275 ggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactcc 323 |||||||| |||||||||| || ||||||| ||| ||||||||||| Sbjct: 11931758 cgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcc 11931710 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 caagatgttcgggttcgggcaccac 80 |||||||||||| |||||||||||| Sbjct: 11932620 caagatgttcggcttcgggcaccac 11932596 Score = 40.1 bits (20), Expect = 5.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 279 ttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactc 322 ||||||||||| || |||||||||||| ||| |||||||||| Sbjct: 11852578 ttcgcgctcgtgaataaggccaccggcgaagccatcaagcactc 11852621
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 149 bits (75), Expect = 9e-33 Identities = 177/211 (83%) Strand = Plus / Minus Query: 122 cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 181 ||||||||||| |||||| ||| ||||| |||||| ||||||| ||||| || | || Sbjct: 11929290 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 11929231 Query: 182 cgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggacatgcgctt 241 ||| |||||||| |||||| |||||| |||||||||| ||||||||||||||| Sbjct: 11929230 cgtcctcgccccgaccaacccgcgcgacgagcaccagcactggtacaaggacatgcgctt 11929171 Query: 242 cagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaacaaggccac 301 |||| ||| |||||||||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 11929170 cagcgccaagatcaaggacgaggagggcaacccggcgttcgcgctcgtcaacaaggccac 11929111 Query: 302 cggcctcgccgtcaagcactccatcggccag 332 |||||||||| ||||||||||| |||||||| Sbjct: 11929110 cggcctcgccatcaagcactccctcggccag 11929080 Score = 105 bits (53), Expect = 1e-19 Identities = 84/95 (88%) Strand = Plus / Minus Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 |||||||||| |||||||||||||| |||| ||||| |||||||||||||||||||||| Sbjct: 11928961 gtgaagctggcgccgttcaacccggagtacccggacgagtcggtgctgtggacggagagc 11928902 Query: 402 aaggacgtgggcaagggcttncgctgcatncgcat 436 |||||||||||| |||| |||||||| ||||| Sbjct: 11928901 ggcgacgtgggcaagagcttccgctgcatccgcat 11928867 Score = 73.8 bits (37), Expect = 4e-10 Identities = 80/95 (84%) Strand = Plus / Minus Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 |||||||||||||||| |||||| | ||| |||||| |||||||||||||||||||||| Sbjct: 11928345 gtgaagctggtgccgtacaaccccggataccaggacgagtcggtgctgtggacggagagc 11928286 Query: 402 aaggacgtgggcaagggcttncgctgcatncgcat 436 ||||| || | ||||| |||||||| ||||| Sbjct: 11928285 cgcgacgtcgggcacggcttccgctgcatccgcat 11928251 Score = 50.1 bits (25), Expect = 0.006 Identities = 88/109 (80%) Strand = Plus / Minus Query: 215 ccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgcc 274 |||||||||| ||||||||||| | ||||| || | |||||||||| || ||| || Sbjct: 11928581 ccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaaggctaccc 11928522 Query: 275 ggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactcc 323 |||||||| |||||||||| || ||||||| ||| ||||||||||| Sbjct: 11928521 cgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcc 11928473 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 caagatgttcgggttcgggcaccac 80 |||||||||||| |||||||||||| Sbjct: 11929383 caagatgttcggcttcgggcaccac 11929359 Score = 40.1 bits (20), Expect = 5.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 279 ttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactc 322 ||||||||||| || |||||||||||| ||| |||||||||| Sbjct: 11849341 ttcgcgctcgtgaataaggccaccggcgaagccatcaagcactc 11849384
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 149 bits (75), Expect = 9e-33 Identities = 177/211 (83%) Strand = Plus / Minus Query: 122 cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 181 ||||||||||| |||||| ||| ||||| |||||| ||||||| ||||| || | || Sbjct: 33789 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 33730 Query: 182 cgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggacatgcgctt 241 ||| |||||||| |||||| |||||| |||||||||| ||||||||||||||| Sbjct: 33729 cgtcctcgccccgaccaacccgcgcgacgagcaccagcactggtacaaggacatgcgctt 33670 Query: 242 cagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaacaaggccac 301 |||| ||| |||||||||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 33669 cagcgccaagatcaaggacgaggagggcaacccggcgttcgcgctcgtcaacaaggccac 33610 Query: 302 cggcctcgccgtcaagcactccatcggccag 332 |||||||||| ||||||||||| |||||||| Sbjct: 33609 cggcctcgccatcaagcactccctcggccag 33579 Score = 105 bits (53), Expect = 1e-19 Identities = 84/95 (88%) Strand = Plus / Minus Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 |||||||||| |||||||||||||| |||| ||||| |||||||||||||||||||||| Sbjct: 33460 gtgaagctggcgccgttcaacccggagtacccggacgagtcggtgctgtggacggagagc 33401 Query: 402 aaggacgtgggcaagggcttncgctgcatncgcat 436 |||||||||||| |||| |||||||| ||||| Sbjct: 33400 ggcgacgtgggcaagagcttccgctgcatccgcat 33366 Score = 73.8 bits (37), Expect = 4e-10 Identities = 80/95 (84%) Strand = Plus / Minus Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 |||||||||||||||| |||||| | ||| |||||| |||||||||||||||||||||| Sbjct: 32844 gtgaagctggtgccgtacaaccccggataccaggacgagtcggtgctgtggacggagagc 32785 Query: 402 aaggacgtgggcaagggcttncgctgcatncgcat 436 ||||| || | ||||| |||||||| ||||| Sbjct: 32784 cgcgacgtcgggcacggcttccgctgcatccgcat 32750 Score = 50.1 bits (25), Expect = 0.006 Identities = 88/109 (80%) Strand = Plus / Minus Query: 215 ccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgcc 274 |||||||||| ||||||||||| | ||||| || | |||||||||| || ||| || Sbjct: 33080 ccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaaggctaccc 33021 Query: 275 ggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactcc 323 |||||||| |||||||||| || ||||||| ||| ||||||||||| Sbjct: 33020 cgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcc 32972 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 caagatgttcgggttcgggcaccac 80 |||||||||||| |||||||||||| Sbjct: 33882 caagatgttcggcttcgggcaccac 33858
>gb|DQ022951.1| Triticum aestivum stress responsive protein mRNA, complete cds Length = 846 Score = 145 bits (73), Expect = 1e-31 Identities = 208/253 (82%) Strand = Plus / Plus Query: 163 ccgtccgcgacggcgaggtcgtgctcgcccccgtcaaccccaaggacgagacccagcact 222 |||| ||| ||||| |||| ||||| || || | ||||||||||||||| |||||||| Sbjct: 198 ccgtgcgcaacggcaaggtggtgctggcgccggccaaccccaaggacgactaccagcact 257 Query: 223 ggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccggccttcg 282 || ||||||||||| | | ||||||| | |||||||||| |||||| || ||||||| Sbjct: 258 ggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctaccccgccttcg 317 Query: 283 cgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccaccccg 342 | | || |||||||||||||| | ||| ||||||||||| |||||||||| ||||| | Sbjct: 318 ccatggtgaacaaggccaccgggcaggccatcaagcactccctcggccagtcacaccctg 377 Query: 343 tgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagca 402 || |||||||||| |||||| | ||| ||||| ||||||||||||||||||||||| Sbjct: 378 tgcgtctggtgccgtacaacccagactacctggacgagtcggtgctgtggacggagagca 437 Query: 403 aggacgtgggcaa 415 |||||||||||| Sbjct: 438 gggacgtgggcaa 450
>gb|BT016654.1| Zea mays clone Contig487 mRNA sequence Length = 905 Score = 119 bits (60), Expect = 8e-24 Identities = 181/222 (81%) Strand = Plus / Plus Query: 215 ccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgcc 274 |||||||||| |||||||||||||| ||||| || |||||||||||| || || || Sbjct: 202 ccagcactggatcaaggacatgcgccacagcaacagcgtcaaggacgaggaagggtaccc 261 Query: 275 ggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtc 334 |||||||||||||||||||| || ||||||| ||| ||||||||||| ||| || Sbjct: 262 ggccttcgcgctcgtcaacagggtcaccggcgaggccatcaagcactcccagggcgaggg 321 Query: 335 ccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggac 394 |||||| || ||||||||||| | |||||| | ||| |||||| ||||||||||||||| Sbjct: 322 ccacccggtcaagctggtgccctacaaccccggctaccaggacgagtcggtgctgtggac 381 Query: 395 ggagagcaaggacgtgggcaagggcttncgctgcatncgcat 436 ||||||| ||||| ||| | ||||| |||||| | ||||| Sbjct: 382 ggagagccgcgacgtcggccacggcttccgctgcgtccgcat 423
>emb|Y08988.1|OSR40G3 O.sativa osr40g3 gene Length = 1531 Score = 117 bits (59), Expect = 3e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 198 aaccccaaggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaag 257 ||||||||||||||| |||||| ||| ||||||||||| | | ||||||| | ||||| Sbjct: 872 aaccccaaggacgagtaccagcattggatcaaggacatgaggtggagcaccagcatcaag 931 Query: 258 gacgaagagggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaag 317 ||||| |||||| || |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 932 gacgaggagggctaccctgccttcgccctcgtcaacaaggccaccggccaggccatcaag 991 Query: 318 cactccatcggccagtcccaccc 340 |||||| |||||||||| ||||| Sbjct: 992 cactccctcggccagtcacaccc 1014 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 374 ggacgcgtcggtgctgtggacggagagc 401 ||||| |||||||||||||||||||||| Sbjct: 1130 ggacgagtcggtgctgtggacggagagc 1157
>gb|BT018086.1| Zea mays clone EL01N0552C09.c mRNA sequence Length = 666 Score = 91.7 bits (46), Expect = 2e-15 Identities = 215/272 (79%) Strand = Plus / Plus Query: 165 gtccgcgacggcgaggtcgtgctcgcccccgtcaaccccaaggacgagacccagcactgg 224 ||||||||||| |||| ||||| || || | ||||||||||||||| |||||||||| Sbjct: 29 gtccgcgacgggaaggtggtgctggcgccggcgaaccccaaggacgagtaccagcactgg 88 Query: 225 ctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccggccttcgcg 284 ||||||||||||| | ||||| | | |||||||||| || || ||||| |||||| Sbjct: 89 atcaaggacatgcggtggagcacgagcatcaaggacgaggaaggttacccggcgttcgcg 148 Query: 285 ctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccaccccgtg 344 || || |||||||| ||||| ||| |||||||||| | || ||||||||||| ||| Sbjct: 149 ctggtgaacaaggcgaccggggaggccatcaagcactcgctggggcagtcccacccggtg 208 Query: 345 aagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagcaag 404 |||||||| | |||||||| | ||||| |||||||||||||||||||||| Sbjct: 209 cgcctggtgccctacaacccggactttttggacgagtcggtgctgtggacggagagccgc 268 Query: 405 gacgtgggcaagggcttncgctgcatncgcat 436 ||||| ||||| ||||| |||||| | ||||| Sbjct: 269 gacgtcggcaacggcttccgctgcgtccgcat 300
>ref|NM_183466.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1093 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 282 gcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccacccc 341 |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 520 gcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcccaccct 579 Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 || |||||| | ||| || | |||| ||||| ||| |||||||||||||||||| Sbjct: 580 gtccgtttggtgcgctacaatccagagtacatggacgagtctgtgctgtggacggagagc 639 Query: 402 aaggacgt 409 | |||||| Sbjct: 640 agggacgt 647
>dbj|AK104820.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A11, full insert sequence Length = 1093 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 282 gcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccacccc 341 |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 520 gcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcccaccct 579 Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 || |||||| | ||| || | |||| ||||| ||| |||||||||||||||||| Sbjct: 580 gtccgtttggtgcgctacaatccagagtacatggacgagtctgtgctgtggacggagagc 639 Query: 402 aaggacgt 409 | |||||| Sbjct: 640 agggacgt 647
>dbj|AK104555.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-F10, full insert sequence Length = 1088 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 282 gcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccacccc 341 |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 517 gcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcccaccct 576 Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 || |||||| | ||| || | |||| ||||| ||| |||||||||||||||||| Sbjct: 577 gtccgtttggtgcgctacaatccagagtacatggacgagtctgtgctgtggacggagagc 636 Query: 402 aaggacgt 409 | |||||| Sbjct: 637 agggacgt 644
>dbj|AK071375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095C18, full insert sequence Length = 1392 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 282 gcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccacccc 341 |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 803 gcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcccaccct 862 Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 || |||||| | ||| || | |||| ||||| ||| |||||||||||||||||| Sbjct: 863 gtccgtttggtgcgctacaatccagagtacatggacgagtctgtgctgtggacggagagc 922 Query: 402 aaggacgt 409 | |||||| Sbjct: 923 agggacgt 930
>dbj|AK060132.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C04, full insert sequence Length = 1220 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 282 gcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccacccc 341 |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 560 gcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcccaccct 619 Query: 342 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 401 || |||||| | ||| || | |||| ||||| ||| |||||||||||||||||| Sbjct: 620 gtccgtttggtgcgctacaatccagagtacatggacgagtctgtgctgtggacggagagc 679 Query: 402 aaggacgt 409 | |||||| Sbjct: 680 agggacgt 687
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 282 gcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccaccc 340 |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 226805 gcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcccaccc 226863 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 374 ggacgcgtcggtgctgtggacggagagcaaggacgt 409 ||||| ||| ||||||||||||||||||| |||||| Sbjct: 227589 ggacgagtctgtgctgtggacggagagcagggacgt 227624 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ggcgccggcggcgtccggcc 111 |||||||||||||||||||| Sbjct: 32027456 ggcgccggcggcgtccggcc 32027437
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 282 gcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccaccc 340 |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 68475 gcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcccaccc 68533 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 374 ggacgcgtcggtgctgtggacggagagcaaggacgt 409 ||||| ||| ||||||||||||||||||| |||||| Sbjct: 69259 ggacgagtctgtgctgtggacggagagcagggacgt 69294
>gb|BT017211.1| Zea mays clone EL01N0372B08.c mRNA sequence Length = 567 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 345 aagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggaga 399 ||||||||||| | |||||| | ||| |||||| |||||||||||||||||||| Sbjct: 16 aagctggtgccctacaaccccggttaccaggacgagtcggtgctgtggacggaga 70
>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0015J03, complete sequence Length = 165933 Score = 46.1 bits (23), Expect = 0.095 Identities = 58/70 (82%) Strand = Plus / Minus Query: 359 caacccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggcaaggg 418 |||||||| ||| |||| | ||||||||||||| ||||||||||| || | ||| | || Sbjct: 162069 caacccggagtaacaggatgagtcggtgctgtgggcggagagcaagaacatcggccacgg 162010 Query: 419 cttncgctgc 428 ||| |||||| Sbjct: 162009 cttccgctgc 162000 Score = 44.1 bits (22), Expect = 0.38 Identities = 43/50 (86%) Strand = Plus / Minus Query: 279 ttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcgg 328 |||||||| || |||||||||||| ||| ||| ||||||||||| |||| Sbjct: 162377 ttcgcgctggtgaacaaggccaccagccaagccatcaagcactccctcgg 162328
>gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081F12 from chromosome 10, complete sequence Length = 128388 Score = 46.1 bits (23), Expect = 0.095 Identities = 58/70 (82%) Strand = Plus / Minus Query: 359 caacccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggcaaggg 418 |||||||| ||| |||| | ||||||||||||| ||||||||||| || | ||| | || Sbjct: 56136 caacccggagtaacaggatgagtcggtgctgtgggcggagagcaagaacatcggccacgg 56077 Query: 419 cttncgctgc 428 ||| |||||| Sbjct: 56076 cttccgctgc 56067 Score = 44.1 bits (22), Expect = 0.38 Identities = 43/50 (86%) Strand = Plus / Minus Query: 279 ttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcgg 328 |||||||| || |||||||||||| ||| ||| ||||||||||| |||| Sbjct: 56444 ttcgcgctggtgaacaaggccaccagccaagccatcaagcactccctcgg 56395
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.095 Identities = 58/70 (82%) Strand = Plus / Minus Query: 359 caacccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggcaaggg 418 |||||||| ||| |||| | ||||||||||||| ||||||||||| || | ||| | || Sbjct: 4394528 caacccggagtaacaggatgagtcggtgctgtgggcggagagcaagaacatcggccacgg 4394469 Query: 419 cttncgctgc 428 ||| |||||| Sbjct: 4394468 cttccgctgc 4394459 Score = 44.1 bits (22), Expect = 0.38 Identities = 43/50 (86%) Strand = Plus / Minus Query: 279 ttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcgg 328 |||||||| || |||||||||||| ||| ||| ||||||||||| |||| Sbjct: 4394836 ttcgcgctggtgaacaaggccaccagccaagccatcaagcactccctcgg 4394787
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.095 Identities = 58/70 (82%) Strand = Plus / Minus Query: 359 caacccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggcaaggg 418 |||||||| ||| |||| | ||||||||||||| ||||||||||| || | ||| | || Sbjct: 4395349 caacccggagtaacaggatgagtcggtgctgtgggcggagagcaagaacatcggccacgg 4395290 Query: 419 cttncgctgc 428 ||| |||||| Sbjct: 4395289 cttccgctgc 4395280 Score = 44.1 bits (22), Expect = 0.38 Identities = 43/50 (86%) Strand = Plus / Minus Query: 279 ttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcgg 328 |||||||| || |||||||||||| ||| ||| ||||||||||| |||| Sbjct: 4395657 ttcgcgctggtgaacaaggccaccagccaagccatcaagcactccctcgg 4395608
>gb|AY291460.1| Shuttle vector pNG168, complete sequence Length = 8960 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 163 ccgtccgcgacggcgaggtcgt 184 |||||||||||||||||||||| Sbjct: 8868 ccgtccgcgacggcgaggtcgt 8889
>gb|L26978.1|HLFINSVECB Shuttle vector pMLH3, complete sequence Length = 11291 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 163 ccgtccgcgacggcgaggtcgt 184 |||||||||||||||||||||| Sbjct: 8675 ccgtccgcgacggcgaggtcgt 8696
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 cgacggcgaggtcgtgctcgcc 191 |||||||||||||||||||||| Sbjct: 2232615 cgacggcgaggtcgtgctcgcc 2232636
>gb|M83531.1|HLFHMGA H.volcanii 3-hydroxy-3-methylglutaryl coenzyme A reductase (hmg) gene, complete cds Length = 1890 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 163 ccgtccgcgacggcgaggtcgt 184 |||||||||||||||||||||| Sbjct: 310 ccgtccgcgacggcgaggtcgt 289
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 gcctcgccgtccgcgacggcgaggt 181 ||||||||||||||| ||||||||| Sbjct: 164567 gcctcgccgtccgcgtcggcgaggt 164543
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 167 ccgcgacggcgaggtcgtgctcgcc 191 |||||||||||| |||||||||||| Sbjct: 5220909 ccgcgacggcgacgtcgtgctcgcc 5220933
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 gacatgcgcttcagcaccaccgtca 255 ||||| ||||||||||||||||||| Sbjct: 825719 gacatccgcttcagcaccaccgtca 825695 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 tcaacaaggccaccggcctc 308 |||||||||||||||||||| Sbjct: 504472 tcaacaaggccaccggcctc 504453
>gb|AY724720.1| Mycobacterium mucogenicum strain ATCC 49650 preprotein translocase SecA1 (secA1) gene, partial cds Length = 700 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cgtccgcgacggcgaggtcgt 184 ||||||||||||||||||||| Sbjct: 484 cgtccgcgacggcgaggtcgt 504
>gb|AY664416.1| Zea mays cultivar Mo17 locus bz, complete sequence Length = 203581 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 281 cgcgctcgtcaacaaggccaccggcctcg 309 |||||||| ||||||||||||| |||||| Sbjct: 171495 cgcgctcgccaacaaggccacctgcctcg 171523
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 cgcgacggcgaggtcgtgct 187 |||||||||||||||||||| Sbjct: 58762 cgcgacggcgaggtcgtgct 58743
>ref|XM_463443.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1725 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ggcgccggcggcgtccggcc 111 |||||||||||||||||||| Sbjct: 454 ggcgccggcggcgtccggcc 473
>gb|BC035897.1| Homo sapiens jumonji domain containing 3, mRNA (cDNA clone IMAGE:5240292), with apparent retained intron Length = 1864 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 cacaaggaccaggcgccggcggcg 104 |||||||||||||| ||||||||| Sbjct: 842 cacaaggaccaggctccggcggcg 865
>emb|AL596125.27| Mouse DNA sequence from clone RP23-5O23 on chromosome 11 Contains the Chd3 gene for chromodomain helicase DNA binding protein 3, five novel genes, the 3' end of the gene for a novel protein similar to dynein and four CpG islands, complete sequence Length = 165212 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 cacaaggaccaggcgccggcggcg 104 |||||||||||||| ||||||||| Sbjct: 56882 cacaaggaccaggctccggcggcg 56859
>emb|CR381576.10| Zebrafish DNA sequence from clone DKEY-245F17 in linkage group 17, complete sequence Length = 185749 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cagctccaaccagtctagcc 31 |||||||||||||||||||| Sbjct: 88254 cagctccaaccagtctagcc 88273
>gb|AC104581.22| Homo sapiens chromosome 17, clone RP11-1099M24, complete sequence Length = 187718 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 cacaaggaccaggcgccggcggcg 104 |||||||||||||| ||||||||| Sbjct: 17042 cacaaggaccaggctccggcggcg 17065
>gb|AF459424.1| Rhodococcus sp. NCIMB 9784 flavin-type hydroxylase and cytochrome P450 RhF (P450RhF) genes, complete cds Length = 4411 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 tcgccgtccgcgacggcgaggtcg 183 ||||||||| |||||||||||||| Sbjct: 3948 tcgccgtcctcgacggcgaggtcg 3971
>ref|XM_945439.1| PREDICTED: Homo sapiens jumonji domain containing 3, transcript variant 4 (JMJD3), mRNA Length = 4757 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 cacaaggaccaggcgccggcggcg 104 |||||||||||||| ||||||||| Sbjct: 3765 cacaaggaccaggctccggcggcg 3788
>ref|XM_941783.1| PREDICTED: Homo sapiens jumonji domain containing 3, transcript variant 3 (JMJD3), mRNA Length = 6701 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 cacaaggaccaggcgccggcggcg 104 |||||||||||||| ||||||||| Sbjct: 5709 cacaaggaccaggctccggcggcg 5732
>ref|XM_933967.1| PREDICTED: Homo sapiens jumonji domain containing 3, transcript variant 2 (JMJD3), mRNA Length = 4756 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 cacaaggaccaggcgccggcggcg 104 |||||||||||||| ||||||||| Sbjct: 3765 cacaaggaccaggctccggcggcg 3788
>ref|XM_043272.10| PREDICTED: Homo sapiens jumonji domain containing 3, transcript variant 1 (JMJD3), mRNA Length = 6694 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 cacaaggaccaggcgccggcggcg 104 |||||||||||||| ||||||||| Sbjct: 5703 cacaaggaccaggctccggcggcg 5726
>ref|NM_001017426.1| Mus musculus jumonji domain containing 3 (Jmjd3), mRNA Length = 6654 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 cacaaggaccaggcgccggcggcg 104 |||||||||||||| ||||||||| Sbjct: 5619 cacaaggaccaggctccggcggcg 5642
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 282 gcgctcgtcaacaaggccaccggcctcg 309 ||||||| ||||||||||||| |||||| Sbjct: 4711906 gcgctcgccaacaaggccacctgcctcg 4711933
>dbj|AB103463.1| Streptomyces sp. AM-7161 medermycin biosynthetic gene cluster (med-ORF1 - 30) and ORF P - Z , partial and complete cds Length = 36202 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ggcgccggcggcgtccggcc 111 |||||||||||||||||||| Sbjct: 10201 ggcgccggcggcgtccggcc 10220
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ggcgccggcggcgtccggcc 111 |||||||||||||||||||| Sbjct: 69270 ggcgccggcggcgtccggcc 69251
>gb|AE004481.1| Pseudomonas aeruginosa PAO1, section 42 of 529 of the complete genome Length = 11276 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 caaggccaccggcctcgccgtcaa 316 ||||||||||||||||| |||||| Sbjct: 2879 caaggccaccggcctcgacgtcaa 2856
>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0035J18, from chromsome 3, complete sequence Length = 162711 Score = 40.1 bits (20), Expect = 5.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 279 ttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactc 322 ||||||||||| || |||||||||||| ||| |||||||||| Sbjct: 58075 ttcgcgctcgtgaataaggccaccggcgaagccatcaagcactc 58032
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 aaggccaccggcctcgccgt 313 |||||||||||||||||||| Sbjct: 4674194 aaggccaccggcctcgccgt 4674213 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cgacggcgaggtcgtgctcg 189 |||||||||||||||||||| Sbjct: 740437 cgacggcgaggtcgtgctcg 740456
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 282 gcgctcgtcaacaaggccaccggcctcg 309 ||||||| ||||||||||||| |||||| Sbjct: 74505 gcgctcgccaacaaggccacctgcctcg 74532
>dbj|AK109619.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-A03, full insert sequence Length = 2768 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ggcgccggcggcgtccggcc 111 |||||||||||||||||||| Sbjct: 1957 ggcgccggcggcgtccggcc 1938
>dbj|AK105550.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-A10, full insert sequence Length = 1834 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ggcgccggcggcgtccggcc 111 |||||||||||||||||||| Sbjct: 462 ggcgccggcggcgtccggcc 481
>emb|AL928980.7| Zebrafish DNA sequence from clone DKEY-77M16 in linkage group 11, complete sequence Length = 167387 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 agctccaaccagtctagccg 32 |||||||||||||||||||| Sbjct: 57110 agctccaaccagtctagccg 57129
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ggacgaagagggcatgccgg 276 |||||||||||||||||||| Sbjct: 1060107 ggacgaagagggcatgccgg 1060126
>dbj|AB070949.1| Streptomyces avermitilis polyene macrolide biosynthetic gene cluster Length = 78210 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 tcaacaaggccaccggcctc 308 |||||||||||||||||||| Sbjct: 60386 tcaacaaggccaccggcctc 60405
>dbj|AB002344.2| Human mRNA for KIAA0346 gene, partial cds Length = 6698 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 cacaaggaccaggcgccggcggcg 104 |||||||||||||| ||||||||| Sbjct: 5714 cacaaggaccaggctccggcggcg 5737
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ggcgccggcggcgtccggcc 111 |||||||||||||||||||| Sbjct: 124183 ggcgccggcggcgtccggcc 124164 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,753,772 Number of Sequences: 3902068 Number of extensions: 2753772 Number of successful extensions: 51310 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 50316 Number of HSP's gapped (non-prelim): 966 length of query: 436 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 414 effective length of database: 17,147,199,772 effective search space: 7098940705608 effective search space used: 7098940705608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
