ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast58h09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MA2B1_HUMAN (O00754) Lysosomal alpha-mannosidase precursor (EC 3... 28 6.6
2MA2B1_MACFA (Q60HE9) Lysosomal alpha-mannosidase precursor (EC 3... 28 6.6

>MA2B1_HUMAN (O00754) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)|
           (Mannosidase, alpha B) (Lysosomal acid
           alpha-mannosidase) (Laman) (Mannosidase alpha class 2B
           member 1) [Contains: Lysosomal alpha-mannosidase A
           peptide; Lysosomal alpha-mannosidase
          Length = 1010

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +3

Query: 15  AASSQYHPPQLRYSVQLPPVG---WCAAVS*SWRP 110
           ++ SQ HPP+L +S  LP +G   +  A    W+P
Sbjct: 553 SSDSQAHPPELLFSASLPALGFSTYSVAQVPRWKP 587



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>MA2B1_MACFA (Q60HE9) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)|
           (Mannosidase, alpha B) (Lysosomal acid
           alpha-mannosidase) (Laman) (Mannosidase alpha class 2B
           member 1)
          Length = 1012

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +3

Query: 15  AASSQYHPPQLRYSVQLPPVG---WCAAVS*SWRP 110
           ++ SQ HPP+L +S  LP +G   +  A    W+P
Sbjct: 555 SSDSQAHPPELLFSASLPALGFSTYSVAQVPRWKP 589


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,964,198
Number of Sequences: 219361
Number of extensions: 253591
Number of successful extensions: 527
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 80,573,946
effective HSP length: 42
effective length of database: 71,360,784
effective search space used: 1712658816
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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