ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast58h03 |
|---|---|
| Clone Library Name | barley_pub |
>UCHL5_MOUSE (Q9WUP7) Ubiquitin carboxyl-terminal hydrolase isozyme L5 (EC| 3.4.19.12) (UCH-L5) (Ubiquitin thioesterase L5) (Ubiquitin C-terminal hydrolase UCH37) Length = 329 Score = 82.4 bits (202), Expect = 4e-16 Identities = 37/64 (57%), Positives = 47/64 (73%) Frame = +2 Query: 242 WCTIESDPGVFTELIQEMQVKGVQVEELYSLDVDSLSQLQPVYGLIFLFKWMPGGNDEQP 421 WC +ESDPGVFTELI+ +G QVEE++SL+ +S +L+PV+GLIFLFKW PG Sbjct: 8 WCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPESFEKLKPVHGLIFLFKWQPGEEPAGS 67 Query: 422 VVSD 433 VV D Sbjct: 68 VVQD 71
>UBLH2_SCHPO (Q9UUB6) Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15)| Length = 300 Score = 81.3 bits (199), Expect = 1e-15 Identities = 37/53 (69%), Positives = 44/53 (83%) Frame = +2 Query: 236 MSWCTIESDPGVFTELIQEMQVKGVQVEELYSLDVDSLSQLQPVYGLIFLFKW 394 MSW TIESD GVFT+LI+ + VK V+V+ELYSLDVDSL Q +YG+IFLFKW Sbjct: 1 MSWTTIESDAGVFTDLIENLGVKDVEVDELYSLDVDSLRQFPDIYGIIFLFKW 53
>UCHL5_HUMAN (Q9Y5K5) Ubiquitin carboxyl-terminal hydrolase isozyme L5 (EC| 3.4.19.12) (UCH-L5) (Ubiquitin thioesterase L5) (Ubiquitin C-terminal hydrolase UCH37) Length = 329 Score = 81.3 bits (199), Expect = 1e-15 Identities = 36/64 (56%), Positives = 47/64 (73%) Frame = +2 Query: 242 WCTIESDPGVFTELIQEMQVKGVQVEELYSLDVDSLSQLQPVYGLIFLFKWMPGGNDEQP 421 WC +ESDPGVFTELI+ +G QVEE++SL+ ++ +L+PV+GLIFLFKW PG Sbjct: 8 WCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGS 67 Query: 422 VVSD 433 VV D Sbjct: 68 VVQD 71
>UCHL5_BOVIN (Q9XSJ0) Ubiquitin carboxyl-terminal hydrolase isozyme L5 (EC| 3.4.19.12) (UCH-L5) (Ubiquitin thioesterase L5) (Ubiquitin C-terminal hydrolase UCH37) Length = 328 Score = 81.3 bits (199), Expect = 1e-15 Identities = 36/64 (56%), Positives = 47/64 (73%) Frame = +2 Query: 242 WCTIESDPGVFTELIQEMQVKGVQVEELYSLDVDSLSQLQPVYGLIFLFKWMPGGNDEQP 421 WC +ESDPGVFTELI+ +G QVEE++SL+ ++ +L+PV+GLIFLFKW PG Sbjct: 8 WCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGS 67 Query: 422 VVSD 433 VV D Sbjct: 68 VVQD 71
>UBH4_CAEEL (Q09444) Probable ubiquitin carboxyl-terminal hydrolase ubh-4 (EC| 3.4.19.12) (Ubiquitin C-terminal hydrolase family 1 member 4) (Ubiquitin thioesterase 4) Length = 321 Score = 76.6 bits (187), Expect = 2e-14 Identities = 36/55 (65%), Positives = 42/55 (76%) Frame = +2 Query: 239 SWCTIESDPGVFTELIQEMQVKGVQVEELYSLDVDSLSQLQPVYGLIFLFKWMPG 403 SWC IESDPGVFTE+++ V G+QVEELYSLD D + +P YGLIFLFKW G Sbjct: 6 SWCLIESDPGVFTEMLRGFGVDGLQVEELYSLD-DDKAMTRPTYGLIFLFKWRQG 59
>BAP1_MOUSE (Q99PU7) Ubiquitin carboxyl-terminal hydrolase BAP1 (EC 3.4.19.12)| (BRCA1-associated protein 1) (Ubiquitin C-terminal hydrolase X4) (UCH-X4) Length = 728 Score = 62.8 bits (151), Expect = 4e-10 Identities = 31/52 (59%), Positives = 39/52 (75%) Frame = +2 Query: 242 WCTIESDPGVFTELIQEMQVKGVQVEELYSLDVDSLSQLQPVYGLIFLFKWM 397 W +ESDPG+FT L+++ VKGVQVEE+Y D+ S Q PVYG IFLFKW+ Sbjct: 5 WLELESDPGLFTLLVEDFGVKGVQVEEIY--DLQSKCQ-GPVYGFIFLFKWI 53
>BAP1_HUMAN (Q92560) Ubiquitin carboxyl-terminal hydrolase BAP1 (EC 3.4.19.12)| (BRCA1-associated protein 1) (Cerebral protein 6) Length = 729 Score = 62.8 bits (151), Expect = 4e-10 Identities = 31/52 (59%), Positives = 39/52 (75%) Frame = +2 Query: 242 WCTIESDPGVFTELIQEMQVKGVQVEELYSLDVDSLSQLQPVYGLIFLFKWM 397 W +ESDPG+FT L+++ VKGVQVEE+Y D+ S Q PVYG IFLFKW+ Sbjct: 5 WLELESDPGLFTLLVEDFGVKGVQVEEIY--DLQSKCQ-GPVYGFIFLFKWI 53
>AMPA_PHOLL (Q7MZ27) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 506 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%) Frame = +1 Query: 271 FHRVDSGDASKRCTGG---GALLSRCGLS*STTASVWVNFSLQVDAWR 405 F ++DS A TGG GA+ + C LS T W + + AWR Sbjct: 427 FEQIDSNFADLANTGGSGGGAITAACFLSRFATKYHWAHLDIAGTAWR 474
>UCHL_DROME (P35122) Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)| (Ubiquitin thioesterase) Length = 227 Score = 29.3 bits (64), Expect = 4.3 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Frame = +2 Query: 236 MSWCTIESDPGVFTELIQEMQVKGV-QVEELYSLDVDSLSQL-QPVYGLIFLF 388 ++W +ES+P V T+ I ++ V V ++ L+ D+L + +PV I LF Sbjct: 2 LTWTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLF 54
>SEC2_YEAST (P17065) Rab guanine nucleotide exchange factor SEC2 (GDP-GTP| exchange factor SEC2) Length = 759 Score = 28.5 bits (62), Expect = 7.4 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Frame = +1 Query: 181 SPRFASLARCCAVGGSSEDVVVHDRVR-PRCFHRVDSGDASKRCTGGGALLSRCGLS*ST 357 SP A A C G S +D++ H R+ + H+ D D ++ T L C L Sbjct: 325 SPPVAVHAACSFCGESRDDIIEHARMYILKTLHKTD--DGKEQVTNTYPLCHWCLLKLRQ 382 Query: 358 TASVWVNF-SLQVDAW 402 T ++ SL+V AW Sbjct: 383 TCEIFAFLRSLKVGAW 398
>YF1M_CAEEL (Q21874) Hypothetical protein R09E10.5 precursor| Length = 1459 Score = 28.1 bits (61), Expect = 9.7 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = +2 Query: 281 LIQEMQVKGVQVEELYSLDVDSLSQLQPVYGLI 379 +++E Q+ GV+V E Y+LD+D L Q G++ Sbjct: 1007 VLEEAQI-GVKVTESYALDIDRLPNYQESMGML 1038 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,265,956 Number of Sequences: 219361 Number of extensions: 604570 Number of successful extensions: 1435 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1401 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1432 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
