ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast58h02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KAP2_BOVIN (P00515) cAMP-dependent protein kinase type II-alpha ... 28 4.7
2ACTB_DICDI (P24005) Calcium-regulated actin bundling protein (34... 28 6.2

>KAP2_BOVIN (P00515) cAMP-dependent protein kinase type II-alpha regulatory|
           subunit
          Length = 400

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 170 SSIAPAAKPTGGADRDPGAG 111
           +S  PAA P+G  D DPGAG
Sbjct: 46  ASTPPAAPPSGSQDFDPGAG 65



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>ACTB_DICDI (P24005) Calcium-regulated actin bundling protein (34 kDa|
           actin-binding protein)
          Length = 295

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -1

Query: 179 SRPSSIAPAAKPTGGADRDPGAGRE*VGRELGDFWW 72
           S  +++  A+K  GGA    GAG    G   G  WW
Sbjct: 243 SAEAAVRTASKKYGGAAYSGGAGDAGAGSSAGAIWW 278


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.128    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,884,254
Number of Sequences: 219361
Number of extensions: 211940
Number of successful extensions: 797
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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