ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast58g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 ... 81 1e-15
2E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 ... 79 4e-15
3E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (... 77 1e-14
4E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 ... 76 3e-14
5E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 ... 49 7e-06
6EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 ... 48 1e-05
7E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 ... 45 1e-04
8EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudo... 38 0.013
9GAS1_YEAST (P22146) Glycolipid-anchored surface protein 1 precur... 37 0.022
10PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regula... 36 0.049
11YLM2_SCHPO (Q9P378) Hypothetical protein C19B12.02c precursor 33 0.41
12PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regula... 32 0.54
13KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-as... 31 1.2
14FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor 31 1.6
15EPD2_CANMA (O74137) Protein EPD2 precursor (Essential for pseudo... 30 2.7
16NPC1_HUMAN (O15118) Niemann-Pick C1 protein precursor 30 3.5
17RSMB_VIBCH (Q9KVU5) Ribosomal RNA small subunit methyltransferas... 29 4.5
18ATM_GIBZE (Q4IB89) Serine/threonine-protein kinase TEL1 (EC 2.7.... 29 4.5
19DLDH_TRYBB (Q04933) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (Di... 29 4.5
20HXD1_HUMAN (Q9GZZ0) Homeobox protein Hox-D1 29 5.9
21PTFC_BACAM (P41029) Fructose permease IIC component (PTS system ... 29 5.9
22RTCA_PYRKO (Q5JIQ0) Probable RNA 3'-terminal phosphate cyclase (... 28 7.7

>E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 501

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = +1

Query: 199 YCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYAWHSYYQKNAG 375
           +C+ K   +   +Q A+D+ACG G  DC+ +     C++P  VVAH +YA+++YYQK   
Sbjct: 360 FCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGK 419

Query: 376 MGATCDFMGVATLTGADPSAGS 441
              +CDF GVAT+T  DPS G+
Sbjct: 420 ASGSCDFKGVATVTTTDPSRGT 441



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>E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 402

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = +1

Query: 199 YCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYAWHSYYQKNAG 375
           YC+     +   +Q A+D+ACG G ++C++I     C+QP +V  H S+A++SYYQK   
Sbjct: 272 YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGR 331

Query: 376 MGATCDFMGVATLTGADPSAGS 441
              +CDF GVA +T  DPS GS
Sbjct: 332 ASGSCDFKGVAMITTTDPSHGS 353



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>E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)|
           ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
          Length = 461

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 37/80 (46%), Positives = 45/80 (56%)
 Frame = +1

Query: 199 YCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYAWHSYYQKNAGM 378
           +CV K  AN   +Q  I+YACG   DC  I S G CF P S+ AH SY  ++YYQ N   
Sbjct: 377 WCVAKDGANGTDLQNNINYACGF-VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHT 435

Query: 379 GATCDFMGVATLTGADPSAG 438
              CDF G   +T +DPS G
Sbjct: 436 DLACDFKGTGIVTSSDPSYG 455



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>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 505

 Score = 76.3 bits (186), Expect = 3e-14
 Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
 Frame = +1

Query: 193 AMYCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYAWHSYYQKN 369
           +M+CV K+DA+   +   +++ACG+G A+C  I    PC+ P  V +H S+A++ YYQK 
Sbjct: 360 SMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKM 419

Query: 370 AGMGATCDFMGVATLTGADPS 432
              G TCDF G A  T  DPS
Sbjct: 420 KSAGGTCDFDGTAITTTRDPS 440



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>E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 484

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
 Frame = +1

Query: 199 YCVCKSDANPVAMQ--KAIDYACGKGADCTQITSNGPCFQPISVVAHCSYAWHSYYQKNA 372
           +C+   +AN    Q   ++ YAC   ADCT +     C   +++  + SYA++SYYQ + 
Sbjct: 365 WCILAPNANLQDPQLGPSVSYACDH-ADCTSLGYGSSCGN-LNLAQNVSYAFNSYYQVSN 422

Query: 373 GMGATCDFMGVATLTGADPSAGS 441
            + + C F G++ ++  DPS GS
Sbjct: 423 QLDSACKFPGLSIVSTRDPSVGS 445



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>EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Anther-specific protein A6)
          Length = 478

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = +1

Query: 196 MYCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYAWHSYYQKNA 372
           ++CV    AN   +++ +  AC +    C  +     C++P+S+  H SYA +SY+ +  
Sbjct: 388 VWCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFR 447

Query: 373 GMGATCDFMGVATLTGADP 429
                C F G+A  T  +P
Sbjct: 448 NQSIQCFFNGLAHETTTNP 466



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>E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 477

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
 Frame = +1

Query: 199 YCVCKSDA--NPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYAWHSYYQKNA 372
           +CV K +   +   +  A+ YAC  G DCT +     C   +    + SYA++SYYQ   
Sbjct: 362 WCVMKPNVRLDDPQVAPAVSYACSLG-DCTSLGVGTSCAN-LDGKQNISYAFNSYYQIQD 419

Query: 373 GMGATCDFMGVATLTGADPSAGS 441
            +   C F  ++ +T  DPS G+
Sbjct: 420 QLDTACKFPNISEVTKTDPSTGT 442



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>EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudohyphal|
           development 1)
          Length = 549

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
 Frame = +1

Query: 187 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGP-----CFQPISVVAHCSYAWH 351
           S ++ CV   + +        DY C K  DC+ I +N        + P       S+  +
Sbjct: 373 SSSLKCVVADNVSTDDYSDLFDYVCAK-IDCSGINANATTGDYGAYSPCGAKDKLSFVLN 431

Query: 352 SYYQKNAGMGATCDFMGVATLTGADPSA 435
            YY++     + CDF G A+L  A  ++
Sbjct: 432 LYYEEQNESKSACDFSGSASLQSASTAS 459



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>GAS1_YEAST (P22146) Glycolipid-anchored surface protein 1 precursor|
           (Glycoprotein GP115)
          Length = 559

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
 Frame = +1

Query: 202 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPC-----FQPISVVAHCSYAWHSYYQK 366
           CV   D +    +   ++ C +  DC+ I++NG       +   +     S+  + YY+K
Sbjct: 379 CVVSDDVDSDDYETLFNWICNE-VDCSGISANGTAGKYGAYSFCTPKEQLSFVMNLYYEK 437

Query: 367 NAGMGATCDFMGVATLTGADPSA 435
           + G  + C F G ATL  A   A
Sbjct: 438 SGGSKSDCSFSGSATLQTATTQA 460



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>PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regulated protein 2)|
          Length = 546

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
 Frame = +1

Query: 187 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGP-----CFQPISVVAHCSYAWH 351
           S ++ CV     +         Y C K  DC  I +NG       + P       S+  +
Sbjct: 375 SASLKCVVDDKVDSDDYSDLFSYICAK-IDCDGINANGTTGEYGAYSPCHSKDKLSFVMN 433

Query: 352 SYYQKNAGMGATCDFMGVATLTGA 423
            YY++N    + CDF G A+L  A
Sbjct: 434 LYYEQNKESKSACDFGGSASLQSA 457



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>YLM2_SCHPO (Q9P378) Hypothetical protein C19B12.02c precursor|
          Length = 542

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 23/86 (26%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
 Frame = +1

Query: 202 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCS------YAWHSYYQ 363
           CV   D +         Y C +   C  IT+NG         ++C       Y   +YY 
Sbjct: 376 CVINDDVSSDDYSDLFSYVCNE-ISCDGITANGTYPGQYGSYSYCDAKQQLDYVLDAYYS 434

Query: 364 KNAGMGATCDFMGVATLTGADPSAGS 441
                   CDF G ATL  A  + G+
Sbjct: 435 AKGD----CDFSGSATLVSASSATGT 456



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>PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regulated protein 1)|
          Length = 548

 Score = 32.3 bits (72), Expect = 0.54
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
 Frame = +1

Query: 187 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCS------YAW 348
           S ++ CV   D +           CG   DC+ I+++G   +   V + CS      Y  
Sbjct: 385 SKSLECVVADDVDKEDYGDLFGQVCGY-IDCSAISADGSKGE-YGVASFCSDKDRLSYVL 442

Query: 349 HSYYQKNAGMGATCDFMGVATLTGADPSAGS 441
           + YY       + CDF G A++     ++GS
Sbjct: 443 NQYYLDQDKKSSACDFKGSASINSKASASGS 473



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>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated|
           protein 10.8) (High sulfur keratin-associated protein
           10.8) (Keratin-associated protein 18-8)
           (Keratin-associated protein 18.8)
          Length = 259

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = +1

Query: 205 VCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYAWHSYYQKNAGMGA 384
           +C   ++P   Q +   AC   + C Q      C +PI  V  CS A     QK++   A
Sbjct: 137 ICSGASSPCCQQSSCQSACCTFSPCQQACCVPICCKPICCVPVCSGASSLCCQKSSCQPA 196

Query: 385 TC 390
            C
Sbjct: 197 CC 198



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>FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor|
          Length = 4007

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
 Frame = +1

Query: 202 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQP-ISVVAHCSYAWHSYYQKNAGM 378
           C+C         Q  +   CGKG   ++   +G C +  +S    CSY     YQ     
Sbjct: 242 CICDRGEVRCHKQACLPLRCGKGQ--SRARRHGQCCEECVSPAGSCSYDGVVRYQDEMWK 299

Query: 379 GATCDF 396
           G+ C+F
Sbjct: 300 GSACEF 305



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>EPD2_CANMA (O74137) Protein EPD2 precursor (Essential for pseudohyphal|
           development 2)
          Length = 549

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 5/81 (6%)
 Frame = +1

Query: 187 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPC-----FQPISVVAHCSYAWH 351
           S +  CV   D +           CG   DC  I++NG       F   S     SY  +
Sbjct: 385 SQSFNCVVADDVDAEDYSTLFGEVCGY-IDCGDISANGNTGEYGGFSFCSDKDRLSYVLN 443

Query: 352 SYYQKNAGMGATCDFMGVATL 414
            YY         CDF G A++
Sbjct: 444 QYYHDQNERADACDFAGSASI 464



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>NPC1_HUMAN (O15118) Niemann-Pick C1 protein precursor|
          Length = 1278

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 187 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITS 294
           ++AMY  C+    P +  KA+   CGK AD    T+
Sbjct: 153 ANAMYNACRDVEAPSSNDKALGLLCGKDADACNATN 188



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>RSMB_VIBCH (Q9KVU5) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 434

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
 Frame = +3

Query: 3   LHTTTPLHSLPRHADXXXXXXXXXATSALTSAAREELELHPAACCNGGSSGPHALAR--- 173
           L T   +H LP  A+         A  ALT  A +  EL    C   G    H L R   
Sbjct: 216 LETPCDVHQLPGFAEGWVSVQDAAAQLALTYLAPQAGELILDCCAAPGGKTAHILERTPE 275

Query: 174 -HVRRLRCDVLRVQVGRE 224
             V  + CD  R++  RE
Sbjct: 276 SQVVAIDCDETRLKRVRE 293



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>ATM_GIBZE (Q4IB89) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
           (DNA-damage checkpoint kinase TEL1) (Telomere length
           regulation protein 1) (ATM homolog)
          Length = 2813

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = -2

Query: 227 GFASDLHTQYIASEPANMASKSMRTRGAAIAASSGVELELFSRRRGQSTSSWQAKR 60
           GF  D+  QY+  + A++++ S+     A+  SS      +SR  G+ST S Q++R
Sbjct: 169 GFFLDV-AQYLLPDEADISTLSLARASPALTRSSPAPGSGYSRSGGRSTPSTQSQR 223



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>DLDH_TRYBB (Q04933) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (Dihydrolipoamide|
           dehydrogenase)
          Length = 479

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 7/78 (8%)
 Frame = +3

Query: 15  TPLHSLPRHADXXXXXXXXXATSALTSAAREELELHPAACCNGGSSGPHALARHVRR--- 185
           T +   PR A             AL     +E+ +      NG ++G  AL   V +   
Sbjct: 210 TVVEFAPRCAPTLDSDVTDALVGALKRNGEDEVPMTGIEGVNGTNNGSIALTLEVEQAGG 269

Query: 186 ----LRCDVLRVQVGREP 227
               L CD L V VGR P
Sbjct: 270 QAETLHCDALLVSVGRRP 287



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>HXD1_HUMAN (Q9GZZ0) Homeobox protein Hox-D1|
          Length = 328

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +1

Query: 208 CKSDANPVAMQKAIDYACGKGA--DCTQITSNGPCFQPISVVAHCS 339
           C+SDA PVA+Q A     G GA   C  + +  P   P +  A  S
Sbjct: 28  CRSDARPVALQPAFPLGNGDGAFVSCLPLAAARPSPSPPAAPARPS 73



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>PTFC_BACAM (P41029) Fructose permease IIC component (PTS system|
           fructose-specific EIIC component) (Fragment)
          Length = 304

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 298 GPCFQPISVVAHCSYAWHSYYQKNAGMGATCDFMGVATLT-GADPSAGS 441
           G    P+ +    ++  H + +++   G TC FMG A +T GA P A +
Sbjct: 186 GGMVPPLGIALATTFFRHKFSKRDREAGITCYFMGAAFVTEGAIPFAAA 234



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>RTCA_PYRKO (Q5JIQ0) Probable RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)|
           (RNA-3'-phosphate cyclase) (RNA cyclase)
          Length = 343

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 10/50 (20%)
 Frame = -2

Query: 125 GVELELFSRRRGQ----------STSSWQAKRGRELVGVAWERVEWGGGV 6
           G+++EL  +RRG               W+ K+   L  + WER+EW  G+
Sbjct: 144 GIKVELEIKRRGHYPRGGGLVVGRIEPWEEKK--PLKALKWERIEWFAGI 191


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,536,339
Number of Sequences: 219361
Number of extensions: 930271
Number of successful extensions: 3799
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3791
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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