ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast58g01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479197.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1305 Score = 333 bits (168), Expect = 3e-88 Identities = 255/284 (89%) Strand = Plus / Plus Query: 147 ggaggaggagatggagaggccggcgccggtgaggaagtcccacaccaacacggccgatct 206 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 170 ggagggggagatggagaggccggcgccggtgaggaagtcccacacgtcgacggccgacct 229 Query: 207 gctggcgtggccggagggcgcgcagccggagctcgtcgacggggccacgccgccgcccaa 266 |||| ||||||||||||||||| | |||||||| || ||||||||||||||||||||| Sbjct: 230 gctgacgtggccggagggcgcggcccaggagctcgccgccggggccacgccgccgcccaa 289 Query: 267 ccgccgcccgcaccagccgtcggaggcgatccacaaggtggtgttcggcgggcaggtcac 326 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 290 ccgccggccgcaccagccgtcggaggcgatcagtaaggtggtgttcggcgggcaggtgac 349 Query: 327 ggaggaggaggccgagagcctcaacaagaggaaacaatgctccgctcccaagtggaagga 386 ||||||||| ||||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 350 cgaggaggagttcgagagcctcaacaagaggaaaccatgctcagctcccaaatggaagga 409 Query: 387 gatgacaggaagtggcatatttgcagctggaggtgaggctgagg 430 |||||||||||| |||||||||||||| | ||| |||| ||||| Sbjct: 410 gatgacaggaagcggcatatttgcagcggaaggcgaggttgagg 453 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 51 cctcgcctcgcctttttagagagagaaa 78 |||| ||||||||||||||||||||||| Sbjct: 24 cctcacctcgcctttttagagagagaaa 51
>dbj|AK063642.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-G12, full insert sequence Length = 1305 Score = 333 bits (168), Expect = 3e-88 Identities = 255/284 (89%) Strand = Plus / Plus Query: 147 ggaggaggagatggagaggccggcgccggtgaggaagtcccacaccaacacggccgatct 206 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 170 ggagggggagatggagaggccggcgccggtgaggaagtcccacacgtcgacggccgacct 229 Query: 207 gctggcgtggccggagggcgcgcagccggagctcgtcgacggggccacgccgccgcccaa 266 |||| ||||||||||||||||| | |||||||| || ||||||||||||||||||||| Sbjct: 230 gctgacgtggccggagggcgcggcccaggagctcgccgccggggccacgccgccgcccaa 289 Query: 267 ccgccgcccgcaccagccgtcggaggcgatccacaaggtggtgttcggcgggcaggtcac 326 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 290 ccgccggccgcaccagccgtcggaggcgatcagtaaggtggtgttcggcgggcaggtgac 349 Query: 327 ggaggaggaggccgagagcctcaacaagaggaaacaatgctccgctcccaagtggaagga 386 ||||||||| ||||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 350 cgaggaggagttcgagagcctcaacaagaggaaaccatgctcagctcccaaatggaagga 409 Query: 387 gatgacaggaagtggcatatttgcagctggaggtgaggctgagg 430 |||||||||||| |||||||||||||| | ||| |||| ||||| Sbjct: 410 gatgacaggaagcggcatatttgcagcggaaggcgaggttgagg 453 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 51 cctcgcctcgcctttttagagagagaaa 78 |||| ||||||||||||||||||||||| Sbjct: 24 cctcacctcgcctttttagagagagaaa 51
>gb|AY596560.1| Saccharum officinarum clone SCUTLR1037C12, complete sequence Length = 1314 Score = 295 bits (149), Expect = 6e-77 Identities = 244/273 (89%), Gaps = 2/273 (0%) Strand = Plus / Plus Query: 157 atggagaggccggcgccggtgaggaagtcccacaccaacacggccgatctgctggcgtgg 216 ||||||||||||||||||||||||||||||||||| ||||| || |||||| ||| Sbjct: 205 atggagaggccggcgccggtgaggaagtcccacacgtcgacggcggacctgctgatctgg 264 Query: 217 ccggagggcgcgcagccggagctcgtc-gacggggccacgccgccgcccaaccgccgccc 275 |||||||| |||| || |||| ||||| | ||||||||||||||| |||||||||| | Sbjct: 265 ccggagggggcgccgcaggag-tcgtccgccggggccacgccgccatccaaccgccggtc 323 Query: 276 gcaccagccgtcggaggcgatccacaaggtggtgttcggcgggcaggtcacggaggagga 335 ||||||||| ||||||||| || | ||||||||||||||||||||||| ||||||||||| Sbjct: 324 gcaccagccatcggaggcgctcaagaaggtggtgttcggcgggcaggtgacggaggagga 383 Query: 336 ggccgagagcctcaacaagaggaaacaatgctccgctcccaagtggaaggagatgacagg 395 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 384 ggccgagagcctcaacaagaggaaaccatgctctgctcccaagtggaaggagatgacagg 443 Query: 396 aagtggcatatttgcagctggaggtgaggctga 428 ||| ||||||||||||||||| || |||||||| Sbjct: 444 aagcggcatatttgcagctgggggcgaggctga 476 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 56 cctcgcctttttagagagagaaac 79 |||||||||||||||||||||||| Sbjct: 38 cctcgcctttttagagagagaaac 61 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 3 caccttccttccattcgactccac 26 |||||||||||||||||||||||| Sbjct: 1 caccttccttccattcgactccac 24
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 159 bits (80), Expect = 9e-36 Identities = 122/136 (89%) Strand = Plus / Minus Query: 147 ggaggaggagatggagaggccggcgccggtgaggaagtcccacaccaacacggccgatct 206 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 25754004 ggagggggagatggagaggccggcgccggtgaggaagtcccacacgtcgacggccgacct 25753945 Query: 207 gctggcgtggccggagggcgcgcagccggagctcgtcgacggggccacgccgccgcccaa 266 |||| ||||||||||||||||| | |||||||| || ||||||||||||||||||||| Sbjct: 25753944 gctgacgtggccggagggcgcggcccaggagctcgccgccggggccacgccgccgcccaa 25753885 Query: 267 ccgccgcccgcaccag 282 |||||| ||||||||| Sbjct: 25753884 ccgccggccgcaccag 25753869 Score = 99.6 bits (50), Expect = 7e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 280 cagccgtcggaggcgatccacaaggtggtgttcggcgggcaggtcacggaggaggaggcc 339 |||||||||||||||||| ||||||||||||||||||||||| || ||||||||| | Sbjct: 25753774 cagccgtcggaggcgatcagtaaggtggtgttcggcgggcaggtgaccgaggaggagttc 25753715 Query: 340 gagagcctcaacaagagg 357 |||||||||||||||||| Sbjct: 25753714 gagagcctcaacaagagg 25753697 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 355 aggaaacaatgctccgctcccaagtggaaggagatgacaggaagtggcatatttgcagct 414 ||||||| |||||| |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 25753064 aggaaaccatgctcagctcccaaatggaaggagatgacaggaagcggcatatttgcagcg 25753005 Query: 415 ggaggtgaggctgagg 430 | ||| |||| ||||| Sbjct: 25753004 gaaggcgaggttgagg 25752989 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 1 ctcaccttccttccattcgactccactccactc 33 ||||||||||||||||||||||||||||||||| Sbjct: 25754187 ctcaccttccttccattcgactccactccactc 25754155 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 51 cctcgcctcgcctttttagagagagaaa 78 |||| ||||||||||||||||||||||| Sbjct: 25754150 cctcacctcgcctttttagagagagaaa 25754123
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524E08 Length = 154696 Score = 159 bits (80), Expect = 9e-36 Identities = 122/136 (89%) Strand = Plus / Minus Query: 147 ggaggaggagatggagaggccggcgccggtgaggaagtcccacaccaacacggccgatct 206 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 71166 ggagggggagatggagaggccggcgccggtgaggaagtcccacacgtcgacggccgacct 71107 Query: 207 gctggcgtggccggagggcgcgcagccggagctcgtcgacggggccacgccgccgcccaa 266 |||| ||||||||||||||||| | |||||||| || ||||||||||||||||||||| Sbjct: 71106 gctgacgtggccggagggcgcggcccaggagctcgccgccggggccacgccgccgcccaa 71047 Query: 267 ccgccgcccgcaccag 282 |||||| ||||||||| Sbjct: 71046 ccgccggccgcaccag 71031 Score = 99.6 bits (50), Expect = 7e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 280 cagccgtcggaggcgatccacaaggtggtgttcggcgggcaggtcacggaggaggaggcc 339 |||||||||||||||||| ||||||||||||||||||||||| || ||||||||| | Sbjct: 70936 cagccgtcggaggcgatcagtaaggtggtgttcggcgggcaggtgaccgaggaggagttc 70877 Query: 340 gagagcctcaacaagagg 357 |||||||||||||||||| Sbjct: 70876 gagagcctcaacaagagg 70859 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 355 aggaaacaatgctccgctcccaagtggaaggagatgacaggaagtggcatatttgcagct 414 ||||||| |||||| |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 70226 aggaaaccatgctcagctcccaaatggaaggagatgacaggaagcggcatatttgcagcg 70167 Query: 415 ggaggtgaggctgagg 430 | ||| |||| ||||| Sbjct: 70166 gaaggcgaggttgagg 70151 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 1 ctcaccttccttccattcgactccactccactc 33 ||||||||||||||||||||||||||||||||| Sbjct: 71349 ctcaccttccttccattcgactccactccactc 71317 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 51 cctcgcctcgcctttttagagagagaaa 78 |||| ||||||||||||||||||||||| Sbjct: 71312 cctcacctcgcctttttagagagagaaa 71285
>dbj|AK101680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058I20, full insert sequence Length = 1135 Score = 153 bits (77), Expect = 6e-34 Identities = 113/125 (90%) Strand = Plus / Plus Query: 268 cgccgcccgcaccagccgtcggaggcgatccacaaggtggtgttcggcgggcaggtcacg 327 |||||||| |||||||| ||||||||| | |||||||||||||| || ||||||||| Sbjct: 154 cgccgcccccaccagccatcggaggcgctgaggaaggtggtgttcggtggccaggtcacg 213 Query: 328 gaggaggaggccgagagcctcaacaagaggaaacaatgctccgctcccaagtggaaggag 387 |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||| Sbjct: 214 gaggaggaggccgagagcctcaacaagaggaagccatgctccgcgcccaagtggaaggag 273 Query: 388 atgac 392 ||||| Sbjct: 274 atgac 278 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 151 gaggagatggagaggccggcgccggtgaggaagtcccacacc 192 |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 34 gaggagatggagcggccggcgccggtgaggaagtcccacacc 75
>dbj|AK068724.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161E13, full insert sequence Length = 1181 Score = 153 bits (77), Expect = 6e-34 Identities = 113/125 (90%) Strand = Plus / Plus Query: 268 cgccgcccgcaccagccgtcggaggcgatccacaaggtggtgttcggcgggcaggtcacg 327 |||||||| |||||||| ||||||||| | |||||||||||||| || ||||||||| Sbjct: 157 cgccgcccccaccagccatcggaggcgctgaggaaggtggtgttcggtggccaggtcacg 216 Query: 328 gaggaggaggccgagagcctcaacaagaggaaacaatgctccgctcccaagtggaaggag 387 |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||| Sbjct: 217 gaggaggaggccgagagcctcaacaagaggaagccatgctccgcgcccaagtggaaggag 276 Query: 388 atgac 392 ||||| Sbjct: 277 atgac 281 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 151 gaggagatggagaggccggcgccggtgaggaagtcccacacc 192 |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 37 gaggagatggagcggccggcgccggtgaggaagtcccacacc 78
>dbj|AK060532.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A03, full insert sequence Length = 1307 Score = 153 bits (77), Expect = 6e-34 Identities = 113/125 (90%) Strand = Plus / Plus Query: 268 cgccgcccgcaccagccgtcggaggcgatccacaaggtggtgttcggcgggcaggtcacg 327 |||||||| |||||||| ||||||||| | |||||||||||||| || ||||||||| Sbjct: 175 cgccgcccccaccagccatcggaggcgctgaggaaggtggtgttcggtggccaggtcacg 234 Query: 328 gaggaggaggccgagagcctcaacaagaggaaacaatgctccgctcccaagtggaaggag 387 |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||| Sbjct: 235 gaggaggaggccgagagcctcaacaagaggaagccatgctccgcgcccaagtggaaggag 294 Query: 388 atgac 392 ||||| Sbjct: 295 atgac 299 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 151 gaggagatggagaggccggcgccggtgaggaagtcccacacc 192 |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 55 gaggagatggagcggccggcgccggtgaggaagtcccacacc 96
>gb|AY596580.1| Saccharum officinarum clone SCCCCL3120B06, complete sequence Length = 1308 Score = 129 bits (65), Expect = 8e-27 Identities = 113/129 (87%) Strand = Plus / Minus Query: 279 ccagccgtcggaggcgatccacaaggtggtgttcggcgggcaggtcacggaggaggaggc 338 ||||||||||||||| ||| |||||||||||||| || |||||||| ||||||||||| Sbjct: 1102 ccagccgtcggaggctatcaggaaggtggtgttcgggggccaggtcaccgaggaggaggc 1043 Query: 339 cgagagcctcaacaagaggaaacaatgctccgctcccaagtggaaggagatgacaggaag 398 ||| ||||||| ||||||||| | |||||||| |||||||||||||||||||| || || Sbjct: 1042 cgacagcctcaccaagaggaagccgtgctccgcgcccaagtggaaggagatgacggggag 983 Query: 399 tggcatatt 407 |||||||| Sbjct: 982 cggcatatt 974 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 147 ggaggaggagatggagaggccggcgccggtgaggaagtcccacaccaacacggccgatct 206 |||||| ||||||||| || ||||||||||||||| ||||||||| ||||||||| || Sbjct: 1228 ggaggaagagatggagcgggcggcgccggtgaggagctcccacacctccacggccgacct 1169 Query: 207 gctggcgtggccg 219 || ||||||||| Sbjct: 1168 actcgcgtggccg 1156
>gb|AY105912.1| Zea mays PCO095569 mRNA sequence Length = 1283 Score = 121 bits (61), Expect = 2e-24 Identities = 100/113 (88%) Strand = Plus / Plus Query: 280 cagccgtcggaggcgatccacaaggtggtgttcggcgggcaggtcacggaggaggaggcc 339 |||||||||||||| ||| |||||||||||||| || |||||||| |||||||||||| Sbjct: 246 cagccgtcggaggctatcaggaaggtggtgttcgggggtcaggtcaccgaggaggaggcc 305 Query: 340 gagagcctcaacaagaggaaacaatgctccgctcccaagtggaaggagatgac 392 || ||||||| ||||||||| | |||||||| |||||||||||||||||||| Sbjct: 306 gacagcctcaccaagaggaagccgtgctccgcgcccaagtggaaggagatgac 358 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 152 aggagatggagaggccggcgccggtgaggaagtcccacaccaacacggccgatctgctgg 211 ||||||||||| || ||||||||||||||| ||||||||| ||||||||| || || | Sbjct: 127 aggagatggagcgggcggcgccggtgaggagctcccacacctccacggccgacctactcg 186 Query: 212 cgtggccg 219 |||||||| Sbjct: 187 cgtggccg 194
>gb|AY111811.1| Zea mays CL5517_1 mRNA sequence Length = 1222 Score = 103 bits (52), Expect = 5e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 347 tcaacaagaggaaacaatgctccgctcccaagtggaaggagatgacaggaagtggcatat 406 ||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 230 tcaacaagaggaaaccatgctctgctcccaagtggaaggagatgacaggaagcggcatat 289 Query: 407 ttgc 410 |||| Sbjct: 290 ttgc 293 Score = 73.8 bits (37), Expect = 4e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 263 ccaaccgccgcccgcaccagccgtcggaggcgatccacaaggtggtgttcggcgggcagg 322 |||||||||| ||||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 146 ccaaccgccggccgcatcagccgtcggaggcgctcaggaaggtggtgttcggcgggcagg 205 Query: 323 t 323 | Sbjct: 206 t 206 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 157 atggagaggccggcgccggtgaggaagtcccacac 191 |||||||||||||| |||||||||||||| ||||| Sbjct: 40 atggagaggccggcaccggtgaggaagtctcacac 74
>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete sequence Length = 137709 Score = 97.6 bits (49), Expect = 3e-17 Identities = 55/57 (96%) Strand = Plus / Minus Query: 301 aaggtggtgttcggcgggcaggtcacggaggaggaggccgagagcctcaacaagagg 357 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 38074 aaggtggtgttcggtggccaggtcacggaggaggaggccgagagcctcaacaagagg 38018 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 151 gaggagatggagaggccggcgccggtgaggaagtcccacacc 192 |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 38299 gaggagatggagcggccggcgccggtgaggaagtcccacacc 38258 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 363 atgctccgctcccaagtggaaggagatgac 392 ||||||||| |||||||||||||||||||| Sbjct: 37867 atgctccgcgcccaagtggaaggagatgac 37838
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 97.6 bits (49), Expect = 3e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 301 aaggtggtgttcggcgggcaggtcacggaggaggaggccgagagcctcaacaagagg 357 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 15299274 aaggtggtgttcggtggccaggtcacggaggaggaggccgagagcctcaacaagagg 15299330 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 151 gaggagatggagaggccggcgccggtgaggaagtcccacacc 192 |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 15299049 gaggagatggagcggccggcgccggtgaggaagtcccacacc 15299090 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 363 atgctccgctcccaagtggaaggagatgac 392 ||||||||| |||||||||||||||||||| Sbjct: 15299481 atgctccgcgcccaagtggaaggagatgac 15299510 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 14 cattcgactccactccactctcc 36 ||||||||||||||||||||||| Sbjct: 3050770 cattcgactccactccactctcc 3050748 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 143 cggaggaggaggagatggagaggcc 167 |||||||||||||||||| |||||| Sbjct: 10577327 cggaggaggaggagatggggaggcc 10577303
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 97.6 bits (49), Expect = 3e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 301 aaggtggtgttcggcgggcaggtcacggaggaggaggccgagagcctcaacaagagg 357 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 15293808 aaggtggtgttcggtggccaggtcacggaggaggaggccgagagcctcaacaagagg 15293864 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 151 gaggagatggagaggccggcgccggtgaggaagtcccacacc 192 |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 15293583 gaggagatggagcggccggcgccggtgaggaagtcccacacc 15293624 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 363 atgctccgctcccaagtggaaggagatgac 392 ||||||||| |||||||||||||||||||| Sbjct: 15294015 atgctccgcgcccaagtggaaggagatgac 15294044 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 14 cattcgactccactccactctcc 36 ||||||||||||||||||||||| Sbjct: 3050881 cattcgactccactccactctcc 3050859 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 143 cggaggaggaggagatggagaggcc 167 |||||||||||||||||| |||||| Sbjct: 10575428 cggaggaggaggagatggggaggcc 10575404
>emb|AJ851688.1| Gallus gallus mRNA for hypothetical protein, clone 17n23 Length = 6469 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggagaggccggcgccggtgagg 180 ||||||||||||||||||||||| |||| ||||||| Sbjct: 4796 ggaggaggaggagatggagaggcaggcgtaggtgagg 4760
>ref|XM_529425.1| PREDICTED: Pan troglodytes LOC451386 (LOC451386), mRNA Length = 872 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 145 gaggaggaggagatggagaggcc 167 ||||||||||||||||||||||| Sbjct: 278 gaggaggaggagatggagaggcc 256
>gb|AY596573.1| Saccharum officinarum clone SCCCLR1C01D11, complete sequence Length = 1372 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 157 atggagaggccggcgccggtgaggaagtcccacaccaacacggccga 203 ||||||||| ||| |||||| ||||| | ||||||||||||||||| Sbjct: 154 atggagagggcggtgccggttcggaagccgcacaccaacacggccga 200
>gb|AF254982.4| Homo sapiens chromosome 21 clone CTD-2503J9 map p11-q21.1, complete sequence Length = 211345 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 11 ttccattcgactccactccactc 33 ||||||||||||||||||||||| Sbjct: 88809 ttccattcgactccactccactc 88787 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 ccttccattcgactccactccactc 33 |||||||||| |||||||||||||| Sbjct: 103223 ccttccattccactccactccactc 103199 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 6 cttccttccattcgactccactccactc 33 |||| |||||||| |||||||||||||| Sbjct: 97943 cttcattccattccactccactccactc 97916
>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0011L14, complete sequence Length = 117974 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 14 cattcgactccactccactctcc 36 ||||||||||||||||||||||| Sbjct: 45491 cattcgactccactccactctcc 45513
>dbj|AK103362.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126N07, full insert sequence Length = 2101 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 14 cattcgactccactccactctcc 36 ||||||||||||||||||||||| Sbjct: 126 cattcgactccactccactctcc 104
>dbj|AP003965.2| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-31O9, complete sequence Length = 121852 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 145 gaggaggaggagatggagaggcc 167 ||||||||||||||||||||||| Sbjct: 35667 gaggaggaggagatggagaggcc 35689
>dbj|AP005233.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-211G23, complete sequence Length = 157200 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 145 gaggaggaggagatggagaggcc 167 ||||||||||||||||||||||| Sbjct: 58634 gaggaggaggagatggagaggcc 58656
>ref|NM_185426.2| Oryza sativa (japonica cultivar-group), mRNA Length = 960 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggagagg 165 |||||||||||||||||||||| Sbjct: 119 ggaggaggaggagatggagagg 140
>ref|XM_954697.1| Neurospora crassa OR74A hypothetical protein (NCU02369.1) partial mRNA Length = 1140 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggagagg 165 |||||||||||||||||||||| Sbjct: 315 ggaggaggaggagatggagagg 294
>ref|XM_331144.1| Neurospora crassa OR74A hypothetical protein (NCU02369.1) partial mRNA Length = 1140 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggagagg 165 |||||||||||||||||||||| Sbjct: 315 ggaggaggaggagatggagagg 294
>gb|AY596563.1| Saccharum officinarum clone SCJLLR2013G10, complete sequence Length = 1194 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 301 aaggtggtgttcggcgggcaggtcacggaggagg 334 ||||||||||| || ||||||||||| ||||||| Sbjct: 229 aaggtggtgtttggggggcaggtcaccgaggagg 262 Score = 44.1 bits (22), Expect = 0.37 Identities = 55/66 (83%) Strand = Plus / Plus Query: 153 ggagatggagaggccggcgccggtgaggaagtcccacaccaacacggccgatctgctggc 212 ||||||||||||| |||| || ||||||| ||||||||| ||||||| ||||| || Sbjct: 99 ggagatggagagggcggcccccgtgaggagttcccacacctcgacggccggcctgctcgc 158 Query: 213 gtggcc 218 |||||| Sbjct: 159 gtggcc 164
>gb|AC122895.5| Mus musculus BAC clone RP23-69K14 from chromosome 18, complete sequence Length = 215539 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggagagg 165 |||||||||||||||||||||| Sbjct: 113622 ggaggaggaggagatggagagg 113643
>gb|AC146680.3| Gasterosteus aculeatus clone CH213-10I3, complete sequence Length = 214256 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 145 gaggaggaggagatggagaggccggcgccg 174 ||||||||||||| |||| ||||||||||| Sbjct: 33666 gaggaggaggagaaggagcggccggcgccg 33695
>emb|AL670399.4| Mouse DNA sequence from clone RP23-263M10 on chromosome 11 Contains the 3' end of the Atp2a3 gene for ubiquitous Ca++ transporting ATPase, the P2rx1 and P2rx5 genes for purinergic receptor P2X ligand-gated ion channel 1 and 5, 111 novel genes, the Camkk1 gene for calcium/calmodulin-dependent protein kinase kinase 1 alpha, the Itgae gene for epithelial-associated integrin alpha E, the Gsg2 gene for germ cell-specific gene 2 protein, the gene for a novel protein similar to human tax interacting protein 1, the Ctns gene for nephropathic cystinosis protein and five CpG islands, complete sequence Length = 224037 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 31 ctctcccaccccaccctcaccc 52 |||||||||||||||||||||| Sbjct: 170815 ctctcccaccccaccctcaccc 170794
>gb|AC073880.5|AC073880 Homo sapiens BAC clone RP11-1136L22 from Y, complete sequence Length = 34210 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 tccattcgactccactccactc 33 |||||||||||||||||||||| Sbjct: 18441 tccattcgactccactccactc 18420
>gb|AC069323.5|AC069323 Homo sapiens BAC clone RP11-1126J10 from Y, complete sequence Length = 39401 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 tccattcgactccactccactc 33 |||||||||||||||||||||| Sbjct: 35157 tccattcgactccactccactc 35178
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggagagg 165 |||||||||||||||||||||| Sbjct: 842993 ggaggaggaggagatggagagg 842972 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 actccactccactctcccacc 40 ||||||||||||||||||||| Sbjct: 28918495 actccactccactctcccacc 28918515
>gb|AC009965.9| Homo sapiens BAC clone RP11-388A17 from 2, complete sequence Length = 181700 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 tccattcgactccactccactc 33 |||||||||||||||||||||| Sbjct: 95648 tccattcgactccactccactc 95627
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggagagg 165 |||||||||||||||||||||| Sbjct: 126127 ggaggaggaggagatggagagg 126106
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019F11 Length = 123673 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggagagg 165 |||||||||||||||||||||| Sbjct: 23888 ggaggaggaggagatggagagg 23867
>dbj|AK122142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136J12, full insert sequence Length = 1035 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggagagg 165 |||||||||||||||||||||| Sbjct: 172 ggaggaggaggagatggagagg 193
>dbj|AK098848.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D16, full insert sequence Length = 960 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggagagg 165 |||||||||||||||||||||| Sbjct: 119 ggaggaggaggagatggagagg 140
>dbj|AK061552.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B09, full insert sequence Length = 1057 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggagagg 165 |||||||||||||||||||||| Sbjct: 194 ggaggaggaggagatggagagg 215
>gb|AC174471.2| Mus musculus BAC clone RP23-360P3 from chromosome 17, complete sequence Length = 218275 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggagagg 165 |||||||||||||||||||||| Sbjct: 52176 ggaggaggaggagatggagagg 52197
>gb|AC132453.3| Mus musculus BAC clone RP23-200J18 from 6, complete sequence Length = 206248 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggagagg 165 |||||||||||||||||||||| Sbjct: 76831 ggaggaggaggagatggagagg 76852
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940130D9, complete sequence Length = 117683 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 202 gatctgctggcgtggccggagggcg 226 ||||||||||| ||||||||||||| Sbjct: 35128 gatctgctggcctggccggagggcg 35104
>gb|AY691329.1| Danio rerio myosin VIa (myo6a) mRNA, complete cds Length = 4074 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggagag 164 ||||||||||||||||||||| Sbjct: 2799 ggaggaggaggagatggagag 2819
>gb|DQ017633.1| Danio rerio VDR-B mRNA, partial cds Length = 1260 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 ggtgttcggcgggcaggtcac 326 ||||||||||||||||||||| Sbjct: 1236 ggtgttcggcgggcaggtcac 1256
>emb|CR936360.14| Human DNA sequence from clone RP13-440N7 on chromosome X, complete sequence Length = 154563 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 gaggaggaggagatggagagg 165 ||||||||||||||||||||| Sbjct: 52414 gaggaggaggagatggagagg 52434 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gcggaggaggaggagatgga 161 |||||||||||||||||||| Sbjct: 52815 gcggaggaggaggagatgga 52834 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 52296 ggaggaggaggagatggaga 52315
>gb|AC124727.4| Mus musculus BAC clone RP23-465O22 from chromosome 3, complete sequence Length = 181528 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 gaggaggaggagatggagagg 165 ||||||||||||||||||||| Sbjct: 82833 gaggaggaggagatggagagg 82813
>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence Length = 242112 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gcggaggaggaggagatggag 162 ||||||||||||||||||||| Sbjct: 139625 gcggaggaggaggagatggag 139645
>gb|AC084109.2| Mus musculus strain C57BL6/J chromosome 5 clone RP23-38B15, complete sequence Length = 149453 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 29 cactctcccaccccaccctcaccctcgcc 57 |||||||||||||||||| ||||| |||| Sbjct: 32998 cactctcccaccccacccccacccccgcc 33026
>gb|AC162035.5| Mus musculus chromosome 18, clone RP23-434N7, complete sequence Length = 200472 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggagag 164 ||||||||||||||||||||| Sbjct: 8397 ggaggaggaggagatggagag 8417
>emb|CR388371.8| Zebrafish DNA sequence from clone DKEY-78N12 in linkage group 6, complete sequence Length = 185878 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 ggtgttcggcgggcaggtcac 326 ||||||||||||||||||||| Sbjct: 170581 ggtgttcggcgggcaggtcac 170601
>emb|BX908402.3| Human DNA sequence from clone WI2-87136C11 on chromosome X, complete sequence Length = 36556 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 gaggaggaggagatggagagg 165 ||||||||||||||||||||| Sbjct: 26571 gaggaggaggagatggagagg 26591 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gcggaggaggaggagatgga 161 |||||||||||||||||||| Sbjct: 26972 gcggaggaggaggagatgga 26991 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 26453 ggaggaggaggagatggaga 26472
>emb|BX649635.3| Human DNA sequence from clone WI2-82904A1 on chromosome X, complete sequence Length = 43709 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 gaggaggaggagatggagagg 165 ||||||||||||||||||||| Sbjct: 15947 gaggaggaggagatggagagg 15967 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gcggaggaggaggagatgga 161 |||||||||||||||||||| Sbjct: 16348 gcggaggaggaggagatgga 16367 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 15829 ggaggaggaggagatggaga 15848
>ref|XM_795446.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC589082 (LOC589082), mRNA Length = 1356 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gcggaggaggaggagatggag 162 ||||||||||||||||||||| Sbjct: 101 gcggaggaggaggagatggag 121
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940141D9, complete sequence Length = 117679 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 gatctgctggcgtggccggagggcg 226 ||||||||||| ||||||||||||| Sbjct: 82553 gatctgctggcctggccggagggcg 82577
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gtccaggccgagctttcgccg 139 ||||||||||||||||||||| Sbjct: 3459223 gtccaggccgagctttcgccg 3459203
>emb|AL645685.12| Mouse DNA sequence from clone RP23-198I4 on chromosome 1 Contains a ribosomal protein S13 (Rps13) pseudogene, a ribosomal protein S27 (Rps27) pseudogene a novel genes and the 3' end of a novel gene, complete sequence Length = 218950 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 ctcccaccccaccctcaccct 53 ||||||||||||||||||||| Sbjct: 78959 ctcccaccccaccctcaccct 78979
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0036G02, from chromosome 3, complete sequence Length = 153308 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 143 cggaggaggaggagatggagaggcc 167 |||||||||||||||||| |||||| Sbjct: 133140 cggaggaggaggagatggggaggcc 133116
>gb|AC011495.8| Homo sapiens chromosome 19 clone CTB-33G10, complete sequence Length = 209844 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 ctccactctcccaccccaccc 46 ||||||||||||||||||||| Sbjct: 64747 ctccactctcccaccccaccc 64727
>gb|AC153566.12| Mus musculus 10 BAC RP23-5H4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208610 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggagag 164 ||||||||||||||||||||| Sbjct: 90453 ggaggaggaggagatggagag 90473
>ref|XM_703524.1| PREDICTED: Danio rerio similar to vitamin D receptor, transcript variant 4 (LOC564511), mRNA Length = 1860 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 ggtgttcggcgggcaggtcac 326 ||||||||||||||||||||| Sbjct: 1836 ggtgttcggcgggcaggtcac 1856
>ref|XM_703523.1| PREDICTED: Danio rerio similar to vitamin D receptor, transcript variant 3 (LOC564511), mRNA Length = 1866 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 ggtgttcggcgggcaggtcac 326 ||||||||||||||||||||| Sbjct: 1842 ggtgttcggcgggcaggtcac 1862
>ref|XM_703522.1| PREDICTED: Danio rerio similar to vitamin D receptor, transcript variant 2 (LOC564511), mRNA Length = 1854 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 ggtgttcggcgggcaggtcac 326 ||||||||||||||||||||| Sbjct: 1830 ggtgttcggcgggcaggtcac 1850
>ref|XM_681891.1| PREDICTED: Danio rerio similar to vitamin D receptor, transcript variant 1 (LOC564511), mRNA Length = 1875 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 ggtgttcggcgggcaggtcac 326 ||||||||||||||||||||| Sbjct: 1851 ggtgttcggcgggcaggtcac 1871
>emb|BX927128.9| Mouse DNA sequence from clone RP23-456O15 on chromosome X, complete sequence Length = 78148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 tcccaccccaccctcaccctc 54 ||||||||||||||||||||| Sbjct: 38438 tcccaccccaccctcaccctc 38418
>gb|AC160651.2| Pan troglodytes BAC clone CH251-489P13 from chromosome unknown, complete sequence Length = 209305 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggagag 164 ||||||||||||||||||||| Sbjct: 5799 ggaggaggaggagatggagag 5779
>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468G03 Length = 143918 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 actccactccactctcccacc 40 ||||||||||||||||||||| Sbjct: 68539 actccactccactctcccacc 68559
>dbj|BS000119.1| Pan troglodytes chromosome 22 clone:RP43-001G01, map 22, complete sequences Length = 101525 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 ccactctcccaccccaccctc 48 ||||||||||||||||||||| Sbjct: 97633 ccactctcccaccccaccctc 97613
>dbj|AK102835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109K01, full insert sequence Length = 2984 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 actccactccactctcccacc 40 ||||||||||||||||||||| Sbjct: 8 actccactccactctcccacc 28
>dbj|AP001727.1| Homo sapiens genomic DNA, chromosome 21q, section 71/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 ccactctcccaccccaccctc 48 ||||||||||||||||||||| Sbjct: 236225 ccactctcccaccccaccctc 236205
>gb|AC161446.3| Mus musculus BAC clone RP24-260B15 from chromosome 13, complete sequence Length = 181988 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 cactccactctcccaccccaccctc 48 |||||||| |||||||||||||||| Sbjct: 113875 cactccaccctcccaccccaccctc 113851
>gb|M14948.1|HUMRASR1 Human R-ras gene, exon 1 Length = 2336 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ctccactctcccaccccaccc 46 ||||||||||||||||||||| Sbjct: 2179 ctccactctcccaccccaccc 2199
>dbj|AP000704.2| Homo sapiens genomic DNA, chromosome 21q22.2, BAC clone:KB318C2, CBR1-HLCS region Length = 122672 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 ccactctcccaccccaccctc 48 ||||||||||||||||||||| Sbjct: 73414 ccactctcccaccccaccctc 73394
>dbj|AP000149.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone D47-S479, segment 1/16, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 ccactctcccaccccaccctc 48 ||||||||||||||||||||| Sbjct: 66673 ccactctcccaccccaccctc 66653
>dbj|AP000008.1| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 1/13 Length = 100000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 ccactctcccaccccaccctc 48 ||||||||||||||||||||| Sbjct: 66673 ccactctcccaccccaccctc 66653
>dbj|AP001435.2| Homo sapiens genomic DNA, chromosome 21q22.2, clone:T486, LB7T-ERG region, complete sequence Length = 83059 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 ccactctcccaccccaccctc 48 ||||||||||||||||||||| Sbjct: 33880 ccactctcccaccccaccctc 33860
>gb|AC159998.6| Mus musculus BAC clone RP24-576J22 from chromosome 10, complete sequence Length = 166313 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 141211 ggaggaggaggagatggaga 141192
>gb|AC114537.6| Mus musculus chromosome 15, clone RP23-51A16, complete sequence Length = 189760 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 106273 ggaggaggaggagatggaga 106254
>gb|AC159318.4| Mus musculus BAC clone RP23-76M13 from chromosome 12, complete sequence Length = 269200 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 252928 ggaggaggaggagatggaga 252947
>gb|AC165162.4| Mus musculus BAC clone RP23-173L24 from chromosome 3, complete sequence Length = 211699 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 15373 ggaggaggaggagatggaga 15354
>ref|XM_509530.1| PREDICTED: Pan troglodytes LOC452426 (LOC452426), mRNA Length = 4989 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 ggaggccgagagcctcaaca 352 |||||||||||||||||||| Sbjct: 2982 ggaggccgagagcctcaaca 3001
>ref|NM_190210.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2247 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 cggaggaggaggagatggag 162 |||||||||||||||||||| Sbjct: 1022 cggaggaggaggagatggag 1041
>ref|XM_472718.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 918 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 157 atggagaggccggcgccggtgaggaagtcccacacc 192 ||||||||| ||| ||||||||||||| | |||||| Sbjct: 1 atggagagggcggtgccggtgaggaagccgcacacc 36
>gb|AC112953.15| Mus musculus chromosome 7, clone RP23-44J21, complete sequence Length = 205513 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 88153 ggaggaggaggagatggaga 88134
>gb|AY618702.1| Danio rerio myosin VIa (myo6a) mRNA, complete cds Length = 5022 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gaggaggaggagatggagag 164 |||||||||||||||||||| Sbjct: 2757 gaggaggaggagatggagag 2776
>ref|XM_601920.2| PREDICTED: Bos taurus similar to Immediate early response gene 5 protein (LOC523618), mRNA Length = 2632 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 1446 ggaggaggaggagatggaga 1465
>gb|BC072478.1| Rattus norvegicus Down syndrome critical region homolog 1 (human), mRNA (cDNA clone MGC:91448 IMAGE:7103498), complete cds Length = 2165 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gaggaggaggagatggagag 164 |||||||||||||||||||| Sbjct: 573 gaggaggaggagatggagag 592
>ref|NM_153724.2| Rattus norvegicus Down syndrome critical region homolog 1 (human) (Dscr1), mRNA Length = 2165 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gaggaggaggagatggagag 164 |||||||||||||||||||| Sbjct: 573 gaggaggaggagatggagag 592
>gb|AC138790.2| Mus musculus BAC clone RP23-292H23 from chromosome 19, complete sequence Length = 197765 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 cccaccccaccctcaccctc 54 |||||||||||||||||||| Sbjct: 39885 cccaccccaccctcaccctc 39904
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 cgacggggccacgccgccgc 262 |||||||||||||||||||| Sbjct: 5761802 cgacggggccacgccgccgc 5761821
>gb|AC154442.3| Mus musculus BAC clone RP24-178L2 from chromosome 17, complete sequence Length = 177231 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 8292 ggaggaggaggagatggaga 8311
>ref|XM_910335.2| PREDICTED: Mus musculus synovial sarcoma, X member A, breakpoint 1 (Ssxa1), mRNA Length = 661 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 568 ggaggaggaggagatggaga 587
>gb|AC175749.2| Pan troglodytes BAC clone CH251-1124N9 from chromosome y, complete sequence Length = 176979 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 ttccattcgactccactccactct 34 |||||||| ||||||||||||||| Sbjct: 22090 ttccattccactccactccactct 22113 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 ccttccattcgactccactccact 32 |||||||||| ||||||||||||| Sbjct: 15246 ccttccattccactccactccact 15269
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 agggcgcgcagccggagctcgtcg 244 |||||||||||||||| ||||||| Sbjct: 1664839 agggcgcgcagccggacctcgtcg 1664862
>gb|AC110815.6| Mus musculus BAC clone RP23-2I10 from chromosome 12, complete sequence Length = 186797 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 83226 ggaggaggaggagatggaga 83245
>gb|AC134328.2| Mus musculus BAC clone RP24-299H18 from chromosome 12, complete sequence Length = 189420 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 137835 ggaggaggaggagatggaga 137816
>gb|AF370366.1| Homo sapiens FP1193 mRNA, complete cds Length = 2222 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 ggaggccgagagcctcaaca 352 |||||||||||||||||||| Sbjct: 393 ggaggccgagagcctcaaca 412
>ref|XM_883469.1| Leishmania major strain Friedlin hypothetical protein (P1105.08) partial mRNA Length = 459 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ccacgccgccgcccaaccgccgcc 274 |||||||||||||| ||||||||| Sbjct: 48 ccacgccgccgccccaccgccgcc 71
>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end Length = 247462 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 ccacgccgccgcccaaccgccgcc 274 |||||||||||||| ||||||||| Sbjct: 50799 ccacgccgccgccccaccgccgcc 50776
>gb|AC134834.3| Mus musculus BAC clone RP24-320P15 from chromosome 18, complete sequence Length = 169143 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 125461 ggaggaggaggagatggaga 125480
>gb|AC124444.4| Mus musculus BAC clone RP24-185P7 from chromosome 7, complete sequence Length = 184996 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 aggaggaggagatggagagg 165 |||||||||||||||||||| Sbjct: 111410 aggaggaggagatggagagg 111391
>gb|AC125460.4| Mus musculus BAC clone RP24-448D10 from chromosome 15, complete sequence Length = 205859 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 9113 ggaggaggaggagatggaga 9094
>gb|AC124376.4| Mus musculus BAC clone RP24-573J18 from chromosome 15, complete sequence Length = 139636 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 87660 ggaggaggaggagatggaga 87641
>gb|AC138619.4| Mus musculus BAC clone RP23-278M16 from chromosome 18, complete sequence Length = 170250 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 92011 ggaggaggaggagatggaga 91992
>gb|AC125187.4| Mus musculus BAC clone RP23-302N11 from chromosome 7, complete sequence Length = 247402 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ctcccaccccaccctcaccc 52 |||||||||||||||||||| Sbjct: 137594 ctcccaccccaccctcaccc 137575
>gb|AC098726.2| Mus musculus BAC clone RP23-3E20 from 17, complete sequence Length = 195690 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 157848 ggaggaggaggagatggaga 157867
>gb|AC122912.2| Mus musculus BAC clone RP23-61E5 from 7, complete sequence Length = 255062 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 aggaggaggagatggagagg 165 |||||||||||||||||||| Sbjct: 241266 aggaggaggagatggagagg 241285
>gb|AC003092.1| Homo sapiens BAC clone CTA-335O22 from 7, complete sequence Length = 108878 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 33527 ggaggaggaggagatggaga 33546
>ref|XM_854554.1| PREDICTED: Canis familiaris similar to Dedicator of cytokinesis protein 8, transcript variant 7 (LOC476333), mRNA Length = 5132 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gaggaggaggagatggagag 164 |||||||||||||||||||| Sbjct: 1141 gaggaggaggagatggagag 1160
>ref|XM_854522.1| PREDICTED: Canis familiaris similar to Dedicator of cytokinesis protein 8, transcript variant 6 (LOC476333), mRNA Length = 5078 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gaggaggaggagatggagag 164 |||||||||||||||||||| Sbjct: 1141 gaggaggaggagatggagag 1160
>ref|XM_854424.1| PREDICTED: Canis familiaris similar to Dedicator of cytokinesis protein 8, transcript variant 3 (LOC476333), mRNA Length = 6330 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gaggaggaggagatggagag 164 |||||||||||||||||||| Sbjct: 2339 gaggaggaggagatggagag 2358
>gb|AC120000.17| Mus musculus chromosome 3, clone RP24-133F9, complete sequence Length = 149389 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 125170 ggaggaggaggagatggaga 125189
>gb|AC146121.3| Pan troglodytes BAC clone RP43-4M8 from 7, complete sequence Length = 153260 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 136926 ggaggaggaggagatggaga 136907
>emb|CR936925.7| Mouse DNA sequence from clone DN-490M13 on chromosome 11, complete sequence Length = 40913 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 28647 ggaggaggaggagatggaga 28628
>gb|BC033253.1| Homo sapiens KIAA1602, mRNA (cDNA clone IMAGE:5444737), partial cds Length = 3463 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 ggaggccgagagcctcaaca 352 |||||||||||||||||||| Sbjct: 1601 ggaggccgagagcctcaaca 1620
>gb|BC007998.1| Homo sapiens KIAA1602, mRNA (cDNA clone IMAGE:3357389), partial cds Length = 2348 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 ggaggccgagagcctcaaca 352 |||||||||||||||||||| Sbjct: 604 ggaggccgagagcctcaaca 623
>emb|AL662906.4| Human DNA sequence from clone RP11-111I12 on chromosome 1 Contains a novel gene, complete sequence Length = 134028 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 76395 ggaggaggaggagatggaga 76376
>emb|AL513327.34| Human DNA sequence from clone RP11-415J8 on chromosome 1 Contains the gene for a novel protein (FLJ35476), the gene for a novel protein similar to ABO family protein, two novel genes, the PHC2 gene for polyhomeotic-like 2 (Drosophila) and two CpG islands, complete sequence Length = 188665 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ctcccaccccaccctcaccc 52 |||||||||||||||||||| Sbjct: 105405 ctcccaccccaccctcaccc 105424 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ctcccaccccaccctcaccc 52 |||||||||||||||||||| Sbjct: 105382 ctcccaccccaccctcaccc 105401 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ctcccaccccaccctcaccc 52 |||||||||||||||||||| Sbjct: 105359 ctcccaccccaccctcaccc 105378
>emb|AL353652.17| Human DNA sequence from clone RP11-279F15 on chromosome 13 Contains a CpG island, complete sequence Length = 126837 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gagaggccggcgccggtgaggaag 183 |||||||||||||||| ||||||| Sbjct: 117334 gagaggccggcgccggggaggaag 117357 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gagaggccggcgccggtgaggaag 183 |||||||||||||||| ||||||| Sbjct: 110769 gagaggccggcgccggggaggaag 110792 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gagaggccggcgccggtgaggaag 183 |||||||||||||||| ||||||| Sbjct: 104198 gagaggccggcgccggggaggaag 104221 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gagaggccggcgccggtgaggaag 183 |||||||||||||||| ||||||| Sbjct: 97625 gagaggccggcgccggggaggaag 97648 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gagaggccggcgccggtgaggaag 183 |||||||||||||||| ||||||| Sbjct: 91055 gagaggccggcgccggggaggaag 91078
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 cgacggggccacgccgccgc 262 |||||||||||||||||||| Sbjct: 925896 cgacggggccacgccgccgc 925877
>gb|AY192140.1| Malurus leucopterus leuconotus WW030 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192138.1| Malurus leucopterus leuconotus WW040 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192137.1| Malurus leucopterus leuconotus SAR7201 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192136.1| Malurus leucopterus leuconotus SAR7199 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192135.1| Malurus leucopterus leuconotus SAR7203 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192134.1| Malurus leucopterus leuconotus SAR7202 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192133.1| Malurus leucopterus leuconotus D093 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192132.1| Malurus leucopterus leuconotus D086 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192131.1| Malurus leucopterus leuconotus D085 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192130.1| Malurus leucopterus leuconotus D075 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192129.1| Malurus leucopterus leuconotus D084 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192128.1| Malurus leucopterus leuconotus MV2512 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192127.1| Malurus leucopterus leuconotus SVE1267 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192126.1| Malurus leucopterus leuconotus SVE1265 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192125.1| Malurus leucopterus leucopterus DH309 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192124.1| Malurus leucopterus leucopterus DH239 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192123.1| Malurus leucopterus leucopterus DH141 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192122.1| Malurus leucopterus leucopterus DH98 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192121.1| Malurus leucopterus leucopterus DH60 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192120.1| Malurus leucopterus leucopterus DH81 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192119.1| Malurus leucopterus leucopterus A26806 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192118.1| Malurus leucopterus leucopterus A26802 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192117.1| Malurus leucopterus leucopterus A26804 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192116.1| Malurus leucopterus leucopterus A26803 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192115.1| Malurus leucopterus edouardi BW001 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192114.1| Malurus leucopterus edouardi BW007 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192113.1| Malurus leucopterus edouardi BW006 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192112.1| Malurus leucopterus edouardi BW002 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192111.1| Malurus leucopterus edouardi BW011 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192110.1| Malurus leucopterus edouardi BW003 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192109.1| Malurus leucopterus edouardi BW038 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AY192108.1| Malurus leucopterus edouardi BW024 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial gene for mitochondrial product Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ccccaccctcaccctcgcct 58 |||||||||||||||||||| Sbjct: 252 ccccaccctcaccctcgcct 271
>gb|AC122210.5| Mus musculus BAC clone RP23-96G7 from chromosome 10, complete sequence Length = 231988 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 25649 ggaggaggaggagatggaga 25630
>gb|AC163012.4| Mus musculus chromosome 8, clone RP23-22A17, complete sequence Length = 211779 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 184548 ggaggaggaggagatggaga 184529
>gb|AC153837.4| Mus musculus 6 BAC RP23-192D5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232039 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 actccactctcccaccccaccctc 48 ||||||||| |||||||||||||| Sbjct: 139992 actccactcccccaccccaccctc 140015
>emb|AL663049.8| Mouse DNA sequence from clone RP23-198N8 on chromosome 11 Contains the Mor2 gene for soluble malate dehydrogenase, a novel gene, a phosphoglycerate mutase (Pgam) pseudogene and a CpG island, complete sequence Length = 203295 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 155604 ggaggaggaggagatggaga 155585
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15, complete sequence Length = 143109 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 157 atggagaggccggcgccggtgaggaagtcccacacc 192 ||||||||| ||| ||||||||||||| | |||||| Sbjct: 110526 atggagagggcggtgccggtgaggaagccgcacacc 110491
>emb|AL596185.12| Mouse DNA sequence from clone RP23-172M21 on chromosome 11 Contains the 5' end of the Centb1 gene for centaurin beta 1, the gene for a novel protein similar to protein phosphatase 1 regulatory (inhibitor) subunit 2 Ppp1r2, a novel gene, the Gps2 gene for G protein pathway suppressor 2, the Eif5a gene for eukaryotic translation initiation factor 5A, the Ybx2 gene for Y box protein 2, the Slc2a4 gene for solute carrier family 2 (facilitated glucose transporter) member 4, a non-muscle cofilin 1 (Cfl1) pseudogene, the Cldn7 gene for claudin 7, the Rai12 gene for retinoic acid induced 12, the Dullard gene for Dullard homolog (Xenopus laevis) (novel NLI interacting factor-like phosphatase), the gene for novel PHD-finger protein JUNE1, the Dvl2 gene for dishevelled 2 dsh homolog (Drosophila), the Acadvl gene for acyl-Coenzyme A dehydrogenase very long chain, the Dlgh4 gene for discs large homolog 4 (Drosophila), the Asgr1 and Asgr2 genes for asialoglycoprotein receptor 1 and 2, a ribosomal protein L26 (Rpl26) pseudogene, the 5' end of the Mgl2 gene for macrophage galactose N-acetyl-galactosamine specific lectin 2 and nine CpG islands, complete sequence Length = 248203 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 210472 ggaggaggaggagatggaga 210453
>dbj|AK097615.1| Homo sapiens cDNA FLJ40296 fis, clone TESTI2028811 Length = 1846 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gagaggccggcgccggtgaggaag 183 |||||||||||||||| ||||||| Sbjct: 452 gagaggccggcgccggggaggaag 475
>gb|AC132275.4| Mus musculus BAC clone RP24-341P14 from chromosome 3, complete sequence Length = 174425 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 43874 ggaggaggaggagatggaga 43893
>gb|AC091607.11| Homo sapiens 3 BAC RP11-118D22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175447 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 48640 ggaggaggaggagatggaga 48621
>gb|AC023232.16| Homo sapiens chromosome 11, clone RP11-793I11, complete sequence Length = 188868 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 cccaccccaccctcaccctc 54 |||||||||||||||||||| Sbjct: 54475 cccaccccaccctcaccctc 54456
>dbj|BS000654.1| Pan troglodytes chromosome Y clone:PTB-129E12, complete sequences Length = 193714 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ttccattcgactccactcca 30 |||||||||||||||||||| Sbjct: 136865 ttccattcgactccactcca 136884
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ttccattcgactccactcca 30 |||||||||||||||||||| Sbjct: 5981629 ttccattcgactccactcca 5981648
>gb|AC068058.12| Homo sapiens chromosome 10 clone RP11-285A18, complete sequence Length = 168862 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ctcccaccccaccctcaccc 52 |||||||||||||||||||| Sbjct: 19498 ctcccaccccaccctcaccc 19479
>gb|AC114402.2| Homo sapiens chromosome 1 clone RP11-397P13, complete sequence Length = 179308 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 cccaccccaccctcaccctc 54 |||||||||||||||||||| Sbjct: 7620 cccaccccaccctcaccctc 7639
>gb|AC084361.19| Homo sapiens 12 BAC RP11-364C11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172853 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 140339 ggaggaggaggagatggaga 140320
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 8 tccttccattcgactccactccactctc 35 |||||||||| | ||||||||||||||| Sbjct: 679793 tccttccattggcctccactccactctc 679820
>gb|AC158662.7| Mus musculus 6 BAC RP23-20K24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250218 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 220737 ggaggaggaggagatggaga 220718
>gb|AC103828.2| Homo sapiens chromosome 11, clone CTD1-2183M20, complete sequence Length = 136372 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 cccaccccaccctcaccctc 54 |||||||||||||||||||| Sbjct: 110219 cccaccccaccctcaccctc 110200
>ref|XM_939203.1| PREDICTED: Homo sapiens FLJ40296 protein (FLJ40296), mRNA Length = 897 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gagaggccggcgccggtgaggaag 183 |||||||||||||||| ||||||| Sbjct: 450 gagaggccggcgccggggaggaag 473
>ref|XM_937378.1| PREDICTED: Homo sapiens KIAA1602 protein (KIAA1602), mRNA Length = 4884 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 ggaggccgagagcctcaaca 352 |||||||||||||||||||| Sbjct: 3074 ggaggccgagagcctcaaca 3093
>ref|XM_035497.14| PREDICTED: Homo sapiens KIAA1602 protein (KIAA1602), mRNA Length = 4889 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 ggaggccgagagcctcaaca 352 |||||||||||||||||||| Sbjct: 3079 ggaggccgagagcctcaaca 3098
>ref|XM_930290.1| PREDICTED: Homo sapiens similar to FLJ40296 protein (LOC653826), mRNA Length = 1835 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gagaggccggcgccggtgaggaag 183 |||||||||||||||| ||||||| Sbjct: 446 gagaggccggcgccggggaggaag 469
>ref|XM_930286.1| PREDICTED: Homo sapiens similar to FLJ40296 protein (LOC653825), mRNA Length = 1835 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gagaggccggcgccggtgaggaag 183 |||||||||||||||| ||||||| Sbjct: 446 gagaggccggcgccggggaggaag 469
>ref|XM_930283.1| PREDICTED: Homo sapiens similar to FLJ40296 protein (LOC653824), mRNA Length = 1835 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gagaggccggcgccggtgaggaag 183 |||||||||||||||| ||||||| Sbjct: 446 gagaggccggcgccggggaggaag 469
>ref|XM_930280.1| PREDICTED: Homo sapiens similar to FLJ40296 protein (LOC653823), mRNA Length = 1835 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gagaggccggcgccggtgaggaag 183 |||||||||||||||| ||||||| Sbjct: 446 gagaggccggcgccggggaggaag 469
>gb|AC158525.2| Mus musculus BAC clone RP23-367E3 from chromosome 14, complete sequence Length = 179650 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 24728 ggaggaggaggagatggaga 24747
>gb|AF298076.1|AF298076 Homo sapiens clone pR-4 microsatellite III sequence Length = 1026 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ttccattcgactccactcca 30 |||||||||||||||||||| Sbjct: 549 ttccattcgactccactcca 530
>gb|AC159259.2| Mus musculus BAC clone RP24-83G17 from chromosome 3, complete sequence Length = 191517 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 179221 ggaggaggaggagatggaga 179202
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 157 atggagaggccggcgccggtgaggaagtcccacacc 192 ||||||||| ||| ||||||||||||| | |||||| Sbjct: 22773330 atggagagggcggtgccggtgaggaagccgcacacc 22773295
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 21195246 ggaggaggaggagatggaga 21195227
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 cggaggaggaggagatggag 162 |||||||||||||||||||| Sbjct: 38649720 cggaggaggaggagatggag 38649701
>gb|AC114547.12| Mus musculus chromosome 8, clone RP24-68M15, complete sequence Length = 182611 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 37544 ggaggaggaggagatggaga 37525
>gb|AC172374.4| Pan troglodytes BAC clone CH251-119H6 from chromosome y, complete sequence Length = 176115 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ttccattcgactccactcca 30 |||||||||||||||||||| Sbjct: 15285 ttccattcgactccactcca 15304
>gb|AC150909.3| Pan troglodytes BAC clone CH251-1056O7 from chromosome y, complete sequence Length = 178039 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ttccattcgactccactcca 30 |||||||||||||||||||| Sbjct: 142326 ttccattcgactccactcca 142345
>gb|AC147324.3| Pan troglodytes BAC clone RP43-41B9 from chromosome 7, complete sequence Length = 163009 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 125801 ggaggaggaggagatggaga 125820
>gb|AC159103.1| Mus musculus BAC clone RP23-424O13 from chromosome 14, complete sequence Length = 195391 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 43317 ggaggaggaggagatggaga 43336
>gb|AC156805.2| Pan troglodytes BAC clone CH251-830G14 from chromosome y, complete sequence Length = 230623 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ttccattcgactccactcca 30 |||||||||||||||||||| Sbjct: 127317 ttccattcgactccactcca 127298
>ref|NM_001004111.1| Danio rerio myosin VIa (myo6a), mRNA Length = 5022 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gaggaggaggagatggagag 164 |||||||||||||||||||| Sbjct: 2757 gaggaggaggagatggagag 2776
>gb|AC131157.4| Homo sapiens 12 BAC RP11-70F11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180907 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 ggaggccgagagcctcaaca 352 |||||||||||||||||||| Sbjct: 36450 ggaggccgagagcctcaaca 36431
>gb|AC004902.2|AC004902 Homo sapiens PAC clone RP5-823F17 from 7q36, complete sequence Length = 104154 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ttccattcgactccactcca 30 |||||||||||||||||||| Sbjct: 52471 ttccattcgactccactcca 52452
>gb|AC011293.5|AC011293 Homo sapiens BAC clone RP11-75F5 from Y, complete sequence Length = 159722 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ttccattcgactccactcca 30 |||||||||||||||||||| Sbjct: 35156 ttccattcgactccactcca 35137
>gb|AC025226.4|AC025226 Homo sapiens BAC clone RP11-57J19 from Y, complete sequence Length = 168066 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ttccattcgactccactcca 30 |||||||||||||||||||| Sbjct: 156443 ttccattcgactccactcca 156424
>gb|AE004768.1| Pseudomonas aeruginosa PAO1, section 329 of 529 of the complete genome Length = 12270 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 ggccggcgccggtgaggaag 183 |||||||||||||||||||| Sbjct: 10206 ggccggcgccggtgaggaag 10225
>gb|AE004550.1| Pseudomonas aeruginosa PAO1, section 111 of 529 of the complete genome Length = 10840 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ggagaggccggcgccggtga 178 |||||||||||||||||||| Sbjct: 1635 ggagaggccggcgccggtga 1616
>gb|AC128693.8| Homo sapiens 3 BAC RP13-563D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 143617 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 55983 ggaggaggaggagatggaga 55964
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 cggaggaggaggagatggag 162 |||||||||||||||||||| Sbjct: 107693 cggaggaggaggagatggag 107674
>ref|NM_198441.1| Homo sapiens FLJ40296 protein (FLJ40296), mRNA Length = 1846 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gagaggccggcgccggtgaggaag 183 |||||||||||||||| ||||||| Sbjct: 452 gagaggccggcgccggggaggaag 475
>gb|AC112947.8| Mus musculus chromosome 8, clone RP23-375F22, complete sequence Length = 191154 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 117215 ggaggaggaggagatggaga 117234
>emb|AL929084.11| Mouse DNA sequence from clone RP23-66M24 on chromosome 2, complete sequence Length = 183632 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tccactctcccaccccaccc 46 |||||||||||||||||||| Sbjct: 35447 tccactctcccaccccaccc 35428
>dbj|BS000046.1| Pan troglodytes chromosome 22 clone:PTB-042H12, map 22, complete sequences Length = 150162 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 gtggaaggagatgacaggaa 397 |||||||||||||||||||| Sbjct: 80767 gtggaaggagatgacaggaa 80786
>emb|BX546479.5| Human DNA sequence from clone RP11-438N17 on chromosome 22, complete sequence Length = 172294 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ttccattcgactccactcca 30 |||||||||||||||||||| Sbjct: 43563 ttccattcgactccactcca 43582
>emb|BX649014.1|HSM809165 Homo sapiens mRNA; cDNA DKFZp686H0694 (from clone DKFZp686H0694) Length = 5650 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 2257 ggaggaggaggagatggaga 2238
>dbj|AK103788.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145I18, full insert sequence Length = 1373 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 157 atggagaggccggcgccggtgaggaagtcccacacc 192 ||||||||| ||| ||||||||||||| | |||||| Sbjct: 98 atggagagggcggtgccggtgaggaagccgcacacc 133
>gb|AC103387.11| Mus musculus chromosome 3, clone RP24-383D8, complete sequence Length = 157053 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 13231 ggaggaggaggagatggaga 13250 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 13195 ggaggaggaggagatggaga 13214
>gb|AC129199.3| Mus musculus BAC clone RP24-220I4 from 7, complete sequence Length = 159262 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tccactctcccaccccaccc 46 |||||||||||||||||||| Sbjct: 83064 tccactctcccaccccaccc 83083
>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome Length = 1138011 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 agagagaaacacgagctcccccac 93 |||||||| ||||||||||||||| Sbjct: 656178 agagagaagcacgagctcccccac 656201
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 21121455 ggaggaggaggagatggaga 21121436
>gb|AC170869.2| Mus musculus BAC clone RP24-370B22 from chromosome 3, complete sequence Length = 143247 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 36248 ggaggaggaggagatggaga 36229
>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137571 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 94954 ggaggaggaggagatggaga 94973
>gb|AC132410.4| Mus musculus BAC clone RP23-348E10 from 8, complete sequence Length = 175530 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 84000 ggaggaggaggagatggaga 83981
>gb|AC152412.2| Mus musculus BAC clone RP23-383B18 from 7, complete sequence Length = 196399 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 aggaggaggagatggagagg 165 |||||||||||||||||||| Sbjct: 183150 aggaggaggagatggagagg 183131
>gb|AC140330.3| Mus musculus BAC clone RP23-410I24 from 6, complete sequence Length = 185681 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 21 ctccactccactctcccaccccaccctc 48 ||||||||||||||||| || ||||||| Sbjct: 65039 ctccactccactctcccccctcaccctc 65066
>gb|U60263.1|CGU60263 Cricetulus griseus Adapt78 (adapt78) mRNA, complete cds Length = 2216 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gaggaggaggagatggagag 164 |||||||||||||||||||| Sbjct: 574 gaggaggaggagatggagag 593
>emb|CT030126.6| Mouse DNA sequence from clone RP23-430F12 on chromosome 12, complete sequence Length = 208848 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 152269 ggaggaggaggagatggaga 152288
>dbj|AP006667.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT31L14, TM0366, complete sequence Length = 100936 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 cccaccccaccctcaccctc 54 |||||||||||||||||||| Sbjct: 68084 cccaccccaccctcaccctc 68065
>dbj|AP006133.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09O08, TM0231a, complete sequence Length = 64124 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 gaggaggaggagatggagag 164 |||||||||||||||||||| Sbjct: 3466 gaggaggaggagatggagag 3447
>gb|U51450.1|GCU51450 Ginglymostoma cirratum novel immunoglobulin class IgNARC mRNA, complete cds Length = 2717 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 actccactccactctcccac 39 |||||||||||||||||||| Sbjct: 1294 actccactccactctcccac 1275
>gb|L28170.1|PSERHTR Pseudomonas aeruginosa rhamnosyl transferase genes and regulatory protein gene, complete cds Length = 4387 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ggccggcgccggtgaggaag 183 |||||||||||||||||||| Sbjct: 2374 ggccggcgccggtgaggaag 2355
>emb|AL808017.4| Mouse DNA sequence from clone RP23-145G21 on chromosome X, complete sequence Length = 183291 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 172046 ggaggaggaggagatggaga 172065
>gb|J00800.1|RATUG11 Rat U1 small nuclear RNA gene, clone 6-6(A) Length = 1013 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 903 ggaggaggaggagatggaga 922
>dbj|AB075973.1| Rattus norvegicus mcip 1 mRNA for myocyte-enriched calcineurin-interacting protein 1, complete cds Length = 626 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gaggaggaggagatggagag 164 |||||||||||||||||||| Sbjct: 529 gaggaggaggagatggagag 548
>gb|AC107884.15| Homo sapiens chromosome 11, clone CTD-2516F10, complete sequence Length = 177416 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tccactctcccaccccaccc 46 |||||||||||||||||||| Sbjct: 63941 tccactctcccaccccaccc 63960
>dbj|AB046822.1| Homo sapiens mRNA for KIAA1602 protein, partial cds Length = 4235 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 ggaggccgagagcctcaaca 352 |||||||||||||||||||| Sbjct: 2026 ggaggccgagagcctcaaca 2045
>emb|AL671922.16| Mouse DNA sequence from clone RP23-295K1 on chromosome X, complete sequence Length = 144463 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggaggaggaggagatggaga 163 |||||||||||||||||||| Sbjct: 11922 ggaggaggaggagatggaga 11941 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,076,941 Number of Sequences: 3902068 Number of extensions: 6076941 Number of successful extensions: 182686 Number of sequences better than 10.0: 225 Number of HSP's better than 10.0 without gapping: 230 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 179085 Number of HSP's gapped (non-prelim): 3595 length of query: 431 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 409 effective length of database: 17,147,199,772 effective search space: 7013204706748 effective search space used: 7013204706748 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
