ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast58f04 |
|---|---|
| Clone Library Name | barley_pub |
>RBSK_BACHD (Q9K6K1) Ribokinase (EC 2.7.1.15)| Length = 294 Score = 50.4 bits (119), Expect = 2e-06 Identities = 29/72 (40%), Positives = 38/72 (52%) Frame = +3 Query: 210 GSANADIYVEVNRLPLVGETVAASAGHSLAGGKGANQAACGGRLAMGPTYLVARVGDDAN 389 GS N D+ + +P+ GETV ++ GGKGANQA RL ++ RVGDD Sbjct: 10 GSINMDMVTITDVVPVQGETVLGKDFRTVPGGKGANQAVAAARLGAN-VRMIGRVGDDPF 68 Query: 390 GRLLEGALADAG 425 G +L LA G Sbjct: 69 GHVLTENLAKEG 80
>RBSK_YEAST (P25332) Probable ribokinase (EC 2.7.1.15)| Length = 333 Score = 50.4 bits (119), Expect = 2e-06 Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 4/76 (5%) Frame = +3 Query: 210 GSANADIYVEVNRLPLVGETVAASAGHSLAGGKGANQAACGGRL----AMGPTYLVARVG 377 GS N D+ +RLP GET A+ + AGGKG NQAA G+L + ++ VG Sbjct: 7 GSLNYDLDTFTDRLPNAGETFRANHFETHAGGKGLNQAAAIGKLKNPSSRYSVRMIGNVG 66 Query: 378 DDANGRLLEGALADAG 425 +D G+ L+ L+D G Sbjct: 67 NDTFGKQLKDTLSDCG 82
>RBSK_BACSU (P36945) Ribokinase (EC 2.7.1.15)| Length = 293 Score = 49.3 bits (116), Expect = 4e-06 Identities = 25/61 (40%), Positives = 36/61 (59%) Frame = +3 Query: 210 GSANADIYVEVNRLPLVGETVAASAGHSLAGGKGANQAACGGRLAMGPTYLVARVGDDAN 389 GS + D+ V ++ P GETV ++ ++ GGKGANQA RL ++V +VGDD Sbjct: 8 GSCSMDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLG-AQVFMVGKVGDDHY 66 Query: 390 G 392 G Sbjct: 67 G 67
>RBSK_LACLA (Q9CF42) Ribokinase (EC 2.7.1.15)| Length = 300 Score = 47.8 bits (112), Expect = 1e-05 Identities = 25/61 (40%), Positives = 32/61 (52%) Frame = +3 Query: 210 GSANADIYVEVNRLPLVGETVAASAGHSLAGGKGANQAACGGRLAMGPTYLVARVGDDAN 389 GS + D+ NR+P GETV + GGKGANQA RL+ ++ VG DA Sbjct: 8 GSISMDLVTRTNRVPNAGETVFGEDFAMVPGGKGANQAVAFARLSPNEVSMIGAVGKDAF 67 Query: 390 G 392 G Sbjct: 68 G 68
>RBSK_ECOLI (P0A9J6) Ribokinase (EC 2.7.1.15)| Length = 309 Score = 45.1 bits (105), Expect = 7e-05 Identities = 27/69 (39%), Positives = 34/69 (49%) Frame = +3 Query: 210 GSANADIYVEVNRLPLVGETVAASAGHSLAGGKGANQAACGGRLAMGPTYLVARVGDDAN 389 GS NAD + + P GETV + GGKGANQA GR + +A GDD+ Sbjct: 11 GSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAF-IACTGDDSI 69 Query: 390 GRLLEGALA 416 G + LA Sbjct: 70 GESVRQQLA 78
>RBSK_ECO57 (P0A9J7) Ribokinase (EC 2.7.1.15)| Length = 309 Score = 45.1 bits (105), Expect = 7e-05 Identities = 27/69 (39%), Positives = 34/69 (49%) Frame = +3 Query: 210 GSANADIYVEVNRLPLVGETVAASAGHSLAGGKGANQAACGGRLAMGPTYLVARVGDDAN 389 GS NAD + + P GETV + GGKGANQA GR + +A GDD+ Sbjct: 11 GSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAF-IACTGDDSI 69 Query: 390 GRLLEGALA 416 G + LA Sbjct: 70 GESVRQQLA 78
>RBSK_HAEIN (P44331) Ribokinase (EC 2.7.1.15)| Length = 306 Score = 43.1 bits (100), Expect = 3e-04 Identities = 25/72 (34%), Positives = 35/72 (48%) Frame = +3 Query: 210 GSANADIYVEVNRLPLVGETVAASAGHSLAGGKGANQAACGGRLAMGPTYLVARVGDDAN 389 GS NAD + V GET+ GGKGANQA RL + ++ +G D+ Sbjct: 9 GSINADHVISVPYFTKPGETLTGQNYQIAYGGKGANQAVAAARLGAKVAF-ISCIGSDSI 67 Query: 390 GRLLEGALADAG 425 G+ ++ A A G Sbjct: 68 GKTMKNAFAQEG 79
>RBSK_HUMAN (Q9H477) Ribokinase (EC 2.7.1.15)| Length = 322 Score = 38.5 bits (88), Expect = 0.007 Identities = 24/61 (39%), Positives = 30/61 (49%) Frame = +3 Query: 210 GSANADIYVEVNRLPLVGETVAASAGHSLAGGKGANQAACGGRLAMGPTYLVARVGDDAN 389 GS D+ +RLP GET+ GGKGANQ RL T +V +VG D+ Sbjct: 22 GSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLG-AMTSMVCKVGKDSF 80 Query: 390 G 392 G Sbjct: 81 G 81
>RBSK_SCHPO (O60116) Putative ribokinase (EC 2.7.1.15)| Length = 318 Score = 36.6 bits (83), Expect = 0.027 Identities = 31/80 (38%), Positives = 37/80 (46%), Gaps = 6/80 (7%) Frame = +3 Query: 210 GSANADIYVEVNRLPLVGETVAASA-GHSLA-GGKGANQAACGGRL---AMGPTYLVARV 374 GS N D+ + P GET+ G S GGKGANQA RL A ++ V Sbjct: 8 GSMNTDLVMRTKICPSGGETIHGEPDGFSTGNGGKGANQAVAVARLSNPADTKVSMLGCV 67 Query: 375 GDDANG-RLLEGALADAGGV 431 GDDA G +L G D V Sbjct: 68 GDDAFGVEMLSGLKKDGVNV 87
>EPN1_RAT (O88339) Epsin-1 (EPS-15-interacting protein 1)| Length = 575 Score = 33.9 bits (76), Expect = 0.17 Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Frame = +1 Query: 274 PRVPVTASPVGRAPIKPPAGGGWRWDPPT--SWRAWGTTPTGASSRAHSRTP 423 P VP A P G A P +G WR PT S WG TP A+ + P Sbjct: 299 PAVPPAADPWGGAAPTPASGDPWRPAAPTGPSVDPWGGTPAPAAGEGPTSDP 350
>EPN1_MOUSE (Q80VP1) Epsin-1 (EPS-15-interacting protein 1)| (Intersectin-EH-binding protein 1) (Ibp1) Length = 566 Score = 33.5 bits (75), Expect = 0.22 Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Frame = +1 Query: 274 PRVPVTASPVGRAPIKPPAGGGWRWDPPT--SWRAWGTTPTGASSRAHSRTP 423 P VP A P G A P +G WR PT S WG TP A+ + P Sbjct: 290 PAVPPAADPWGGAAPTPASGDPWRPAAPTGPSVDPWGGTPAPAAGEGPTPDP 341
>LPP_CHICK (Q5F464) Lipoma-preferred partner homolog| Length = 604 Score = 31.2 bits (69), Expect = 1.1 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 7/53 (13%) Frame = +1 Query: 4 VDTPVDS---AVFSTQPPWLSKRASASHSPGQLRP----PLSSQDPTPNPATY 141 V TPV + QPP + + S + PGQ P P+ + P P PA+Y Sbjct: 156 VSTPVTGHKRMIIPNQPPLTATKKSTAKGPGQPAPIPVTPIGTLKPQPVPASY 208
>PG03_MYCTU (P56877) Hypothetical PE-PGRS family protein PE_PGRS3 precursor| Length = 957 Score = 30.8 bits (68), Expect = 1.5 Identities = 18/50 (36%), Positives = 21/50 (42%) Frame = +3 Query: 279 SAGHSLAGGKGANQAACGGRLAMGPTYLVARVGDDANGRLLEGALADAGG 428 S GHSL G G LA+G +G D G L G + AGG Sbjct: 325 SGGHSLVAGGDGGAGGNAGMLALGAAGGAGGIGGD-GGTLTAGGIGGAGG 373
>SCRK1_ORYSA (Q944F4) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI)| Length = 323 Score = 30.8 bits (68), Expect = 1.5 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = +3 Query: 300 GGKGANQAACGGRLAMGPTYLVARVGDDANGRLLEGALADAG 425 GG AN A RL G + V ++GDD GR+L L D G Sbjct: 38 GGAPANVAIAVARLGGGAAF-VGKLGDDEFGRMLAAILRDNG 78
>SCRK1_MAIZE (Q6XZ79) Fructokinase-1 (EC 2.7.1.4) (ZmFRK1)| Length = 323 Score = 30.8 bits (68), Expect = 1.5 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = +3 Query: 300 GGKGANQAACGGRLAMGPTYLVARVGDDANGRLLEGALADAG 425 GG AN A RL G + V ++GDD GR+L L D G Sbjct: 38 GGAPANVAIAVSRLGGGAAF-VGKLGDDEFGRMLAAILRDNG 78
>PRB2_HUMAN (P02812) Basic salivary proline-rich protein 2 (Salivary| proline-rich protein) (Con1 glycoprotein) [Contains: Basic peptide P-F] (Fragment) Length = 382 Score = 30.4 bits (67), Expect = 1.9 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = +1 Query: 298 PVGRAPIKPPAGGGWRWDPPTSWRAWGTTPTGASSRAHSRTP 423 P G+ PP GG PP + G P G S SR+P Sbjct: 225 PPGKPQGPPPQGGNKSQGPPPPGKPQGPPPQGGSKSRSSRSP 266 Score = 28.9 bits (63), Expect = 5.5 Identities = 14/42 (33%), Positives = 18/42 (42%) Frame = +1 Query: 298 PVGRAPIKPPAGGGWRWDPPTSWRAWGTTPTGASSRAHSRTP 423 P G+ PP GG PP + G P G S +R+P Sbjct: 287 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSP 328 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/42 (33%), Positives = 18/42 (42%) Frame = +1 Query: 298 PVGRAPIKPPAGGGWRWDPPTSWRAWGTTPTGASSRAHSRTP 423 P G+ PP GG PP + G P G + SR+P Sbjct: 101 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSP 142
>SELD_DESVH (Q72CF1) Selenide, water dikinase (EC 2.7.9.3) (Selenophosphate| synthetase) (Selenium donor protein) Length = 351 Score = 30.0 bits (66), Expect = 2.5 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = +3 Query: 213 SANADIYVEVNRLPLVGETVAASAGHSLAGGKGANQAACGGRLAMGP 353 ++N ++V+V+ LPL+ + A L G AN+ C G +++ P Sbjct: 243 ASNMSVHVDVSTLPLMPAVLDLVATGLLPAGSHANRHFCSGNVSVHP 289
>SELD_METMP (P60820) Selenide, water dikinase (EC 2.7.9.3) (Selenophosphate| synthetase) (Selenium donor protein) Length = 335 Score = 30.0 bits (66), Expect = 2.5 Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 2/42 (4%) Frame = +3 Query: 222 ADIYVEVNRLPLVGET--VAASAGHSLAGGKGANQAACGGRL 341 +D+ +E++ LP++ T +A+ GH+L GKGA A GG L Sbjct: 249 SDVEIEISCLPVIKGTPELASLFGHALCSGKGAETA--GGLL 288
>YZLL_CAEEL (Q93847) Hypothetical WD-repeat protein K04G11.4| Length = 395 Score = 29.6 bits (65), Expect = 3.2 Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 11/95 (11%) Frame = +3 Query: 45 PMALEARLRLPLAGPTPATAFVSGSNPKPSHVSFSLKPT-----------STSLXXXXXX 191 P+ L A+ P+ TP ++ S P P+ + +L PT S+ Sbjct: 57 PVGLPAQASTPMLSSTPGPSYSSAPTPMPNPSAANLWPTYKLVAEIPNAHKKSISGIKFS 116 Query: 192 XXXXXXGSANADIYVEVNRLPLVGETVAASAGHSL 296 GS +AD +++ R+ V E GH L Sbjct: 117 PDGRYMGSGSADCSIKIWRMDFVYEKTL--MGHRL 149
>YHUH_STRGR (P24222) Hypothetical protein in hutH 5'region (Fragment)| Length = 241 Score = 28.9 bits (63), Expect = 5.5 Identities = 22/65 (33%), Positives = 30/65 (46%) Frame = +3 Query: 228 IYVEVNRLPLVGETVAASAGHSLAGGKGANQAACGGRLAMGPTYLVARVGDDANGRLLEG 407 + ++N L V +T + G L G+ + CG AM P L AR+G D L G Sbjct: 89 VVCDLNGLKAVNDTHGHAVGDRLLERFGSVLSLCG---AMLPEALAARLGGDEFCLLTAG 145 Query: 408 ALADA 422 ADA Sbjct: 146 PPADA 150
>NK3R_CAVPO (P30098) Neuromedin K receptor (NKR) (Neurokinin B receptor) (NK-3| receptor) (NK-3R) (Tachykinin receptor 3) Length = 440 Score = 28.9 bits (63), Expect = 5.5 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Frame = +1 Query: 292 ASPVGRAPIKPPAGGGWRWDPPTSWR--AWGTTPTGASSRAHSRTPA 426 ASP G P GW W PP + R PT + S A S TP+ Sbjct: 2 ASPAGNLSAWP----GWGWPPPAALRNLTSSPAPTASPSPAPSWTPS 44
>VE2_HPV1A (P03118) Regulatory protein E2| Length = 401 Score = 28.9 bits (63), Expect = 5.5 Identities = 16/49 (32%), Positives = 21/49 (42%) Frame = +1 Query: 277 RVPVTASPVGRAPIKPPAGGGWRWDPPTSWRAWGTTPTGASSRAHSRTP 423 + PV P GR + P GGG R T R G+ P+ + TP Sbjct: 252 KTPVRRRPYGRRRSRSPRGGGRREGESTPSRTPGSVPSARDVGSIHTTP 300
>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)| Length = 2442 Score = 25.0 bits (53), Expect(2) = 6.2 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = +1 Query: 4 VDTPVDSAVFSTQPPWLSKRASASHSPG-QLRPPLSSQDPTPNP 132 + +P S Q LS + ASH PG Q+ LS+Q +P P Sbjct: 2305 IGSPGQPNPMSPQQHMLSGQPQASHLPGQQIATSLSNQVRSPAP 2348 Score = 21.9 bits (45), Expect(2) = 6.2 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = +2 Query: 113 RIQPQTQPRILLPQT 157 RIQPQ P + PQT Sbjct: 2366 RIQPQPSPHHVSPQT 2380
>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)| Length = 2441 Score = 25.0 bits (53), Expect(2) = 6.2 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = +1 Query: 4 VDTPVDSAVFSTQPPWLSKRASASHSPG-QLRPPLSSQDPTPNP 132 + +P S Q LS + ASH PG Q+ LS+Q +P P Sbjct: 2304 IGSPGQPNPMSPQQHMLSGQPQASHLPGQQIATSLSNQVRSPAP 2347 Score = 21.9 bits (45), Expect(2) = 6.2 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = +2 Query: 113 RIQPQTQPRILLPQT 157 RIQPQ P + PQT Sbjct: 2365 RIQPQPSPHHVSPQT 2379
>SELD_METJA (P60819) Selenide, water dikinase (EC 2.7.9.3) (Selenophosphate| synthetase) (Selenium donor protein) Length = 349 Score = 28.5 bits (62), Expect = 7.2 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +3 Query: 219 NADIYVEVNRLPLVGETVAASA--GHSLAGGKGANQAACGGRL 341 N+++ +E+N LP + T S GH+L G GA A GG L Sbjct: 262 NSNVLIEINLLPCIKRTPELSRLFGHALLDGYGAETA--GGLL 302
>K22O_HUMAN (Q01546) Keratin, type II cytoskeletal 2 oral (Cytokeratin-2P)| (K2P) (CK 2P) Length = 638 Score = 28.5 bits (62), Expect = 7.2 Identities = 16/54 (29%), Positives = 26/54 (48%) Frame = +3 Query: 267 TVAASAGHSLAGGKGANQAACGGRLAMGPTYLVARVGDDANGRLLEGALADAGG 428 +++ +AG S AGG G +++CG G + + G GR + AGG Sbjct: 68 SISVAAGSSRAGGFGGGRSSCGFAGGYGGGFGGSYGGGFGGGRGVGSGFGGAGG 121
>RP1_HUMAN (P56715) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1| protein) (Retinitis pigmentosa 1 protein) Length = 2156 Score = 28.1 bits (61), Expect = 9.4 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 10/42 (23%) Frame = +1 Query: 13 PVDSAVFSTQP-PWLSKRASASHS---------PGQLRPPLS 108 PVD +P PWLS RA ++HS PG RPP S Sbjct: 114 PVDLDKARRRPRPWLSSRAISAHSPPHPVAVAAPGMPRPPRS 155
>PA1_SERLI (P18952) Extracellular phospholipase A1 precursor (EC 3.1.1.32)| Length = 319 Score = 28.1 bits (61), Expect = 9.4 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 5/55 (9%) Frame = +3 Query: 282 AGHSLAGGKGANQAACGGRLAMGPTYLVARVGDDANGRL-LEGAL----ADAGGV 431 AGHSL GG A A G +A+ T+ A V D RL ++ A A+AGG+ Sbjct: 191 AGHSLGGGLAATAALATGTVAV--TFNAAGVSDYTLNRLGIDPAAAKKDAEAGGI 243
>ABP1_MOUSE (Q8JZQ5) Amiloride-sensitive amine oxidase [copper-containing]| precursor (EC 1.4.3.6) (Diamine oxidase) (DAO) (Amiloride-binding protein) (ABP) (Histaminase) Length = 751 Score = 28.1 bits (61), Expect = 9.4 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = +3 Query: 84 GPTPATAFVSGSNPKPS-HVSFSLKPTSTS 170 GP P +V +P+P H+S+S +P ST+ Sbjct: 117 GPLPRPCYVQALSPRPGHHLSWSSRPISTA 146 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.128 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,254,154 Number of Sequences: 219361 Number of extensions: 851735 Number of successful extensions: 3232 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 2945 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3220 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
