ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast58f01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome... 184 1e-43
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 184 1e-43
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 184 1e-43
4ref|XM_466267.1| Oryza sativa (japonica cultivar-group), mRNA 60 5e-06
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 60 5e-06
6dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic D... 60 5e-06
7gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 44 0.31
8ref|XM_852171.1| PREDICTED: Canis familiaris similar to Dolichyl... 44 0.31
9ref|XM_843737.1| PREDICTED: Canis familiaris similar to Dolichyl... 44 0.31
10gb|AE005999.1| Caulobacter crescentus CB15 section 325 of 359 of... 44 0.31
11tpg|BK000629.1| TPA: TPA_exp: Mus musculus otopetrin 2 (Otop2) g... 44 0.31
12dbj|AB121230.1| Cryptococcus humicola ChDDO gene for D-aspartate... 44 0.31
13dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.31
14gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.31
15dbj|AB087501.1| Mus musculus js genes for Jackson shaker and hyp... 44 0.31
16gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 44 0.31
17emb|AL603828.9| Mouse DNA sequence from clone RP23-117K15 on chr... 44 0.31
18ref|XM_366139.1| Magnaporthe grisea 70-15 chromosome IV hypothet... 42 1.2
19gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.2
20gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.2
21gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete ge... 42 1.2
22gb|DQ087285.1| Burkholderia pseudomallei phage phi52237, complet... 42 1.2
23emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.2
24emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 42 1.2
25emb|BX640414.1| Bordetella pertussis strain Tohama I, complete g... 42 1.2
26emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.2
27emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.2
28emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 42 1.2
29emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 42 1.2
30gb|AY528597.1| Burkholderia pseudomallei clone 167 unknown sequence 42 1.2
31gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.2
32gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.2
33gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.2
34dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
35dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
36dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
37dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
38dbj|AK121731.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
39dbj|AK119594.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
40dbj|AK111333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
41dbj|AK064068.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
42gb|AF054585.1|AF054585 Streptomyces coelicolor indoleglycerol ph... 42 1.2
43dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.2
44dbj|D10358.1|KPNFOLA K. aerogenes folA and apaH genes 42 1.2
45ref|XM_480271.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.8
46ref|XM_467432.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.8
47ref|NM_195889.1| Oryza sativa (japonica cultivar-group) hypothet... 40 4.8
48ref|XM_473255.1| Oryza sativa (japonica cultivar-group), predic... 40 4.8
49gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, co... 40 4.8
50gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.8
51gb|AC129306.5| Mus musculus BAC clone RP24-178A16 from chromosom... 40 4.8
52ref|XM_612729.2| PREDICTED: Bos taurus similar to VPS10 domain r... 40 4.8
53ref|XM_849537.1| PREDICTED: Canis familiaris similar to Tetraspa... 40 4.8
54gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 4.8
55emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 4.8
56emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 4.8
57gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 4.8
58emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 4.8
59emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete ... 40 4.8
60dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 4.8
61gb|AE005745.1| Caulobacter crescentus CB15 section 71 of 359 of ... 40 4.8
62emb|CR610566.1| full-length cDNA clone CS0DI007YH13 of Placenta ... 40 4.8
63gb|AE011959.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 4.8
64gb|AE012487.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 4.8
65gb|AC108080.2| Homo sapiens chromosome 5 clone CTC-315N8, comple... 40 4.8
66ref|XM_940745.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 4.8
67gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 4.8
68dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
69dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
70dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
71dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
72dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
73gb|AF325723.1|AF325723 Pennisetum ciliare phosphate-induced prot... 40 4.8
74dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
75gb|BC040037.1| Homo sapiens, Similar to RIKEN cDNA 5133400G04 ge... 40 4.8
76dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
77dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
78dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 4.8
79dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.8
80dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
81gb|AE005156.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 1... 40 4.8
82dbj|AB154372.1| Ipomoea tricolor ItIVS gene for bHLH transcripti... 40 4.8
83dbj|AB154371.1| Ipomoea tricolor ItIVS gene for bHLH transcripti... 40 4.8
84dbj|AB154370.1| Ipomoea tricolor ItIVS mRNA for bHLH transcripti... 40 4.8
85dbj|AB154369.1| Ipomoea purpurea IpIVS mRNA for bHLH transcripti... 40 4.8
86dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
87gb|AC006344.2|AC006344 Homo sapiens PAC clone RP4-726N20 from 7q... 40 4.8
88dbj|AK070234.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
89dbj|AK064945.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
90gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cyt... 40 4.8
91gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 4.8
92gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 4.8
93gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.8
94emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4,... 40 4.8
95emb|CT025520.10| Mouse DNA sequence from clone RP23-393E22 on ch... 40 4.8
96dbj|AB232775.1| Ipomoea nil InbHLH2 mRNA for bHLH transcriptiona... 40 4.8 
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0004P24, complete sequence
          Length = 137721

 Score =  184 bits (93), Expect = 1e-43
 Identities = 153/173 (88%)
 Strand = Plus / Plus

                                                                         
Query: 90    cacgtcgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 149
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18281 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 18340

                                                                         
Query: 150   ccgcacggatcctaccgctcgatgcgccgcgtgtgccgcggctggcggagcgccgccgcc 209
             ||||||||  |  ||||  ||||||| |||||||||||||| ||| ||||||| || || 
Sbjct: 18341 ccgcacggggctcaccgggcgatgcggcgcgtgtgccgcgggtggaggagcgcggcggcg 18400

                                                                  
Query: 210   gccccggagttcgccctggcgcgcgccgaggccggcgccaacgaggatctggt 262
              | || | ||||||| |||||||||||||||| ||||||||||||||| ||||
Sbjct: 18401 acgcccgcgttcgccatggcgcgcgccgaggcgggcgccaacgaggatttggt 18453



 Score = 46.1 bits (23), Expect = 0.078
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 319   ccccggcgtacggcgtggccgtgtacaacgt 349
             ||||||||||||| ||||| |||||||||||
Sbjct: 18537 ccccggcgtacggggtggcggtgtacaacgt 18567
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  184 bits (93), Expect = 1e-43
 Identities = 153/173 (88%)
 Strand = Plus / Minus

                                                                           
Query: 90      cacgtcgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 149
               |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7798674 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 7798615

                                                                           
Query: 150     ccgcacggatcctaccgctcgatgcgccgcgtgtgccgcggctggcggagcgccgccgcc 209
               ||||||||  |  ||||  ||||||| |||||||||||||| ||| ||||||| || || 
Sbjct: 7798614 ccgcacggggctcaccgggcgatgcggcgcgtgtgccgcgggtggaggagcgcggcggcg 7798555

                                                                    
Query: 210     gccccggagttcgccctggcgcgcgccgaggccggcgccaacgaggatctggt 262
                | || | ||||||| |||||||||||||||| ||||||||||||||| ||||
Sbjct: 7798554 acgcccgcgttcgccatggcgcgcgccgaggcgggcgccaacgaggatttggt 7798502



 Score = 46.1 bits (23), Expect = 0.078
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 319     ccccggcgtacggcgtggccgtgtacaacgt 349
               ||||||||||||| ||||| |||||||||||
Sbjct: 7798418 ccccggcgtacggggtggcggtgtacaacgt 7798388
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  184 bits (93), Expect = 1e-43
 Identities = 153/173 (88%)
 Strand = Plus / Minus

                                                                           
Query: 90      cacgtcgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 149
               |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7868761 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 7868702

                                                                           
Query: 150     ccgcacggatcctaccgctcgatgcgccgcgtgtgccgcggctggcggagcgccgccgcc 209
               ||||||||  |  ||||  ||||||| |||||||||||||| ||| ||||||| || || 
Sbjct: 7868701 ccgcacggggctcaccgggcgatgcggcgcgtgtgccgcgggtggaggagcgcggcggcg 7868642

                                                                    
Query: 210     gccccggagttcgccctggcgcgcgccgaggccggcgccaacgaggatctggt 262
                | || | ||||||| |||||||||||||||| ||||||||||||||| ||||
Sbjct: 7868641 acgcccgcgttcgccatggcgcgcgccgaggcgggcgccaacgaggatttggt 7868589



 Score = 46.1 bits (23), Expect = 0.078
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 319     ccccggcgtacggcgtggccgtgtacaacgt 349
               ||||||||||||| ||||| |||||||||||
Sbjct: 7868505 ccccggcgtacggggtggcggtgtacaacgt 7868475
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>ref|XM_466267.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1200

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                       
Query: 99  ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtcccgcacgga 158
           |||||||||||| |||| |||||||| ||| | || |||||||||||||| |||  | | 
Sbjct: 70  ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgtgccgagccgg 129

                                                 
Query: 159 tcctaccgctcgatgcgccgcgtgtgccgcggctggcg 196
           ||  ||||  || ||||||||||||||||||| |||||
Sbjct: 130 tcgcaccgggcggtgcgccgcgtgtgccgcgggtggcg 167
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                            
Query: 99       ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtcccgcacgga 158
                |||||||||||| |||| |||||||| ||| | || |||||||||||||| |||  | | 
Sbjct: 21385077 ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgtgccgagccgg 21385136

                                                      
Query: 159      tcctaccgctcgatgcgccgcgtgtgccgcggctggcg 196
                ||  ||||  || ||||||||||||||||||| |||||
Sbjct: 21385137 tcgcaccgggcggtgcgccgcgtgtgccgcgggtggcg 21385174



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 226      tggcgcgcgccgaggccggc 245
                ||||||||||||||||||||
Sbjct: 29483459 tggcgcgcgccgaggccggc 29483440
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>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1712_E04
          Length = 110098

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                         
Query: 99    ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtcccgcacgga 158
             |||||||||||| |||| |||||||| ||| | || |||||||||||||| |||  | | 
Sbjct: 45030 ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgtgccgagccgg 45089

                                                   
Query: 159   tcctaccgctcgatgcgccgcgtgtgccgcggctggcg 196
             ||  ||||  || ||||||||||||||||||| |||||
Sbjct: 45090 tcgcaccgggcggtgcgccgcgtgtgccgcgggtggcg 45127
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 233     cgccgaggccggcgccaacgaggatc 258
               |||||||| |||||||||||||||||
Sbjct: 4281763 cgccgaggacggcgccaacgaggatc 4281788
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>ref|XM_852171.1| PREDICTED: Canis familiaris similar to
           Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase 67 kDa subunit precursor (Ribophorin
           I) (RPN-I), transcript variant 4 (LOC476516), mRNA
          Length = 1957

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 194 gcggagcgccgccgccgccccg 215
           ||||||||||||||||||||||
Sbjct: 52  gcggagcgccgccgccgccccg 31
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>ref|XM_843737.1| PREDICTED: Canis familiaris similar to
           Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase 67 kDa subunit precursor (Ribophorin
           I) (RPN-I), transcript variant 3 (LOC476516), mRNA
          Length = 2110

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 194 gcggagcgccgccgccgccccg 215
           ||||||||||||||||||||||
Sbjct: 52  gcggagcgccgccgccgccccg 31
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>gb|AE005999.1| Caulobacter crescentus CB15 section 325 of 359 of the complete genome
          Length = 12079

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 278  cggcaacccggtggccggcgacgacgcggc 307
            |||| |||| ||||||||||||||||||||
Sbjct: 3354 cggcgaccccgtggccggcgacgacgcggc 3325
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>tpg|BK000629.1| TPA: TPA_exp: Mus musculus otopetrin 2 (Otop2) gene, complete cds
          Length = 53301

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 21    cagcaaagctcacacaagtcacaagc 46
             |||| |||||||||||||||||||||
Sbjct: 25446 cagccaagctcacacaagtcacaagc 25471
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>dbj|AB121230.1| Cryptococcus humicola ChDDO gene for D-aspartate oxidase, exon 1-3,
            complete cds
          Length = 1783

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 226  tggcgcgcgccgaggccggcgc 247
            ||||||||||||||||||||||
Sbjct: 1120 tggcgcgcgccgaggccggcgc 1099
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 276     ttcggcaacccggtggccggcg 297
               ||||||||||||||||||||||
Sbjct: 1606464 ttcggcaacccggtggccggcg 1606443



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 202     ccgccgccgccccggagttc 221
               ||||||||||||||||||||
Sbjct: 4061183 ccgccgccgccccggagttc 4061164
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 284     cccggtggccggcgacgacgcg 305
               ||||||||||||||||||||||
Sbjct: 2281355 cccggtggccggcgacgacgcg 2281376



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 221     cgccctggcgcgcgccgagg 240
               ||||||||||||||||||||
Sbjct: 3071963 cgccctggcgcgcgccgagg 3071982



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 277    tcggcaacccggtggccggcgacg 300
              ||||| ||||||||||||||||||
Sbjct: 310706 tcggccacccggtggccggcgacg 310729
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>dbj|AB087501.1| Mus musculus js genes for Jackson shaker and hypothetical protein,
             complete and partial cds
          Length = 72195

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 21    cagcaaagctcacacaagtcacaagc 46
             |||| |||||||||||||||||||||
Sbjct: 54762 cagccaagctcacacaagtcacaagc 54787
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 231     cgcgccgaggccggcgccaacgagga 256
               |||||||||||||||||| |||||||
Sbjct: 2631514 cgcgccgaggccggcgccgacgagga 2631489
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>emb|AL603828.9| Mouse DNA sequence from clone RP23-117K15 on chromosome 11, complete
              sequence
          Length = 210982

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 21     cagcaaagctcacacaagtcacaagc 46
              |||| |||||||||||||||||||||
Sbjct: 132668 cagccaagctcacacaagtcacaagc 132693
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>ref|XM_366139.1| Magnaporthe grisea 70-15 chromosome IV hypothetical protein
            (MG10359.4) partial mRNA
          Length = 1248

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 225  ctggcgcgcgccgaggccggc 245
            |||||||||||||||||||||
Sbjct: 1036 ctggcgcgcgccgaggccggc 1056
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 227     ggcgcgcgccgaggccggcgc 247
               |||||||||||||||||||||
Sbjct: 3181412 ggcgcgcgccgaggccggcgc 3181432
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 163      accgctcgatgcgccgcgtgt 183
                |||||||||||||||||||||
Sbjct: 10557369 accgctcgatgcgccgcgtgt 10557349
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>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome
          Length = 138390

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 224   cctggcgcgcgccgaggccgg 244
             |||||||||||||||||||||
Sbjct: 82002 cctggcgcgcgccgaggccgg 81982
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>gb|DQ087285.1| Burkholderia pseudomallei phage phi52237, complete genome
          Length = 37639

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 224  cctggcgcgcgccgaggccggcgcc 248
            ||||||||||||||||| |||||||
Sbjct: 6106 cctggcgcgcgccgaggtcggcgcc 6130
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>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 289   tggccggcgacgacgcggcgc 309
             |||||||||||||||||||||
Sbjct: 55398 tggccggcgacgacgcggcgc 55418
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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 289    tggccggcgacgacgcggcgc 309
              |||||||||||||||||||||
Sbjct: 312081 tggccggcgacgacgcggcgc 312101
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>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 289    tggccggcgacgacgcggcgc 309
              |||||||||||||||||||||
Sbjct: 190070 tggccggcgacgacgcggcgc 190050
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 227     ggcgcgcgccgaggccggcgc 247
               |||||||||||||||||||||
Sbjct: 1358844 ggcgcgcgccgaggccggcgc 1358864
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 224    cctggcgcgcgccgaggccggcgcc 248
              ||||||||||||||||| |||||||
Sbjct: 148671 cctggcgcgcgccgaggtcggcgcc 148695
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>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 284    cccggtggccggcgacgacgcggcg 308
              |||||||||||||||||||| ||||
Sbjct: 270247 cccggtggccggcgacgacgaggcg 270271
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>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 230   gcgcgccgaggccggcgccaa 250
             |||||||||||||||||||||
Sbjct: 89136 gcgcgccgaggccggcgccaa 89116
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>gb|AY528597.1| Burkholderia pseudomallei clone 167 unknown sequence
          Length = 246

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 224 cctggcgcgcgccgaggccggcgcc 248
           ||||||||||||||||| |||||||
Sbjct: 109 cctggcgcgcgccgaggtcggcgcc 85
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>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0036G02, from chromosome 3, complete sequence
          Length = 153308

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 163    accgctcgatgcgccgcgtgt 183
              |||||||||||||||||||||
Sbjct: 113182 accgctcgatgcgccgcgtgt 113162
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 229     cgcgcgccgaggccggcgcca 249
               |||||||||||||||||||||
Sbjct: 1413119 cgcgcgccgaggccggcgcca 1413099



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 290     ggccggcgacgacgcggcgc 309
               ||||||||||||||||||||
Sbjct: 2131561 ggccggcgacgacgcggcgc 2131580
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 227     ggcgcgcgccgaggccggcgc 247
               |||||||||||||||||||||
Sbjct: 1274325 ggcgcgcgccgaggccggcgc 1274305
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 200      cgccgccgccgccccggagttcgcc 224
                |||||||||||| ||||||||||||
Sbjct: 27926370 cgccgccgccgcgccggagttcgcc 27926394
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 163      accgctcgatgcgccgcgtgt 183
                |||||||||||||||||||||
Sbjct: 10555470 accgctcgatgcgccgcgtgt 10555450
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>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E03
          Length = 159980

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 200   cgccgccgccgccccggagttcgcc 224
             |||||||||||| ||||||||||||
Sbjct: 89728 cgccgccgccgcgccggagttcgcc 89752
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>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_D04
          Length = 143407

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 200   cgccgccgccgccccggagttcgcc 224
             |||||||||||| ||||||||||||
Sbjct: 15704 cgccgccgccgcgccggagttcgcc 15728
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>dbj|AK121731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082H10, full
            insert sequence
          Length = 1850

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 163  accgctcgatgcgccgcgtgt 183
            |||||||||||||||||||||
Sbjct: 1226 accgctcgatgcgccgcgtgt 1206
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>dbj|AK119594.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D07, full
            insert sequence
          Length = 2009

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 163  accgctcgatgcgccgcgtgt 183
            |||||||||||||||||||||
Sbjct: 1397 accgctcgatgcgccgcgtgt 1377
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>dbj|AK111333.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-E06, full
           insert sequence
          Length = 811

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 200 cgccgccgccgccccggagttcgcc 224
           |||||||||||| ||||||||||||
Sbjct: 55  cgccgccgccgcgccggagttcgcc 79
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>dbj|AK064068.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-G08, full
           insert sequence
          Length = 875

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 163 accgctcgatgcgccgcgtgt 183
           |||||||||||||||||||||
Sbjct: 248 accgctcgatgcgccgcgtgt 228
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>gb|AF054585.1|AF054585 Streptomyces coelicolor indoleglycerol phosphate synthase (trpC),
           tryptophan synthase beta subunit (trpB), and tryptophan
           synthase alpha subunit (trpA) genes, complete cds; and
           unknown gene
          Length = 5093

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 230 gcgcgccgaggccggcgccaa 250
           |||||||||||||||||||||
Sbjct: 442 gcgcgccgaggccggcgccaa 462
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 213   ccggagttcgccctggcgcgc 233
             |||||||||||||||||||||
Sbjct: 93998 ccggagttcgccctggcgcgc 93978
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>dbj|D10358.1|KPNFOLA K. aerogenes folA and apaH genes
          Length = 1654

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 306  gcgcccgaggacgccccggcg 326
            |||||||||||||||||||||
Sbjct: 1129 gcgcccgaggacgccccggcg 1109
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>ref|XM_480271.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 684

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 193 ggcggagcgccgccgccgcc 212
           ||||||||||||||||||||
Sbjct: 356 ggcggagcgccgccgccgcc 337
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>ref|XM_467432.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1815

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 tggcgcgcgccgaggccggc 245
           ||||||||||||||||||||
Sbjct: 696 tggcgcgcgccgaggccggc 715
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>ref|NM_195889.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0052C09.12), mRNA
          Length = 942

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 233 cgccgaggccggcgccaacg 252
           ||||||||||||||||||||
Sbjct: 510 cgccgaggccggcgccaacg 529
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>ref|XM_473255.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2079

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 197 gagcgccgccgccgccccgg 216
           ||||||||||||||||||||
Sbjct: 120 gagcgccgccgccgccccgg 101
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>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence
          Length = 268984

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 189    ggctggcggagcgccgccgccgcc 212
              ||||||||||||| ||||||||||
Sbjct: 105617 ggctggcggagcgacgccgccgcc 105640
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>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0052C09, complete sequence
          Length = 139468

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   cgccgaggccggcgccaacg 252
             ||||||||||||||||||||
Sbjct: 97540 cgccgaggccggcgccaacg 97559
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>gb|AC129306.5| Mus musculus BAC clone RP24-178A16 from chromosome 16, complete sequence
          Length = 167601

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    ctggtcttcctcatgcagtt 277
              ||||||||||||||||||||
Sbjct: 131615 ctggtcttcctcatgcagtt 131634
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>ref|XM_612729.2| PREDICTED: Bos taurus similar to VPS10 domain receptor protein
           SORCS 3 (LOC533349), mRNA
          Length = 1661

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 248 caacgaggatctggtcttcc 267
           ||||||||||||||||||||
Sbjct: 679 caacgaggatctggtcttcc 660
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>ref|XM_849537.1| PREDICTED: Canis familiaris similar to Tetraspanin-9 (Tspan-9)
           (Tetraspan NET-5) (LOC612996), mRNA
          Length = 993

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 231 cgcgccgaggccggcgccaa 250
           ||||||||||||||||||||
Sbjct: 160 cgcgccgaggccggcgccaa 179
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 231     cgcgccgaggccggcgccaa 250
               ||||||||||||||||||||
Sbjct: 1848628 cgcgccgaggccggcgccaa 1848647
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 285     ccggtggccggcgacgacgc 304
               ||||||||||||||||||||
Sbjct: 3752895 ccggtggccggcgacgacgc 3752876
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 332     cgtggccgtgtacaacgtca 351
               ||||||||||||||||||||
Sbjct: 1500754 cgtggccgtgtacaacgtca 1500773
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 290     ggccggcgacgacgcggcgc 309
               ||||||||||||||||||||
Sbjct: 4476942 ggccggcgacgacgcggcgc 4476961
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 290     ggccggcgacgacgcggcgc 309
               ||||||||||||||||||||
Sbjct: 1209154 ggccggcgacgacgcggcgc 1209173
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>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    ggcgcgcgccgaggccggcg 246
              ||||||||||||||||||||
Sbjct: 248502 ggcgcgcgccgaggccggcg 248483
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 283     acccggtggccggcgacgac 302
               ||||||||||||||||||||
Sbjct: 3307324 acccggtggccggcgacgac 3307305



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 285     ccggtggccggcgacgacgc 304
               ||||||||||||||||||||
Sbjct: 1696168 ccggtggccggcgacgacgc 1696187
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>gb|AE005745.1| Caulobacter crescentus CB15 section 71 of 359 of the complete genome
          Length = 12357

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 233  cgccgaggccggcgccaacg 252
            ||||||||||||||||||||
Sbjct: 3296 cgccgaggccggcgccaacg 3277
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>emb|CR610566.1| full-length cDNA clone CS0DI007YH13 of Placenta Cot 25-normalized
          of Homo sapiens (human)
          Length = 3066

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 6  tggatccagaagcagcagca 25
          ||||||||||||||||||||
Sbjct: 83 tggatccagaagcagcagca 64
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>gb|AE011959.1| Xanthomonas axonopodis pv. citri str. 306,  section 337 of 469 of the
            complete genome
          Length = 11092

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 285  ccggtggccggcgacgacgc 304
            ||||||||||||||||||||
Sbjct: 7727 ccggtggccggcgacgacgc 7708
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>gb|AE012487.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 395
            of 460 of the complete genome
          Length = 10967

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  cgccgccccggagttcgccc 225
            ||||||||||||||||||||
Sbjct: 7719 cgccgccccggagttcgccc 7700
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>gb|AC108080.2| Homo sapiens chromosome 5 clone CTC-315N8, complete sequence
          Length = 160494

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 7      ggatccagaagcagcagcaaagct 30
              ||||||||||||||||| ||||||
Sbjct: 119446 ggatccagaagcagcaggaaagct 119423
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>ref|XM_940745.1| PREDICTED: Homo sapiens hypothetical protein LOC202051, transcript
           variant 3 (LOC202051), mRNA
          Length = 649

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 7   ggatccagaagcagcagcaaagct 30
           ||||||||||||||||| ||||||
Sbjct: 513 ggatccagaagcagcaggaaagct 536
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 206     cgccgccccggagttcgccc 225
               ||||||||||||||||||||
Sbjct: 4425323 cgccgccccggagttcgccc 4425304
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 197      gagcgccgccgccgccccgg 216
                ||||||||||||||||||||
Sbjct: 26369656 gagcgccgccgccgccccgg 26369637
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 233     cgccgaggccggcgccaacg 252
               ||||||||||||||||||||
Sbjct: 9745015 cgccgaggccggcgccaacg 9745034
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 293      cggcgacgacgcggcgcccg 312
                ||||||||||||||||||||
Sbjct: 13705204 cggcgacgacgcggcgcccg 13705185
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 193     ggcggagcgccgccgccgcc 212
               ||||||||||||||||||||
Sbjct: 4005382 ggcggagcgccgccgccgcc 4005363
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 285     ccggtggccggcgacgacgcggcg 308
               |||||||||||||||| |||||||
Sbjct: 7261928 ccggtggccggcgacgccgcggcg 7261951
to top
>gb|AF325723.1|AF325723 Pennisetum ciliare phosphate-induced protein 1-like protein mRNA,
           complete cds
          Length = 1160

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 ccgacgacgtcgccgtcgac 134
           ||||||||||||||||||||
Sbjct: 545 ccgacgacgtcgccgtcgac 564
to top
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431F01
          Length = 143209

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 285   ccggtggccggcgacgacgcggcg 308
             |||||||||||||||| |||||||
Sbjct: 63358 ccggtggccggcgacgccgcggcg 63381
to top
>gb|BC040037.1| Homo sapiens, Similar to RIKEN cDNA 5133400G04 gene, clone
           IMAGE:6155722, mRNA
          Length = 699

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 7   ggatccagaagcagcagcaaagct 30
           ||||||||||||||||| ||||||
Sbjct: 516 ggatccagaagcagcaggaaagct 539
to top
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1038_A06
          Length = 147836

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   tggcgcgcgccgaggccggc 245
             ||||||||||||||||||||
Sbjct: 78489 tggcgcgcgccgaggccggc 78470
to top
>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1311_H06
          Length = 139868

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 226    tggcgcgcgccgaggccggc 245
              ||||||||||||||||||||
Sbjct: 134331 tggcgcgcgccgaggccggc 134312
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 109     ggatgcccgacgacgtcgcc 128
               ||||||||||||||||||||
Sbjct: 2867414 ggatgcccgacgacgtcgcc 2867395
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 287     ggtggccggcgacgacgcgg 306
               ||||||||||||||||||||
Sbjct: 4812961 ggtggccggcgacgacgcgg 4812980
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>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1040D06
          Length = 155034

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 293    cggcgacgacgcggcgcccg 312
              ||||||||||||||||||||
Sbjct: 103318 cggcgacgacgcggcgcccg 103299
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>gb|AE005156.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 17 of 32 of the
            complete genome
          Length = 10091

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 188  cggctggcggagcgccgccg 207
            ||||||||||||||||||||
Sbjct: 4952 cggctggcggagcgccgccg 4933
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>dbj|AB154372.1| Ipomoea tricolor ItIVS gene for bHLH transcription activator Ivory
             seed, ivory seed-variegation (ivs-v) mutant alele
          Length = 13370

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   ctggcggagcgccgccgccg 210
             ||||||||||||||||||||
Sbjct: 10337 ctggcggagcgccgccgccg 10356
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>dbj|AB154371.1| Ipomoea tricolor ItIVS gene for bHLH transcription activator Ivory
            seed, complete cds
          Length = 10104

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 191  ctggcggagcgccgccgccg 210
            ||||||||||||||||||||
Sbjct: 7072 ctggcggagcgccgccgccg 7091
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>dbj|AB154370.1| Ipomoea tricolor ItIVS mRNA for bHLH transcription activator Ivory
            seed, complete cds
          Length = 2387

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 191  ctggcggagcgccgccgccg 210
            ||||||||||||||||||||
Sbjct: 1609 ctggcggagcgccgccgccg 1628
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>dbj|AB154369.1| Ipomoea purpurea IpIVS mRNA for bHLH transcription activator Ivory
            seed, complete cds
          Length = 2314

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 191  ctggcggagcgccgccgccg 210
            ||||||||||||||||||||
Sbjct: 1567 ctggcggagcgccgccgccg 1586
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>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0462E11
          Length = 166115

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   ggcggagcgccgccgccgcc 212
             ||||||||||||||||||||
Sbjct: 92679 ggcggagcgccgccgccgcc 92660
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>gb|AC006344.2|AC006344 Homo sapiens PAC clone RP4-726N20 from 7q32-q34, complete sequence
          Length = 127447

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     tggatccagaagcagcagca 25
             ||||||||||||||||||||
Sbjct: 10131 tggatccagaagcagcagca 10112
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>dbj|AK070234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044K18, full
           insert sequence
          Length = 1816

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 tggcgcgcgccgaggccggc 245
           ||||||||||||||||||||
Sbjct: 697 tggcgcgcgccgaggccggc 716
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>dbj|AK064945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P15, full
           insert sequence
          Length = 2455

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 197 gagcgccgccgccgccccgg 216
           ||||||||||||||||||||
Sbjct: 304 gagcgccgccgccgccccgg 285
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>gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cytochrome P450 hydroxylase ORF4,
             cytochrome P450 hydroxylase ORF3, MitT (mitT), MitS
             (mitS), MitR (mitR), MitQ (mitQ), MitP (mitP), MitO
             (mitO), MitN (mitN), MitM (mitM), MitL (mitL), MitK
             (mitK), MitJ (mitJ), MitI (mitI), MitH (mitH), MitG
             (mitG), MitF (mitF), MitE (mitE), MitD (mitD), MitC
             (mitC), MitB (mitB), MitA (mitA), MmcA (mmcA), MmcB
             (mmcB), MmcC (mmcC), MmcD (mmcD), MmcE (mmcE), MmcF
             (mmcF), MmcG (mmcG), MmcH (mmcH), MmcI (mmcI), MmcJ
             (mmcJ), MmcK (mmcK), MmcL (mmcL), MmcM (mmcM), MmcN
             (mmcN), MmcO (mmcO), Mrd (mrd), MmcP (mmcP), MmcQ (mmcQ),
             MmcR (mmcR), MmcS (mmcS), MmcT (mmcT), MmcU (mmcU), MmcV
             (mmcV), Mct (mct), MmcW (mmcW), MmcX (mmcX), and MmcY
             (mmcY) genes, complete cds; and unknown genes
          Length = 63734

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   gacgcggcgcccgaggacgc 319
             ||||||||||||||||||||
Sbjct: 17233 gacgcggcgcccgaggacgc 17214
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 283     acccggtggccggcgacgac 302
               ||||||||||||||||||||
Sbjct: 3303472 acccggtggccggcgacgac 3303453



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 285     ccggtggccggcgacgacgc 304
               ||||||||||||||||||||
Sbjct: 1719728 ccggtggccggcgacgacgc 1719747
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 224     cctggcgcgcgccgaggccg 243
               ||||||||||||||||||||
Sbjct: 1952428 cctggcgcgcgccgaggccg 1952409
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 233     cgccgaggccggcgccaacg 252
               ||||||||||||||||||||
Sbjct: 9751054 cgccgaggccggcgccaacg 9751073
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>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08,
             complete sequence
          Length = 171551

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   gagcgccgccgccgccccgg 216
             ||||||||||||||||||||
Sbjct: 10289 gagcgccgccgccgccccgg 10270
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>emb|CT025520.10| Mouse DNA sequence from clone RP23-393E22 on chromosome 16, complete
              sequence
          Length = 220149

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    ctggtcttcctcatgcagtt 277
              ||||||||||||||||||||
Sbjct: 106484 ctggtcttcctcatgcagtt 106503
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>dbj|AB232775.1| Ipomoea nil InbHLH2 mRNA for bHLH transcriptional factor, complete
            cds, strain:TKS
          Length = 2309

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 191  ctggcggagcgccgccgccg 210
            ||||||||||||||||||||
Sbjct: 1590 ctggcggagcgccgccgccg 1609


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,250,540
Number of Sequences: 3902068
Number of extensions: 3250540
Number of successful extensions: 108582
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102229
Number of HSP's gapped (non-prelim): 6347
length of query: 362
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 340
effective length of database: 17,147,199,772
effective search space: 5830047922480
effective search space used: 5830047922480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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