| Clone Name | bast58e05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_477664.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1740 Score = 198 bits (100), Expect = 1e-47 Identities = 154/172 (89%) Strand = Plus / Plus Query: 277 gtgggggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcga 336 |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 288 gtgggggatggagatcggctggcccaccgacgtccggcacgtcgctcacgtcaccttcga 347 Query: 337 ccgcctccagggcttcctcggcctccccgtcgagttcgagctccagatcccctgcccggc 396 ||||||| | ||||||||||||||||||| ||||||||||||| ||||||| ||| | Sbjct: 348 ccgcctcaacggcttcctcggcctccccgccgagttcgagctcgagatcccgggccacgt 407 Query: 397 ccccagtgccagcgccagcgtcttcggcgtgtcgccggagtcgatgcagtgc 448 |||||| ||||| || ||||| ||||||||||| || ||||||||||||||| Sbjct: 408 ccccagcgccagtgcgagcgttttcggcgtgtcacctgagtcgatgcagtgc 459 Score = 99.6 bits (50), Expect = 8e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 169 gcagcaggggcaggtgctggagctgctgctcgccgcgctgcgcaagtcggtggcgctgcc 228 |||||||||||||||||| | ||||| ||||||||||| |||| |||||||| ||| || Sbjct: 189 gcagcaggggcaggtgctcgccctgctactcgccgcgctacgcaggtcggtggtgctccc 248 Query: 229 gtgccagatggcggacgccgacgacccggc 258 |||||||||||| ||||| ||||||||||| Sbjct: 249 gtgccagatggccgacgctgacgacccggc 278
>dbj|AK103596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133E02, full insert sequence Length = 1740 Score = 198 bits (100), Expect = 1e-47 Identities = 154/172 (89%) Strand = Plus / Plus Query: 277 gtgggggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcga 336 |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 288 gtgggggatggagatcggctggcccaccgacgtccggcacgtcgctcacgtcaccttcga 347 Query: 337 ccgcctccagggcttcctcggcctccccgtcgagttcgagctccagatcccctgcccggc 396 ||||||| | ||||||||||||||||||| ||||||||||||| ||||||| ||| | Sbjct: 348 ccgcctcaacggcttcctcggcctccccgccgagttcgagctcgagatcccgggccacgt 407 Query: 397 ccccagtgccagcgccagcgtcttcggcgtgtcgccggagtcgatgcagtgc 448 |||||| ||||| || ||||| ||||||||||| || ||||||||||||||| Sbjct: 408 ccccagcgccagtgcgagcgttttcggcgtgtcacctgagtcgatgcagtgc 459 Score = 99.6 bits (50), Expect = 8e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 169 gcagcaggggcaggtgctggagctgctgctcgccgcgctgcgcaagtcggtggcgctgcc 228 |||||||||||||||||| | ||||| ||||||||||| |||| |||||||| ||| || Sbjct: 189 gcagcaggggcaggtgctcgccctgctactcgccgcgctacgcaggtcggtggtgctccc 248 Query: 229 gtgccagatggcggacgccgacgacccggc 258 |||||||||||| ||||| ||||||||||| Sbjct: 249 gtgccagatggccgacgctgacgacccggc 278
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 165 bits (83), Expect = 2e-37 Identities = 104/111 (93%) Strand = Plus / Minus Query: 277 gtgggggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcga 336 |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 12654154 gtgggggatggagatcggctggcccaccgacgtccggcacgtcgctcacgtcaccttcga 12654095 Query: 337 ccgcctccagggcttcctcggcctccccgtcgagttcgagctccagatccc 387 ||||||| | ||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 12654094 ccgcctcaacggcttcctcggcctccccgccgagttcgagctcgagatccc 12654044 Score = 99.6 bits (50), Expect = 8e-18 Identities = 80/90 (88%) Strand = Plus / Minus Query: 169 gcagcaggggcaggtgctggagctgctgctcgccgcgctgcgcaagtcggtggcgctgcc 228 |||||||||||||||||| | ||||| ||||||||||| |||| |||||||| ||| || Sbjct: 12654253 gcagcaggggcaggtgctcgccctgctactcgccgcgctacgcaggtcggtggtgctccc 12654194 Query: 229 gtgccagatggcggacgccgacgacccggc 258 |||||||||||| ||||| ||||||||||| Sbjct: 12654193 gtgccagatggccgacgctgacgacccggc 12654164 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 413 agcgtcttcggcgtgtcgccggagtcgatgcagtgc 448 ||||| ||||||||||| || ||||||||||||||| Sbjct: 12653887 agcgttttcggcgtgtcacctgagtcgatgcagtgc 12653852
>dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0492E07 Length = 143794 Score = 165 bits (83), Expect = 2e-37 Identities = 104/111 (93%) Strand = Plus / Minus Query: 277 gtgggggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcga 336 |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 28624 gtgggggatggagatcggctggcccaccgacgtccggcacgtcgctcacgtcaccttcga 28565 Query: 337 ccgcctccagggcttcctcggcctccccgtcgagttcgagctccagatccc 387 ||||||| | ||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 28564 ccgcctcaacggcttcctcggcctccccgccgagttcgagctcgagatccc 28514 Score = 99.6 bits (50), Expect = 8e-18 Identities = 80/90 (88%) Strand = Plus / Minus Query: 169 gcagcaggggcaggtgctggagctgctgctcgccgcgctgcgcaagtcggtggcgctgcc 228 |||||||||||||||||| | ||||| ||||||||||| |||| |||||||| ||| || Sbjct: 28723 gcagcaggggcaggtgctcgccctgctactcgccgcgctacgcaggtcggtggtgctccc 28664 Query: 229 gtgccagatggcggacgccgacgacccggc 258 |||||||||||| ||||| ||||||||||| Sbjct: 28663 gtgccagatggccgacgctgacgacccggc 28634 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 413 agcgtcttcggcgtgtcgccggagtcgatgcagtgc 448 ||||| ||||||||||| || ||||||||||||||| Sbjct: 28357 agcgttttcggcgtgtcacctgagtcgatgcagtgc 28322
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 123 bits (62), Expect = 5e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 283 gatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccgcct 342 |||||| ||||| ||||| || ||||| |||||||| ||||||||||||||||||||| | Sbjct: 21243076 gatggagatcgggtggccgacggacgtgcgccacgtggcgcacgtcaccttcgaccgctt 21243135 Query: 343 ccagggcttcctcggcctccccgtcgagttcgag 376 ||| |||||||||||||||||||||||||||||| Sbjct: 21243136 ccatggcttcctcggcctccccgtcgagttcgag 21243169 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 281 gggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccgc 340 |||||||| || || ||||| || ||||| | ||||| ||||||||||||||||| | Sbjct: 2711715 gggatggagatagggtggccgacggacgtgcagcacgtggcgcacgtcaccttcgatagg 2711656 Query: 341 ctccagggcttcctcggcctccccgtcgagttcgagc 377 |||| || |||||||| |||||||| |||||||||| Sbjct: 2711655 ttccatggattcctcgggctccccgtggagttcgagc 2711619
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 123 bits (62), Expect = 5e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 283 gatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccgcct 342 |||||| ||||| ||||| || ||||| |||||||| ||||||||||||||||||||| | Sbjct: 21169285 gatggagatcgggtggccgacggacgtgcgccacgtggcgcacgtcaccttcgaccgctt 21169344 Query: 343 ccagggcttcctcggcctccccgtcgagttcgag 376 ||| |||||||||||||||||||||||||||||| Sbjct: 21169345 ccatggcttcctcggcctccccgtcgagttcgag 21169378 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 281 gggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccgc 340 |||||||| || || ||||| || ||||| | ||||| ||||||||||||||||| | Sbjct: 2711659 gggatggagatagggtggccgacggacgtgcagcacgtggcgcacgtcaccttcgatagg 2711600 Query: 341 ctccagggcttcctcggcctccccgtcgagttcgagc 377 |||| || |||||||| |||||||| |||||||||| Sbjct: 2711599 ttccatggattcctcgggctccccgtggagttcgagc 2711563
>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137571 Score = 123 bits (62), Expect = 5e-25 Identities = 86/94 (91%) Strand = Plus / Minus Query: 283 gatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccgcct 342 |||||| ||||| ||||| || ||||| |||||||| ||||||||||||||||||||| | Sbjct: 47124 gatggagatcgggtggccgacggacgtgcgccacgtggcgcacgtcaccttcgaccgctt 47065 Query: 343 ccagggcttcctcggcctccccgtcgagttcgag 376 ||| |||||||||||||||||||||||||||||| Sbjct: 47064 ccatggcttcctcggcctccccgtcgagttcgag 47031
>gb|AY364310.1| Oryza sativa (japonica cultivar-group) Rho GTPase activating protein 1 mRNA, partial cds Length = 1350 Score = 121 bits (61), Expect = 2e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 284 atggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccgcctc 343 ||||| ||||| ||||| || ||||| |||||||| ||||||||||||||||||||| || Sbjct: 1 atggagatcgggtggccgacggacgtgcgccacgtggcgcacgtcaccttcgaccgcttc 60 Query: 344 cagggcttcctcggcctccccgtcgagttcgag 376 || |||||||||||||||||||||||||||||| Sbjct: 61 catggcttcctcggcctccccgtcgagttcgag 93
>ref|NM_189413.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 777 Score = 115 bits (58), Expect = 1e-22 Identities = 139/166 (83%) Strand = Plus / Plus Query: 283 gatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccgcct 342 |||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 72 gatggagatcggttggcccaccgacgtccgccacgtcgcccacgtcaccttcgaccggtt 131 Query: 343 ccagggcttcctcggcctccccgtcgagttcgagctccagatcccctgcccggcccccag 402 ||| ||||||| ||||||||||||||| || ||| | || || || || |||||||| Sbjct: 132 ccatggcttccagggcctccccgtcgagctccagcccgaggtcgccggcaacgcccccag 191 Query: 403 tgccagcgccagcgtcttcggcgtgtcgccggagtcgatgcagtgc 448 || ||| | || |||||||||||| ||||||||||||||||| Sbjct: 192 cgcaagcaagacggtgttcggcgtgtcgacggagtcgatgcagtgc 237
>dbj|AK108137.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-E04, full insert sequence Length = 1136 Score = 115 bits (58), Expect = 1e-22 Identities = 139/166 (83%) Strand = Plus / Plus Query: 283 gatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccgcct 342 |||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 223 gatggagatcggttggcccaccgacgtccgccacgtcgcccacgtcaccttcgaccggtt 282 Query: 343 ccagggcttcctcggcctccccgtcgagttcgagctccagatcccctgcccggcccccag 402 ||| ||||||| ||||||||||||||| || ||| | || || || || |||||||| Sbjct: 283 ccatggcttccagggcctccccgtcgagctccagcccgaggtcgccggcaacgcccccag 342 Query: 403 tgccagcgccagcgtcttcggcgtgtcgccggagtcgatgcagtgc 448 || ||| | || |||||||||||| ||||||||||||||||| Sbjct: 343 cgcaagcaagacggtgttcggcgtgtcgacggagtcgatgcagtgc 388
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 111 bits (56), Expect = 2e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 283 gatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccgcct 342 |||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 42647077 gatggagatcggttggcccaccgacgtccgccacgtcgcccacgtcaccttcgaccggtt 42647136 Query: 343 ccagggcttcctcggcctccccgtcgag 370 ||| ||||||| ||||||||||||||| Sbjct: 42647137 ccatggcttccagggcctccccgtcgag 42647164 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 419 ttcggcgtgtcgccggagtcgatgcagtgc 448 |||||||||||| ||||||||||||||||| Sbjct: 42647297 ttcggcgtgtcgacggagtcgatgcagtgc 42647326
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 111 bits (56), Expect = 2e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 283 gatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccgcct 342 |||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 167960 gatggagatcggttggcccaccgacgtccgccacgtcgcccacgtcaccttcgaccggtt 168019 Query: 343 ccagggcttcctcggcctccccgtcgag 370 ||| ||||||| ||||||||||||||| Sbjct: 168020 ccatggcttccagggcctccccgtcgag 168047 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 419 ttcggcgtgtcgccggagtcgatgcagtgc 448 |||||||||||| ||||||||||||||||| Sbjct: 168180 ttcggcgtgtcgacggagtcgatgcagtgc 168209
>gb|AY364311.1| Oryza sativa (japonica cultivar-group) Rho GTPase activating protein 2 mRNA, complete cds Length = 1552 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 280 ggggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccg 339 ||||||| | || ||| ||||||||||||| || |||||| ||||||||||||||||||| Sbjct: 198 ggggatgcagattggccggcccaccgacgtgcggcacgtctcgcacgtcaccttcgaccg 257 Query: 340 cctccagggcttcctcggcctccccg 365 | || ||| |||||||||||||||| Sbjct: 258 cttcgtggggttcctcggcctccccg 283
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 280 ggggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccg 339 ||||||| | || ||| ||||||||||||| || |||||| ||||||||||||||||||| Sbjct: 27762942 ggggatgcagattggccggcccaccgacgtgcggcacgtctcgcacgtcaccttcgaccg 27763001 Query: 340 cctccagggcttcctcggcctccccg 365 | || ||| |||||||||||||||| Sbjct: 27763002 cttcgtggggttcctcggcctccccg 27763027
>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07 Length = 159046 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 280 ggggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccg 339 ||||||| | || ||| ||||||||||||| || |||||| ||||||||||||||||||| Sbjct: 48275 ggggatgcagattggccggcccaccgacgtgcggcacgtctcgcacgtcaccttcgaccg 48334 Query: 340 cctccagggcttcctcggcctccccg 365 | || ||| |||||||||||||||| Sbjct: 48335 cttcgtggggttcctcggcctccccg 48360
>ref|XM_473604.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1440 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 280 ggggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccg 339 ||||||||| ||||| ||||||| ||||| || |||||| | ||||||||||||||||| Sbjct: 273 ggggatggagatcgggcggcccacggacgtgcggcacgtctcccacgtcaccttcgaccg 332 Query: 340 cctccagggcttcctcggcctccccg 365 | || ||||||||||||||||||| Sbjct: 333 cttcggcggcttcctcggcctccccg 358
>emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020J04, complete sequence Length = 164567 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 280 ggggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccg 339 ||||||||| ||||| ||||||| ||||| || |||||| | ||||||||||||||||| Sbjct: 146241 ggggatggagatcgggcggcccacggacgtgcggcacgtctcccacgtcaccttcgaccg 146300 Query: 340 cctccagggcttcctcggcctccccg 365 | || ||||||||||||||||||| Sbjct: 146301 cttcggcggcttcctcggcctccccg 146326
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 280 ggggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccg 339 ||||||||| ||||| ||||||| ||||| || |||||| | ||||||||||||||||| Sbjct: 29079587 ggggatggagatcgggcggcccacggacgtgcggcacgtctcccacgtcaccttcgaccg 29079646 Query: 340 cctccagggcttcctcggcctccccg 365 | || ||||||||||||||||||| Sbjct: 29079647 cttcggcggcttcctcggcctccccg 29079672
>dbj|AK101984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033078K23, full insert sequence Length = 1698 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 280 ggggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccg 339 ||||||||| ||||| ||||||| ||||| || |||||| | ||||||||||||||||| Sbjct: 331 ggggatggagatcgggcggcccacggacgtgcggcacgtctcccacgtcaccttcgaccg 390 Query: 340 cctccagggcttcctcggcctccccg 365 | || ||||||||||||||||||| Sbjct: 391 cttcggcggcttcctcggcctccccg 416
>dbj|AK067772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120L23, full insert sequence Length = 1695 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 305 gacgtccgccacgtcgcgcacgtcaccttcgaccgcctccagggcttcctcggcctcccc 364 ||||| || |||||| |||||||||||||||||||| || ||| ||||||||||||||| Sbjct: 339 gacgtgcggcacgtctcgcacgtcaccttcgaccgcttcgtggggttcctcggcctcccc 398 Query: 365 g 365 | Sbjct: 399 g 399
>dbj|AK071807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110A09, full insert sequence Length = 2197 Score = 60.0 bits (30), Expect = 7e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 269 ggcggcgggtgggggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtc 328 ||||||| ||| |||||||| || || ||||| || || || | ||||| || |||||| Sbjct: 748 ggcggcgagtgcgggatggagattgggtggccgacggatgtgcagcacgtggcacacgtc 807 Query: 329 accttcgaccgcctccagggcttcctcggcctccccgtcgagttcgagctccagatcccc 388 ||||||||| | |||| || ||||||||||||||||| ||| |||||| | || | ||| Sbjct: 808 accttcgacaggttccatggattcctcggcctccccgtggagctcgagcccgaggttccc 867 Query: 389 tgcccggcccccagtgccagcgccagcgtcttcggcgt 426 ||| ||| |||||||| || || || ||||| ||||| Sbjct: 868 cgccgggctcccagtgcgagtgcaagtgtctttggcgt 905
>gb|AC138196.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032M21 map C83B, complete sequence Length = 48636 Score = 58.0 bits (29), Expect = 3e-05 Identities = 89/109 (81%) Strand = Plus / Plus Query: 269 ggcggcgggtgggggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtc 328 ||||||| ||| |||||||| || || ||||| || || || | ||||| || |||||| Sbjct: 18432 ggcggcgagtgcgggatggagattgggtggccgacggatgtgcagcacgtggcacacgtc 18491 Query: 329 accttcgaccgcctccagggcttcctcggcctccccgtcgagttcgagc 377 ||||||||| | |||| || ||||||||||||||||| ||| |||||| Sbjct: 18492 accttcgacaggttccatggattcctcggcctccccgtggagctcgagc 18540
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 58.0 bits (29), Expect = 3e-05 Identities = 89/109 (81%) Strand = Plus / Plus Query: 269 ggcggcgggtgggggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtc 328 ||||||| ||| |||||||| || || ||||| || || || | ||||| || |||||| Sbjct: 136089 ggcggcgagtgcgggatggagattgggtggccgacggatgtgcagcacgtggcacacgtc 136148 Query: 329 accttcgaccgcctccagggcttcctcggcctccccgtcgagttcgagc 377 ||||||||| | |||| || ||||||||||||||||| ||| |||||| Sbjct: 136149 accttcgacaggttccatggattcctcggcctccccgtggagctcgagc 136197
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 58.0 bits (29), Expect = 3e-05 Identities = 89/109 (81%) Strand = Plus / Plus Query: 269 ggcggcgggtgggggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtc 328 ||||||| ||| |||||||| || || ||||| || || || | ||||| || |||||| Sbjct: 2483992 ggcggcgagtgcgggatggagattgggtggccgacggatgtgcagcacgtggcacacgtc 2484051 Query: 329 accttcgaccgcctccagggcttcctcggcctccccgtcgagttcgagc 377 ||||||||| | |||| || ||||||||||||||||| ||| |||||| Sbjct: 2484052 accttcgacaggttccatggattcctcggcctccccgtggagctcgagc 2484100
>dbj|AK067300.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106C08, full insert sequence Length = 1998 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 281 gggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccgc 340 |||||||| || || ||||| || ||||| | ||||| ||||||||||||||||| | Sbjct: 191 gggatggagatagggtggccgacggacgtgcagcacgtggcgcacgtcaccttcgatagg 250 Query: 341 ctccagggcttcctcggcctccccgtcgagttcgagc 377 |||| || |||||||| |||||||| |||||||||| Sbjct: 251 ttccatggattcctcgggctccccgtggagttcgagc 287
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 58.0 bits (29), Expect = 3e-05 Identities = 89/109 (81%) Strand = Plus / Plus Query: 269 ggcggcgggtgggggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtc 328 ||||||| ||| |||||||| || || ||||| || || || | ||||| || |||||| Sbjct: 2493066 ggcggcgagtgcgggatggagattgggtggccgacggatgtgcagcacgtggcacacgtc 2493125 Query: 329 accttcgaccgcctccagggcttcctcggcctccccgtcgagttcgagc 377 ||||||||| | |||| || ||||||||||||||||| ||| |||||| Sbjct: 2493126 accttcgacaggttccatggattcctcggcctccccgtggagctcgagc 2493174
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 281 gggatggacatcggctggcccaccgacgtccgccacgtcgcgcacgtcaccttcgaccgc 340 |||||||| || || ||||| || ||||| | ||||| ||||||||||||||||| | Sbjct: 80641 gggatggagatagggtggccgacggacgtgcagcacgtggcgcacgtcaccttcgatagg 80582 Query: 341 ctccagggcttcctcggcctccccgtcgagttcgagc 377 |||| || |||||||| |||||||| |||||||||| Sbjct: 80581 ttccatggattcctcgggctccccgtggagttcgagc 80545
>ref|NM_100707.2| Arabidopsis thaliana Rac GTPase activator AT1G08340 mRNA, complete cds Length = 1236 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 309 tccgccacgtcgcgcacgtcaccttcgaccgcctccagggcttcctcggcctccccgtcg 368 |||||||||| || ||||| |||||||| ||| || | |||||||||||||| ||| | Sbjct: 266 tccgccacgtggctcacgttaccttcgatcgcttcgatggcttcctcggccttccctctg 325 Query: 369 agttcgagc 377 ||||||||| Sbjct: 326 agttcgagc 334
>gb|BT014961.1| Arabidopsis thaliana At1g08340 gene, complete cds Length = 996 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 309 tccgccacgtcgcgcacgtcaccttcgaccgcctccagggcttcctcggcctccccgtcg 368 |||||||||| || ||||| |||||||| ||| || | |||||||||||||| ||| | Sbjct: 26 tccgccacgtggctcacgttaccttcgatcgcttcgatggcttcctcggccttccctctg 85 Query: 369 agttcgagc 377 ||||||||| Sbjct: 86 agttcgagc 94
>gb|BT012608.1| Arabidopsis thaliana At1g08340 gene, complete cds Length = 1329 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 309 tccgccacgtcgcgcacgtcaccttcgaccgcctccagggcttcctcggcctccccgtcg 368 |||||||||| || ||||| |||||||| ||| || | |||||||||||||| ||| | Sbjct: 212 tccgccacgtggctcacgttaccttcgatcgcttcgatggcttcctcggccttccctctg 271 Query: 369 agttcgagc 377 ||||||||| Sbjct: 272 agttcgagc 280
>gb|AC011438.3|AC011438 Genomic sequence for Arabidopsis thaliana BAC T23G18 from chromosome I, complete sequence Length = 91470 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 309 tccgccacgtcgcgcacgtcaccttcgaccgcctccagggcttcctcggcctccccgtcg 368 |||||||||| || ||||| |||||||| ||| || | |||||||||||||| ||| | Sbjct: 89251 tccgccacgtggctcacgttaccttcgatcgcttcgatggcttcctcggccttccctctg 89310 Query: 369 agttcgagc 377 ||||||||| Sbjct: 89311 agttcgagc 89319
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 309 tccgccacgtcgcgcacgtcaccttcgaccgcctccagggcttcctcggcctccccgtcg 368 |||||||||| || ||||| |||||||| ||| || | |||||||||||||| ||| | Sbjct: 12167 tccgccacgtggctcacgttaccttcgatcgcttcgatggcttcctcggccttccctctg 12226 Query: 369 agttcgagc 377 ||||||||| Sbjct: 12227 agttcgagc 12235
>gb|BC045500.1| Danio rerio dihydrolipoamide S-succinyltransferase, mRNA (cDNA clone MGC:55935 IMAGE:3819230), complete cds Length = 1898 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcaggtgctg 187 ||||||||||||||||||||||| |||| Sbjct: 584 gcaggggcagcagcaggggcaggggctg 557
>gb|BC065943.1| Danio rerio dihydrolipoamide S-succinyltransferase, mRNA (cDNA clone MGC:77238 IMAGE:6963253), complete cds Length = 1926 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcaggtgctg 187 ||||||||||||||||||||||| |||| Sbjct: 579 gcaggggcagcagcaggggcaggggctg 552
>ref|XM_697419.1| PREDICTED: Danio rerio hypothetical protein LOC554831 (LOC554831), mRNA Length = 1887 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcaggtgctg 187 ||||||||||||||||||||||| |||| Sbjct: 585 gcaggggcagcagcaggggcaggggctg 558
>gb|AC092782.2| Homo sapiens chromosome 1 clone RP11-411G13, complete sequence Length = 155355 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 264 cggggggcggcgggtgggggatgg 287 |||||||||||||||||||||||| Sbjct: 144744 cggggggcggcgggtgggggatgg 144767
>gb|AC092806.2| Homo sapiens chromosome 1 clone RP11-156F12, complete sequence Length = 153527 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 264 cggggggcggcgggtgggggatgg 287 |||||||||||||||||||||||| Sbjct: 36133 cggggggcggcgggtgggggatgg 36156
>gb|AY190950.1| Drosophila willistoni clone DWIF01_1_E5 (D1417) genomic sequence Length = 40487 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 166 gcagcagcaggggcaggtgctggagctgctgc 197 ||||||||||| ||||| |||||||||||||| Sbjct: 7558 gcagcagcaggagcaggagctggagctgctgc 7589
>dbj|BS000236.1| Pan troglodytes chromosome 22 clone:PTB-058L13, map 22, complete sequences Length = 160456 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcagg 182 |||||||||||||||||||||||| Sbjct: 103200 ggcaggggcagcagcaggggcagg 103177 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcag 181 ||||||||||||||||||||||| Sbjct: 103134 ggcaggggcagcagcaggggcag 103112 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||| |||||||||||||||||| Sbjct: 103218 ggcagaggcagcagcaggggcagg 103195
>emb|BX927356.22| Zebrafish DNA sequence from clone DKEY-54K20 in linkage group 17, complete sequence Length = 204195 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 160 gcaggggcagcagcaggggcaggtgctg 187 ||||||||||||||||||||||| |||| Sbjct: 87956 gcaggggcagcagcaggggcaggggctg 87983
>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105 Length = 340000 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcagg 182 |||||||||||||||||||||||| Sbjct: 167512 ggcaggggcagcagcaggggcagg 167489 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcagg 182 |||||||||||||||||||||||| Sbjct: 167458 ggcaggggcagcagcaggggcagg 167435 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||| |||||||||||||||||| Sbjct: 167530 ggcagaggcagcagcaggggcagg 167507
>emb|AL935141.16| Zebrafish DNA sequence from clone CH211-173A9 in linkage group 17, complete sequence Length = 136178 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcaggtgctg 187 ||||||||||||||||||||||| |||| Sbjct: 17765 gcaggggcagcagcaggggcaggggctg 17738
>ref|NM_201487.1| Danio rerio dihydrolipoamide S-succinyltransferase (dlst), mRNA Length = 1898 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcaggtgctg 187 ||||||||||||||||||||||| |||| Sbjct: 584 gcaggggcagcagcaggggcaggggctg 557
>dbj|AP001047.1| Homo sapiens genomic DNA, chromosome 21, clone:D45D10, MX1-D21S171 region, complete sequence Length = 38102 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcagg 182 |||||||||||||||||||||||| Sbjct: 12339 ggcaggggcagcagcaggggcagg 12316 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcagg 182 |||||||||||||||||||||||| Sbjct: 12285 ggcaggggcagcagcaggggcagg 12262 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||| |||||||||||||||||| Sbjct: 12357 ggcagaggcagcagcaggggcagg 12334
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 398 cccagtgccagcgccagcgtcttcggcgtgt 428 ||||| ||||||||||||||| ||||||||| Sbjct: 3416085 cccagcgccagcgccagcgtcgtcggcgtgt 3416115
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, complete sequence Length = 123580 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 242 gacgccgacgacccggccgccgc 264 ||||||||||||||||||||||| Sbjct: 7568 gacgccgacgacccggccgccgc 7590
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 241 ggacgccgacgacccggccgccg 263 ||||||||||||||||||||||| Sbjct: 151167 ggacgccgacgacccggccgccg 151189 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 241 ggacgccgacgacccggccgccg 263 ||||||||||||||||||||||| Sbjct: 132136 ggacgccgacgacccggccgccg 132114
>gb|AF016585.1|AF016585 Streptomyces caelestis cytochrome P-450 hydroxylase homolog (nidi) gene, partial cds; polyketide synthase modules 1 through 7 (nidA) genes, complete cds; and N-methyltransferase homolog gene, partial cds Length = 41097 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 238 ggcggacgccgacgacccggccgccgc 264 |||||||||||||||||||||| |||| Sbjct: 23279 ggcggacgccgacgacccggccaccgc 23305
>ref|XM_870106.1| PREDICTED: Bos taurus similar to paired immunoglobulin-like type 2 receptor alpha isoform 1 precursor (LOC617785), partial mRNA Length = 824 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcag 181 |||||||||||||||||||||| Sbjct: 104 gcaggggcagcagcaggggcag 83
>ref|XM_589992.2| PREDICTED: Bos taurus similar to paired immunoglobulin-like type 2 receptor alpha isoform 1 precursor (LOC512471), mRNA Length = 2593 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcag 181 |||||||||||||||||||||| Sbjct: 106 gcaggggcagcagcaggggcag 85
>gb|BC066165.1| Mus musculus wingless-type MMTV integration site 9A, mRNA (cDNA clone MGC:76532 IMAGE:30435371), complete cds Length = 3306 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 86 gctgctgctcgccgcgctgcgc 107
>ref|XM_990739.1| PREDICTED: Mus musculus hypothetical protein LOC672040 (LOC672040), mRNA Length = 669 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 gcaggggcagcagcaggggcag 181 |||||||||||||||||||||| Sbjct: 462 gcaggggcagcagcaggggcag 483 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 aggggcagcagcaggggcag 181 |||||||||||||||||||| Sbjct: 329 aggggcagcagcaggggcag 348
>ref|XM_975251.1| PREDICTED: Mus musculus hypothetical protein LOC674509 (LOC674509), mRNA Length = 1011 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 gcaggggcagcagcaggggcag 181 |||||||||||||||||||||| Sbjct: 645 gcaggggcagcagcaggggcag 666 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 gcaggggcagcagcaggggcag 181 |||||||||||||||||||||| Sbjct: 528 gcaggggcagcagcaggggcag 549 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 gcaggggcagcagcaggggcag 181 |||||||||||||||||||||| Sbjct: 447 gcaggggcagcagcaggggcag 468 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 gcaggggcagcagcaggggcag 181 |||||||||||||||||||||| Sbjct: 417 gcaggggcagcagcaggggcag 438
>ref|XM_001000714.1| PREDICTED: Mus musculus hypothetical protein LOC668292 (LOC668292), mRNA Length = 669 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 gcaggggcagcagcaggggcag 181 |||||||||||||||||||||| Sbjct: 462 gcaggggcagcagcaggggcag 483 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 aggggcagcagcaggggcag 181 |||||||||||||||||||| Sbjct: 329 aggggcagcagcaggggcag 348
>gb|AC091152.18| Homo sapiens chromosome 17, clone RP11-1072C15, complete sequence Length = 181835 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 gaggcaggggcagcagcaggggcagg 182 |||||||||||||| ||||||||||| Sbjct: 79646 gaggcaggggcagcggcaggggcagg 79671
>emb|AL360269.21| Human DNA sequence from clone RP11-192I3 on chromosome 1 Contains the WNT9A gene for wingless-type MMTV integration site family, member 9A and a CpG island, complete sequence Length = 141703 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 94425 gctgctgctcgccgcgctgcgc 94404
>gb|AC157990.4| Mus musculus chromosome 5, clone RP24-307I24, complete sequence Length = 153860 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 gcaggggcagcagcaggggcag 181 |||||||||||||||||||||| Sbjct: 45989 gcaggggcagcagcaggggcag 46010
>emb|AL713994.15| Mouse DNA sequence from clone RP23-378H5 on chromosome 11 Contains the 5' end of the Arf-1 gene for ADP-ribosylation factor 1, the Wnt3a gene for wingless-related MMTV integration site 3A, the Wnt9a gene for wingless-type MMTV integration site 9A, two novel genes, the 5' end of a novel gene and five CpG islands, complete sequence Length = 225396 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 79889 gctgctgctcgccgcgctgcgc 79910
>emb|AL603702.14| Mouse DNA sequence from clone RP23-406A14 on chromosome 11 Contains a protease (prosome, macropain) 26S subunit ATPase 1 (Psmc1) pseudogene and a CpG island, complete sequence Length = 197265 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcag 181 |||||||||||||||||||||| Sbjct: 50273 gcaggggcagcagcaggggcag 50252 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcag 181 |||||||||||||||||||||| Sbjct: 50219 gcaggggcagcagcaggggcag 50198 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcag 181 |||||||||||||||||||||| Sbjct: 50096 gcaggggcagcagcaggggcag 50075 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcag 181 |||||||||||||||||||||| Sbjct: 49961 gcaggggcagcagcaggggcag 49940 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcag 181 |||||||||||||||||||||| Sbjct: 49907 gcaggggcagcagcaggggcag 49886
>gb|AF298594.1| Nicotiana alata arabinogalactan protein (Agp4) gene, complete cds Length = 2441 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 157 gaggcaggggcagcagcaggggcagg 182 ||||||||||||| |||||||||||| Sbjct: 476 gaggcaggggcagtagcaggggcagg 451
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 188 gagctgctgctcgccgcgctgc 209 |||||||||||||||||||||| Sbjct: 73905 gagctgctgctcgccgcgctgc 73884
>dbj|AK087490.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130305L02 product:WNT14 homolog [Homo sapiens], full insert sequence Length = 3325 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 100 gctgctgctcgccgcgctgcgc 121
>ref|NM_139298.2| Mus musculus wingless-type MMTV integration site 9A (Wnt9a), mRNA Length = 3318 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 97 gctgctgctcgccgcgctgcgc 118
>gb|AC004916.2|AC004916 Homo sapiens PAC clone RP5-891L14 from 7p22, complete sequence Length = 129014 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 107139 gctgctgctcgccgcgctgcgc 107160
>ref|NM_003395.1| Homo sapiens wingless-type MMTV integration site family, member 9A (WNT9A), mRNA Length = 1631 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 65 gctgctgctcgccgcgctgcgc 86
>ref|XM_220556.3| PREDICTED: Rattus norvegicus wingless-type MMTV integration site 9A (predicted) (Wnt9a_predicted), mRNA Length = 1471 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 426 gctgctgctcgccgcgctgcgc 447
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 cgtccgccacgtcgcgcacgtc 328 |||||||||||||||||||||| Sbjct: 895454 cgtccgccacgtcgcgcacgtc 895433 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 gctggagctgctgctcgccgcgct 207 ||||||||||||||||| |||||| Sbjct: 3323245 gctggagctgctgctcgacgcgct 3323268 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 gccgccgcggggggcggcgggtgg 280 |||||||||| ||||||||||||| Sbjct: 2952294 gccgccgcggcgggcggcgggtgg 2952271
>gb|AY888609.1| Synthetic construct Homo sapiens clone FLH117699.01X wingless-type MMTV integration site family member 9A (WNT9A) mRNA, complete cds Length = 1098 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 54 gctgctgctcgccgcgctgcgc 75
>gb|AY891253.1| Synthetic construct Homo sapiens clone FLH117695.01L wingless-type MMTV integration site family member 9A (WNT9A) mRNA, partial cds Length = 1098 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 54 gctgctgctcgccgcgctgcgc 75
>dbj|AK131041.1| Homo sapiens cDNA FLJ29007 fis, clone STM04662, highly similar to WNT-14 protein precursor Length = 1735 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 97 gctgctgctcgccgcgctgcgc 118
>gb|AY893791.1| Synthetic construct Homo sapiens clone FLH053361.01L wingless-type MMTV integration site family member 9A (WNT9A) mRNA, partial cds Length = 1098 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 54 gctgctgctcgccgcgctgcgc 75
>gb|AY893346.1| Synthetic construct Homo sapiens clone FLH053364.01X wingless-type MMTV integration site family member 9A (WNT9A) mRNA, complete cds Length = 1098 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 54 gctgctgctcgccgcgctgcgc 75
>emb|AJ334461.1|HSA334461 Homo sapiens genomic sequence surrounding NotI site, clone NL1-HD16R Length = 815 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 117 gctgctgctcgccgcgctgcgc 138
>emb|AJ334354.1|HSA334354 Homo sapiens genomic sequence surrounding NotI site, clone NR1-XL5R Length = 695 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 118 gctgctgctcgccgcgctgcgc 139
>emb|AJ335030.1|HSA335030 Homo sapiens genomic sequence surrounding NotI site, clone NL1-VH19R Length = 859 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 117 gctgctgctcgccgcgctgcgc 138
>emb|AJ327619.1|HSA327619 Homo sapiens genomic sequence surrounding NotI site, clone NR1-CD3R Length = 738 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 117 gctgctgctcgccgcgctgcgc 138
>gb|BC111960.1| Homo sapiens wingless-type MMTV integration site family, member 9A, mRNA (cDNA clone MGC:138165 IMAGE:8327428), complete cds Length = 1240 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 142 gctgctgctcgccgcgctgcgc 163
>ref|NM_209911.1| Eremothecium gossypii AEL302Wp (AEL302W), mRNA Length = 1329 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 188 gagctgctgctcgccgcgctgc 209 |||||||||||||||||||||| Sbjct: 452 gagctgctgctcgccgcgctgc 431
>gb|AC102730.15| Mus musculus chromosome 5, clone RP24-194J15, complete sequence Length = 167135 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcag 181 |||||||||||||||||||||| Sbjct: 67172 gcaggggcagcagcaggggcag 67151
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 164 gggcagcagcaggggcaggtgctgga 189 |||||||||||| ||||||||||||| Sbjct: 3018663 gggcagcagcagtggcaggtgctgga 3018688
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 196 gctcgccgcgctgcgcaagtcg 217 |||||||||||||||||||||| Sbjct: 2594222 gctcgccgcgctgcgcaagtcg 2594243
>dbj|AB072311.1| Mus musculus mRNA for Wnt14, complete cds Length = 1106 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 61 gctgctgctcgccgcgctgcgc 82
>dbj|AB060283.1| Homo sapiens mRNA for WNT14, complete cds Length = 1631 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgcgc 211 |||||||||||||||||||||| Sbjct: 65 gctgctgctcgccgcgctgcgc 86
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 cccggcccccagtgccagcgc 411 ||||||||||||||||||||| Sbjct: 793689 cccggcccccagtgccagcgc 793709
>ref|XM_525081.1| PREDICTED: Pan troglodytes similar to wingless-type MMTV integration site family, member 9A; wingless-type MMTV integration site family, member 14 (LOC469697), mRNA Length = 3864 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 ctgctgctcgccgcgctgcgc 211 ||||||||||||||||||||| Sbjct: 937 ctgctgctcgccgcgctgcgc 957
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 gagctgctgctcgccgcgctg 208 ||||||||||||||||||||| Sbjct: 3045035 gagctgctgctcgccgcgctg 3045055
>ref|XM_360850.1| Magnaporthe grisea 70-15 hypothetical protein (MG03393.4) partial mRNA Length = 1185 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcaggtgctggagctgctg 196 ||||| |||| |||||||||||| ||||| ||||||| Sbjct: 974 gcaggagcaggagcaggggcaggcgctggggctgctg 938
>ref|XM_951129.1| Neurospora crassa OR74A hypothetical protein (NCU08779.1) partial mRNA Length = 2595 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 aggggcagcagcaggggcagg 182 ||||||||||||||||||||| Sbjct: 1923 aggggcagcagcaggggcagg 1903
>gb|AY186579.1| Didelphis virginiana sodium dicarboxylate co-transporter mRNA, complete cds Length = 2404 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 150 accaggagaggcaggggcagcagca 174 |||||||| |||||||||||||||| Sbjct: 131 accaggaggggcaggggcagcagca 107
>ref|XM_330895.1| Neurospora crassa OR74A hypothetical protein (NCU08779.1) partial mRNA Length = 2595 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 aggggcagcagcaggggcagg 182 ||||||||||||||||||||| Sbjct: 1923 aggggcagcagcaggggcagg 1903
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 183 tgctggagctgctgctcgccgcgct 207 |||||| |||||||||||||||||| Sbjct: 65668 tgctggcgctgctgctcgccgcgct 65692
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ggcaggtgctggagctgctgc 197 ||||||||||||||||||||| Sbjct: 4914923 ggcaggtgctggagctgctgc 4914903
>gb|AC158612.7| Mus musculus 10 BAC RP23-39I3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206234 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 154 ggagaggcaggggcagcagcagggg 178 ||||||||||||| ||||||||||| Sbjct: 75862 ggagaggcaggggaagcagcagggg 75838 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 aggcaggggcagcagcaggggcag 181 ||||||||| |||||||||||||| Sbjct: 75907 aggcagggggagcagcaggggcag 75884
>gb|AC158603.6| Mus musculus 10 BAC RP24-466C12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 149929 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 ggagaggcaggggcagcagcagggg 178 ||||||||||||| ||||||||||| Sbjct: 5252 ggagaggcaggggaagcagcagggg 5276 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 aggcaggggcagcagcaggggcag 181 ||||||||| |||||||||||||| Sbjct: 5207 aggcagggggagcagcaggggcag 5230
>gb|AC140477.2| Mus musculus BAC clone RP24-132G6 from chromosome 12, complete sequence Length = 185642 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 aggcaggggcagcagcaggggcagg 182 |||||||||||| |||||||||||| Sbjct: 33313 aggcaggggcaggagcaggggcagg 33289
>gb|AC183613.3| Pan troglodytes BAC clone CH251-171F23 from chromosome 7, complete sequence Length = 180545 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 ggggcagcagcaggggcaggt 183 ||||||||||||||||||||| Sbjct: 124017 ggggcagcagcaggggcaggt 123997
>gb|AC073846.6| Homo sapiens BAC clone RP11-622P13 from 7, complete sequence Length = 123004 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 ggggcagcagcaggggcaggt 183 ||||||||||||||||||||| Sbjct: 31691 ggggcagcagcaggggcaggt 31671
>gb|AF259413.1| Calonitophyllum medium clone cmedCBS large subunit ribosomal RNA gene, partial sequence Length = 1305 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 398 cccagtgccagcgccagcgtcttcg 422 |||||||||| |||||||||||||| Sbjct: 1134 cccagtgccatcgccagcgtcttcg 1110
>gb|AC124336.10| Mus musculus chromosome 18, clone RP24-125A2, complete sequence Length = 193807 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 156 agaggcaggggcagcagcaggggcaggtg 184 |||||||||||||| ||||||||||||| Sbjct: 70112 agaggcaggggcaggggcaggggcaggtg 70084
>ref|XM_849847.1| PREDICTED: Canis familiaris hypothetical protein LOC612121 (LOC612121), mRNA Length = 1194 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 caggggcagcagcaggggcag 181 ||||||||||||||||||||| Sbjct: 991 caggggcagcagcaggggcag 971
>gb|AC102069.13| Mus musculus chromosome 18, clone RP23-304K8, complete sequence Length = 156706 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 156 agaggcaggggcagcagcaggggcaggtg 184 |||||||||||||| ||||||||||||| Sbjct: 11677 agaggcaggggcaggggcaggggcaggtg 11649
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 cccggcccccagtgccagcgc 411 ||||||||||||||||||||| Sbjct: 871980 cccggcccccagtgccagcgc 872000
>gb|AC148058.4| Callicebus moloch clone LB5-358H21, complete sequence Length = 151378 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 aggggcagcagcaggggcagg 182 ||||||||||||||||||||| Sbjct: 78753 aggggcagcagcaggggcagg 78773
>gb|AC182351.3| Ateles geoffroyi clone UC1-76C3, complete sequence Length = 212614 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 aggggcagcagcaggggcagg 182 ||||||||||||||||||||| Sbjct: 128599 aggggcagcagcaggggcagg 128619
>gb|AC107505.6| Rattus norvegicus 18 BAC CH230-129O15 (Children's Hospital Oakland Research Institute) complete sequence Length = 219880 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcaggtgctggagc 191 ||||||||||| |||||||||||| || ||||| Sbjct: 156513 ggcaggggcaggagcaggggcaggggcaggagc 156481 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||||||||| |||||||||||| Sbjct: 156591 ggcaggggcaggagcaggggcagg 156568 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||||||||| |||||||||||| Sbjct: 156495 ggcaggggcaggagcaggggcagg 156472
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 cccggcccccagtgccagcgc 411 ||||||||||||||||||||| Sbjct: 848850 cccggcccccagtgccagcgc 848870
>emb|AL133215.17| Human DNA sequence from clone RP11-108L7 on chromosome 10 Contains the 3' end of the C10orf6 gene for chromosome 10 open reading frame 6, the SEMA4G gene for sema domain immunoglobulin domain (Ig) transmembrane domain (TM) and short cytoplasmic domain (semaphorin) 4G, the MRPL43 gene for mitochondrial ribosomal protein L43, the C10orf2 gene for chromosome 10 open reading frame 2, the gene for a novel protein (KIAA1813) (LAPSER1), a novel gene, the gene for a novel protein (FLJ23209 FLJ00011), the gene for a novel tricarboxylate carrier domain containing protein (FLJ34185 FLJ35692), the gene for a novel kazal-type serine protease inhibitor domain and immunoglobulin domain containing protein (FKSG28) (FKSG4), the 3' end of a novel gene and six CpG islands, complete sequence Length = 181086 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 154 ggagaggcaggggcagcagcaggggcagg 182 |||| ||||||||||| |||||||||||| Sbjct: 23626 ggaggggcaggggcaggagcaggggcagg 23598
>emb|AL024507.7|HS191J18 Human DNA sequence from clone RP1-191J18 on chromosome 6q16.1-22.33 Contains the SEC63 gene for SEC63-like (S. cerevisiae), a 60S ribosomal protein 23A (RPL23A) pseudogene, a ribosomal protein L14 (RPL14) pseudogene, a pseudogene similar to part of methylene tetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase (MTHFD2) (NMDMC) and three CpG islands, complete sequence Length = 152408 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 154 ggagaggcaggggcagcagcaggggcagg 182 |||||||||||||||| ||||||||||| Sbjct: 65855 ggagaggcaggggcaggggcaggggcagg 65883
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 gagctgctgctcgccgcgctg 208 ||||||||||||||||||||| Sbjct: 4039017 gagctgctgctcgccgcgctg 4038997 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gctgctgctcgccgcgctgc 209 |||||||||||||||||||| Sbjct: 2160160 gctgctgctcgccgcgctgc 2160141
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 179 caggtgctggagctgctgctcgccg 203 |||||||||||||||||||| |||| Sbjct: 112274 caggtgctggagctgctgctggccg 112298
>gb|AF067309.1| Stealth virus 1 clone 3B544 T3 Length = 817 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 tggcggacgccgacgacccgg 257 ||||||||||||||||||||| Sbjct: 465 tggcggacgccgacgacccgg 445
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 cccggcccccagtgccagcgc 411 ||||||||||||||||||||| Sbjct: 850049 cccggcccccagtgccagcgc 850069
>ref|XM_940977.1| PREDICTED: Homo sapiens similar to ciliary rootlet coiled-coil, rootletin (LOC651758), mRNA Length = 5258 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 263 gcggggggcggcgggtgggggatgg 287 |||||||||||| |||||||||||| Sbjct: 2783 gcggggggcggctggtgggggatgg 2759
>ref|XM_209505.5| PREDICTED: Homo sapiens similar to ciliary rootlet coiled-coil, rootletin (LOC285188), mRNA Length = 5363 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 263 gcggggggcggcgggtgggggatgg 287 |||||||||||| |||||||||||| Sbjct: 2888 gcggggggcggctggtgggggatgg 2864
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 ggcggacgccgacgacccggccgcc 262 ||||| ||||||||||||||||||| Sbjct: 4721825 ggcggtcgccgacgacccggccgcc 4721801
>gb|AC121223.5| Rattus norvegicus BAC CH230-70M4 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 263147 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcaggtgctggagc 191 ||||||||||| |||||||||||| || ||||| Sbjct: 16356 ggcaggggcaggagcaggggcaggggcaggagc 16324 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||||||||| |||||||||||| Sbjct: 16434 ggcaggggcaggagcaggggcagg 16411 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||||||||| |||||||||||| Sbjct: 16338 ggcaggggcaggagcaggggcagg 16315
>gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosome 1, complete sequence Length = 133079 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggca 180 ||||||||||||||||||||| Sbjct: 51064 gcaggggcagcagcaggggca 51044
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 ggcctccccgtcgagttcgag 376 ||||||||||||||||||||| Sbjct: 25949720 ggcctccccgtcgagttcgag 25949740 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gccgccgcggggggcggcgg 276 |||||||||||||||||||| Sbjct: 4030814 gccgccgcggggggcggcgg 4030833
>gb|AC104809.5| Homo sapiens BAC clone RP11-637O3 from 2, complete sequence Length = 167196 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 263 gcggggggcggcgggtgggggatgg 287 |||||||||||| |||||||||||| Sbjct: 46845 gcggggggcggctggtgggggatgg 46869
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 cccggcccccagtgccagcgc 411 ||||||||||||||||||||| Sbjct: 789846 cccggcccccagtgccagcgc 789866
>gb|AC141636.4| Mus musculus BAC clone RP23-471D17 from chromosome 19, complete sequence Length = 165424 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcaggtgctggagc 191 ||||||||||| ||||||||||| |||||||| Sbjct: 40752 ggcaggggcaggggcaggggcaggggctggagc 40720
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 gaccgcctccagggcttcctc 355 ||||||||||||||||||||| Sbjct: 111119 gaccgcctccagggcttcctc 111139
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017B12 Length = 157424 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 ggcctccccgtcgagttcgag 376 ||||||||||||||||||||| Sbjct: 104818 ggcctccccgtcgagttcgag 104838
>dbj|AK109099.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-A12, full insert sequence Length = 1237 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 154 ggagaggcaggggcagcagcaggggcagg 182 |||||||||||||||| ||||||||||| Sbjct: 371 ggagaggcaggggcagaggcaggggcagg 399
>gb|AF065752.1|AF065752 Stealth virus 1 clone 3B20 T7 Length = 672 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 tggcggacgccgacgacccgg 257 ||||||||||||||||||||| Sbjct: 465 tggcggacgccgacgacccgg 445
>dbj|AK101482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041F01, full insert sequence Length = 4632 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 ggcctccccgtcgagttcgag 376 ||||||||||||||||||||| Sbjct: 486 ggcctccccgtcgagttcgag 506
>gb|AC102777.12| Mus musculus chromosome 1, clone RP23-5K7, complete sequence Length = 195874 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 154 ggagaggcaggggcagcagcaggggcagg 182 |||||||||||||||| ||||||||||| Sbjct: 24144 ggagaggcaggggcaggggcaggggcagg 24172
>gb|U27212.2|SVU27212 Stealth virus clone 3B642 T7 Length = 6700 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 tggcggacgccgacgacccgg 257 ||||||||||||||||||||| Sbjct: 6236 tggcggacgccgacgacccgg 6256
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 ctgctgctcgccgcgctgcgc 211 ||||||||||||||||||||| Sbjct: 3130 ctgctgctcgccgcgctgcgc 3110 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 gctggagctgctgctcgccgcgct 207 ||||| |||||||||||||||||| Sbjct: 875016 gctggtgctgctgctcgccgcgct 875039
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 gaccgcctccagggcttcctc 355 ||||||||||||||||||||| Sbjct: 1801646 gaccgcctccagggcttcctc 1801626
>gb|AC131790.4| Mus musculus BAC clone RP24-447L18 from 3, complete sequence Length = 170634 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 ggcaggggcagcagcaggggcaggt 183 ||||||||||| ||||||||||||| Sbjct: 3058 ggcaggggcaggagcaggggcaggt 3082
>gb|U27641.1|SVU27641 Stealth virus 1 clone 3B550 T3 Length = 845 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 tggcggacgccgacgacccgg 257 ||||||||||||||||||||| Sbjct: 465 tggcggacgccgacgacccgg 445
>gb|U27939.1|SVU27939 Stealth virus 1 clone C16149 T7.1 Length = 834 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 tggcggacgccgacgacccgg 257 ||||||||||||||||||||| Sbjct: 110 tggcggacgccgacgacccgg 90
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 cccggcccccagtgccagcgc 411 ||||||||||||||||||||| Sbjct: 975589 cccggcccccagtgccagcgc 975609
>gb|AC151371.4| Aotus nancymaae clone CH258-333O11, complete sequence Length = 103418 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 aggggcagcagcaggggcagg 182 ||||||||||||||||||||| Sbjct: 52049 aggggcagcagcaggggcagg 52069
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 cccggcccccagtgccagcgc 411 ||||||||||||||||||||| Sbjct: 973933 cccggcccccagtgccagcgc 973953
>gb|AC132241.3| Mus musculus BAC clone RP24-413I2 from chromosome 1, complete sequence Length = 138670 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggca 180 ||||||||||||||||||||| Sbjct: 124371 gcaggggcagcagcaggggca 124351
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 aggggcagcagcaggggcagg 182 ||||||||||||||||||||| Sbjct: 745630 aggggcagcagcaggggcagg 745650
>gb|U27798.1|SVU27798 Stealth virus clone C1622 T3 Length = 515 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 tggcggacgccgacgacccgg 257 ||||||||||||||||||||| Sbjct: 108 tggcggacgccgacgacccgg 88
>emb|AL805910.7| Mouse DNA sequence from clone RP23-144K17 on chromosome 4, complete sequence Length = 200933 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 154 ggagaggcaggggcagcagcaggggcagg 182 |||||||||||||||| ||||||||||| Sbjct: 50576 ggagaggcaggggcaggggcaggggcagg 50604
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 cccggcccccagtgccagcgc 411 ||||||||||||||||||||| Sbjct: 719302 cccggcccccagtgccagcgc 719322
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 cccggcccccagtgccagcgc 411 ||||||||||||||||||||| Sbjct: 839791 cccggcccccagtgccagcgc 839811
>gb|AC134027.2| Homo sapiens 3 BAC RP11-358B24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 139300 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcaggtg 184 |||||||||||| |||||||||||| Sbjct: 113841 gcaggggcagcaccaggggcaggtg 113817
>gb|U04242.1|ECU04242 Escherichia coli core starvation protein PexB (pexB) gene, complete cds Length = 2859 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 cccggcccccagtgccagcgc 411 ||||||||||||||||||||| Sbjct: 1234 cccggcccccagtgccagcgc 1214
>dbj|AB017438.1| Streptomyces coelicolor orf1, orf2, orf3, orf4, orf5 genes, complete cds Length = 6530 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 179 caggtgctggagctgctgctcgccg 203 |||||||||||||||||||| |||| Sbjct: 4757 caggtgctggagctgctgctggccg 4733
>gb|AC110244.10| Mus musculus chromosome 5, clone RP23-247E10, complete sequence Length = 214638 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||||||||| |||||||||||| Sbjct: 59740 ggcaggggcaggagcaggggcagg 59763
>gb|AC163399.6| Mus musculus chromosome 18, clone RP24-66G13, complete sequence Length = 173868 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||||||||| |||||||||||| Sbjct: 27583 ggcaggggcaggagcaggggcagg 27606
>ref|XM_476334.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1260 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gccgccgcggggggcggcgg 276 |||||||||||||||||||| Sbjct: 115 gccgccgcggggggcggcgg 134
>ref|NM_212667.1| Danio rerio dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) (dlat), mRNA Length = 1959 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 152 caggagaggcaggggcagcagcaggggc 179 |||||| |||||| |||||||||||||| Sbjct: 1036 caggagcggcaggagcagcagcaggggc 1009
>ref|NM_175047.2| Homo sapiens paired immunoglobin-like type 2 receptor beta (PILRB), transcript variant 2, mRNA Length = 2956 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 2057 gcaggggcagcagcaggggc 2038
>ref|NM_013440.3| Homo sapiens paired immunoglobin-like type 2 receptor beta (PILRB), transcript variant 1, mRNA Length = 3632 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 2524 gcaggggcagcagcaggggc 2505
>ref|NM_178238.1| Homo sapiens paired immunoglobin-like type 2 receptor beta (PILRB), transcript variant 3, mRNA Length = 1436 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 328 gcaggggcagcagcaggggc 309
>gb|AC098849.9| Mus musculus chromosome 3, clone RP23-12L23, complete sequence Length = 210441 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ctcacccagtcactctcctc 38 |||||||||||||||||||| Sbjct: 29938 ctcacccagtcactctcctc 29957
>gb|AC139042.18| Mus musculus chromosome 18, clone RP23-261C19, complete sequence Length = 195202 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||||||||| |||||||||||| Sbjct: 104966 ggcaggggcaggagcaggggcagg 104989
>gb|AC109205.12| Mus musculus chromosome 7, clone RP23-137A4, complete sequence Length = 225302 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 163655 gcaggggcagcagcaggggc 163636
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 gcagcaggggcaggtgctggagct 192 |||||||| ||||||||||||||| Sbjct: 361841 gcagcaggagcaggtgctggagct 361864
>gb|AC160995.4| Mus musculus BAC clone RP23-96D5 from chromosome 13, complete sequence Length = 235237 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||||||||| |||||||||||| Sbjct: 152232 ggcaggggcaggagcaggggcagg 152255
>gb|AC131980.9| Mus musculus chromosome 1, clone RP24-170O7, complete sequence Length = 200100 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||||||||| |||||||||||| Sbjct: 105821 ggcaggggcaggagcaggggcagg 105798
>gb|AC150753.3| Bos taurus BAC CH240-283G19 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 181464 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 agaggcaggggcagcagcag 175 |||||||||||||||||||| Sbjct: 5650 agaggcaggggcagcagcag 5631
>gb|AC116728.12| Mus musculus chromosome 3, clone RP23-345H12, complete sequence Length = 192916 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ctcacccagtcactctcctc 38 |||||||||||||||||||| Sbjct: 55607 ctcacccagtcactctcctc 55588
>gb|AC100427.25| Mus musculus chromosome 10, clone RP23-136J15, complete sequence Length = 206339 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 155 gagaggcaggggcagcagcaggggcagg 182 ||||||||||||||| ||||||||||| Sbjct: 27808 gagaggcaggggcaggggcaggggcagg 27781
>gb|AC145748.4| Mus musculus BAC clone RP23-31L10 from chromosome 5, complete sequence Length = 220208 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||||||||||||||||| |||| Sbjct: 72267 ggcaggggcagcagcagggacagg 72244
>ref|XM_324403.1| Neurospora crassa OR74A predicted protein (NCU05047.1) partial mRNA Length = 8979 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcaggtgctggagc 191 |||||||||| |||||||||||| || ||||| Sbjct: 7613 gcaggggcaggagcaggggcaggagcgggagc 7582
>ref|XM_951328.1| Neurospora crassa OR74A hypothetical protein (NCU05047.1) partial mRNA Length = 8979 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggcaggtgctggagc 191 |||||||||| |||||||||||| || ||||| Sbjct: 7613 gcaggggcaggagcaggggcaggagcgggagc 7582
>ref|XM_958103.1| Neurospora crassa OR74A hypothetical protein ( (AL451019) conserved hypothetical protein [Neurospora crassa OR74A] ) (NCU05383.1) partial mRNA Length = 3015 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 166 gcagcagcaggggcaggtgctggagctg 193 |||| |||||||||||| |||||||||| Sbjct: 2882 gcaggagcaggggcaggagctggagctg 2855
>ref|XM_325237.1| Neurospora crassa OR74A hypothetical protein ( (AL451019) conserved hypothetical protein [Neurospora crassa OR74A] ) (NCU05383.1) partial mRNA Length = 3015 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 166 gcagcagcaggggcaggtgctggagctg 193 |||| |||||||||||| |||||||||| Sbjct: 2882 gcaggagcaggggcaggagctggagctg 2855
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tgctcgccgcgctgcgcaag 214 |||||||||||||||||||| Sbjct: 2853685 tgctcgccgcgctgcgcaag 2853666
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gctgctgctcgccgcgctgc 209 |||||||||||||||||||| Sbjct: 2214492 gctgctgctcgccgcgctgc 2214511 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gagctgctgctcgccgcgct 207 |||||||||||||||||||| Sbjct: 187245 gagctgctgctcgccgcgct 187226
>gb|AC146605.3| Mus musculus BAC clone RP23-304J7 from chromosome 14, complete sequence Length = 225868 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 agaggcaggggcagcagcag 175 |||||||||||||||||||| Sbjct: 90739 agaggcaggggcagcagcag 90720
>gb|AC147160.2| Mus musculus BAC clone RP24-336A22 from chromosome 15, complete sequence Length = 205374 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||||||||| |||||||||||| Sbjct: 104104 ggcaggggcaggagcaggggcagg 104127
>gb|AC166992.2| Mus musculus BAC clone RP24-144F18 from chromosome 9, complete sequence Length = 193799 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 ggagaggcaggggcagcagcaggggcag 181 |||||||||||||||| |||||||||| Sbjct: 27346 ggagaggcaggggcaggggcaggggcag 27373
>gb|AY188775.1| Danio rerio dihydrolipoamide S-acetyltransferase (dlat) mRNA, complete cds Length = 1959 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 152 caggagaggcaggggcagcagcaggggc 179 |||||| |||||| |||||||||||||| Sbjct: 1036 caggagcggcaggagcagcagcaggggc 1009
>gb|BC096518.1| Xenopus tropicalis hypothetical protein LOC613058, mRNA (cDNA clone IMAGE:7016064), partial cds Length = 2279 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 372 gcaggggcagcagcaggggc 391
>gb|AC161371.4| Mus musculus BAC clone RP23-402N3 from chromosome 9, complete sequence Length = 203708 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 ggagaggcaggggcagcagcaggggcag 181 |||||||||||||||| |||||||||| Sbjct: 25017 ggagaggcaggggcaggggcaggggcag 24990
>gb|AC165143.3| Mus musculus BAC clone RP24-391N16 from chromosome 7, complete sequence Length = 165017 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aggagaggcaggggcagcag 172 |||||||||||||||||||| Sbjct: 17000 aggagaggcaggggcagcag 17019
>ref|XM_838094.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1010) partial mRNA Length = 2340 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 gcagcaggggcaggtgctggagct 192 |||||||| ||||||||||||||| Sbjct: 1029 gcagcaggagcaggtgctggagct 1052
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 181 ggtgctggagctgctgctcgccgcgctg 208 |||||||| ||||||| ||||||||||| Sbjct: 2203138 ggtgctggcgctgctgatcgccgcgctg 2203111
>ref|XM_742030.1| Aspergillus fumigatus Af293 rhamnogalacturonase (Afu8g00820) partial mRNA Length = 1680 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 aggtggtgctcatgtccagcgccg 113 ||||||||| |||||||||||||| Sbjct: 1000 aggtggtgcccatgtccagcgccg 977
>ref|XM_390955.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10779.1) partial mRNA Length = 1014 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 166 gcagcagcaggggcaggtgctggagctg 193 ||||||||||||||||| || ||||||| Sbjct: 1010 gcagcagcaggggcaggggcaggagctg 983
>gb|AC140235.3| Mus musculus BAC clone RP24-272D15 from chromosome 7, complete sequence Length = 185617 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 gaggtggtgctcatgtccag 108 |||||||||||||||||||| Sbjct: 210 gaggtggtgctcatgtccag 229
>gb|AC125152.5| Mus musculus BAC clone RP24-366J2 from chromosome 14, complete sequence Length = 134122 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 11351 gcaggggcagcagcaggggc 11332
>gb|AC140207.3| Mus musculus BAC clone RP24-446P10 from chromosome 18, complete sequence Length = 185316 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 ggggggcggcgggtggggga 284 |||||||||||||||||||| Sbjct: 124186 ggggggcggcgggtggggga 124205
>gb|BC035846.1| Homo sapiens paired immunoglobin-like type 2 receptor beta, mRNA (cDNA clone IMAGE:5745486), **** WARNING: chimeric clone **** Length = 2138 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 1087 gcaggggcagcagcaggggc 1068
>gb|AC124603.5| Mus musculus BAC clone RP23-52H14 from chromosome 14, complete sequence Length = 179891 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 135816 gcaggggcagcagcaggggc 135797
>gb|AC124560.4| Mus musculus BAC clone RP23-166O22 from chromosome 5, complete sequence Length = 222593 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 agaggcaggggcagcagcaggggc 179 |||||||||||||| ||||||||| Sbjct: 123704 agaggcaggggcaggagcaggggc 123727
>gb|BC040122.1| Homo sapiens paired immunoglobin-like type 2 receptor beta, mRNA (cDNA clone IMAGE:4177627), with apparent retained intron Length = 2897 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 1873 gcaggggcagcagcaggggc 1854
>gb|AC122056.4| Mus musculus BAC clone RP24-466A3 from chromosome 14, complete sequence Length = 179685 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 agaggcaggggcagcagcag 175 |||||||||||||||||||| Sbjct: 74208 agaggcaggggcagcagcag 74227
>gb|AC125038.4| Mus musculus BAC clone RP23-333P7 from chromosome 5, complete sequence Length = 198463 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 agaggcaggggcagcagcaggggc 179 |||||||||||||| ||||||||| Sbjct: 12393 agaggcaggggcaggagcaggggc 12370
>emb|CR974467.8| Pig DNA sequence from clone CH242-235B3 on chromosome 17, complete sequence Length = 158975 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 caggtgctggagctgctgct 198 |||||||||||||||||||| Sbjct: 11498 caggtgctggagctgctgct 11479
>gb|AC121995.2| Mus musculus BAC clone RP24-310M4 from 7, complete sequence Length = 126991 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gaggtggtgctcatgtccag 108 |||||||||||||||||||| Sbjct: 103553 gaggtggtgctcatgtccag 103534
>ref|XM_850082.1| PREDICTED: Canis familiaris similar to B-cell lymphoma 3-encoded protein (Bcl-3 protein) (LOC612349), mRNA Length = 1530 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 cgccgcggggggcggcgggt 278 |||||||||||||||||||| Sbjct: 337 cgccgcggggggcggcgggt 318
>gb|AC109138.10| Mus musculus chromosome 19, clone RP23-41B18, complete sequence Length = 269155 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 155 gagaggcaggggcagcagcaggggcagg 182 ||||||||||||||| ||||||||||| Sbjct: 32447 gagaggcaggggcaggggcaggggcagg 32474
>gb|DQ334091.1| Drosophila miranda CG13881 gene, partial cds Length = 963 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||||||||| |||||||||||| Sbjct: 309 ggcaggggcaggagcaggggcagg 332
>emb|AL589741.11| Human DNA sequence from clone RP11-372M18 on chromosome 1 Contains a novel gene and the 5' end of a novel gene, complete sequence Length = 159331 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 aggcaggggcagcagcaggg 177 |||||||||||||||||||| Sbjct: 156043 aggcaggggcagcagcaggg 156024
>emb|AL590039.9| Human DNA sequence from clone RP11-151F15 on chromosome 10, complete sequence Length = 77832 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 ggggggcggcgggtgggggatgga 288 |||||| ||||||||||||||||| Sbjct: 74976 gggggggggcgggtgggggatgga 74999
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 gcaggggcaggtgctggagctgct 195 ||||| |||||||||||||||||| Sbjct: 4475947 gcaggcgcaggtgctggagctgct 4475970
>gb|AC175667.3| Mus musculus BAC clone RP24-372I14 from chromosome y, complete sequence Length = 167889 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||||||||| |||||||||||| Sbjct: 46512 ggcaggggcaggagcaggggcagg 46489
>emb|AL133230.25| Human DNA sequence from clone RP4-530I15 on chromosome 20 Contains the 3' end of the PTPN1 gene for protein tyrosine phosphatase, non-receptor type 1 (EC 3.1.3.48), the C20orf175 gene for a novel protein similar to DIFF48, the RPL36P2 gene for ribosomal protein L36 pseudogene 2 and three novel genes, complete sequence Length = 111039 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 aggggcaggtgctggagctg 193 |||||||||||||||||||| Sbjct: 73377 aggggcaggtgctggagctg 73396
>emb|AL031224.1|HS336H9 Human DNA sequence from clone RP3-336H9 on chromosome 6p12.1-21.1 Contains the 5' end of the TFAP2B gene for transcription factor AP-2 beta (activating enhancer-binding protein 2 beta), the gene for a novel transcription factor AP-2 LIKE gene and three CpG islands, complete sequence Length = 131673 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 155 gagaggcaggggcagcagcaggggcagg 182 ||||||||||||||| ||||||||||| Sbjct: 20939 gagaggcaggggcaggggcaggggcagg 20912
>gb|AC123178.4| Rattus norvegicus 7 BAC CH230-20I17 (Children's Hospital Oakland Research Institute) complete sequence Length = 221236 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 155 gagaggcaggggcagcagcaggggcagg 182 ||||||||||||||| ||||||||||| Sbjct: 25159 gagaggcaggggcaggggcaggggcagg 25186
>emb|AL606805.21| Mouse DNA sequence from clone RP23-449F16 on chromosome 11 Contains the 5' end of the Lpo gene for lactoperoxidase, a novel gene, the Epx gene for eosinophil peroxidase, the Olfr462, Olfr463 and Olfr464 genes for olfactory receptors 462, 463 and 464, a novel gene, a cytochrome c oxidase subunit VIc (Cox6c) pseudogene, a ubiquitin-conjugating enzyme E2B (S. cerevisiae RAD6 homology) (Ube2b) pseudogene and the 3' end of the gene for dynein light chain 2 (6720463E02Rik), complete sequence Length = 184069 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 155 gagaggcaggggcagcagcaggggcagg 182 ||||||||||||||| ||||||||||| Sbjct: 88729 gagaggcaggggcaggggcaggggcagg 88702
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccagcgccggcaccggctgc 124 |||||||||||||||||||| Sbjct: 326321 ccagcgccggcaccggctgc 326340
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccagcgccggcaccggctgc 124 |||||||||||||||||||| Sbjct: 265319 ccagcgccggcaccggctgc 265338
>gb|BC056484.1| Mus musculus shadow of prion protein, mRNA (cDNA clone MGC:67455 IMAGE:5696462), complete cds Length = 3172 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 319 gcaggggcagcagcaggggc 338
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccagcgccggcaccggctgc 124 |||||||||||||||||||| Sbjct: 187654 ccagcgccggcaccggctgc 187673
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tgctcgccgcgctgcgcaag 214 |||||||||||||||||||| Sbjct: 1032224 tgctcgccgcgctgcgcaag 1032205
>ref|NM_183147.2| Mus musculus shadow of prion protein (Sprn), mRNA Length = 3172 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 319 gcaggggcagcagcaggggc 338
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ggacgccgacgacccggccg 260 |||||||||||||||||||| Sbjct: 268505 ggacgccgacgacccggccg 268524
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ggggcagcagcaggggcagg 182 |||||||||||||||||||| Sbjct: 25305 ggggcagcagcaggggcagg 25286
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 gctgctgctcgccgcgctgcgcaa 213 |||||||||| ||||||||||||| Sbjct: 108872 gctgctgctcaccgcgctgcgcaa 108849
>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2 Length = 178073 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ggcaggtgctggagctgctg 196 |||||||||||||||||||| Sbjct: 146903 ggcaggtgctggagctgctg 146922
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ggcaggtgctggagctgctg 196 |||||||||||||||||||| Sbjct: 31171 ggcaggtgctggagctgctg 31152
>emb|AL451019.1|NCB9I2 Neurospora crassa DNA linkage group II BAC clone B9I2 Length = 72652 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 166 gcagcagcaggggcaggtgctggagctg 193 |||| |||||||||||| |||||||||| Sbjct: 62779 gcaggagcaggggcaggagctggagctg 62806
>emb|AJ307671.1|BAC221D7 Mus musculus BAC22107 partial stk33 gene Length = 158201 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aggagaggcaggggcagcag 172 |||||||||||||||||||| Sbjct: 69820 aggagaggcaggggcagcag 69839
>emb|AJ278435.1|MMU278435 Mus musculus Ranbp7 gene, Staf gene and Wee1 gene Length = 192519 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gaggtggtgctcatgtccag 108 |||||||||||||||||||| Sbjct: 31586 gaggtggtgctcatgtccag 31567
>emb|BX296544.8| Zebrafish DNA sequence from clone DKEYP-14B8 in linkage group 21, complete sequence Length = 168838 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 152 caggagaggcaggggcagcagcaggggc 179 |||||| |||||| |||||||||||||| Sbjct: 113849 caggagcggcaggagcagcagcaggggc 113822
>emb|AJ621426.1| Mus musculus mRNA for Shadoo protein (Sprn gene) Length = 681 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 198 gcaggggcagcagcaggggc 217
>emb|AL928931.15| Mouse DNA sequence from clone RP23-419H3 on chromosome 2, complete sequence Length = 148740 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 151 ccaggagaggcaggggcagcagcaggggcagg 182 ||||||||||||| ||||| ||||||||||| Sbjct: 129956 ccaggagaggcagaggcaggggcaggggcagg 129925
>emb|AL954256.1| Pan troglodytes chromosome 22 clone PTB-129I16 map 22q22.3, complete sequence Length = 180777 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 ggcagcagcaggggcaggtgctgg 188 |||||| ||||||||||||||||| Sbjct: 176048 ggcagccgcaggggcaggtgctgg 176071
>emb|AL834336.1|HSM805391 Homo sapiens mRNA; cDNA DKFZp434O079 (from clone DKFZp434O079) Length = 1265 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 242 gcaggggcagcagcaggggc 223
>emb|AL834317.1|HSM805361 Homo sapiens mRNA; cDNA DKFZp434F086 (from clone DKFZp434F086) Length = 2694 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 1928 gcaggggcagcagcaggggc 1909
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cagatcccctgcccggcccc 399 |||||||||||||||||||| Sbjct: 1548616 cagatcccctgcccggcccc 1548597
>gb|AC084388.1| Mus musculus clone RP23-132G6, complete sequence Length = 208754 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ggcaggggcagcagcaggggcagg 182 ||||||||||| |||||||||||| Sbjct: 28656 ggcaggggcaggagcaggggcagg 28679
>gb|AC023729.5| Drosophila melanogaster X BAC RP98-39L4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182635 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gcgaggtggtgctcatgtcc 106 |||||||||||||||||||| Sbjct: 123819 gcgaggtggtgctcatgtcc 123800
>dbj|AK056412.1| Homo sapiens cDNA FLJ31850 fis, clone NT2RP7000600, highly similar to Homo sapiens activating receptor PILRbeta mRNA Length = 3535 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 2524 gcaggggcagcagcaggggc 2505
>ref|NM_132304.2| Drosophila melanogaster Zpr1 CG9060-RA (Zpr1), mRNA Length = 1811 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gcgaggtggtgctcatgtcc 106 |||||||||||||||||||| Sbjct: 255 gcgaggtggtgctcatgtcc 274
>gb|AC124338.11| Mus musculus chromosome 1, clone RP24-200D3, complete sequence Length = 165770 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 155 gagaggcaggggcagcagcaggggcagg 182 ||||||||||||||| ||||||||||| Sbjct: 145289 gagaggcaggggcaggggcaggggcagg 145316
>dbj|AK148820.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120451F23 product:importin 7, full insert sequence Length = 2873 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gaggtggtgctcatgtccag 108 |||||||||||||||||||| Sbjct: 2470 gaggtggtgctcatgtccag 2451
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 ccagtgccagcgccagcgtc 418 |||||||||||||||||||| Sbjct: 3096192 ccagtgccagcgccagcgtc 3096173
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 ccagtgccagcgccagcgtcttcg 422 ||||| |||||||||||||||||| Sbjct: 1844675 ccagttccagcgccagcgtcttcg 1844652
>gb|AC147653.5| Pan troglodytes BAC clone RP43-145M20 from chromosome 7, complete sequence Length = 192464 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 ggagaggcaggggcagcagcaggggcag 181 |||||||||||||||| |||||||||| Sbjct: 36779 ggagaggcaggggcaggggcaggggcag 36806
>gb|AY051889.1| Drosophila melanogaster LD37736 full length cDNA Length = 1823 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gcgaggtggtgctcatgtcc 106 |||||||||||||||||||| Sbjct: 255 gcgaggtggtgctcatgtcc 274
>gb|AY129335.1| Mycobacteriophage Corndog, complete genome Length = 69777 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ctgctcgccgcgctgcgcaa 213 |||||||||||||||||||| Sbjct: 62732 ctgctcgccgcgctgcgcaa 62713
>dbj|AK079903.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430110E10 product:weakly similar to RANBP7/IMPORTIN 7 [Mus musculus], full insert sequence Length = 3883 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gaggtggtgctcatgtccag 108 |||||||||||||||||||| Sbjct: 2440 gaggtggtgctcatgtccag 2421
>dbj|AK039338.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330026F02 product:unclassifiable, full insert sequence Length = 1151 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gaggtggtgctcatgtccag 108 |||||||||||||||||||| Sbjct: 364 gaggtggtgctcatgtccag 345
>dbj|AK049995.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630041J07 product:Hypothetical glycine-rich region/alanine-rich region containing protein, full insert sequence Length = 1326 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 356 gcaggggcagcagcaggggc 375
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tgctcgccgcgctgcgcaag 214 |||||||||||||||||||| Sbjct: 626011 tgctcgccgcgctgcgcaag 625992
>gb|AF350281.1|AF350281 Plectreurys tristis fibroin 1 mRNA, partial cds Length = 2740 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 160 gcaggggcagcagcaggggcaggtgctggagc 191 |||||||| | |||||| |||||||||||||| Sbjct: 797 gcaggggctggagcaggagcaggtgctggagc 828 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 160 gcaggggcagcagcaggggcaggtgctggagc 191 |||||||| | |||||| |||||||||||||| Sbjct: 41 gcaggggctggagcaggagcaggtgctggagc 72
>gb|AC067950.5| Homo sapiens BAC clone RP11-375B23 from 2, complete sequence Length = 101721 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 caggggcagcagcaggggca 180 |||||||||||||||||||| Sbjct: 82592 caggggcagcagcaggggca 82611
>gb|AF217981.1|AF217981 Homo sapiens clone PP1551 unknown mRNA Length = 2332 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 1511 gcaggggcagcagcaggggc 1492
>gb|AF162936.2|AF162936 Streptomyces coelicolor A3(2) Na/H antiporter homolog gene, partial cds; and hypothetical protein (ushY), putative sigma factor SigH anti-sigma factor (ushX), and RNA polymerase alternative sigma factor (sigH) genes, complete cds Length = 3300 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggggcagcagcaggggcagg 182 |||||||||||||||||||| Sbjct: 456 ggggcagcagcaggggcagg 475
>gb|AF459826.1| Gallus gallus breed Fayoumi MHC class I antigen gene, complete cds Length = 1189 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ctggagctgctgctcgccgc 204 |||||||||||||||||||| Sbjct: 25 ctggagctgctgctcgccgc 44
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gccgccgcggggggcggcgg 276 |||||||||||||||||||| Sbjct: 74469 gccgccgcggggggcggcgg 74488
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gccgccgcggggggcggcgg 276 |||||||||||||||||||| Sbjct: 136690 gccgccgcggggggcggcgg 136709
>gb|AF161081.1|AF161081 Homo sapiens activating receptor PILRbeta mRNA, complete cds Length = 993 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcaggggcagcagcaggggc 179 |||||||||||||||||||| Sbjct: 316 gcaggggcagcagcaggggc 297
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gagctgctgctcgccgcgct 207 |||||||||||||||||||| Sbjct: 2001097 gagctgctgctcgccgcgct 2001116
>emb|BX842600.1| Neurospora crassa DNA linkage group II BAC clone B15P20 Length = 74452 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 160 gcaggggcagcagcaggggcaggtgctggagc 191 |||||||||| |||||||||||| || ||||| Sbjct: 57021 gcaggggcaggagcaggggcaggagcgggagc 57052
>gb|AC153536.3| Mus musculus 10 BAC RP23-402F24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208392 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 155 gagaggcaggggcagcagcaggggcagg 182 ||||||||||||||| ||||||||||| Sbjct: 52496 gagaggcaggggcaggggcaggggcagg 52523
>gb|AE005060.1| Halobacterium sp. NRC-1 section 91 of 170 of the complete genome Length = 10100 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 tcgaccgcctccagggcttc 352 |||||||||||||||||||| Sbjct: 9083 tcgaccgcctccagggcttc 9064
>emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102 Length = 340000 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 ggcagcagcaggggcaggtgctgg 188 |||||| ||||||||||||||||| Sbjct: 80433 ggcagccgcaggggcaggtgctgg 80456 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,724,569 Number of Sequences: 3902068 Number of extensions: 3724569 Number of successful extensions: 110261 Number of sequences better than 10.0: 276 Number of HSP's better than 10.0 without gapping: 279 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103509 Number of HSP's gapped (non-prelim): 6745 length of query: 451 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 429 effective length of database: 17,147,199,772 effective search space: 7356148702188 effective search space used: 7356148702188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)