| Clone Name | bast58e04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550253.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2029 Score = 236 bits (119), Expect = 4e-59 Identities = 200/227 (88%) Strand = Plus / Plus Query: 161 gcggcggagtccgggggccgcgacccggtggcggcgttccggtccaaggactggggcgcc 220 |||||||||||||| || | ||| |||||||||||||||||| || |||||||||||| Sbjct: 148 gcggcggagtccggtgggcacgagccggtggcggcgttccgggggaaagactggggcgcc 207 Query: 221 agcgaggttttccgctccttcctcttcgagcagggcggcctcgacaaggttccagtgctg 280 | |||||| ||||||||||| ||||||||||| ||||| || ||||||||||| ||| || Sbjct: 208 accgaggtgttccgctcctttctcttcgagcaaggcgggcttgacaaggttccggtgttg 267 Query: 281 gatgcatcaaacctcggactgatcaaacccaacaccctagttcggttccgggggatggtt 340 |||| |||||| || ||| ||||||| || || ||||| ||||||||||||||||||||| Sbjct: 268 gatgaatcaaatcttggattgatcaagccgaatacccttgttcggttccgggggatggtt 327 Query: 341 caggacatgctcgggaacgagttctacgccggtgctttcaaggatgg 387 |||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 328 caggacatgctcgggaacgagttctatgttggtgctttcaaggatgg 374 Score = 127 bits (64), Expect = 3e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 76 gaggatggtgggcccgcagtacgacctcgtcggcaaccccctgggcgcggtgcgcgccac 135 |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| |||| Sbjct: 75 gaggatggtggggccgcagtacgacctcgtcgggaaccccctgggggcggtgcgctccac 134 Query: 136 cttcgagagggcggcggcgg 155 |||||||||||||||||||| Sbjct: 135 cttcgagagggcggcggcgg 154
>dbj|AK099378.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067O18, full insert sequence Length = 2029 Score = 236 bits (119), Expect = 4e-59 Identities = 200/227 (88%) Strand = Plus / Plus Query: 161 gcggcggagtccgggggccgcgacccggtggcggcgttccggtccaaggactggggcgcc 220 |||||||||||||| || | ||| |||||||||||||||||| || |||||||||||| Sbjct: 148 gcggcggagtccggtgggcacgagccggtggcggcgttccgggggaaagactggggcgcc 207 Query: 221 agcgaggttttccgctccttcctcttcgagcagggcggcctcgacaaggttccagtgctg 280 | |||||| ||||||||||| ||||||||||| ||||| || ||||||||||| ||| || Sbjct: 208 accgaggtgttccgctcctttctcttcgagcaaggcgggcttgacaaggttccggtgttg 267 Query: 281 gatgcatcaaacctcggactgatcaaacccaacaccctagttcggttccgggggatggtt 340 |||| |||||| || ||| ||||||| || || ||||| ||||||||||||||||||||| Sbjct: 268 gatgaatcaaatcttggattgatcaagccgaatacccttgttcggttccgggggatggtt 327 Query: 341 caggacatgctcgggaacgagttctacgccggtgctttcaaggatgg 387 |||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 328 caggacatgctcgggaacgagttctatgttggtgctttcaaggatgg 374 Score = 127 bits (64), Expect = 3e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 76 gaggatggtgggcccgcagtacgacctcgtcggcaaccccctgggcgcggtgcgcgccac 135 |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| |||| Sbjct: 75 gaggatggtggggccgcagtacgacctcgtcgggaaccccctgggggcggtgcgctccac 134 Query: 136 cttcgagagggcggcggcgg 155 |||||||||||||||||||| Sbjct: 135 cttcgagagggcggcggcgg 154
>dbj|AK073783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068H14, full insert sequence Length = 2029 Score = 236 bits (119), Expect = 4e-59 Identities = 200/227 (88%) Strand = Plus / Plus Query: 161 gcggcggagtccgggggccgcgacccggtggcggcgttccggtccaaggactggggcgcc 220 |||||||||||||| || | ||| |||||||||||||||||| || |||||||||||| Sbjct: 148 gcggcggagtccggtgggcacgagccggtggcggcgttccgggggaaagactggggcgcc 207 Query: 221 agcgaggttttccgctccttcctcttcgagcagggcggcctcgacaaggttccagtgctg 280 | |||||| ||||||||||| ||||||||||| ||||| || ||||||||||| ||| || Sbjct: 208 accgaggtgttccgctcctttctcttcgagcaaggcgggcttgacaaggttccggtgttg 267 Query: 281 gatgcatcaaacctcggactgatcaaacccaacaccctagttcggttccgggggatggtt 340 |||| |||||| || ||| ||||||| || || ||||| ||||||||||||||||||||| Sbjct: 268 gatgaatcaaatcttggattgatcaagccgaatacccttgttcggttccgggggatggtt 327 Query: 341 caggacatgctcgggaacgagttctacgccggtgctttcaaggatgg 387 |||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 328 caggacatgctcgggaacgagttctatgttggtgctttcaaggatgg 374 Score = 127 bits (64), Expect = 3e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 76 gaggatggtgggcccgcagtacgacctcgtcggcaaccccctgggcgcggtgcgcgccac 135 |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| |||| Sbjct: 75 gaggatggtggggccgcagtacgacctcgtcgggaaccccctgggggcggtgcgctccac 134 Query: 136 cttcgagagggcggcggcgg 155 |||||||||||||||||||| Sbjct: 135 cttcgagagggcggcggcgg 154
>gb|AY109319.1| Zea mays PCO101218 mRNA sequence Length = 579 Score = 194 bits (98), Expect = 1e-46 Identities = 257/310 (82%) Strand = Plus / Plus Query: 79 gatggtgggcccgcagtacgacctcgtcggcaaccccctgggcgcggtgcgcgccacctt 138 ||||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||||| Sbjct: 77 gatggtggggctgcagtacgatctcgtcgggaacccattgggcgcggtgcgcgccacctt 136 Query: 139 cgagagggcggcggcggccgccgcggcggagtccgggggccgcgacccggtggcggcgtt 198 ||||||| |||| || ||||| || ||| |||| || || ||||| ||||||||||| Sbjct: 137 cgagaggacggccgccgccgctgcagcgcagtctggaggagctgaccctgtggcggcgtt 196 Query: 199 ccggtccaaggactggggcgccagcgaggttttccgctccttcctcttcgagcagggcgg 258 ||| ||| |||||||||||| | || | ||||||||||||||||||||||| | ||| Sbjct: 197 ccgtggcaaagactggggcgccggtgacctcttccgctccttcctcttcgagcaagacgg 256 Query: 259 cctcgacaaggttccagtgctggatgcatcaaacctcggactgatcaaacccaacaccct 318 || | ||||||||| ||| ||||| | ||||| || ||| |||||||||| |||||||| Sbjct: 257 tcttggcaaggttccggtgttggattcgtcaaatcttggattgatcaaaccgaacaccct 316 Query: 319 agttcggttccgggggatggttcaggacatgctcgggaacgagttctacgccggtgcttt 378 || |||| ||||| ||||||||||| ||||| ||||| |||| |||| |||||||| Sbjct: 317 ggtccggtatcggggaatggttcaggatatgcttgggaatgagtactacattggtgcttt 376 Query: 379 caaggatggg 388 |||||||||| Sbjct: 377 caaggatggg 386
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 129 bits (65), Expect = 7e-27 Identities = 104/117 (88%) Strand = Plus / Minus Query: 267 aggttccagtgctggatgcatcaaacctcggactgatcaaacccaacaccctagttcggt 326 ||||||| ||| |||||| |||||| || ||| ||||||| || || ||||| ||||||| Sbjct: 3427915 aggttccggtgttggatgaatcaaatcttggattgatcaagccgaatacccttgttcggt 3427856 Query: 327 tccgggggatggttcaggacatgctcgggaacgagttctacgccggtgctttcaagg 383 |||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 3427855 tccgggggatggttcaggacatgctcgggaacgagttctatgttggtgctttcaagg 3427799 Score = 127 bits (64), Expect = 3e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 76 gaggatggtgggcccgcagtacgacctcgtcggcaaccccctgggcgcggtgcgcgccac 135 |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| |||| Sbjct: 3428500 gaggatggtggggccgcagtacgacctcgtcgggaaccccctgggggcggtgcgctccac 3428441 Query: 136 cttcgagagggcggcggcgg 155 |||||||||||||||||||| Sbjct: 3428440 cttcgagagggcggcggcgg 3428421 Score = 107 bits (54), Expect = 3e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 161 gcggcggagtccgggggccgcgacccggtggcggcgttccggtccaaggactggggcgcc 220 |||||||||||||| || | ||| |||||||||||||||||| || |||||||||||| Sbjct: 3428427 gcggcggagtccggtgggcacgagccggtggcggcgttccgggggaaagactggggcgcc 3428368 Query: 221 agcgaggttttccgctccttcctcttcgagcagggcggcctcgacaaggt 270 | |||||| ||||||||||| ||||||||||| ||||| || |||||||| Sbjct: 3428367 accgaggtgttccgctcctttctcttcgagcaaggcgggcttgacaaggt 3428318 Score = 46.1 bits (23), Expect = 0.084 Identities = 26/27 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggagtc 171 ||||||||| ||||||||||||||||| Sbjct: 31306030 ggcggcggccgccgccgcggcggagtc 31306056 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcggcggccgccgcggcggag 169 ||||||||||||||||||||| Sbjct: 12089680 gcggcggccgccgcggcggag 12089660 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ggcggcggccgccgcggcgg 167 |||||||||||||||||||| Sbjct: 22674066 ggcggcggccgccgcggcgg 22674047 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 gggcggcggcggccgccgcggcgg 167 ||||||||||||| |||||||||| Sbjct: 16310337 gggcggcggcggcggccgcggcgg 16310314 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cggcggcggccgccgcggcg 166 |||||||||||||||||||| Sbjct: 7229984 cggcggcggccgccgcggcg 7229965 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 1775875 ggcggcggcggcggcggcggcggagtcc 1775848
>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0701D05 Length = 172161 Score = 129 bits (65), Expect = 7e-27 Identities = 104/117 (88%) Strand = Plus / Minus Query: 267 aggttccagtgctggatgcatcaaacctcggactgatcaaacccaacaccctagttcggt 326 ||||||| ||| |||||| |||||| || ||| ||||||| || || ||||| ||||||| Sbjct: 106285 aggttccggtgttggatgaatcaaatcttggattgatcaagccgaatacccttgttcggt 106226 Query: 327 tccgggggatggttcaggacatgctcgggaacgagttctacgccggtgctttcaagg 383 |||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 106225 tccgggggatggttcaggacatgctcgggaacgagttctatgttggtgctttcaagg 106169 Score = 127 bits (64), Expect = 3e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 76 gaggatggtgggcccgcagtacgacctcgtcggcaaccccctgggcgcggtgcgcgccac 135 |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| |||| Sbjct: 106870 gaggatggtggggccgcagtacgacctcgtcgggaaccccctgggggcggtgcgctccac 106811 Query: 136 cttcgagagggcggcggcgg 155 |||||||||||||||||||| Sbjct: 106810 cttcgagagggcggcggcgg 106791 Score = 107 bits (54), Expect = 3e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 161 gcggcggagtccgggggccgcgacccggtggcggcgttccggtccaaggactggggcgcc 220 |||||||||||||| || | ||| |||||||||||||||||| || |||||||||||| Sbjct: 106797 gcggcggagtccggtgggcacgagccggtggcggcgttccgggggaaagactggggcgcc 106738 Query: 221 agcgaggttttccgctccttcctcttcgagcagggcggcctcgacaaggt 270 | |||||| ||||||||||| ||||||||||| ||||| || |||||||| Sbjct: 106737 accgaggtgttccgctcctttctcttcgagcaaggcgggcttgacaaggt 106688
>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028E10 Length = 140791 Score = 129 bits (65), Expect = 7e-27 Identities = 104/117 (88%) Strand = Plus / Minus Query: 267 aggttccagtgctggatgcatcaaacctcggactgatcaaacccaacaccctagttcggt 326 ||||||| ||| |||||| |||||| || ||| ||||||| || || ||||| ||||||| Sbjct: 14675 aggttccggtgttggatgaatcaaatcttggattgatcaagccgaatacccttgttcggt 14616 Query: 327 tccgggggatggttcaggacatgctcgggaacgagttctacgccggtgctttcaagg 383 |||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 14615 tccgggggatggttcaggacatgctcgggaacgagttctatgttggtgctttcaagg 14559 Score = 127 bits (64), Expect = 3e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 76 gaggatggtgggcccgcagtacgacctcgtcggcaaccccctgggcgcggtgcgcgccac 135 |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| |||| Sbjct: 15260 gaggatggtggggccgcagtacgacctcgtcgggaaccccctgggggcggtgcgctccac 15201 Query: 136 cttcgagagggcggcggcgg 155 |||||||||||||||||||| Sbjct: 15200 cttcgagagggcggcggcgg 15181 Score = 107 bits (54), Expect = 3e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 161 gcggcggagtccgggggccgcgacccggtggcggcgttccggtccaaggactggggcgcc 220 |||||||||||||| || | ||| |||||||||||||||||| || |||||||||||| Sbjct: 15187 gcggcggagtccggtgggcacgagccggtggcggcgttccgggggaaagactggggcgcc 15128 Query: 221 agcgaggttttccgctccttcctcttcgagcagggcggcctcgacaaggt 270 | |||||| ||||||||||| ||||||||||| ||||| || |||||||| Sbjct: 15127 accgaggtgttccgctcctttctcttcgagcaaggcgggcttgacaaggt 15078
>ref|NM_129617.3| Arabidopsis thaliana unknown protein AT2G40550 mRNA, complete cds Length = 1963 Score = 50.1 bits (25), Expect = 0.005 Identities = 67/81 (82%) Strand = Plus / Plus Query: 306 aacccaacaccctagttcggttccgggggatggttcaggacatgctcgggaacgagttct 365 ||||||| || || |||||||| || || ||| | ||||||||||| ||||| || |||| Sbjct: 297 aacccaagactcttgttcggtttcgtggaatgatacaggacatgcttgggaatgaattct 356 Query: 366 acgccggtgctttcaaggatg 386 | || ||||||| |||||||| Sbjct: 357 atgctggtgcttacaaggatg 377
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 142 gagggcggcggcggccgccgcggcg 166 ||||||||||||||||||||||||| Sbjct: 48251 gagggcggcggcggccgccgcggcg 48227
>emb|BX819458.1|CNS0A8V5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB7ZB09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1888 Score = 50.1 bits (25), Expect = 0.005 Identities = 67/81 (82%) Strand = Plus / Plus Query: 306 aacccaacaccctagttcggttccgggggatggttcaggacatgctcgggaacgagttct 365 ||||||| || || |||||||| || || ||| | ||||||||||| ||||| || |||| Sbjct: 276 aacccaagactcttgttcggtttcgtggaatgatacaggacatgcttgggaatgaattct 335 Query: 366 acgccggtgctttcaaggatg 386 | || ||||||| |||||||| Sbjct: 336 atgctggtgcttacaaggatg 356
>gb|BT022032.1| Arabidopsis thaliana At2g40550 gene, complete cds Length = 1790 Score = 50.1 bits (25), Expect = 0.005 Identities = 67/81 (82%) Strand = Plus / Plus Query: 306 aacccaacaccctagttcggttccgggggatggttcaggacatgctcgggaacgagttct 365 ||||||| || || |||||||| || || ||| | ||||||||||| ||||| || |||| Sbjct: 221 aacccaagactcttgttcggtttcgtggaatgatacaggacatgcttgggaatgaattct 280 Query: 366 acgccggtgctttcaaggatg 386 | || ||||||| |||||||| Sbjct: 281 atgctggtgcttacaaggatg 301
>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09, complete sequence Length = 148740 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||||||||||||||| Sbjct: 40158 gcggcggcggccgccgcggcggag 40181
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||||||||||||||| Sbjct: 23214752 gcggcggcggccgccgcggcggag 23214775 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 8861069 ggcggcggcggccgccgcggc 8861089 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gggcggcggcggccgccgcg 163 |||||||||||||||||||| Sbjct: 24093517 gggcggcggcggccgccgcg 24093536
>ref|XM_483639.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1825 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcgg 167 ||||||||||||||||||||||| Sbjct: 203 ggcggcggcggccgccgcggcgg 225
>ref|NM_191204.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 960 Score = 46.1 bits (23), Expect = 0.084 Identities = 26/27 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggagtc 171 ||||||||| ||||||||||||||||| Sbjct: 114 ggcggcggccgccgccgcggcggagtc 88
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcgg 167 ||||||||||||||||||||||| Sbjct: 2033329 ggcggcggcggccgccgcggcgg 2033351 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcg 166 |||||||||||||||||||||| Sbjct: 2380915 ggcggcggcggccgccgcggcg 2380894 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 4702009 ggcggcggcggccgccgcggc 4701989 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggcg 166 ||||||||||||||||||||| Sbjct: 3872461 gcggcggcggccgccgcggcg 3872441
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcgg 167 ||||||||||||||||||||||| Sbjct: 27390908 ggcggcggcggccgccgcggcgg 27390930 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcgg 167 ||||||||||||||||||||||| Sbjct: 23347016 ggcggcggcggccgccgcggcgg 23347038 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||||||||| |||||| Sbjct: 15220405 ggcggcggcggccgccgccgcggag 15220429
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 46.1 bits (23), Expect = 0.084 Identities = 26/27 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggagtc 171 ||||||||| ||||||||||||||||| Sbjct: 60313 ggcggcggccgccgccgcggcggagtc 60339
>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0451G12 Length = 142182 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcgg 167 ||||||||||||||||||||||| Sbjct: 28853 ggcggcggcggccgccgcggcgg 28875
>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0544G09 Length = 137481 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcgg 167 ||||||||||||||||||||||| Sbjct: 17703 ggcggcggcggccgccgcggcgg 17725
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1323_A06 Length = 95665 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcgg 167 ||||||||||||||||||||||| Sbjct: 92435 ggcggcggcggccgccgcggcgg 92457
>dbj|AK120698.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170L18, full insert sequence Length = 1825 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcgg 167 ||||||||||||||||||||||| Sbjct: 203 ggcggcggcggccgccgcggcgg 225
>ref|NM_197755.1| Oryza sativa (japonica cultivar-group) putative lipase (OSJNBb0089A17.13), mRNA Length = 1605 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcg 166 |||||||||||||||||||||| Sbjct: 75 ggcggcggcggccgccgcggcg 96
>ref|NM_185527.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2931 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcg 166 |||||||||||||||||||||| Sbjct: 30 ggcggcggcggccgccgcggcg 9
>ref|NM_008242.1| Mus musculus forkhead box D1 (Foxd1), mRNA Length = 2437 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 142 gagggcggcggcggccgccgcggcgg 167 |||||||||||||||||| ||||||| Sbjct: 474 gagggcggcggcggccgcggcggcgg 499
>gb|AC121839.3| Mus musculus BAC clone RP24-76E2 from chromosome 13, complete sequence Length = 182835 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 142 gagggcggcggcggccgccgcggcgg 167 |||||||||||||||||| ||||||| Sbjct: 76533 gagggcggcggcggccgcggcggcgg 76558
>ref|XM_784308.1| PREDICTED: Strongylocentrotus purpuratus similar to CG4713-PA (LOC584450), partial mRNA Length = 2142 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 cttcctcttcgagcagggcggc 259 |||||||||||||||||||||| Sbjct: 118 cttcctcttcgagcagggcggc 97
>gb|AC002336.3| Arabidopsis thaliana chromosome 2 clone T2P4 map CIC10A06, complete sequence Length = 84675 Score = 44.1 bits (22), Expect = 0.33 Identities = 64/78 (82%) Strand = Plus / Minus Query: 306 aacccaacaccctagttcggttccgggggatggttcaggacatgctcgggaacgagttct 365 ||||||| || || |||||||| || || ||| | ||||||||||| ||||| || |||| Sbjct: 27880 aacccaagactcttgttcggtttcgtggaatgatacaggacatgcttgggaatgaattct 27821 Query: 366 acgccggtgctttcaagg 383 | || ||||||| ||||| Sbjct: 27820 atgctggtgcttacaagg 27803
>dbj|AK142034.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230009L10 product:forkhead box D1, full insert sequence Length = 2839 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 142 gagggcggcggcggccgccgcggcgg 167 |||||||||||||||||| ||||||| Sbjct: 488 gagggcggcggcggccgcggcggcgg 513
>dbj|AK164408.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230010K09 product:forkhead box D1, full insert sequence Length = 2461 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 142 gagggcggcggcggccgccgcggcgg 167 |||||||||||||||||| ||||||| Sbjct: 488 gagggcggcggcggccgcggcggcgg 513
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcg 166 |||||||||||||||||||||| Sbjct: 93187 ggcggcggcggccgccgcggcg 93208
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcg 166 |||||||||||||||||||||| Sbjct: 21661283 ggcggcggcggccgccgcggcg 21661304
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcg 166 |||||||||||||||||||||| Sbjct: 29249112 ggcggcggcggccgccgcggcg 29249133 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gagggcggcggcggccgccg 161 |||||||||||||||||||| Sbjct: 20736642 gagggcggcggcggccgccg 20736623 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcgga 168 ||||||||||||||| |||||||| Sbjct: 10361388 ggcggcggcggccgcggcggcgga 10361411
>gb|DQ004688.1| Oryza sativa (indica cultivar-group) putative LON3 protease mRNA, complete cds Length = 3133 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcg 166 |||||||||||||||||||||| Sbjct: 153 ggcggcggcggccgccgcggcg 132
>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0597G07 Length = 152928 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcg 166 |||||||||||||||||||||| Sbjct: 37801 ggcggcggcggccgccgcggcg 37822
>dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1165_F02 Length = 125993 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcg 166 |||||||||||||||||||||| Sbjct: 89186 ggcggcggcggccgccgcggcg 89207
>emb|AJ224970.1|SSI224970 Spermatozopsis similis mRNA for 90 kD basal apparatus-protein Length = 2767 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcg 166 |||||||||||||||||||||| Sbjct: 1784 ggcggcggcggccgccgcggcg 1805
>gb|L38607.1|MUSBF2TF Mus musculus (clones 1 and 5) transcription factor (BF-2) mRNA, complete cds Length = 2437 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 142 gagggcggcggcggccgccgcggcgg 167 |||||||||||||||||| ||||||| Sbjct: 474 gagggcggcggcggccgcggcggcgg 499
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcg 166 |||||||||||||||||||||| Sbjct: 21672946 ggcggcggcggccgccgcggcg 21672967
>gb|BC052024.1| Mus musculus SRY-box containing gene 3, mRNA (cDNA clone IMAGE:6403743), partial cds Length = 2083 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||| |||||||||||| Sbjct: 1047 ggcggcggcggcggccgcggcggag 1023
>ref|XM_512916.1| PREDICTED: Pan troglodytes similar to zinc finger protein 111 (LOC456308), mRNA Length = 2880 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 139 cgagagggcggcggcggccgccgcggcgg 167 ||||| ||||||||||||||| ||||||| Sbjct: 1209 cgagaaggcggcggcggccgcggcggcgg 1237
>ref|XM_509640.1| PREDICTED: Pan troglodytes similar to Forkhead box protein O1A (Forkhead in rhabdomyosarcoma) (LOC452551), mRNA Length = 1365 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 915 ggcggcggcggccgccgcggc 935
>ref|XM_481753.1| Oryza sativa (japonica cultivar-group), mRNA Length = 904 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||||||||| |||||| Sbjct: 339 ggcggcggcggccgccgccgcggag 363
>ref|NM_001030941.1| Gallus gallus staufen, RNA binding protein, homolog 2 (Drosophila) (STAU2), mRNA Length = 2379 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 cggcggcggccgccgcggcgg 167 ||||||||||||||||||||| Sbjct: 7 cggcggcggccgccgcggcgg 27
>ref|NM_183761.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1857 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcggcggccgccgcggcggag 169 ||||||||||||||||||||| Sbjct: 277 gcggcggccgccgcggcggag 257
>ref|XM_469421.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2667 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 65 ggcggcggcggccgccgcggc 45
>ref|XM_472792.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3411 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||| |||||||||||||||||| Sbjct: 213 ggcggcagcggccgccgcggcggag 189
>gb|BT018316.1| Zea mays clone EL01T0207F07.c mRNA sequence Length = 1440 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 97 ggcggcggcggccgccgcggc 77
>gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1037_G10, complete sequence Length = 181130 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 72994 ggcggcggcggccgccgcggc 73014
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 104841 ggcggcggcggccgccgcggc 104821
>gb|AY152809.1| Chlamydomonas reinhardtii 38 kDa RNA-binding protein (RB38) gene, complete cds; nuclear gene for chloroplast product Length = 4565 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 142 gagggcggcggcggccgccgcggcg 166 ||||||||||| ||||||||||||| Sbjct: 2106 gagggcggcggtggccgccgcggcg 2130
>gb|AY124882.1| Chlamydomonas reinhardtii RNA-binding protein RB38 (RB38) mRNA, complete cds; nuclear gene for chloroplast product Length = 2013 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 142 gagggcggcggcggccgccgcggcg 166 ||||||||||| ||||||||||||| Sbjct: 709 gagggcggcggtggccgccgcggcg 733
>ref|XM_870462.1| PREDICTED: Bos taurus similar to SOX-1 protein (LOC618135), mRNA Length = 1110 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 561 ggcggcggcggccgccgcggc 581
>ref|NM_009237.1| Mus musculus SRY-box containing gene 3 (Sox3), mRNA Length = 1128 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||| |||||||||||| Sbjct: 825 ggcggcggcggcggccgcggcggag 801
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 27860711 ggcggcggcggccgccgcggc 27860691 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 ||||||||||||||| ||||||||| Sbjct: 2664040 ggcggcggcggccgcggcggcggag 2664016 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gggcggcggcggccgccgcg 163 |||||||||||||||||||| Sbjct: 35026244 gggcggcggcggccgccgcg 35026225 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gggcggcggcggccgccgcg 163 |||||||||||||||||||| Sbjct: 22527879 gggcggcggcggccgccgcg 22527860
>gb|BC063061.1| Mus musculus SRY-box containing gene 3, mRNA (cDNA clone IMAGE:5717161), partial cds Length = 2077 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||| |||||||||||| Sbjct: 1044 ggcggcggcggcggccgcggcggag 1020
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcg 166 ||||||||||||||||||||| Sbjct: 3826251 gcggcggcggccgccgcggcg 3826271
>ref|NM_002015.2| Homo sapiens forkhead box O1A (rhabdomyosarcoma) (FOXO1A), mRNA Length = 5723 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 667 ggcggcggcggccgccgcggc 687
>emb|AL355132.19| Human DNA sequence from clone RP11-181D10 on chromosome 13 Contains a ring finger protein 12 (RNF12) pseudogene, the 5' end of the FOXO1A gene for forkhead box O1A (rhabdomyosarcoma), the 3' end of the MRPS31 gene for mitochondrial ribosomal protein S31 and a CpG island, complete sequence Length = 151261 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 60608 ggcggcggcggccgccgcggc 60588
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0096I10, complete sequence Length = 171946 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||| |||||||||||| Sbjct: 12152 ggcggcggcggcggccgcggcggag 12176
>gb|BT008921.1| Triticum aestivum clone wyr1c.pk002.o12:fis, full insert mRNA sequence Length = 1348 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 gggcggcggcggccgccgcgg 164 ||||||||||||||||||||| Sbjct: 125 gggcggcggcggccgccgcgg 105
>emb|X94125.1|MMSOX3 M.musculus SOX3 gene Length = 1150 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||| |||||||||||| Sbjct: 847 ggcggcggcggcggccgcggcggag 823
>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete sequence Length = 139971 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcg 166 ||||||||||||||||||||| Sbjct: 95220 gcggcggcggccgccgcggcg 95240
>gb|BT007455.1| Homo sapiens forkhead box O1A (rhabdomyosarcoma) mRNA, complete cds Length = 1968 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 282 ggcggcggcggccgccgcggc 302
>emb|AJ719886.1| Gallus gallus mRNA for hypothetical protein, clone 7n10 Length = 2379 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 cggcggcggccgccgcggcgg 167 ||||||||||||||||||||| Sbjct: 7 cggcggcggccgccgcggcgg 27
>gb|BC070065.1| Homo sapiens forkhead box O1A (rhabdomyosarcoma), mRNA (cDNA clone IMAGE:30345006), partial cds Length = 2482 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 658 ggcggcggcggccgccgcggc 678
>gb|BC021981.2| Homo sapiens forkhead box O1A (rhabdomyosarcoma), mRNA (cDNA clone MGC:1750 IMAGE:2959021), complete cds Length = 2413 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 595 ggcggcggcggccgccgcggc 615
>gb|AC008735.9| Homo sapiens chromosome 19 clone CTD-2537I9, complete sequence Length = 223879 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 139 cgagagggcggcggcggccgccgcggcgg 167 ||||| ||||||||||||||| ||||||| Sbjct: 61220 cgagaaggcggcggcggccgcggcggcgg 61192
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 95211 ggcggcggcggccgccgcggc 95191
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 34662 ggcggcggcggccgccgcggc 34682
>tpg|BK000727.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M129, complete sequence Length = 1039 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcg 166 ||||||||||||||||||||| Sbjct: 554 gcggcggcggccgccgcggcg 574
>dbj|AK133928.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730529N19 product:similar to RNA-binding protein LIN-28 (Fragment) [Xenopus laevis], full insert sequence Length = 1383 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 agggcggcggcggccgccgcg 163 ||||||||||||||||||||| Sbjct: 115 agggcggcggcggccgccgcg 95
>ref|XM_371197.3| PREDICTED: Homo sapiens similar to zinc finger protein 91 (LOC388565), mRNA Length = 2409 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 139 cgagagggcggcggcggccgccgcggcgg 167 ||||| ||||||||||||||| ||||||| Sbjct: 867 cgagaaggcggcggcggccgcggcggcgg 895
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 143 agggcggcggcggccgccgcggcgg 167 |||||||||||||||||||| |||| Sbjct: 504138 agggcggcggcggccgccgccgcgg 504162 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 cggcggcggccgccgcggcg 166 |||||||||||||||||||| Sbjct: 556194 cggcggcggccgccgcggcg 556213
>gb|AY857473.1| Suberites domuncula S15a mRNA, complete cds Length = 393 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 catcaaacctcggactgatca 305 ||||||||||||||||||||| Sbjct: 241 catcaaacctcggactgatca 221
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggag 169 ||||||||||||||| ||||||||| Sbjct: 6054 ggcggcggcggccgcggcggcggag 6078
>gb|AF434675.1| Mus musculus transcription factor SOX3 (Sox3) gene, complete cds Length = 18632 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||| |||||||||||| Sbjct: 6160 ggcggcggcggcggccgcggcggag 6136
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggcg 166 ||||||||||||||||||||| Sbjct: 2264069 gcggcggcggccgccgcggcg 2264049
>gb|BC096018.1| Mus musculus SRY-box containing gene 3, mRNA (cDNA clone IMAGE:6829907), partial cds Length = 2047 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||| |||||||||||| Sbjct: 1008 ggcggcggcggcggccgcggcggag 984
>gb|AF322139.1|AF322139 Sorghastrum nutans teosinte branched1 protein (tb1) gene, partial cds Length = 1083 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 138 tcgagagggcggcggcggccgccgcggcg 166 |||||||||||| ||| |||||||||||| Sbjct: 350 tcgagagggcggtggccgccgccgcggcg 378
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||| |||||||||||||||||| Sbjct: 23259671 ggcggcagcggccgccgcggcggag 23259647 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcg 166 ||||||||||||||||||||| Sbjct: 95220 gcggcggcggccgccgcggcg 95240 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tcctcttcgagcagggcggc 259 |||||||||||||||||||| Sbjct: 34487510 tcctcttcgagcagggcggc 34487491
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||| |||||||||||| Sbjct: 24396837 ggcggcggcggcggccgcggcggag 24396813
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 gagggcggcggcggccgccgcggcg 166 ||||||||||||||| ||||||||| Sbjct: 20199742 gagggcggcggcggcggccgcggcg 20199718
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 gcggcggccgccgcggcggag 169 ||||||||||||||||||||| Sbjct: 27491762 gcggcggccgccgcggcggag 27491782 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcggcggccgccgcggcggag 169 ||||||||||||||||||||| Sbjct: 24098852 gcggcggccgccgcggcggag 24098832 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||||||||||| |||| Sbjct: 14242133 ggcggcggcggccgccgcggaggag 14242109
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 27952035 ggcggcggcggccgccgcggc 27952015 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 ||||||||||||||| ||||||||| Sbjct: 2664150 ggcggcggcggccgcggcggcggag 2664126 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gggcggcggcggccgccgcg 163 |||||||||||||||||||| Sbjct: 35116316 gggcggcggcggccgccgcg 35116297 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gggcggcggcggccgccgcg 163 |||||||||||||||||||| Sbjct: 22520908 gggcggcggcggccgccgcg 22520889
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 gggcggcggcggccgccgcgg 164 ||||||||||||||||||||| Sbjct: 4257944 gggcggcggcggccgccgcgg 4257924 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 ggggccgcgacccggtggcggcgt 197 ||||||||||| |||||||||||| Sbjct: 3564520 ggggccgcgacgcggtggcggcgt 3564543 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agggcggcggcggccgccgc 162 |||||||||||||||||||| Sbjct: 3330864 agggcggcggcggccgccgc 3330883 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcgga 168 |||| ||||||||||||||||||| Sbjct: 2696975 ggcgccggcggccgccgcggcgga 2696952
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 ||||||||||||||| ||||||||| Sbjct: 8959 ggcggcggcggccgcggcggcggag 8935
>gb|AF283668.1|AF283668 Oryza sativa subsp. indica serine/threonine protein phosphatase PP2A-5 catalytic subunit (PP2A) gene, complete cds Length = 5618 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 ||||||||||||||| ||||||||| Sbjct: 5578 ggcggcggcggccgcggcggcggag 5554
>dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0062G05 Length = 152802 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||||||||| |||||| Sbjct: 6036 ggcggcggcggccgccgccgcggag 6060
>dbj|AP004574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702G08 Length = 144596 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||||||||| |||||| Sbjct: 68230 ggcggcggcggccgccgccgcggag 68254
>dbj|AB108674.1| Mus musculus Sox3 mRNA for transcriptional factor SOX3, complete cds Length = 1128 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||| |||||||||||| Sbjct: 825 ggcggcggcggcggccgcggcggag 801
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 gcggcggccgccgcggcggag 169 ||||||||||||||||||||| Sbjct: 61320 gcggcggccgccgcggcggag 61340
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 gcggcggccgccgcggcggag 169 ||||||||||||||||||||| Sbjct: 110831 gcggcggccgccgcggcggag 110851
>dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1153F04 Length = 158174 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcggcggccgccgcggcggag 169 ||||||||||||||||||||| Sbjct: 56620 gcggcggccgccgcggcggag 56600
>dbj|AP003921.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028G04 Length = 159761 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcggcggccgccgcggcggag 169 ||||||||||||||||||||| Sbjct: 135344 gcggcggccgccgcggcggag 135324
>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0047P18 Length = 169128 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 gagggcggcggcggccgccgcggcg 166 ||||||||||||||| ||||||||| Sbjct: 93242 gagggcggcggcggcggccgcggcg 93218
>dbj|AP004992.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0022O02 Length = 176625 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||||||||||| |||| Sbjct: 85597 ggcggcggcggccgccgcggaggag 85573
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcggcggccgccgcggcggag 169 ||||||||||||||||||||| Sbjct: 32310 gcggcggccgccgcggcggag 32290
>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0429G06 Length = 158321 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcggcggccgccgcggcggag 169 ||||||||||||||||||||| Sbjct: 108545 gcggcggccgccgcggcggag 108525
>gb|AC153847.7| Mus musculus 10 BAC RP23-286J11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187753 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 agggcggcggcggccgccgcg 163 ||||||||||||||||||||| Sbjct: 103465 agggcggcggcggccgccgcg 103445
>gb|AY890174.1| Synthetic construct Homo sapiens clone FLH015809.01X forkhead box O1A (FOXO1A) mRNA, complete cds Length = 1968 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 282 ggcggcggcggccgccgcggc 302
>gb|AY890173.1| Synthetic construct Homo sapiens clone FLH015808.01X forkhead box O1A (FOXO1A) mRNA, complete cds Length = 1968 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 282 ggcggcggcggccgccgcggc 302
>dbj|AK109191.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-B04, full insert sequence Length = 904 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||||||||| |||||| Sbjct: 339 ggcggcggcggccgccgccgcggag 363
>gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete sequence Length = 52591 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 cggcggcggccgccgcggcgg 167 ||||||||||||||||||||| Sbjct: 28736 cggcggcggccgccgcggcgg 28716 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggc 165 |||||||||||||||||||| Sbjct: 26083 gcggcggcggccgccgcggc 26064
>dbj|AK066971.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089C22, full insert sequence Length = 4127 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 133 ggcggcggcggccgccgcggc 113
>gb|AY104319.1| Zea mays PCO131533 mRNA sequence Length = 1619 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggcg 166 ||||||||||||||||||||| Sbjct: 250 gcggcggcggccgccgcggcg 230
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcg 166 ||||||||||||||||||||| Sbjct: 22765 gcggcggcggccgccgcggcg 22785
>gb|AF032885.1|AF032885 Homo sapiens forkhead protein (FKHR) mRNA, complete cds Length = 5723 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 667 ggcggcggcggccgccgcggc 687
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||| |||||||||||| Sbjct: 24708506 ggcggcggcggcggccgcggcggag 24708482
>emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0048E02, complete sequence Length = 121337 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||| |||||||||||||||||| Sbjct: 97824 ggcggcagcggccgccgcggcggag 97800
>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06, complete sequence Length = 145517 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcg 166 ||||||||||||||||||||| Sbjct: 26469 gcggcggcggccgccgcggcg 26489
>emb|AL807233.10| Mouse DNA sequence from clone RP23-174O19 on chromosome X, complete sequence Length = 195054 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggag 169 |||||||||||| |||||||||||| Sbjct: 128672 ggcggcggcggcggccgcggcggag 128696
>gb|U02310.1|HSU02310 Human fork head domain protein (FKHR) mRNA, complete cds Length = 3421 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggc 165 ||||||||||||||||||||| Sbjct: 288 ggcggcggcggccgccgcggc 308
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gggcggcggcggccgccgcg 163 |||||||||||||||||||| Sbjct: 140267 gggcggcggcggccgccgcg 140286
>ref|XM_550026.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1558 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 835 ggcggcggcggcggcggcggcggagtcc 862
>ref|XM_474329.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1878 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 tcctcttcgagcagggcggc 259 |||||||||||||||||||| Sbjct: 908 tcctcttcgagcagggcggc 927
>ref|XM_464617.1| Oryza sativa (japonica cultivar-group), mRNA Length = 270 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 81 ggcggcggcggcggcggcggcggagtcc 54
>ref|XM_464518.1| Oryza sativa (japonica cultivar-group), mRNA Length = 814 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||||| ||||||||| Sbjct: 313 gcggcggcggccgcggcggcggag 336
>ref|XM_464222.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1890 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 79 ggcggcggcggcggcggcggcggagtcc 106
>ref|XM_506726.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1661_C12.27 mRNA Length = 1937 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 116 ggcggcggcggcggcggcggcggagtcc 143
>ref|NM_184579.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1770 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gggcggcggcggccgccgcggcgg 167 ||||||||||||| |||||||||| Sbjct: 17 gggcggcggcggcggccgcggcgg 40
>ref|NM_192515.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2439 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ggcggcggccgccgcggcgg 167 |||||||||||||||||||| Sbjct: 1826 ggcggcggccgccgcggcgg 1807
>ref|XM_478529.1| Oryza sativa (japonica cultivar-group), mRNA Length = 871 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gagggcggcggcggccgccg 161 |||||||||||||||||||| Sbjct: 487 gagggcggcggcggccgccg 506
>gb|AY023175.1| Oryza sativa microsatellite MRG5500 containing (GCG)X8, closest to marker G1064, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 103 ggcggcggcggcggcggcggcggagtcc 130
>gb|AY022720.1| Oryza sativa microsatellite MRG5045 containing (CCG)X9, closest to marker S13048, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 123 ggcggcggcggcggcggcggcggagtcc 96
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gggcggcggcggccgccgcg 163 |||||||||||||||||||| Sbjct: 123126 gggcggcggcggccgccgcg 123107
>gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genomic sequence, complete sequence Length = 130272 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gggcggcggcggccgccgcg 163 |||||||||||||||||||| Sbjct: 27145 gggcggcggcggccgccgcg 27126
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gggcggcggcggccgccgcg 163 |||||||||||||||||||| Sbjct: 162006 gggcggcggcggccgccgcg 162025
>ref|XM_592282.2| PREDICTED: Bos taurus similar to Zinc finger protein ZIC 2 (Zinc finger protein of the cerebellum 2) (LOC514433), mRNA Length = 2681 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggc 165 |||||||||||||||||||| Sbjct: 76 gcggcggcggccgccgcggc 95
>gb|AE009368.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 138 of 187 of the complete sequence Length = 12456 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agggcggcggcggccgccgc 162 |||||||||||||||||||| Sbjct: 9376 agggcggcggcggccgccgc 9395
>gb|AE008245.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 49 of 187 of the complete sequence Length = 11874 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 agggcggcggcggccgccgc 162 |||||||||||||||||||| Sbjct: 8838 agggcggcggcggccgccgc 8819
>gb|AY523976.1|AY523972S5 Azospirillum brasilense plasmid 90 MDa, partial sequence Length = 32896 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcgga 168 ||||||||||| |||||||||||| Sbjct: 1688 ggcggcggcggacgccgcggcgga 1665
>gb|AY340970.1| Bos taurus forkhead transcription factor L2 (FoxL2) gene, complete cds Length = 1134 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ggcggcggccgccgcggcgg 167 |||||||||||||||||||| Sbjct: 663 ggcggcggccgccgcggcgg 682
>gb|AC160533.6| Mus musculus chromosome 5, clone RP24-242L17, complete sequence Length = 170409 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||||| ||||||||| Sbjct: 163196 gcggcggcggccgcggcggcggag 163173
>ref|XM_854885.1| PREDICTED: Canis familiaris similar to aristaless related homeobox, transcript variant 5 (LOC608251), mRNA Length = 1794 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggc 165 |||||||||||||||||||| Sbjct: 436 gcggcggcggccgccgcggc 455
>ref|XM_844762.1| PREDICTED: Canis familiaris similar to aristaless related homeobox, transcript variant 4 (LOC608251), mRNA Length = 1824 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggc 165 |||||||||||||||||||| Sbjct: 466 gcggcggcggccgccgcggc 485
>gb|AC005158.3| Homo sapiens BAC clone GS1-250N6 from 7, complete sequence Length = 266344 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||| ||||||||||| Sbjct: 118959 gcggcggcggcccccgcggcggag 118982
>ref|XM_756138.1| Ustilago maydis 521 hypothetical protein (UM05084.1) partial mRNA Length = 1647 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 gtggcggcgttccggtccaaggac 211 |||||||||||||||| ||||||| Sbjct: 298 gtggcggcgttccggttcaaggac 321
>ref|NM_001031750.1| Bos taurus forkhead box L2 (FOXL2), mRNA Length = 1134 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ggcggcggccgccgcggcgg 167 |||||||||||||||||||| Sbjct: 663 ggcggcggccgccgcggcgg 682
>gb|BC013405.2| Homo sapiens cDNA clone IMAGE:2960331, partial cds Length = 1128 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gggcggcggcggccgccgcggcgg 167 ||||||||||||| |||||||||| Sbjct: 59 gggcggcggcggcggccgcggcgg 82
>emb|AL450304.33| Human DNA sequence from clone RP11-505O17 on chromosome 1 Contains the 5' end of a gene for a novel protein, a processed pseudogene similar to natural cytotoxicity triggering receptor 1 (NCR1), a processed pseudogene similar to keratin 18 (KRT18), the 5' end of the LAMC1 for laminin, gamma 1 (formerly LAMB2) and CpG island, complete sequence Length = 172837 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ggcggcggccgccgcggcgg 167 |||||||||||||||||||| Sbjct: 100647 ggcggcggccgccgcggcgg 100666
>emb|AL358780.22| Human DNA sequence from clone RP11-418C1 on chromosome 10 Contains two novel genes (FLJ31094), the gene for a novel protein, the 5' end of the MLLT10 gene for myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to 10 (AF10), a noel gene (DKFZP761J229) and six CpG islands, complete sequence Length = 112311 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcgg 164 |||||||||||||||||||| Sbjct: 48389 ggcggcggcggccgccgcgg 48370
>gb|AY050629.1| Homo sapiens peptide/histidine transporter mRNA, complete cds Length = 2736 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gggcggcggcggccgccgcggcgg 167 |||||||||||||||| ||||||| Sbjct: 59 gggcggcggcggccgcggcggcgg 82
>emb|AL138695.13| Human DNA sequence from clone RP11-342J4 on chromosome 13, complete sequence Length = 68273 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 gggcggcggcggccgccgcggcgg 167 ||||||||||||| |||||||||| Sbjct: 16045 gggcggcggcggcggccgcggcgg 16022
>gb|AF352564.2| Pseudorabies virus immediate-early protein IE180 gene, complete cds Length = 6281 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcggag 169 ||||||||||| |||||||||||| Sbjct: 5980 gcggcggcggcggccgcggcggag 6003
>gb|AC108704.3| Homo sapiens 12 BAC RP11-21K12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 117432 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 gggcggcggcggccgccgcggcgg 167 |||||||||||||||| ||||||| Sbjct: 89533 gggcggcggcggccgcggcggcgg 89510
>ref|XM_966931.1| PREDICTED: Tribolium castaneum similar to eukaryotic translation initiation factor 4H (LOC660722), mRNA Length = 852 Score = 40.1 bits (20), Expect = 5.2 Identities = 44/52 (84%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggagtccgggggccgcgacccggtggcggcg 196 |||||||||||| | | ||||| |||| |||||||||||||| ||||||| Sbjct: 394 ggcggcggcggcggaggtggcggtttccgcgggccgcgacccggcggcggcg 445
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggc 165 |||||||||||||||||||| Sbjct: 334075 gcggcggcggccgccgcggc 334056
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggc 165 |||||||||||||||||||| Sbjct: 126462 gcggcggcggccgccgcggc 126443
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggc 165 |||||||||||||||||||| Sbjct: 167253 gcggcggcggccgccgcggc 167234
>gb|BC067813.1| Homo sapiens laminin, gamma 1 (formerly LAMB2), mRNA (cDNA clone IMAGE:30341665), complete cds Length = 2420 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ggcggcggccgccgcggcgg 167 |||||||||||||||||||| Sbjct: 329 ggcggcggccgccgcggcgg 348
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tcctcttcgagcagggcggc 259 |||||||||||||||||||| Sbjct: 104995 tcctcttcgagcagggcggc 104976
>gb|AY038999.1| Homo sapiens peptide/histidine transporter (PTR4) mRNA, complete cds Length = 2807 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gggcggcggcggccgccgcggcgg 167 |||||||||||||||| ||||||| Sbjct: 114 gggcggcggcggccgcggcggcgg 137
>dbj|AK220523.1| Mus musculus mRNA for mKIAA4175 protein Length = 3962 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcgg 164 |||||||||||||||||||| Sbjct: 398 ggcggcggcggccgccgcgg 379
>dbj|AB234866.1| Homo sapiens DLN-1 mRNA for DLN-1, complete cds Length = 2661 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcgg 164 |||||||||||||||||||| Sbjct: 790 ggcggcggcggccgccgcgg 809
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ggcggcggccgccgcggcgg 167 |||||||||||||||||||| Sbjct: 3290970 ggcggcggccgccgcggcgg 3290951
>dbj|AK127130.1| Homo sapiens cDNA FLJ45187 fis, clone BRAWH3048548 Length = 3632 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcgg 164 |||||||||||||||||||| Sbjct: 224 ggcggcggcggccgccgcgg 243
>dbj|AK131646.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1520401I17 product:protein phosphatase 1 (formerly 2C)-like, full insert sequence Length = 3936 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcgg 164 |||||||||||||||||||| Sbjct: 380 ggcggcggcggccgccgcgg 361
>dbj|AK142789.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930013F20 product:protein phosphatase 1 (formerly 2C)-like, full insert sequence Length = 3748 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcgg 164 |||||||||||||||||||| Sbjct: 411 ggcggcggcggccgccgcgg 392
>dbj|AK147389.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1026H21 product:protein phosphatase 1 (formerly 2C)-like, full insert sequence Length = 9346 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcgg 164 |||||||||||||||||||| Sbjct: 396 ggcggcggcggccgccgcgg 377
>ref|XM_936836.1| PREDICTED: Homo sapiens similar to RIKEN cDNA 2410129H14, transcript variant 3 (LOC440145), mRNA Length = 2390 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gggcggcggcggccgccgcggcgg 167 ||||||||||||| |||||||||| Sbjct: 205 gggcggcggcggcggccgcggcgg 228
>ref|XM_495961.2| PREDICTED: Homo sapiens similar to RIKEN cDNA 2410129H14, transcript variant 1 (LOC440145), mRNA Length = 2390 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gggcggcggcggccgccgcggcgg 167 ||||||||||||| |||||||||| Sbjct: 205 gggcggcggcggcggccgcggcgg 228
>dbj|AK147876.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270074O13 product:protein phosphatase 1 (formerly 2C)-like, full insert sequence Length = 3991 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcgg 164 |||||||||||||||||||| Sbjct: 430 ggcggcggcggccgccgcgg 411
>dbj|AK165160.1| Mus musculus 8 cells embryo 8 cells cDNA, RIKEN full-length enriched library, clone:E860006M09 product:protein phosphatase 1 (formerly 2C)-like, full insert sequence Length = 3778 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcgg 164 |||||||||||||||||||| Sbjct: 426 ggcggcggcggccgccgcgg 407
>gb|S42303.1| N-cadherin [human, umbilical vein endothelial cells, mRNA, 4132 nt] Length = 4132 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 140 gagagggcggcggcggccgccgcggcgg 167 ||||||||||||||||| || ||||||| Sbjct: 431 gagagggcggcggcggcggcggcggcgg 404
>dbj|AK032529.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430584D05 product:CDNA FLJ30553 FIS, CLONE BRAWH2003689, HIGHLY SIMILAR TO MUS MUSCULUS CLONE MOUSE1-9 PUTATIVE PROTEIN PHOSPHATASE TYPE 2C MRNA homolog [Homo sapiens], full insert sequence Length = 3701 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcgg 164 |||||||||||||||||||| Sbjct: 451 ggcggcggcggccgccgcgg 432
>dbj|AK035912.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630017L10 product:hypothetical Protein serine/threonine phosphatase 2C structure containing protein, full insert sequence Length = 3369 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcgg 164 |||||||||||||||||||| Sbjct: 396 ggcggcggcggccgccgcgg 377
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gagagggcggcggcggccgc 159 |||||||||||||||||||| Sbjct: 1382181 gagagggcggcggcggccgc 1382200
>gb|AC156447.2| Volvox carteri clone JGIAOBO-33C7, complete sequence Length = 34892 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ggcggcggccgccgcggcgg 167 |||||||||||||||||||| Sbjct: 15628 ggcggcggccgccgcggcgg 15609
>dbj|AK045986.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230331A14 product:GRSF-1 protein (fragment) homolog [Homo sapiens], full insert sequence Length = 2468 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||||| ||||||||| Sbjct: 289 gcggcggcggccgcggcggcggag 266
>dbj|AK045724.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230307L22 product:CDNA FLJ30553 FIS, CLONE BRAWH2003689, HIGHLY SIMILAR TO MUS MUSCULUS CLONE MOUSE1-9 PUTATIVE PROTEIN PHOSPHATASE TYPE 2C MRNA homolog [Homo sapiens], full insert sequence Length = 3746 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcgg 164 |||||||||||||||||||| Sbjct: 434 ggcggcggcggccgccgcgg 415
>dbj|AK044889.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130010H02 product:GRSF-1 protein (fragment) homolog [Homo sapiens], full insert sequence Length = 1517 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||||| ||||||||| Sbjct: 336 gcggcggcggccgcggcggcggag 313
>gb|BC096031.1| Mus musculus protein phosphatase 1 (formerly 2C)-like, mRNA (cDNA clone MGC:106606 IMAGE:6837066), complete cds Length = 3969 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcgg 164 |||||||||||||||||||| Sbjct: 393 ggcggcggcggccgccgcgg 374
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcggag 169 ||||||||||| |||||||||||| Sbjct: 141746 gcggcggcggcggccgcggcggag 141769 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggcggag 169 ||||||||||| |||||||||||| Sbjct: 102856 gcggcggcggcggccgcggcggag 102833
>dbj|AK048313.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130048F06 product:RIKEN cDNA 4930429B21 gene, full insert sequence Length = 3816 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 142 gagggcggcggcggccgccgcggcggag 169 ||||||||||||||| || ||||||||| Sbjct: 341 gagggcggcggcggcggcggcggcggag 314
>ref|XM_393686.2| PREDICTED: Apis mellifera similar to CG10037-PA (LOC410203), mRNA Length = 1834 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ggcggcggccgccgcggcgg 167 |||||||||||||||||||| Sbjct: 477 ggcggcggccgccgcggcgg 458
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||||| ||||||||| Sbjct: 6818911 gcggcggcggccgcggcggcggag 6818888
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 6341448 ggcggcggcggcggcggcggcggagtcc 6341475 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||||| ||||||||| Sbjct: 5654936 gcggcggcggccgcggcggcggag 5654913 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 3500033 ggcggcggcggcggcggcggcggagtcc 3500006
>gb|AC146165.2| Pan troglodytes BAC clone RP43-36N14 from chromosome 7, complete sequence Length = 159324 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||| ||||||||||| Sbjct: 62292 gcggcggcggcccccgcggcggag 62315
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cggcggcggccgccgcggcg 166 |||||||||||||||||||| Sbjct: 124632 cggcggcggccgccgcggcg 124613
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 cctcttcgagcagggcggcc 260 |||||||||||||||||||| Sbjct: 1556394 cctcttcgagcagggcggcc 1556375
>gb|AY024355.1| Mus musculus DNase gamma gene, complete cds Length = 30807 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcggag 169 ||||||||||||||||| |||||| Sbjct: 7167 gcggcggcggccgccgccgcggag 7190
>ref|NM_002293.2| Homo sapiens laminin, gamma 1 (formerly LAMB2) (LAMC1), mRNA Length = 7923 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ggcggcggccgccgcggcgg 167 |||||||||||||||||||| Sbjct: 371 ggcggcggccgccgcggcgg 390
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cggcggcggccgccgcggcg 166 |||||||||||||||||||| Sbjct: 31414 cggcggcggccgccgcggcg 31395
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 cgccagcgaggttttccgct 236 |||||||||||||||||||| Sbjct: 3448090 cgccagcgaggttttccgct 3448071
>dbj|AP005475.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0091L05 Length = 173983 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcgga 168 ||||||||||||||| |||||||| Sbjct: 72568 ggcggcggcggccgcggcggcgga 72591
>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1267_F10 Length = 162669 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 138835 ggcggcggcggcggcggcggcggagtcc 138862
>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504H10 Length = 143515 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 118218 ggcggcggcggcggcggcggcggagtcc 118191
>dbj|AP006237.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008D07 Length = 156874 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 gggcggcggcggccgccgcggcgg 167 ||||||||||||| |||||||||| Sbjct: 72414 gggcggcggcggcggccgcggcgg 72391
>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0024F06 Length = 129402 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ggcggcggccgccgcggcgg 167 |||||||||||||||||||| Sbjct: 50778 ggcggcggccgccgcggcgg 50759
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 17257 ggcggcggcggcggcggcggcggagtcc 17230
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gagggcggcggcggccgccg 161 |||||||||||||||||||| Sbjct: 89392 gagggcggcggcggccgccg 89373
>gb|BC062361.1| Homo sapiens similar to RIKEN cDNA 2410129H14, mRNA (cDNA clone IMAGE:5474979) Length = 2268 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gggcggcggcggccgccgcggcgg 167 ||||||||||||| |||||||||| Sbjct: 54 gggcggcggcggcggccgcggcgg 77
>gb|BC080523.1| Homo sapiens similar to RIKEN cDNA 2410129H14, mRNA (cDNA clone IMAGE:4304644) Length = 1139 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gggcggcggcggccgccgcggcgg 167 ||||||||||||| |||||||||| Sbjct: 70 gggcggcggcggcggccgcggcgg 93
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0023I17 Length = 141852 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 44828 ggcggcggcggcggcggcggcggagtcc 44801
>dbj|AP004093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1661_C12 Length = 122214 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 112856 ggcggcggcggcggcggcggcggagtcc 112829
>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419A09 Length = 168064 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||||| ||||||||| Sbjct: 82672 gcggcggcggccgcggcggcggag 82649
>emb|X15120.1|HEPVIE Pseudorabies virus immediate-early gene Length = 5123 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcggag 169 ||||||||||| |||||||||||| Sbjct: 4966 gcggcggcggcggccgcggcggag 4989
>dbj|AK121853.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101P07, full insert sequence Length = 3365 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||||| ||||||||| Sbjct: 412 gcggcggcggccgcggcggcggag 435
>gb|AC009716.22| Homo sapiens chromosome 18, clone RP11-504I13, complete sequence Length = 211981 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 tccccaagaagagcgagatccacc 59 |||||||||||||||||| ||||| Sbjct: 21432 tccccaagaagagcgagagccacc 21455
>dbj|AK119913.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-F01, full insert sequence Length = 2216 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 tcctcttcgagcagggcggc 259 |||||||||||||||||||| Sbjct: 938 tcctcttcgagcagggcggc 957
>dbj|AK025522.1| Homo sapiens cDNA: FLJ21869 fis, clone HEP02442 Length = 2287 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gggcggcggcggccgccgcggcgg 167 ||||||||||||| |||||||||| Sbjct: 94 gggcggcggcggcggccgcggcgg 117
>ref|XM_314526.2| Anopheles gambiae str. PEST ENSANGP00000016235 (ENSANGG00000013746), partial mRNA Length = 2052 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggc 165 |||||||||||||||||||| Sbjct: 1510 gcggcggcggccgccgcggc 1529
>dbj|AK111249.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-D10, full insert sequence Length = 871 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gagggcggcggcggccgccg 161 |||||||||||||||||||| Sbjct: 487 gagggcggcggcggccgccg 506
>dbj|AK109126.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-D05, full insert sequence Length = 851 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ggcggcggccgccgcggcgg 167 |||||||||||||||||||| Sbjct: 188 ggcggcggccgccgcggcgg 169
>dbj|AK106795.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-B03, full insert sequence Length = 1558 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 835 ggcggcggcggcggcggcggcggagtcc 862
>dbj|AK102652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101E02, full insert sequence Length = 3151 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||||| ||||||||| Sbjct: 400 gcggcggcggccgcggcggcggag 423
>dbj|AK101610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052D01, full insert sequence Length = 1890 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 79 ggcggcggcggcggcggcggcggagtcc 106
>dbj|AK069562.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019O21, full insert sequence Length = 1937 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcggcggagtcc 172 |||||||||||| || |||||||||||| Sbjct: 116 ggcggcggcggcggcggcggcggagtcc 143
>dbj|AK068381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147P03, full insert sequence Length = 813 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||||| ||||||||| Sbjct: 312 gcggcggcggccgcggcggcggag 335
>dbj|AK065655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037J06, full insert sequence Length = 2656 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||||| ||||||||| Sbjct: 398 gcggcggcggccgcggcggcggag 421
>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete sequence Length = 138387 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tcctcttcgagcagggcggc 259 |||||||||||||||||||| Sbjct: 109040 tcctcttcgagcagggcggc 109021
>emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0103C06, complete sequence Length = 104146 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tcctcttcgagcagggcggc 259 |||||||||||||||||||| Sbjct: 19373 tcctcttcgagcagggcggc 19354
>gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, complete sequence Length = 248750 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggccgccgcgg 164 |||||||||||||||||||| Sbjct: 127637 ggcggcggcggccgccgcgg 127656
>emb|BX539316.6| Mouse DNA sequence from clone RP24-216F23 on chromosome 7, complete sequence Length = 178673 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 gccagggaaagacagagagg 79 |||||||||||||||||||| Sbjct: 44632 gccagggaaagacagagagg 44613
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcgg 164 |||||||||||||||||||| Sbjct: 3877385 ggcggcggcggccgccgcgg 3877366
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 142 gagggcggcggcggccgccgcggc 165 ||||||||||||||| |||||||| Sbjct: 2072064 gagggcggcggcggcggccgcggc 2072041
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 caccttcgagagggcggcggcggc 156 |||||||||| ||||||||||||| Sbjct: 2180508 caccttcgagcgggcggcggcggc 2180531
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||||| ||||||||| Sbjct: 6818790 gcggcggcggccgcggcggcggag 6818767
>emb|AL731740.4|CNS08C7P Oryza sativa chromosome 12, . BAC OSJNBb0001P19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144563 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||||| ||||||||| Sbjct: 143127 gcggcggcggccgcggcggcggag 143150
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 cttcgagcagggcggcctcg 263 |||||||||||||||||||| Sbjct: 135026 cttcgagcagggcggcctcg 135045
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ccgccgcggcggagtccggg 175 |||||||||||||||||||| Sbjct: 5590538 ccgccgcggcggagtccggg 5590557
>ref|NM_178726.2| Mus musculus protein phosphatase 1 (formerly 2C)-like (Ppm1l), mRNA Length = 3969 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggccgccgcgg 164 |||||||||||||||||||| Sbjct: 393 ggcggcggcggccgccgcgg 374
>ref|NM_145648.1| Homo sapiens solute carrier family 15, member 4 (SLC15A4), mRNA Length = 2807 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gggcggcggcggccgccgcggcgg 167 |||||||||||||||| ||||||| Sbjct: 114 gggcggcggcggccgcggcggcgg 137
>emb|AJ000757.1|HSAJ757 Homo sapiens CpG island in the 5' genomic region of GLI3 gene Length = 3046 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggcggag 169 |||||||||||| ||||||||||| Sbjct: 2423 gcggcggcggccaccgcggcggag 2400
>gb|M55217.1|HUMLB2A01 Human laminin B2 chain (LAMB2) gene, exon 1 Length = 2042 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ggcggcggccgccgcggcgg 167 |||||||||||||||||||| Sbjct: 1254 ggcggcggccgccgcggcgg 1273
>gb|J03202.1|HUMLAMBB Human laminin B2 chain mRNA, complete cds Length = 5306 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ggcggcggccgccgcggcgg 167 |||||||||||||||||||| Sbjct: 331 ggcggcggccgccgcggcgg 350
>emb|AJ291309.1|OCU291309 Oryctolagus cuniculus partial mRNA for eHAND basic helix-loop-helix transcription factor (eHAND gene) Length = 660 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ggcggcggccgccgcggcgg 167 |||||||||||||||||||| Sbjct: 219 ggcggcggccgccgcggcgg 200
>gb|M81222.1|SH1SEQ Herpesvirus-pseudorabies virus mRNA sequence Length = 4968 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggcggag 169 ||||||||||| |||||||||||| Sbjct: 4912 gcggcggcggcggccgcggcggag 4889
>gb|M34651.1|SH1PROIE Pseudorabies virus with upstream and downsteam sequences Length = 15141 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcggag 169 ||||||||||| |||||||||||| Sbjct: 10170 gcggcggcggcggccgcggcggag 10193
>gb|M57505.1|SH1LLT Pseudorabies virus ORF1, ORF2, and ORF3 mRNA, complete cds Length = 8438 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggcggag 169 ||||||||||| |||||||||||| Sbjct: 2098 gcggcggcggcggccgcggcggag 2075
>gb|M25527.1|SH1EGB Pseudorabiesvirus immediate-early gene DNA sequence Length = 217 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gcggcggcggccgccgcggcggag 169 ||||||||||| |||||||||||| Sbjct: 57 gcggcggcggcggccgcggcggag 80
>gb|AC018413.10| Homo sapiens chromosome 18, clone RP11-17M16, complete sequence Length = 112797 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 tccccaagaagagcgagatccacc 59 |||||||||||||||||| ||||| Sbjct: 41462 tccccaagaagagcgagagccacc 41439
>gb|L10720.1|BPETOXOP Bordetella pertussis toxin liberation operon Length = 9342 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggc 165 |||||||||||||||||||| Sbjct: 4307 gcggcggcggccgccgcggc 4288
>gb|L24958.1|SH1ULTRJ Pseudorabies virus long terminal repeat junction Length = 2080 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gcggcggcggccgccgcggcggag 169 ||||||||||| |||||||||||| Sbjct: 2024 gcggcggcggcggccgcggcggag 2001
>dbj|AB070957.1| Streptomyces avermitilis peptide-8 biosynthetic gene cluster Length = 14219 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 cctcttcgagcagggcggcc 260 |||||||||||||||||||| Sbjct: 13392 cctcttcgagcagggcggcc 13373 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,077,814 Number of Sequences: 3902068 Number of extensions: 3077814 Number of successful extensions: 105008 Number of sequences better than 10.0: 236 Number of HSP's better than 10.0 without gapping: 257 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97947 Number of HSP's gapped (non-prelim): 7000 length of query: 389 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 367 effective length of database: 17,147,199,772 effective search space: 6293022316324 effective search space used: 6293022316324 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)