ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast58e01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1REF_HEVBR (P15252) Rubber elongation factor protein (REF) (Aller... 38 0.006
2SRPP_HEVBR (O82803) Small rubber particle protein (SRPP) (22 kDa... 36 0.029
3Y1A7_ORYSA (Q9FRA7) Hypothetical protein P0001A07.13 36 0.029
4Y3550_ARATH (Q9MA63) Protein At3g05500 34 0.11
5SRP_VITRI (Q9SW70) Stress-related protein 31 0.72
6Y2778_ARATH (O82246) Protein At2g47780 30 1.6
7S10AE_MOUSE (Q9D2Q8) Protein S100-A14 (S100 calcium-binding prot... 28 4.7
8S10AE_BOVIN (Q3MHP3) Protein S100-A14 (S100 calcium-binding prot... 28 4.7

>REF_HEVBR (P15252) Rubber elongation factor protein (REF) (Allergen Hev b 1)|
          Length = 137

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 126 DSSQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVD 266
           + +QQ +   L+ LGF              +Y  A+D SGPL+PGVD
Sbjct: 4   EDNQQGQGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGVD 50



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>SRPP_HEVBR (O82803) Small rubber particle protein (SRPP) (22 kDa rubber|
           particle protein) (22 kDa RPP) (Latex allergen Hev b 3)
           (27 kDa natural rubber allergen)
          Length = 204

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 132 SQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVD 266
           +++ E  RL+ L F              LY  A+D SGPL+PGVD
Sbjct: 2   AEEVEEERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVD 46



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>Y1A7_ORYSA (Q9FRA7) Hypothetical protein P0001A07.13|
          Length = 253

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 22/65 (33%), Positives = 26/65 (40%)
 Frame = +3

Query: 72  APTSFQKPPRSFDSRAMADSSQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPL 251
           AP S  +P          +    AE  RLR L F               YA A+  +GPL
Sbjct: 8   APIS-NRPEEEVTVEKTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPL 66

Query: 252 RPGVD 266
           RPGVD
Sbjct: 67  RPGVD 71



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>Y3550_ARATH (Q9MA63) Protein At3g05500|
          Length = 246

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 144 ERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDA 269
           E+ RL+ L F              +YA A+D SGPL+PGV++
Sbjct: 18  EKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVES 59



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>SRP_VITRI (Q9SW70) Stress-related protein|
          Length = 248

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 144 ERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGV 263
           E  RL+ L F              LY  A+++SGPL+PGV
Sbjct: 16  EEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGV 55



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>Y2778_ARATH (O82246) Protein At2g47780|
          Length = 235

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +3

Query: 93  PPRSFDSRAMADSSQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVD 266
           PP S  S ++    +  +  +L+ L F              LY LA+D++GPL+ GV+
Sbjct: 22  PPSSSSSPSLV--VEDDDEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVE 77



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>S10AE_MOUSE (Q9D2Q8) Protein S100-A14 (S100 calcium-binding protein A14) (S114)|
          Length = 104

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
 Frame = -2

Query: 145 SACWLESAIARESN------ERGGFWKLVGANAKSTR 53
           S C LE  IA   N      E G FW+L+G  AKS +
Sbjct: 60  SNCGLEEKIANLGNCNDSKLEFGSFWELIGEAAKSVK 96



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>S10AE_BOVIN (Q3MHP3) Protein S100-A14 (S100 calcium-binding protein A14)|
          Length = 104

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
 Frame = -2

Query: 145 SACWLESAIARESN------ERGGFWKLVGANAKSTR 53
           S C LE  IA   N      E G FW+L+G  AKS +
Sbjct: 60  SNCGLEEKIANLGNCNDSKLEFGSFWELIGEAAKSVK 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,381,786
Number of Sequences: 219361
Number of extensions: 487885
Number of successful extensions: 1925
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1925
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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