ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast58d10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | FBN1_PIG (Q9TV36) Fibrillin-1 precursor | 28 | 8.7 | 2 | FBN1_MOUSE (Q61554) Fibrillin-1 precursor | 28 | 8.7 | 3 | FBN1_HUMAN (P35555) Fibrillin-1 precursor | 28 | 8.7 | 4 | FBN1_BOVIN (P98133) Fibrillin-1 precursor (MP340) | 28 | 8.7 |
|---|
>FBN1_PIG (Q9TV36) Fibrillin-1 precursor| Length = 2871 Score = 28.5 bits (62), Expect = 8.7 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = -1 Query: 94 PEERCHAKETSCTAMEGEG-RR*CVLCETD 8 P+ R H+K+ C A++GEG C LC T+ Sbjct: 2073 PKSRNHSKQECCCALKGEGWGDPCELCPTE 2102
>FBN1_MOUSE (Q61554) Fibrillin-1 precursor| Length = 2871 Score = 28.5 bits (62), Expect = 8.7 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = -1 Query: 94 PEERCHAKETSCTAMEGEG-RR*CVLCETD 8 P+ R H+K+ C A++GEG C LC T+ Sbjct: 2073 PKSRNHSKQECCCALKGEGWGDPCELCPTE 2102
>FBN1_HUMAN (P35555) Fibrillin-1 precursor| Length = 2871 Score = 28.5 bits (62), Expect = 8.7 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = -1 Query: 94 PEERCHAKETSCTAMEGEG-RR*CVLCETD 8 P+ R H+K+ C A++GEG C LC T+ Sbjct: 2073 PKSRNHSKQECCCALKGEGWGDPCELCPTE 2102
>FBN1_BOVIN (P98133) Fibrillin-1 precursor (MP340)| Length = 2871 Score = 28.5 bits (62), Expect = 8.7 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = -1 Query: 94 PEERCHAKETSCTAMEGEG-RR*CVLCETD 8 P+ R H+K+ C A++GEG C LC T+ Sbjct: 2073 PKSRNHSKQECCCALKGEGWGDPCELCPTE 2102 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,545,185 Number of Sequences: 219361 Number of extensions: 1185572 Number of successful extensions: 2336 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2287 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2336 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
