ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast58c12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 87 2e-17
2FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 80 2e-15
3APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 45 9e-05
4APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 42 6e-04
5GATA_MYCLE (O33105) Glutamyl-tRNA(Gln) amidotransferase subunit ... 32 0.62
6CATE_CAVPO (P25796) Cathepsin E precursor (EC 3.4.23.34) 32 0.81
7PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM ... 31 1.1
8GUN6_DICDI (P22699) Endoglucanase precursor (EC 3.2.1.4) (Endo-1... 31 1.1
9PCDG4_HUMAN (Q9Y5G9) Protocadherin gamma A4 precursor (PCDH-gamm... 30 1.8
10PCDG4_PANTR (Q5DRB6) Protocadherin gamma A4 precursor (PCDH-gamm... 30 2.4
11LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglyc... 30 2.4
12DBP7_GIBZE (Q4HZ68) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-) 30 2.4
13YRR2_CAEEL (Q09345) Hypothetical protein R144.2 29 4.0
14AT131_HUMAN (Q9HD20) Probable cation-transporting ATPase 13A1 (E... 29 5.3
15DUSC_HAEDU (Q7VKU5) tRNA-dihydrouridine synthase C (EC 1.-.-.-) 28 9.0
16WN10B_MOUSE (P48614) Protein Wnt-10b precursor (Wnt-12) 28 9.0

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 44/93 (47%), Positives = 60/93 (64%)
 Frame = +2

Query: 47  SSHAQKYNAVFNFGDSITDTGNLCTSGKPTAITFTQPPYGETYFGSPTCRCSDGRVIVDF 226
           +S    + A+FNFGDS +DTG     GK  A     PPYGET+F   T R SDGR+I+DF
Sbjct: 26  ASETCDFPAIFNFGDSNSDTG-----GKAAAFYPLNPPYGETFFHRSTGRYSDGRLIIDF 80

Query: 227 LSTKFGVPFLAPSKSSNGTDFKQGANMAITGAT 325
           ++  F +P+L+P  SS G++FK GA+ A  G+T
Sbjct: 81  IAESFNLPYLSPYLSSLGSNFKHGADFATAGST 113



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
 Frame = +2

Query: 47  SSHAQK--YNAVFNFGDSITDTGNLCTSGKPTAITFTQPPYGETYFGSPTCRCSDGRVIV 220
           S+HA +  + A+FNFGDS +DTG L       A     PP+G ++FGSP  R  DGR+++
Sbjct: 20  STHAHQCHFPAIFNFGDSNSDTGGLSA-----AFGQAGPPHGSSFFGSPAGRYCDGRLVI 74

Query: 221 DFLSTKFGVPFLAPSKSSNGTDFKQGANMAITGATAMDAPFFRGLGLSDKIWNNGPISLQ 400
           DF++   G+P+L+    S G++F  GAN A  G+        R L  + +     P SL 
Sbjct: 75  DFIAESLGLPYLSAFLDSVGSNFSHGANFATAGSP------IRALNSTLRQSGFSPFSLD 128

Query: 401 IQWFQ 415
           +Q+ Q
Sbjct: 129 VQFVQ 133



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>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +2

Query: 71  AVFNFGDSITDTGNLCTSGKPTAITFTQPPYGETY-FGSPTCRCSDGRVIVDFLSTKFGV 247
           AVF FGDSI DTGN   +   T +     PYG  +  G  T R S+GRV  D++S   GV
Sbjct: 125 AVFFFGDSIFDTGN--NNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGV 182

Query: 248 PFLAPS 265
             + P+
Sbjct: 183 KEIVPA 188



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
 Frame = +2

Query: 71  AVFNFGDSITDTGNLCTSGKPTAITFTQPPYGETY-FGSPTCRCSDGRVIVDFLSTKFGV 247
           AVF FGDS+ DTGN   +   T I     PYG  + F   T R S+G V  D+L+   GV
Sbjct: 204 AVFFFGDSVFDTGN--NNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGV 261

Query: 248 PFLAPS---KSSNGTDFKQGANMAITGA 322
             + P+         D   G + A  GA
Sbjct: 262 KEIVPAYLDPKIQPNDLLTGVSFASGGA 289



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>GATA_MYCLE (O33105) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)|
           (Glu-ADT subunit A)
          Length = 497

 Score = 32.0 bits (71), Expect = 0.62
 Identities = 20/52 (38%), Positives = 28/52 (53%)
 Frame = -1

Query: 427 GGDLLEPLDLEADGPVVPDLVGQAEAAEEGRVHGRRPRDGHVGALLEVRAVG 272
           G D  +   +EA    VPD+VG A+A E G +HG R     VG + ++R  G
Sbjct: 238 GHDARDSTSVEA---AVPDIVGAAKAGESGDLHGVR-----VGVVRQLRGEG 281



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>CATE_CAVPO (P25796) Cathepsin E precursor (EC 3.4.23.34)|
          Length = 391

 Score = 31.6 bits (70), Expect = 0.81
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = +2

Query: 92  SITDTGNLCTSGKPTAITFTQPPYGETYFGSP-TCRCSDGRVIVDFLSTKFGVPFLAPSK 268
           +I DTG    +G P  I   Q   G TY     + +C++  +++D      GVP+     
Sbjct: 273 AIVDTGTSLITGPPGKIKQLQEALGATYVDEGYSVQCANLNMMLDVTFIINGVPYTLNPT 332

Query: 269 SSNGTDFKQGANMAITGATAMD 334
           +    DF  G  +  TG   ++
Sbjct: 333 AYTLLDFVDGMQVCSTGFEGLE 354



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>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore|
            membrane protein of 121 kDa) (P145)
          Length = 1229

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
 Frame = +2

Query: 71   AVFNFGDSITD----TGNLCTSGKPTAITFTQPPYGETYFGSPTCRCSDGRVIVDFLSTK 238
            AVF+FG + +     T    +SG  +++  +  P   T+ GS     S            
Sbjct: 1041 AVFSFGAATSSGFGATTQTASSGSSSSVFGSTTPSPFTFGGSAAPAGSGS---------- 1090

Query: 239  FGVPFLAPSKSSNGTDFKQGANMAITGATAMDAPFFRGLG 358
            FG+    P  S+    F  GA  +  G+TA   PF  GLG
Sbjct: 1091 FGINVATPGSSATTGAFSFGAGQS--GSTATSTPFTGGLG 1128



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>GUN6_DICDI (P22699) Endoglucanase precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Spore germination protein
           270-6) (Cellulase)
          Length = 705

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 13/108 (12%)
 Frame = +2

Query: 92  SITDTGNLCTSGKPTAITFTQPPYGETYFGSPTCRCSD--GRVIVDFLSTKFGVPFLAPS 265
           S+TDT N+  SG+  +I+FT   YG  + G   C  +D    +  D      G   L  +
Sbjct: 578 SLTDTTNV-ESGETNSISFTPKAYGAVFLGCFECIDTDTYNNIEFDINGGSSGAQLLRIT 636

Query: 266 KSSNG--------TDFKQGANMAITGATAMDAPF---FRGLGLSDKIW 376
              N         TD   G  +     T + A F   F+  G  D IW
Sbjct: 637 VVKNSKSVGSKLITDLNGGTPIEANSWTKIKASFIDDFKVSGKVDGIW 684



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>PCDG4_HUMAN (Q9Y5G9) Protocadherin gamma A4 precursor (PCDH-gamma-A4)|
          Length = 931

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
 Frame = +2

Query: 47   SSHAQKYNAVFNFGDSITDTGNLCTSGKPTAITFTQPPYGETYFGSPTCRCSDGRVIV-D 223
            +SH    + V  F  + +   +L    + + + F+QP Y +T     +C  S+  +I  D
Sbjct: 737  ASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLISRESCEKSEPLLITQD 796

Query: 224  FLSTKFGVPFLAPSKSSNGTDFKQGANMAITGA 322
             L TK G P L  +  +    F Q      +G+
Sbjct: 797  LLETK-GDPNLQQAPPNTDWRFSQAQRPGTSGS 828



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>PCDG4_PANTR (Q5DRB6) Protocadherin gamma A4 precursor (PCDH-gamma-A4)|
          Length = 931

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
 Frame = +2

Query: 47   SSHAQKYNAVFNFGDSITDTGNLCTSGKPTAITFTQPPYGETYFGSPTCRCSDGRVIV-D 223
            +SH    + V  F  + +   +L    + + + F+QP Y +T     +C  S+  +I  D
Sbjct: 737  ASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLISLESCEKSEPLLITQD 796

Query: 224  FLSTKFGVPFLAPSKSSNGTDFKQGANMAITGA 322
             L TK G P L  +  +    F Q      +G+
Sbjct: 797  LLETK-GDPNLQQAPPNTDWRFSQAQRPGTSGS 828



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>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
          Length = 645

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 27/94 (28%), Positives = 43/94 (45%)
 Frame = +2

Query: 50  SHAQKYNAVFNFGDSITDTGNLCTSGKPTAITFTQPPYGETYFGSPTCRCSDGRVIVDFL 229
           S+A  YN ++ FGDS++D GN   +G+ T                     ++ ++  DF+
Sbjct: 20  SNAHAYNNLYVFGDSLSDGGN---NGRYTV---------------DGINGTESKLYNDFI 61

Query: 230 STKFGVPFLAPSKSSNGTDFKQGANMAITGATAM 331
           + + G+  L  SK       K G N A  GATA+
Sbjct: 62  AQQLGIE-LVNSK-------KGGTNYAAGGATAV 87



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>DBP7_GIBZE (Q4HZ68) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)|
          Length = 744

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
 Frame = +2

Query: 62  KYNAVFNFGDSITDTGNLCTSGKP-TAITFTQPPYGETYF------GSPTCRCSDGRVIV 220
           +Y+  F+F D I   G    +GKP  A+ F  P   E Y        +PT +  D  ++ 
Sbjct: 541 EYDPAFSFADHIHRVGRTARAGKPGDALLFLLPGTEEGYIELMKGSTTPTSQSYDS-ILQ 599

Query: 221 DFLSTKFGVPFLAPSKSSNGTDFKQGA 301
             + TK   P    +K  +G  F   A
Sbjct: 600 KGMMTKLEFPVETTAKPEDGHSFHDKA 626



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>YRR2_CAEEL (Q09345) Hypothetical protein R144.2|
          Length = 823

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 19/58 (32%), Positives = 24/58 (41%)
 Frame = +2

Query: 95  ITDTGNLCTSGKPTAITFTQPPYGETYFGSPTCRCSDGRVIVDFLSTKFGVPFLAPSK 268
           + DT  +   G P  I F  PP      G P     D    +D L +K  V F APS+
Sbjct: 426 VDDTAVIERGGAPHRIYFAGPPRNLVIDGIPHLLQFDTPTQIDILGSKHMVKFGAPSR 483



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>AT131_HUMAN (Q9HD20) Probable cation-transporting ATPase 13A1 (EC 3.6.3.-)|
          Length = 1204

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = +1

Query: 1   AAAATLGRAASCG---CGVQPRPEVQRGVQLRRL 93
           AAAA +G A  CG   CGV+P  + + G Q R L
Sbjct: 2   AAAAAVGNAVPCGARPCGVRPDGQPKPGPQPRAL 35



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>DUSC_HAEDU (Q7VKU5) tRNA-dihydrouridine synthase C (EC 1.-.-.-)|
          Length = 325

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = -1

Query: 379 VPDLVGQAEAAEEGRVHGRRPRDGHVGALLEVRAVGRLGRR 257
           + D + QA  A+E  VHGR  +DG+    +  +A+G++ +R
Sbjct: 158 IADAIQQA-GADEITVHGRTKQDGYRAERINWQAIGQIQQR 197



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>WN10B_MOUSE (P48614) Protein Wnt-10b precursor (Wnt-12)|
          Length = 389

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = +1

Query: 1   AAAATLGRAASCGCGVQPRPEVQR----GVQLRRLDHGHGQPVHE 123
           A A +LG+  SCGCG +   E  R     +QL+ L  G   P+ +
Sbjct: 133 ATACSLGKLVSCGCGWKGSGEQDRLRAKLLQLQALSRGKTFPISQ 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,604,661
Number of Sequences: 219361
Number of extensions: 878429
Number of successful extensions: 3211
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3209
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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