ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast58c08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_194108.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.0
2ref|XM_475067.1| Oryza sativa (japonica cultivar-group), predic... 40 2.0
3gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete ge... 40 2.0
4gb|AF078726.2| Bovine herpesvirus 5 strain N565 glycoprotein B g... 40 2.0
5gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 2.0
6gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 2.0
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
9dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
10dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
11gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome... 40 2.0
12ref|XM_482849.1| Oryza sativa (japonica cultivar-group), mRNA 38 8.0
13ref|XM_480532.1| Oryza sativa (japonica cultivar-group), mRNA 38 8.0
14ref|XM_480529.1| Oryza sativa (japonica cultivar-group), mRNA 38 8.0
15ref|XM_474459.1| Oryza sativa (japonica cultivar-group), predic... 38 8.0
16gb|AY657966.1| Synthetic construct Peudomonas aeruginosa clone F... 38 8.0
17ref|XM_798480.1| Trypanosoma brucei TREU927 hypothetical protein... 38 8.0
18ref|XM_747722.1| Aspergillus fumigatus Af293 exo-beta-1,3-glucan... 38 8.0
19gb|AC130219.3| Mus musculus BAC clone RP23-126O16 from chromosom... 38 8.0
20gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 38 8.0
21gb|AC155168.3| Mus musculus BAC clone RP23-208M17 from chromosom... 38 8.0
22emb|BX649607.1| Aspergillus fumigatus BAC pilot project supercon... 38 8.0
23emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 38 8.0
24emb|BX640431.1| Bordetella parapertussis strain 12822, complete ... 38 8.0
25emb|BX640419.1| Bordetella pertussis strain Tohama I, complete g... 38 8.0
26emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 38 8.0
27emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207... 38 8.0
28gb|AE014175.1| Mus musculus piebald deletion region section 3 of... 38 8.0
29gb|AC021642.14| Mus musculus chromosome 10 clone RP23-113O5, co... 38 8.0
30gb|AC096863.5| Genomic sequence for Mus musculus, clone RP23-110... 38 8.0
31gb|CP000249.1| Frankia sp. CcI3, complete genome 38 8.0
32dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.0
33dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.0
34dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.0
35gb|AC158237.2| Mus musculus BAC clone RP23-142I8 from chromosome... 38 8.0
36gb|AE004935.1| Pseudomonas aeruginosa PAO1, section 496 of 529 o... 38 8.0
37gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 38 8.0
38dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic D... 38 8.0
39dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.0
40dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.0
41dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.0
42dbj|AK109710.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.0
43dbj|AK106882.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.0
44dbj|AK105641.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.0
45dbj|AK102046.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.0
46dbj|AP001729.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 8.0
47gb|AC114410.9| Mus musculus chromosome 14, clone RP23-151K8, com... 38 8.0
48emb|BX000705.13| Zebrafish DNA sequence from clone DKEY-76D18, c... 38 8.0
49gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 38 8.0
50emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4,... 38 8.0
51dbj|AP000156.1| Homo sapiens genomic DNA, chromosome 21q22.2, DS... 38 8.0
52dbj|AP000014.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrom... 38 8.0
53dbj|AP001436.1| Homo sapiens genomic DNA, chromosome 21q22.2, cl... 38 8.0 
>ref|NM_194108.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1533

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 115 cgggtcgtacagcaactgcccgcc 138
           ||||||||||||| ||||||||||
Sbjct: 171 cgggtcgtacagccactgcccgcc 148
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>ref|XM_475067.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1020

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 85  cgccgtcgtcctgctcctgc 104
           ||||||||||||||||||||
Sbjct: 9   cgccgtcgtcctgctcctgc 28
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>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome
          Length = 138390

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    gcttgttggcgtcgccgtcg 92
             ||||||||||||||||||||
Sbjct: 58284 gcttgttggcgtcgccgtcg 58265
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>gb|AF078726.2| Bovine herpesvirus 5 strain N565 glycoprotein B gene, complete cds
          Length = 3113

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   gcttgttggcgtcgccgtcg 92
            ||||||||||||||||||||
Sbjct: 1893 gcttgttggcgtcgccgtcg 1874
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 26      ccactgaccggcgccatggcctgc 49
               |||| |||||||||||||||||||
Sbjct: 3625253 ccacagaccggcgccatggcctgc 3625276
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     cgtcctgctcctgccgggcg 110
              ||||||||||||||||||||
Sbjct: 902780 cgtcctgctcctgccgggcg 902761
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 115    cgggtcgtacagcaactgcccgcc 138
              ||||||||||||| ||||||||||
Sbjct: 684641 cgggtcgtacagccactgcccgcc 684618
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     cgccgtcgtcctgctcctgc 104
              ||||||||||||||||||||
Sbjct: 217063 cgccgtcgtcctgctcctgc 217082
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>dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1118_G09
          Length = 115815

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   cgggtcgtacagcaactgcccgcc 138
             ||||||||||||| ||||||||||
Sbjct: 23172 cgggtcgtacagccactgcccgcc 23149
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>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1513_F02
          Length = 126845

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 115  cgggtcgtacagcaactgcccgcc 138
            ||||||||||||| ||||||||||
Sbjct: 4448 cgggtcgtacagccactgcccgcc 4425
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>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12,
             complete sequence
          Length = 160603

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    cgccgtcgtcctgctcctgc 104
             ||||||||||||||||||||
Sbjct: 99247 cgccgtcgtcctgctcctgc 99266
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>ref|XM_482849.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 888

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 80  ggcgtcgccgtcgtcctgctcct 102
           |||| ||||||||||||||||||
Sbjct: 611 ggcgccgccgtcgtcctgctcct 589
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>ref|XM_480532.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1795

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  ttgttggcgtcgccgtcgt 93
           |||||||||||||||||||
Sbjct: 481 ttgttggcgtcgccgtcgt 463
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>ref|XM_480529.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1863

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  ttgttggcgtcgccgtcgt 93
           |||||||||||||||||||
Sbjct: 420 ttgttggcgtcgccgtcgt 402
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>ref|XM_474459.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2022

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 82  cgtcgccgtcgtcctgctcctgc 104
           |||| ||||||||||||||||||
Sbjct: 24  cgtctccgtcgtcctgctcctgc 46
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>gb|AY657966.1| Synthetic construct Peudomonas aeruginosa clone FLH046260.01F
           PA5225 gene, partial cds
          Length = 555

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 83  gtcgccgtcgtcctgctcctgcc 105
           |||||||||||| ||||||||||
Sbjct: 244 gtcgccgtcgtcatgctcctgcc 266
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>ref|XM_798480.1| Trypanosoma brucei TREU927 hypothetical protein (Tb09.160.1290)
            partial mRNA
          Length = 5760

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 8    cgctggcattgggatcgcc 26
            |||||||||||||||||||
Sbjct: 1276 cgctggcattgggatcgcc 1258
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>ref|XM_747722.1| Aspergillus fumigatus Af293 exo-beta-1,3-glucanase Exg0
           (Afu1g14450) partial mRNA
          Length = 2844

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 71  ctgcttgttggcgtcgccg 89
           |||||||||||||||||||
Sbjct: 666 ctgcttgttggcgtcgccg 648
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>gb|AC130219.3| Mus musculus BAC clone RP23-126O16 from chromosome 15, complete sequence
          Length = 224179

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 50     cttgccagagtctgctccc 68
              |||||||||||||||||||
Sbjct: 157678 cttgccagagtctgctccc 157696
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>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 86    gccgtcgtcctgctcctgc 104
             |||||||||||||||||||
Sbjct: 30062 gccgtcgtcctgctcctgc 30080
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>gb|AC155168.3| Mus musculus BAC clone RP23-208M17 from chromosome 10, complete
             sequence
          Length = 174112

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 50    cttgccagagtctgctccctcct 72
             |||||||||||||||||| ||||
Sbjct: 97032 cttgccagagtctgctccttcct 97010
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>emb|BX649607.1| Aspergillus fumigatus BAC pilot project supercontig; segment 3/3
          Length = 227448

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 71     ctgcttgttggcgtcgccg 89
              |||||||||||||||||||
Sbjct: 211356 ctgcttgttggcgtcgccg 211374
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>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 118   gtcgtacagcaactgcccgccgg 140
             ||||||||||| |||||||||||
Sbjct: 87231 gtcgtacagcacctgcccgccgg 87209
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>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14
          Length = 347894

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 118  gtcgtacagcaactgcccgccgg 140
            ||||||||||| |||||||||||
Sbjct: 3160 gtcgtacagcacctgcccgccgg 3138
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>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12
          Length = 349672

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 118    gtcgtacagcaactgcccgccgg 140
              ||||||||||| |||||||||||
Sbjct: 129987 gtcgtacagcacctgcccgccgg 130009
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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 90     tcgtcctgctcctgccgggcgcgcacg 116
              ||||||||||| ||||| |||||||||
Sbjct: 210873 tcgtcctgctcgtgccgtgcgcgcacg 210847
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>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome
          Length = 124321

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 82    cgtcgccgtcgtcctgctcctgc 104
             |||| ||||||||||||||||||
Sbjct: 55525 cgtctccgtcgtcctgctcctgc 55503
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>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete
              sequence
          Length = 404829

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 60     tctgctccctcctgcttgt 78
              |||||||||||||||||||
Sbjct: 287139 tctgctccctcctgcttgt 287121
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>gb|AC021642.14| Mus musculus chromosome 10 clone  RP23-113O5, containing myf5 and myf6,
              complete sequence
          Length = 203839

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 50     cttgccagagtctgctccctcct 72
              |||||||||||||||||| ||||
Sbjct: 203390 cttgccagagtctgctccttcct 203412
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>gb|AC096863.5| Genomic sequence for Mus musculus, clone RP23-110F14, from chromosome
             17, complete sequence
          Length = 134001

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    ctccctcctgcttgttggc 82
             |||||||||||||||||||
Sbjct: 36686 ctccctcctgcttgttggc 36704
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 82      cgtcgccgtcgtcctgctc 100
               |||||||||||||||||||
Sbjct: 5304366 cgtcgccgtcgtcctgctc 5304384
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 82       cgtcgccgtcgtcctgctcctgc 104
                |||| ||||||||||||||||||
Sbjct: 35306255 cgtctccgtcgtcctgctcctgc 35306277
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 80       ggcgtcgccgtcgtcctgctcct 102
                |||| ||||||||||||||||||
Sbjct: 22920640 ggcgccgccgtcgtcctgctcct 22920662



 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 75      ttgttggcgtcgccgtcgt 93
               |||||||||||||||||||
Sbjct: 5617939 ttgttggcgtcgccgtcgt 5617921



 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 75      ttgttggcgtcgccgtcgt 93
               |||||||||||||||||||
Sbjct: 5603497 ttgttggcgtcgccgtcgt 5603479
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 117      ggtcgtacagcaactgcccgccg 139
                ||||||||||| |||||||||||
Sbjct: 19273582 ggtcgtacagccactgcccgccg 19273604
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>gb|AC158237.2| Mus musculus BAC clone RP23-142I8 from chromosome 9, complete sequence
          Length = 179606

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    gccatggcctgccttgcca 56
             |||||||||||||||||||
Sbjct: 99976 gccatggcctgccttgcca 99994
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>gb|AE004935.1| Pseudomonas aeruginosa PAO1, section 496 of 529 of the complete
            genome
          Length = 14450

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 83   gtcgccgtcgtcctgctcctgcc 105
            |||||||||||| ||||||||||
Sbjct: 6749 gtcgccgtcgtcatgctcctgcc 6727
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 86     gccgtcgtcctgctcctgc 104
              |||||||||||||||||||
Sbjct: 299965 gccgtcgtcctgctcctgc 299947
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>dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0001B01
          Length = 147585

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 117    ggtcgtacagcaactgcccgccg 139
              ||||||||||| |||||||||||
Sbjct: 111346 ggtcgtacagccactgcccgccg 111368
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>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0104B02
          Length = 169588

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 80    ggcgtcgccgtcgtcctgctcct 102
             |||| ||||||||||||||||||
Sbjct: 94478 ggcgccgccgtcgtcctgctcct 94500
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>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0412D08
          Length = 150188

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 75    ttgttggcgtcgccgtcgt 93
             |||||||||||||||||||
Sbjct: 73315 ttgttggcgtcgccgtcgt 73297



 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 75    ttgttggcgtcgccgtcgt 93
             |||||||||||||||||||
Sbjct: 58873 ttgttggcgtcgccgtcgt 58855
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>dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0035F08
          Length = 167446

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 75     ttgttggcgtcgccgtcgt 93
              |||||||||||||||||||
Sbjct: 144167 ttgttggcgtcgccgtcgt 144149



 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 75     ttgttggcgtcgccgtcgt 93
              |||||||||||||||||||
Sbjct: 129725 ttgttggcgtcgccgtcgt 129707
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>dbj|AK109710.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-G12, full
           insert sequence
          Length = 1862

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  ttgttggcgtcgccgtcgt 93
           |||||||||||||||||||
Sbjct: 420 ttgttggcgtcgccgtcgt 402
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>dbj|AK106882.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-F04, full
           insert sequence
          Length = 1795

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  ttgttggcgtcgccgtcgt 93
           |||||||||||||||||||
Sbjct: 481 ttgttggcgtcgccgtcgt 463
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>dbj|AK105641.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-E08, full
           insert sequence
          Length = 1688

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 117 ggtcgtacagcaactgcccgccg 139
           ||||||||||| |||||||||||
Sbjct: 209 ggtcgtacagccactgcccgccg 187
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>dbj|AK102046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081N02, full
           insert sequence
          Length = 2629

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 82  cgtcgccgtcgtcctgctcctgc 104
           |||| ||||||||||||||||||
Sbjct: 82  cgtctccgtcgtcctgctcctgc 104
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>dbj|AP001729.1| Homo sapiens genomic DNA, chromosome 21q, section 73/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 39     ccatggcctgccttgccag 57
              |||||||||||||||||||
Sbjct: 206156 ccatggcctgccttgccag 206138
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>gb|AC114410.9| Mus musculus chromosome 14, clone RP23-151K8, complete sequence
          Length = 201783

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 60     tctgctccctcctgcttgt 78
              |||||||||||||||||||
Sbjct: 158934 tctgctccctcctgcttgt 158916
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>emb|BX000705.13| Zebrafish DNA sequence from clone DKEY-76D18, complete sequence
          Length = 255779

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     gccttgccagagtctgctc 66
              |||||||||||||||||||
Sbjct: 184665 gccttgccagagtctgctc 184683
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 83     gtcgccgtcgtcctgctcc 101
              |||||||||||||||||||
Sbjct: 740939 gtcgccgtcgtcctgctcc 740921
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>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24,
              complete sequence
          Length = 173770

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 82     cgtcgccgtcgtcctgctcctgc 104
              |||| ||||||||||||||||||
Sbjct: 102100 cgtctccgtcgtcctgctcctgc 102122
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>dbj|AP000156.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone
             D47-S479, segment 8/16, complete sequence
          Length = 100000

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 39    ccatggcctgccttgccag 57
             |||||||||||||||||||
Sbjct: 14573 ccatggcctgccttgccag 14555
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>dbj|AP000014.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 7/13
          Length = 302521

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 39    ccatggcctgccttgccag 57
             |||||||||||||||||||
Sbjct: 51490 ccatggcctgccttgccag 51472
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>dbj|AP001436.1| Homo sapiens genomic DNA, chromosome 21q22.2, clone:T556, LB7T-ERG
             region, complete sequence
          Length = 76163

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 39    ccatggcctgccttgccag 57
             |||||||||||||||||||
Sbjct: 27566 ccatggcctgccttgccag 27548


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 987,965
Number of Sequences: 3902068
Number of extensions: 987965
Number of successful extensions: 86472
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85712
Number of HSP's gapped (non-prelim): 760
length of query: 165
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 143
effective length of database: 17,147,199,772
effective search space: 2452049567396
effective search space used: 2452049567396
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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