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-Barley Genetic Resources Database-
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| Clone Name | bast58c02 |
|---|---|
| Clone Library Name | barley_pub |
>B3G2P_DROME (Q9VTG7) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase P (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase P) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-glucuronosyltransferase-P) (DmGlcAT-BSII) Length = 479 Score = 48.9 bits (115), Expect = 6e-06 Identities = 29/110 (26%), Positives = 48/110 (43%) Frame = +2 Query: 50 HVEKHRLSGVVHFADAAGVYDTHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPMCSASK 229 ++ +H GV++FAD YD F+++R I WPV ++ K V P+ A K Sbjct: 319 YLREHATEGVLYFADDDNTYDISIFEQMRYISKVAMWPVGLVT----KTGVSSPIIQAGK 374 Query: 230 VVGWFSRNFNDGTTRSVTYNTEVDLNPAGAAGTRAHTIDVSGFAFNSSIL 379 +VG++ G G R + +D++GFA + L Sbjct: 375 LVGYYD----------------------GWIGGRKYPVDMAGFAVSVKFL 402
>B3GA2_CANFA (Q5CAZ6) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 329 Score = 40.4 bits (93), Expect = 0.002 Identities = 27/110 (24%), Positives = 39/110 (35%) Frame = +2 Query: 50 HVEKHRLSGVVHFADAAGVYDTHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPMCSASK 229 H + GV+ FAD Y F E+R WPV + E P+ K Sbjct: 177 HQHQRAQPGVLFFADDDNTYSLELFQEMRTTRKVSVWPVGLVGGRR----YERPLVENGK 232 Query: 230 VVGWFSRNFNDGTTRSVTYNTEVDLNPAGAAGTRAHTIDVSGFAFNSSIL 379 VVGW++ G R ID++GFA + ++ Sbjct: 233 VVGWYT----------------------GWRADRPFAIDMAGFAVSLQVI 260
>B3GA2_HUMAN (Q9NPZ5) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 323 Score = 40.4 bits (93), Expect = 0.002 Identities = 27/110 (24%), Positives = 39/110 (35%) Frame = +2 Query: 50 HVEKHRLSGVVHFADAAGVYDTHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPMCSASK 229 H + GV+ FAD Y F E+R WPV + E P+ K Sbjct: 171 HQHQRAQPGVLFFADDDNTYSLELFQEMRTTRKVSVWPVGLVGGRR----YERPLVENGK 226 Query: 230 VVGWFSRNFNDGTTRSVTYNTEVDLNPAGAAGTRAHTIDVSGFAFNSSIL 379 VVGW++ G R ID++GFA + ++ Sbjct: 227 VVGWYT----------------------GWRADRPFAIDMAGFAVSLQVI 254
>B3GA1_CANFA (Q5CB03) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 335 Score = 39.3 bits (90), Expect = 0.005 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +2 Query: 74 GVVHFADAAGVYDTHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPMCS-ASKVVGW 241 GVV+FAD Y F+E+R WPVA + + E P + A KVVGW Sbjct: 190 GVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGG----LRYEAPRVNGAGKVVGW 242
>B3GA1_RAT (O35789) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 334 Score = 39.3 bits (90), Expect = 0.005 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +2 Query: 74 GVVHFADAAGVYDTHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPMCS-ASKVVGW 241 GVV+FAD Y F+E+R WPVA + + E P + A KVVGW Sbjct: 189 GVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGG----LRYEAPRVNGAGKVVGW 241
>B3GA1_MOUSE (Q9CW73) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 334 Score = 39.3 bits (90), Expect = 0.005 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +2 Query: 74 GVVHFADAAGVYDTHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPMCS-ASKVVGW 241 GVV+FAD Y F+E+R WPVA + + E P + A KVVGW Sbjct: 189 GVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGG----LRYEAPRVNGAGKVVGW 241
>B3GA2_RAT (Q9Z137) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 324 Score = 39.3 bits (90), Expect = 0.005 Identities = 20/66 (30%), Positives = 27/66 (40%) Frame = +2 Query: 50 HVEKHRLSGVVHFADAAGVYDTHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPMCSASK 229 H + GV+ FAD Y F E+R WPV + E P+ K Sbjct: 172 HQHQSAQPGVLFFADDDNTYSLELFQEMRTTRKVSVWPVGLVGGRR----YERPLVKNGK 227 Query: 230 VVGWFS 247 VVGW++ Sbjct: 228 VVGWYT 233
>B3GA2_MOUSE (P59270) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 324 Score = 39.3 bits (90), Expect = 0.005 Identities = 20/66 (30%), Positives = 27/66 (40%) Frame = +2 Query: 50 HVEKHRLSGVVHFADAAGVYDTHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPMCSASK 229 H + GV+ FAD Y F E+R WPV + E P+ K Sbjct: 172 HQHQSAQPGVLFFADDDNTYSLELFQEMRTTRKVSVWPVGLVGGRR----YERPLVKNGK 227 Query: 230 VVGWFS 247 VVGW++ Sbjct: 228 VVGWYT 233
>B3GA3_HUMAN (O94766) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 3 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 3) (Glucuronosyltransferase-I) (GlcAT-I) (UDP-GlcUA:Gal beta-1,3-Gal-R glucuronyltransferase) (GlcUAT-I) Length = 335 Score = 37.4 bits (85), Expect = 0.019 Identities = 19/56 (33%), Positives = 26/56 (46%) Frame = +2 Query: 74 GVVHFADAAGVYDTHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPMCSASKVVGW 241 GVV+FAD Y F+E+R WPV + + EGP +VVG+ Sbjct: 188 GVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVGG----LRFEGPQVQDGRVVGF 239
>SQV8_CAEEL (Q09363) Probable glucuronosyltransferase sqv-8 (EC 2.4.1.135)| (Vulval invagination protein sqv-8) (Squashed vulva protein 8) Length = 356 Score = 36.6 bits (83), Expect = 0.033 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = +2 Query: 74 GVVHFADAAGVYDTHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPMCSASKVVGWFS 247 GVV+F D YD F E+R+++ G WPV + + VE P+ + + F+ Sbjct: 200 GVVYFGDDDNTYDLKIFGEMRKVKNAGVWPVGIVGG----MFVETPILEKNGSISHFN 253
>B3GA3_MOUSE (P58158) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 3 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 3) (Glucuronosyltransferase-I) (GlcAT-I) (UDP-GlcUA:Gal Beta-1,3-Gal-R glucuronyltransferase) (GlcUAT-I) Length = 335 Score = 36.2 bits (82), Expect = 0.043 Identities = 19/56 (33%), Positives = 25/56 (44%) Frame = +2 Query: 74 GVVHFADAAGVYDTHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPMCSASKVVGW 241 GVV+FAD Y F E+R WPV + + EGP +VVG+ Sbjct: 188 GVVYFADDDNTYSRELFKEMRWTRGVSVWPVGLVGG----LRFEGPQVQDGRVVGF 239
>B3GA1_HUMAN (Q9P2W7) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 334 Score = 36.2 bits (82), Expect = 0.043 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +2 Query: 74 GVVHFADAAGVYDTHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPMCS-ASKVVGW 241 GVV+FAD Y F+E+R WPVA + + E P + A KVV W Sbjct: 189 GVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGG----LRYEAPRVNGAGKVVRW 241
>B3GA3_CRIGR (Q9WU47) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 3 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 3) (Glucuronosyltransferase-I) (GlcAT-I) (UDP-GlcUA:Gal Beta-1,3-Gal-R glucuronyltransferase) (GlcUAT-I) Length = 335 Score = 35.8 bits (81), Expect = 0.057 Identities = 19/56 (33%), Positives = 25/56 (44%) Frame = +2 Query: 74 GVVHFADAAGVYDTHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPMCSASKVVGW 241 GVV+FAD Y F E+R WPV + + EGP +VVG+ Sbjct: 188 GVVYFADDDNTYSRELFKEMRWTRGVSVWPVGLVGG----LRFEGPRVQDGRVVGF 239
>B3G2S_DROME (Q9VLA1) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase S (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase S) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (DmGlcAT-BSI) Length = 409 Score = 34.7 bits (78), Expect = 0.13 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Frame = +2 Query: 53 VEKHRLS-GVVHFADAAGVYDTHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPMCSASK 229 + +H L+ G+++F D YD F EIR+ + +PV ++ V GP+ K Sbjct: 219 IRQHNLTNGILYFGDDDNTYDLRLFSEIRKTQRVSMFPVGLIA----DYGVSGPVVRKGK 274 Query: 230 VVGW 241 VV + Sbjct: 275 VVAF 278
>NRBP_PONPY (Q5RBH9) Nuclear receptor-binding protein| Length = 535 Score = 32.7 bits (73), Expect = 0.48 Identities = 20/56 (35%), Positives = 27/56 (48%) Frame = -2 Query: 408 VGRPHRSGSHKIELLKANPDTSIVWARVPAAPAGFKSTSVLYVTERVVPSLKFLEN 241 VG H + +E + N DTS V A +PA P G + LY + KFLE+ Sbjct: 342 VGHQHMIPENALEEITKNMDTSAVLAEIPAGP-GREPVQTLYSQSPALELDKFLED 396
>NRBP_MOUSE (Q99J45) Nuclear receptor-binding protein (MLF1 adapter molecule)| (HLS7-interacting protein kinase) Length = 535 Score = 32.7 bits (73), Expect = 0.48 Identities = 20/56 (35%), Positives = 27/56 (48%) Frame = -2 Query: 408 VGRPHRSGSHKIELLKANPDTSIVWARVPAAPAGFKSTSVLYVTERVVPSLKFLEN 241 VG H + +E + N DTS V A +PA P G + LY + KFLE+ Sbjct: 342 VGHQHMIPENALEEITKNMDTSAVLAEIPAGP-GREPVQTLYSQSPALELDKFLED 396
>NRBP_MACFA (Q4R8X0) Nuclear receptor-binding protein| Length = 535 Score = 32.7 bits (73), Expect = 0.48 Identities = 20/56 (35%), Positives = 27/56 (48%) Frame = -2 Query: 408 VGRPHRSGSHKIELLKANPDTSIVWARVPAAPAGFKSTSVLYVTERVVPSLKFLEN 241 VG H + +E + N DTS V A +PA P G + LY + KFLE+ Sbjct: 342 VGHQHMIPENALEEITKNMDTSAVLAEIPAGP-GREPVQTLYSQSPALELDKFLED 396
>NRBP_HUMAN (Q9UHY1) Nuclear receptor-binding protein| Length = 535 Score = 32.7 bits (73), Expect = 0.48 Identities = 20/56 (35%), Positives = 27/56 (48%) Frame = -2 Query: 408 VGRPHRSGSHKIELLKANPDTSIVWARVPAAPAGFKSTSVLYVTERVVPSLKFLEN 241 VG H + +E + N DTS V A +PA P G + LY + KFLE+ Sbjct: 342 VGHQHMIPENALEEITKNMDTSAVLAEIPAGP-GREPVQTLYSQSPALELDKFLED 396
>LRC40_XENTR (Q5M8G4) Leucine-rich repeat-containing protein 40| Length = 605 Score = 32.3 bits (72), Expect = 0.63 Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 3/100 (3%) Frame = -2 Query: 471 LSSSTTSCTNLIESWEVSGNDVGRPHRSGSHKIELLKANPDTSIVWARVPAAPAGFKSTS 292 +SSS T L++ S P G K++ LK TS + VPA+ AG +S Sbjct: 189 ISSSVGQLTGLVKFNLSSNKLTALPTEIG--KMKNLKQLDCTSNLLENVPASVAGMESLE 246 Query: 291 VLYVTER---VVPSLKFLENQPTTFEALHIGPSTTTFFSP 181 LY+ + +P L FL T + LH+G + P Sbjct: 247 QLYLRQNKLTYLPELPFL----TKLKELHVGNNQIQTLGP 282
>Y793_METTH (O26884) Hypothetical protein MTH793| Length = 383 Score = 32.0 bits (71), Expect = 0.82 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +2 Query: 248 RNFNDGTTRSVTYNTEVDLNPAGAAGTRAHTIDVSGFAFNSSILW 382 R F DG TR + ++ +NP+G R H + +G A + ++W Sbjct: 306 RAFEDGMTR---IDGDIPVNPSGGLKARGHPLGATGIAQAAEVVW 347
>FA43B_HUMAN (Q6ZT52) Protein FAM43B| Length = 329 Score = 30.8 bits (68), Expect = 1.8 Identities = 19/46 (41%), Positives = 25/46 (54%) Frame = -2 Query: 471 LSSSTTSCTNLIESWEVSGNDVGRPHRSGSHKIELLKANPDTSIVW 334 LSS SC +L+ W + +GR RS K+EL K +P T VW Sbjct: 33 LSSFLRSCPDLLPDWPLER--LGRVFRSRRQKVELNKEDP-TYTVW 75
>LRC40_XENLA (Q6GPJ5) Leucine-rich repeat-containing protein 40| Length = 605 Score = 30.8 bits (68), Expect = 1.8 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 3/100 (3%) Frame = -2 Query: 471 LSSSTTSCTNLIESWEVSGNDVGRPHRSGSHKIELLKANPDTSIVWARVPAAPAGFKSTS 292 +SSS T L++ S P G K++ L+ TS + VPA+ AG +S Sbjct: 189 VSSSVGQLTGLVKFNLSSNKLTALPTEIG--KMKNLRQLDCTSNLLENVPASVAGMESLE 246 Query: 291 VLYVTER---VVPSLKFLENQPTTFEALHIGPSTTTFFSP 181 LY+ + +P L FL T + LH+G + P Sbjct: 247 QLYLRQNKLTYLPELPFL----TKLKELHVGNNQIQTLGP 282
>ALS3_CANAL (O74623) Agglutinin-like protein 3 precursor| Length = 1119 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/79 (26%), Positives = 35/79 (44%) Frame = -2 Query: 399 PHRSGSHKIELLKANPDTSIVWARVPAAPAGFKSTSVLYVTERVVPSLKFLENQPTTFEA 220 P+R + IE+LK P T+I + V + T+ + T V+ + + T + Sbjct: 348 PNRDKTKTIEILKPIPTTTITTSYVGVTTSYSTKTAPIGETATVIVDIPYHTTTTVTSKW 407 Query: 219 LHIGPSTTTFFSPADIVAT 163 STTT +P D + T Sbjct: 408 TGTITSTTTHTNPTDSIDT 426
>B3GA1_PANTR (Q5CB04) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 332 Score = 30.4 bits (67), Expect = 2.4 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +2 Query: 74 GVVHFADAAGVYDTHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPMCS-ASKVVGW 241 GVV+FAD Y F ++ + WPVA + + E P + A KVVGW Sbjct: 189 GVVYFADDDNPYSLELFQKVTR--RVSVWPVAFVGG----LRYEAPRVNGAGKVVGW 239
>ADH1_ENTHI (P35630) NADP-dependent alcohol dehydrogenase (EC 1.1.1.2)| Length = 360 Score = 30.4 bits (67), Expect = 2.4 Identities = 18/51 (35%), Positives = 22/51 (43%) Frame = +2 Query: 161 PVATMSAGEKKVVVEGPMCSASKVVGWFSRNFNDGTTRSVTYNTEVDLNPA 313 P T GE++ PM S + GW NF DG V + E D N A Sbjct: 84 PAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFSEVFHVNEADANLA 134
>YFGG_SCHPO (O13854) Hypothetical serine/threonine-rich protein C19G12.16c| precursor Length = 670 Score = 30.4 bits (67), Expect = 2.4 Identities = 26/132 (19%), Positives = 55/132 (41%), Gaps = 4/132 (3%) Frame = -2 Query: 462 STTSCTNLIESWEVSGNDVGRPHRSGSHKIELLKANPDTSIVWARVPAAPAGFKSTSVLY 283 S++S ++ S+ + G +GS + ++S++ VP++ + F S+S Y Sbjct: 260 SSSSLSSFTPSYSTNLTTTGSTTTTGSATVSSSPFYSNSSVIPTSVPSSVSSFTSSSSSY 319 Query: 282 VTERVVPSLKFLENQPTTFEALHIGPSTTT----FFSPADIVATGHVPNASIWRISSKKW 115 T N T+ G +T T F+S + ++ T + S + S+ + Sbjct: 320 TTTLTA------SNTSVTYTGTGTGSATFTSSPPFYSNSSVIPTSVPSSVSSFTSSNSSY 373 Query: 114 VS*TPAASAKWT 79 + A++ T Sbjct: 374 TTTLTASNTSIT 385
>SIX5_MOUSE (P70178) Homeobox protein SIX5 (DM locus-associated homeodomain| protein homolog) Length = 719 Score = 29.6 bits (65), Expect = 4.1 Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 3/104 (2%) Frame = -2 Query: 462 STTSCTNLIESWEVSGNDVGRPHRSGSHKIELLKANPDTSIVWARVPAAPA---GFKSTS 292 S+T+ N + + VSG+ + KI L P + +V +P AP+ K Sbjct: 519 SSTAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPSLALPLKQEP 578 Query: 291 VLYVTERVVPSLKFLENQPTTFEALHIGPSTTTFFSPADIVATG 160 + V E +P + PT E +GP +T PA +V +G Sbjct: 579 AITVPEGALP----VGPSPTLPEGHTLGPISTQPLPPASVVTSG 618
>Y865_TREPA (O83837) Hypothetical UPF0164 protein TP0865 precursor| Length = 479 Score = 29.3 bits (64), Expect = 5.3 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Frame = +2 Query: 182 GEKKVVVEGPM-----CSASKVVGWFSRN-FNDGTTRSVTYNTEVDLNPAGAAGTRAHTI 343 G+K VVV + S +K G N + GT ++V + EVD + +G++ + T+ Sbjct: 241 GKKHVVVTADIGLQGTWSVAKNFGSHEPNLWVGGTVKNVGLSVEVDASNSGSSMSGGRTV 300 Query: 344 DVSGFAFNSSILWDPERW 397 + +F + + P RW Sbjct: 301 HATNSSFILACAYQPIRW 318
>GSHR_PSEAE (P23189) Glutathione reductase (EC 1.8.1.7) (GR) (GRase)| Length = 451 Score = 29.3 bits (64), Expect = 5.3 Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 3/108 (2%) Frame = +2 Query: 104 VYDTHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPMCSASKVVGWFSRNFN--DGTTRS 277 VY HF ++ Q A+G W SAGE + + ++G +R +G R+ Sbjct: 54 VYGAHFSEDFEQARAYG-W-----SAGEAQF-------DWATLIGNKNREIQRLNGIYRN 100 Query: 278 VTYNTEVDLNPAGAAGTRAHTIDVSGFAFNSS-ILWDPERWGRPTSLP 418 + N+ V L A AH+++V G F++ IL W + +P Sbjct: 101 LLVNSGVTLLEGHARLLDAHSVEVDGQRFSAKHILVATGGWPQVPDIP 148
>THIO_HORSE (O97508) Thioredoxin| Length = 104 Score = 28.9 bits (63), Expect = 6.9 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = +2 Query: 131 IRQIEAFGTWPVATMSAGEKKVVVE--GPMCSASKVVGWFSRNFNDGTTRSVTYNTEVD 301 ++QIE+ + A SAGEK VVV+ C K++ F + ++ + V +VD Sbjct: 1 VKQIESKSAFQEALNSAGEKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVD 59
>TERL_BPP21 (P36693) Terminase large subunit (Gp2)| Length = 642 Score = 28.9 bits (63), Expect = 6.9 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Frame = +2 Query: 239 WFSRNFNDGTTRSVTYNTEVD---LNPAGAAGTRAHTIDVSGFAFNSSILWDPERWGRPT 409 WF R D T +++ V L A A R ++DV + SS D E+ G PT Sbjct: 135 WFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPT 194 Query: 410 SLPD 421 L D Sbjct: 195 LLGD 198
>PGTA_MOUSE (Q9JHK4) Geranylgeranyl transferase type-2 alpha subunit (EC| 2.5.1.60) (Geranylgeranyl transferase type II alpha subunit) (Rab geranylgeranyltransferase alpha subunit) (Rab geranyl-geranyltransferase alpha subunit) (Rab GG transferase alpha) ( Length = 567 Score = 28.9 bits (63), Expect = 6.9 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +1 Query: 316 CCWHASPHDRCIGVCFQQFYFVG 384 CC H S + C+ VCF + VG Sbjct: 246 CCLHVSREEACLSVCFSRPLIVG 268
>IAA13_ARATH (Q38831) Auxin-responsive protein IAA13 (Indoleacetic acid-induced| protein 13) Length = 247 Score = 28.9 bits (63), Expect = 6.9 Identities = 23/87 (26%), Positives = 35/87 (40%) Frame = +2 Query: 179 AGEKKVVVEGPMCSASKVVGWFSRNFNDGTTRSVTYNTEVDLNPAGAAGTRAHTIDVSGF 358 AG+KKV + P KV G F V +VDLN + A T++ F Sbjct: 106 AGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFF 165 Query: 359 AFNSSILWDPERWGRPTSLPDTSQDSI 439 N + ++ +P L D S + + Sbjct: 166 RTNPGTVGLTSQFTKPLRLLDGSSEFV 192
>ENGB_BACSU (P38424) Probable GTP-binding protein engB| Length = 195 Score = 28.9 bits (63), Expect = 6.9 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = +2 Query: 335 HTIDVSGFAFNSSILWDPERWGRPTSLPDTSQDSIKFVQEVV 460 H +DV G+ F + E WGR T+++ +K V ++V Sbjct: 72 HFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIV 113
>DPOE_CANGA (Q6FNY7) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)| (DNA polymerase II subunit A) Length = 2217 Score = 28.5 bits (62), Expect = 9.1 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%) Frame = +2 Query: 299 DLNP--AGAAGTRAHTIDVSGFAFNSSILWDP 388 D NP AG AG + +D G +F SSI +DP Sbjct: 88 DYNPSAAGIAGVDFYFLDEEGGSFKSSITYDP 119
>RFA1_CRIFA (Q23696) Replication factor A 51 kDa subunit (RP-A) (RF-A)| (Replication factor-A protein 1) (Single-stranded DNA-binding protein P51 subunit) Length = 467 Score = 28.5 bits (62), Expect = 9.1 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +2 Query: 260 DGTTRSVTYNTEVDLNPA 313 DG T S TY T++D+NPA Sbjct: 215 DGVTLSSTYQTKIDVNPA 232 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,692,677 Number of Sequences: 219361 Number of extensions: 1330843 Number of successful extensions: 4471 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 4292 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4460 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
